| Clone Name | FLbaf28l24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009476.1| Triticum aestivum clone wr1.pk0033.c11:fis, full insert mRNA sequence Length = 969 Score = 850 bits (429), Expect = 0.0 Identities = 617/677 (91%), Gaps = 2/677 (0%) Strand = Plus / Plus Query: 178 ggcgctgctcaaggtttacgcggaccgtctttcgcagccgtcgcgcgcggtgatcatctt 237 |||| |||| ||||| ||||||||||| || ||||||||||||||||| | |||||||| Sbjct: 56 ggcggtgctgaaggtgtacgcggaccggctgtcgcagccgtcgcgcgccatcatcatctt 115 Query: 238 gtgcaaggccaaccggatcgatttcgaggaggtcaaagtggatctggcaaagggacaaca 297 |||||||| |||||||||||| ||| ||||| ||| |||||||| || ||||||||||| Sbjct: 116 gtgcaaggtcaaccggatcgacttccaggagctcaccgtggatctcgccaagggacaaca 175 Query: 298 ccgacgc-caagaattcaacaagatcaacccgatgggacaggtcccagcaatcatcgatg 356 ||| ||| | ||| |||| ||| |||||||| |||| ||||||||| ||||| |||||| Sbjct: 176 ccg-cgcaccagagttcaccaaaatcaaccccatggcgcaggtcccaacaatcgtcgatg 234 Query: 357 gaagattcaaactattcgaaagccatgccatcctgaggtatctcgccaccgtcttccccg 416 ||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 235 gaagattcaaactctttgaaagtcatgccattctgaggtatctcgccaccgtcttccccg 294 Query: 417 gagtcccggaccactggtatccagccgacttatttaccagagctaagctcgagtccgtct 476 | || || | |||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 295 gggttccacatcactggtatccagccgacttatttaccagagcaaaactcgagtccgtct 354 Query: 477 tggattggcatcactctaatctgcgccgtggtgcagcatcctatgtactgcacaccgcgt 536 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 355 tggattggcatcactctaatctgcgccgtggtgcagcaacctatgtactgcacaccgcgt 414 Query: 537 tgggtcctgctctcggtctcacacccaatcctgagaccgcaaaagagggcgagaagttgc 596 |||||||||||||||| |||||||||| ||||||| | |||||||||| ||||||||||| Sbjct: 415 tgggtcctgctctcggcctcacacccagtcctgaggctgcaaaagaggccgagaagttgc 474 Query: 597 tgtcaaaatcactgggaacgatcgaaacggtgtggctcaaaggcgatgcaaaattcttga 656 ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 475 tgtcacgatcactgggaacgatcgaaaccgtgtggctcaaaggcgatgccaaattcttga 534 Query: 657 atggcaacccccagccatcgatcgcagacctcagcctcgtgtgcgagataatgcagctgg 716 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 535 atggcaacccccagccatccatcgcagacctcagccttgtgtgcgagataatgcagctgg 594 Query: 717 aggttgtcggtgatgagagacgtgacacaattctaggacctcatgagaaggtccgtgctt 776 ||||||| ||||| ||||||||||||| |||||| ||||||||||||||||| ||||||| Sbjct: 595 aggttgttggtgacgagagacgtgacagaattctgggacctcatgagaaggttcgtgctt 654 Query: 777 ggatggagaatgtgaagaaggccaccaaccctcatttcgatgaagtccatcagctcatct 836 ||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||||||||| Sbjct: 655 ggatggagaatgtgaagaaggccaccagccctcattttgatcaagttcatcagctcatct 714 Query: 837 tcaaattgaaggcgcgc 853 ||||| ||||||||||| Sbjct: 715 tcaaactgaaggcgcgc 731 Score = 48.1 bits (24), Expect = 0.063 Identities = 30/32 (93%) Strand = Plus / Plus Query: 877 cttgaaaccaccatccaagctctgaacacatt 908 |||||| ||| ||||||||||||||||||||| Sbjct: 731 cttgaacccagcatccaagctctgaacacatt 762
>gb|BT009196.1| Triticum aestivum clone wle1n.pk0001.d6:fis, full insert mRNA sequence Length = 1012 Score = 842 bits (425), Expect = 0.0 Identities = 616/677 (90%), Gaps = 2/677 (0%) Strand = Plus / Plus Query: 178 ggcgctgctcaaggtttacgcggaccgtctttcgcagccgtcgcgcgcggtgatcatctt 237 |||| |||||||||| || |||||||| || ||||||||||||||||| | |||||||| Sbjct: 123 ggcggtgctcaaggtgtatgcggaccggctgtcgcagccgtcgcgcgccatcatcatctt 182 Query: 238 gtgcaaggccaaccggatcgatttcgaggaggtcaaagtggatctggcaaagggacaaca 297 |||||||| |||||||||||| ||| ||||| ||| |||||||| || ||||||||||| Sbjct: 183 gtgcaaggtcaaccggatcgacttccaggagctcaccgtggatctcgccaagggacaaca 242 Query: 298 ccgacgc-caagaattcaacaagatcaacccgatgggacaggtcccagcaatcatcgatg 356 ||| ||| | |||||||| ||| |||||||| |||| |||||||||| ||||| |||||| Sbjct: 243 ccg-cgcaccagaattcaccaaaatcaaccccatggcacaggtcccaacaatcgtcgatg 301 Query: 357 gaagattcaaactattcgaaagccatgccatcctgaggtatctcgccaccgtcttccccg 416 ||||||||||||| || |||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 302 gaagattcaaactctttgaaagccatgccattctgaggtatcttgccaccgtcttccccg 361 Query: 417 gagtcccggaccactggtatccagccgacttatttaccagagctaagctcgagtccgtct 476 | || || || ||||||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 362 gggttccagatcactggtatccggccgacttatttaccagagcaaaactcgagtctgtct 421 Query: 477 tggattggcatcactctaatctgcgccgtggtgcagcatcctatgtactgcacaccgcgt 536 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 422 tggattggcatcactctaatctgcgccgtggtgcagcaacctatgtactgcacaccgcgt 481 Query: 537 tgggtcctgctctcggtctcacacccaatcctgagaccgcaaaagagggcgagaagttgc 596 |||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||| Sbjct: 482 tgggtcctgctctcggcctcacaccgaatcctgaaaccgcaaaagaggccgagaagttgc 541 Query: 597 tgtcaaaatcactgggaacgatcgaaacggtgtggctcaaaggcgatgcaaaattcttga 656 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 542 tgtcgcgatcactgggaacgatcgaaaccgtgtggctcaaaggcgatgcaaaattcttga 601 Query: 657 atggcaacccccagccatcgatcgcagacctcagcctcgtgtgcgagataatgcagctgg 716 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 602 atggcaacccccagccatcaatcgcagacctcagcctcgtgtgcgagataatgcagctgg 661 Query: 717 aggttgtcggtgatgagagacgtgacacaattctaggacctcatgagaaggtccgtgctt 776 ||||||| ||||||||| ||||||||| |||||| |||||||| || ||||| || |||| Sbjct: 662 aggttgttggtgatgagcgacgtgacagaattctgggacctcacgacaaggtgcgcgctt 721 Query: 777 ggatggagaatgtgaagaaggccaccaaccctcatttcgatgaagtccatcagctcatct 836 ||||||||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||| Sbjct: 722 ggatggagaatgtgaagaaggccaccagccctcattttgatgaggtccatgagctcatct 781 Query: 837 tcaaattgaaggcgcgc 853 ||||| | ||||||||| Sbjct: 782 tcaaactcaaggcgcgc 798
>ref|NM_001074707.1| Oryza sativa (japonica cultivar-group) Os11g0588300 (Os11g0588300) mRNA, complete cds Length = 1169 Score = 123 bits (62), Expect = 1e-24 Identities = 197/242 (81%) Strand = Plus / Plus Query: 308 gaattcaacaagatcaacccgatgggacaggtcccagcaatcatcgatggaagattcaaa 367 |||||||| ||||| ||||| ||||||||||| ||||||||| | ||||| |||||| | Sbjct: 281 gaattcaagaagataaacccaatgggacaggtgccagcaatcgttgatgggcgattcaga 340 Query: 368 ctattcgaaagccatgccatcctgaggtatctcgccaccgtcttccccggagtcccggac 427 | || || ||||||||||| ||||||||||| || || || ||||| ||||| | || Sbjct: 341 ttgtttgagagccatgccattctgaggtatcttgcaacggtgttccctggagttgcagat 400 Query: 428 cactggtatccagccgacttatttaccagagctaagctcgagtccgtcttggattggcat 487 ||||||||||| || ||| | || |||||||| || || ||| || |||||||||||||| Sbjct: 401 cactggtatcctgcagacctgttcaccagagccaaacttgaggccatcttggattggcat 460 Query: 488 cactctaatctgcgccgtggtgcagcatcctatgtactgcacaccgcgttgggtcctgct 547 || || ||| |||| |||||||||||| ||| ||||| |||||| ||||| |||| || Sbjct: 461 cattcaaatttgcgtcgtggtgcagcaaccttcatactgaacaccgtgttggctccttct 520 Query: 548 ct 549 || Sbjct: 521 ct 522 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||||||||| |||| |||| | ||||||||||||| ||||| | | Sbjct: 719 attcttggacctcatgagaaaatccgcagttgggttcagaatgtgaagaaagccacaagc 778 Query: 806 cctcatttcgatgaagtccatcagctcatcttcaa 840 |||||||| |||||||||||| ||||||| ||||| Sbjct: 779 cctcattttgatgaagtccatgagctcattttcaa 813 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 248 aaccggatcgatttcgaggaggtcaaagtggatctg 283 ||||||||||||||||||||||||| ||||||||| Sbjct: 221 aaccggatcgatttcgaggaggtcacggtggatctg 256
>gb|AF402793.1| Oryza sativa (japonica cultivar-group) clone RICS4992A putative glutathione S-transferase OsGSTT1 mRNA, complete cds Length = 1194 Score = 123 bits (62), Expect = 1e-24 Identities = 197/242 (81%) Strand = Plus / Plus Query: 308 gaattcaacaagatcaacccgatgggacaggtcccagcaatcatcgatggaagattcaaa 367 |||||||| ||||| ||||| ||||||||||| ||||||||| | ||||| |||||| | Sbjct: 291 gaattcaagaagataaacccaatgggacaggtgccagcaatcgttgatgggcgattcaga 350 Query: 368 ctattcgaaagccatgccatcctgaggtatctcgccaccgtcttccccggagtcccggac 427 | || || ||||||||||| ||||||||||| || || || ||||| ||||| | || Sbjct: 351 ttgtttgagagccatgccattctgaggtatcttgcaacggtgttccctggagttgcagat 410 Query: 428 cactggtatccagccgacttatttaccagagctaagctcgagtccgtcttggattggcat 487 ||||||||||| || ||| | || |||||||| || || ||| || |||||||||||||| Sbjct: 411 cactggtatcctgcagacctgttcaccagagccaaacttgaggccatcttggattggcat 470 Query: 488 cactctaatctgcgccgtggtgcagcatcctatgtactgcacaccgcgttgggtcctgct 547 || || ||| |||| |||||||||||| ||| ||||| |||||| ||||| |||| || Sbjct: 471 cattcaaatttgcgtcgtggtgcagcaaccttcatactgaacaccgtgttggctccttct 530 Query: 548 ct 549 || Sbjct: 531 ct 532 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||||||||| |||| |||| | ||||||||||||| ||||| | | Sbjct: 729 attcttggacctcatgagaaaatccgcagttgggttcagaatgtgaagaaagccacaagc 788 Query: 806 cctcatttcgatgaagtccatcagctcatcttcaa 840 |||||||| |||||||||||| ||||||| ||||| Sbjct: 789 cctcattttgatgaagtccatgagctcattttcaa 823 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 248 aaccggatcgatttcgaggaggtcaaagtggatctg 283 ||||||||||||||||||||||||| ||||||||| Sbjct: 231 aaccggatcgatttcgaggaggtcacggtggatctg 266
>dbj|AK104738.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D05, full insert sequence Length = 1074 Score = 123 bits (62), Expect = 1e-24 Identities = 197/242 (81%) Strand = Plus / Plus Query: 308 gaattcaacaagatcaacccgatgggacaggtcccagcaatcatcgatggaagattcaaa 367 |||||||| ||||| ||||| ||||||||||| ||||||||| | ||||| |||||| | Sbjct: 186 gaattcaagaagataaacccaatgggacaggtgccagcaatcgttgatgggcgattcaga 245 Query: 368 ctattcgaaagccatgccatcctgaggtatctcgccaccgtcttccccggagtcccggac 427 | || || ||||||||||| ||||||||||| || || || ||||| ||||| | || Sbjct: 246 ttgtttgagagccatgccattctgaggtatcttgcaacggtgttccctggagttgcagat 305 Query: 428 cactggtatccagccgacttatttaccagagctaagctcgagtccgtcttggattggcat 487 ||||||||||| || ||| | || |||||||| || || ||| || |||||||||||||| Sbjct: 306 cactggtatcctgcagacctgttcaccagagccaaacttgaggccatcttggattggcat 365 Query: 488 cactctaatctgcgccgtggtgcagcatcctatgtactgcacaccgcgttgggtcctgct 547 || || ||| |||| |||||||||||| ||| ||||| |||||| ||||| |||| || Sbjct: 366 cattcaaatttgcgtcgtggtgcagcaaccttcatactgaacaccgtgttggctccttct 425 Query: 548 ct 549 || Sbjct: 426 ct 427 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||||||||| |||| |||| | ||||||||||||| ||||| | | Sbjct: 624 attcttggacctcatgagaaaatccgcagttgggttcagaatgtgaagaaagccacaagc 683 Query: 806 cctcatttcgatgaagtccatcagctcatcttcaa 840 |||||||| |||||||||||| ||||||| ||||| Sbjct: 684 cctcattttgatgaagtccatgagctcattttcaa 718 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 248 aaccggatcgatttcgaggaggtcaaagtggatctg 283 ||||||||||||||||||||||||| ||||||||| Sbjct: 126 aaccggatcgatttcgaggaggtcacggtggatctg 161
>dbj|AK060166.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D09, full insert sequence Length = 1107 Score = 123 bits (62), Expect = 1e-24 Identities = 197/242 (81%) Strand = Plus / Plus Query: 308 gaattcaacaagatcaacccgatgggacaggtcccagcaatcatcgatggaagattcaaa 367 |||||||| ||||| ||||| ||||||||||| ||||||||| | ||||| |||||| | Sbjct: 219 gaattcaagaagataaacccaatgggacaggtgccagcaatcgttgatgggcgattcaga 278 Query: 368 ctattcgaaagccatgccatcctgaggtatctcgccaccgtcttccccggagtcccggac 427 | || || ||||||||||| ||||||||||| || || || ||||| ||||| | || Sbjct: 279 ttgtttgagagccatgccattctgaggtatcttgcaacggtgttccctggagttgcagat 338 Query: 428 cactggtatccagccgacttatttaccagagctaagctcgagtccgtcttggattggcat 487 ||||||||||| || ||| | || |||||||| || || ||| || |||||||||||||| Sbjct: 339 cactggtatcctgcagacctgttcaccagagccaaacttgaggccatcttggattggcat 398 Query: 488 cactctaatctgcgccgtggtgcagcatcctatgtactgcacaccgcgttgggtcctgct 547 || || ||| |||| |||||||||||| ||| ||||| |||||| ||||| |||| || Sbjct: 399 cattcaaatttgcgtcgtggtgcagcaaccttcatactgaacaccgtgttggctccttct 458 Query: 548 ct 549 || Sbjct: 459 ct 460 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||||||||| |||| |||| | ||||||||||||| ||||| | | Sbjct: 657 attcttggacctcatgagaaaatccgcagttgggttcagaatgtgaagaaagccacaagc 716 Query: 806 cctcatttcgatgaagtccatcagctcatcttcaa 840 |||||||| |||||||||||| ||||||| ||||| Sbjct: 717 cctcattttgatgaagtccatgagctcattttcaa 751 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 248 aaccggatcgatttcgaggaggtcaaagtggatctg 283 ||||||||||||||||||||||||| ||||||||| Sbjct: 159 aaccggatcgatttcgaggaggtcacggtggatctg 194
>gb|DQ245475.1| Zea mays clone 15891 mRNA sequence Length = 888 Score = 119 bits (60), Expect = 2e-23 Identities = 183/224 (81%) Strand = Plus / Plus Query: 308 gaattcaacaagatcaacccgatgggacaggtcccagcaatcatcgatggaagattcaaa 367 |||||||| || || ||||| ||||||||||| || ||||| | ||||||||||||||| Sbjct: 148 gaattcaaaaaaataaacccaatgggacaggtacctgcaattgttgatggaagattcaaa 207 Query: 368 ctattcgaaagccatgccatcctgaggtatctcgccaccgtcttccccggagtcccggac 427 ||||| ||||| ||||| || |||||||||| || | || ||||| ||||| | ||| Sbjct: 208 ctatttgaaagtcatgcgattttgaggtatcttgcatcggttttccctggagttgctgac 267 Query: 428 cactggtatccagccgacttatttaccagagctaagctcgagtccgtcttggattggcat 487 ||||||||||| | ||||| || |||||||| || | ||||| |||||||||||||| Sbjct: 268 cactggtatccttctgacttgttcaccagagccaaaattgagtcaatcttggattggcat 327 Query: 488 cactctaatctgcgccgtggtgcagcatcctatgtactgcacac 531 ||||| ||| |||| |||||||||||| || |||| ||||||| Sbjct: 328 cactcaaatttgcggcgtggtgcagcaacccttgtaatgcacac 371 Score = 75.8 bits (38), Expect = 3e-10 Identities = 158/198 (79%) Strand = Plus / Plus Query: 616 gatcgaaacggtgtggctcaaaggcgatgcaaaattcttgaatggcaacccccagccatc 675 ||||||| |||| ||||| ||||||||||| || |||||| || | |||||||||||| Sbjct: 456 gatcgaatcggtatggctgaaaggcgatgccaagttcttgctaggtagcccccagccatc 515 Query: 676 gatcgcagacctcagcctcgtgtgcgagataatgcagctggaggttgtcggtgatgagag 735 ||| ||||| || ||||| || || |||||||||||| ||||| | | || |||||| Sbjct: 516 gattgcagatctgagccttgtctgtgagataatgcagttggagatccttggcgatgaggt 575 Query: 736 acgtgacacaattctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaa 795 |||||| | | || ||| ||||||||||| ||| || |||||||| || |||||||| Sbjct: 576 ccgtgaccgattcctgggagctcatgagaagatccttgtctggatggacaaggtgaagaa 635 Query: 796 ggccaccaaccctcattt 813 ||||| | ||||||||| Sbjct: 636 agccacgagccctcattt 653 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 230 atcatcttgtgcaaggccaaccggatcgatttcgaggaggtcaaagtggatctg 283 |||||||| |||| || |||| |||||||||||||||||||| ||||||||| Sbjct: 70 atcatcttctgcagggtgaaccagatcgatttcgaggaggtcacggtggatctg 123
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||||||||| |||| |||| | ||||||||||||| ||||| | | Sbjct: 113346 attcttggacctcatgagaaaatccgcagttgggttcagaatgtgaagaaagccacaagc 113405 Query: 806 cctcatttcgatgaagtccatcagctcatcttcaa 840 |||||||| |||||||||||| ||||||| ||||| Sbjct: 113406 cctcattttgatgaagtccatgagctcattttcaa 113440 Score = 58.0 bits (29), Expect = 7e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||| ||||| |||| | |||| | ||||||||||||| ||||| | | Sbjct: 128537 attcttggacctcacgagaaaatccgcggttgggttcagaatgtgaagaaagccacaagc 128596 Query: 806 cctcatttcgatgaagtccatcagctcat 834 |||||||| ||||| |||||| ||||||| Sbjct: 128597 cctcattttgatgaggtccatgagctcat 128625 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 248 aaccggatcgatttcgaggaggtcaaagtggatctg 283 ||||||||||||||||||||||||| ||||||||| Sbjct: 109881 aaccggatcgatttcgaggaggtcacggtggatctg 109916 Score = 52.0 bits (26), Expect = 0.004 Identities = 77/94 (81%) Strand = Plus / Plus Query: 627 tgtggctcaaaggcgatgcaaaattcttgaatggcaacccccagccatcgatcgcagacc 686 |||||||||||||| | ||||| ||||| |||||||| |||| ||| || ||||| | Sbjct: 128179 tgtggctcaaaggcaacgcaaagttcttactgggcaaccctcagctatcaatggcagatc 128238 Query: 687 tcagcctcgtgtgcgagataatgcagctggaggt 720 | ||||| || ||||| ||||||||| ||||||| Sbjct: 128239 ttagccttgtttgcgaaataatgcagttggaggt 128272 Score = 50.1 bits (25), Expect = 0.016 Identities = 52/61 (85%) Strand = Plus / Plus Query: 452 accagagctaagctcgagtccgtcttggattggcatcactctaatctgcgccgtggtgca 511 |||||||| || || ||| || |||||||||||||||| || ||| |||| ||||||||| Sbjct: 112553 accagagccaaacttgaggccatcttggattggcatcattcaaatttgcgtcgtggtgca 112612 Query: 512 g 512 | Sbjct: 112613 g 112613
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 69.9 bits (35), Expect = 2e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||||||||| |||| |||| | ||||||||||||| ||||| | | Sbjct: 21455596 attcttggacctcatgagaaaatccgcagttgggttcagaatgtgaagaaagccacaagc 21455655 Query: 806 cctcatttcgatgaagtccatcagctcatcttcaa 840 |||||||| |||||||||||| ||||||| ||||| Sbjct: 21455656 cctcattttgatgaagtccatgagctcattttcaa 21455690 Score = 58.0 bits (29), Expect = 7e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||| ||||| |||| | |||| | ||||||||||||| ||||| | | Sbjct: 21470787 attcttggacctcacgagaaaatccgcggttgggttcagaatgtgaagaaagccacaagc 21470846 Query: 806 cctcatttcgatgaagtccatcagctcat 834 |||||||| ||||| |||||| ||||||| Sbjct: 21470847 cctcattttgatgaggtccatgagctcat 21470875 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 248 aaccggatcgatttcgaggaggtcaaagtggatctg 283 ||||||||||||||||||||||||| ||||||||| Sbjct: 21452131 aaccggatcgatttcgaggaggtcacggtggatctg 21452166 Score = 52.0 bits (26), Expect = 0.004 Identities = 77/94 (81%) Strand = Plus / Plus Query: 627 tgtggctcaaaggcgatgcaaaattcttgaatggcaacccccagccatcgatcgcagacc 686 |||||||||||||| | ||||| ||||| |||||||| |||| ||| || ||||| | Sbjct: 21470429 tgtggctcaaaggcaacgcaaagttcttactgggcaaccctcagctatcaatggcagatc 21470488 Query: 687 tcagcctcgtgtgcgagataatgcagctggaggt 720 | ||||| || ||||| ||||||||| ||||||| Sbjct: 21470489 ttagccttgtttgcgaaataatgcagttggaggt 21470522 Score = 50.1 bits (25), Expect = 0.016 Identities = 52/61 (85%) Strand = Plus / Plus Query: 452 accagagctaagctcgagtccgtcttggattggcatcactctaatctgcgccgtggtgca 511 |||||||| || || ||| || |||||||||||||||| || ||| |||| ||||||||| Sbjct: 21454803 accagagccaaacttgaggccatcttggattggcatcattcaaatttgcgtcgtggtgca 21454862 Query: 512 g 512 | Sbjct: 21454863 g 21454863
>ref|NM_001074709.1| Oryza sativa (japonica cultivar-group) Os11g0588500 (Os11g0588500) mRNA, complete cds Length = 1044 Score = 65.9 bits (33), Expect = 3e-07 Identities = 167/209 (79%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 627 tgtggctcaaaggcgatgcaaaattcttgaatggcaacccccagccatcgatcgcagacc 686 |||||||||||||| | ||||| ||||| |||||||| |||| ||| || ||||| | Sbjct: 758 tgtggctcaaaggcaacgcaaagttcttactgggcaaccctcagctatcaatggcagatc 817 Query: 687 tcagcctcgtgtgcgagataatgcagctggaggttgtcggtgatgagaga-cgtgacaca 745 | ||||| || ||||| ||||||||| ||||||| || ||||| || || || ||| Sbjct: 818 ttagccttgtttgcgaaataatgcagttggaggtcctcagtgat-agtgaacgcgaccgg 876 Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||| ||||| |||| | |||| | ||||||||||||| ||||| | | Sbjct: 877 attcttggacctcacgagaaaatccgcggttgggttcagaatgtgaagaaagccacaagc 936 Query: 806 cctcatttcgatgaagtccatcagctcat 834 |||||||| ||||| |||||| ||||||| Sbjct: 937 cctcattttgatgaggtccatgagctcat 965
>gb|AY541762.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (GSTT2) gene, complete cds Length = 3410 Score = 58.0 bits (29), Expect = 7e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 746 attctaggacctcatgagaaggtccgtgcttggatggagaatgtgaagaaggccaccaac 805 ||||| |||||||| ||||| |||| | |||| | ||||||||||||| ||||| | | Sbjct: 3243 attcttggacctcacgagaaaatccgcggttgggttcagaatgtgaagaaagccacaagc 3302 Query: 806 cctcatttcgatgaagtccatcagctcat 834 |||||||| ||||| |||||| ||||||| Sbjct: 3303 cctcattttgatgaggtccatgagctcat 3331 Score = 52.0 bits (26), Expect = 0.004 Identities = 77/94 (81%) Strand = Plus / Plus Query: 627 tgtggctcaaaggcgatgcaaaattcttgaatggcaacccccagccatcgatcgcagacc 686 |||||||||||||| | ||||| ||||| |||||||| |||| ||| || ||||| | Sbjct: 2885 tgtggctcaaaggcaacgcaaagttcttactgggcaaccctcagctatcaatggcagatc 2944 Query: 687 tcagcctcgtgtgcgagataatgcagctggaggt 720 | ||||| || ||||| ||||||||| ||||||| Sbjct: 2945 ttagccttgtttgcgaaataatgcagttggaggt 2978
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 136 gttgtggttgtggttgtaggtag 158 ||||||||||||||||||||||| Sbjct: 140251 gttgtggttgtggttgtaggtag 140273
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 ccgtcgcgcgcggtgatcatct 236 |||||||||||||||||||||| Sbjct: 4811225 ccgtcgcgcgcggtgatcatct 4811246
>gb|CP000416.1| Lactobacillus brevis ATCC 367, complete genome Length = 2291220 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Plus Query: 819 aagtccatcagctcatcttcaaattg 844 |||||||| ||||||||||||||||| Sbjct: 385175 aagtccataagctcatcttcaaattg 385200
>gb|AY439410.1| Armigeres subalbatus ASAP ID: 40901 glutathione S transferase mRNA sequence Length = 507 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Plus Query: 420 tcccggaccactggtatccagccgac 445 ||||||| |||||||||||||||||| Sbjct: 244 tcccggatcactggtatccagccgac 269
>gb|AC121285.7| Mus musculus chromosome 3, clone RP23-437I18, complete sequence Length = 190736 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 959 atcttctgtacaaaaaccaaac 980 |||||||||||||||||||||| Sbjct: 109170 atcttctgtacaaaaaccaaac 109191
>gb|AC102011.9| Mus musculus chromosome 5, clone RP24-536B19, complete sequence Length = 142377 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Minus Query: 947 tttgtgctgtaaatcttctgta 968 |||||||||||||||||||||| Sbjct: 5654 tttgtgctgtaaatcttctgta 5633
>gb|AY112312.1| Zea mays CL32957_1 mRNA sequence Length = 557 Score = 44.1 bits (22), Expect = 0.98 Identities = 43/50 (86%) Strand = Plus / Minus Query: 669 agccatcgatcgcagacctcagcctcgtgtgcgagataatgcagctggag 718 |||||||||| ||||| || ||||| || || |||||||||||| ||||| Sbjct: 364 agccatcgattgcagatctgagccttgtctgtgagataatgcagttggag 315
>gb|AC113288.7| Mus musculus chromosome 5, clone RP23-414I12, complete sequence Length = 185599 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Minus Query: 947 tttgtgctgtaaatcttctgta 968 |||||||||||||||||||||| Sbjct: 169544 tttgtgctgtaaatcttctgta 169523
>ref|NM_001006042.1| Danio rerio zgc:103421 (zgc:103421), mRNA gb|BC083370.1| Danio rerio zgc:103421, mRNA (cDNA clone MGC:103421 IMAGE:7233289), complete cds Length = 2102 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 gttgtggttgtggttgtaggt 156 ||||||||||||||||||||| Sbjct: 433 gttgtggttgtggttgtaggt 413
>ref|XM_655772.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3260.2), mRNA Length = 1665 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 gtcaaagtggatctggcaaag 289 ||||||||||||||||||||| Sbjct: 1447 gtcaaagtggatctggcaaag 1467
>gb|AF515526.1| Anopheles gambiae glutathione S-transferase (gstT1) mRNA, complete cds Length = 690 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 ccggaccactggtatccagccgact 446 ||||||||||||||||| ||||||| Sbjct: 247 ccggaccactggtatccggccgact 271
>gb|AC090731.5| Homo sapiens chromosome 8, clone RP1-92A23, complete sequence Length = 124630 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 797 gccaccaaccctcatttcgatgaag 821 |||||||||||||||||| |||||| Sbjct: 41490 gccaccaaccctcatttctatgaag 41514
>emb|CR391751.1| Gallus gallus finished cDNA, clone ChEST1034m11 Length = 884 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tgaagtgatgaagtgaaggaa 58 ||||||||||||||||||||| Sbjct: 3 tgaagtgatgaagtgaaggaa 23
>ref|XM_311299.2| Anopheles gambiae str. PEST ENSANGP00000017419 (ENSANGG00000014930), mRNA Length = 997 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 ccggaccactggtatccagccgact 446 ||||||||||||||||| ||||||| Sbjct: 312 ccggaccactggtatccggccgact 336 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 152,497,697 Number of extensions: 8105545 Number of successful extensions: 143336 Number of sequences better than 10.0: 25 Number of HSP's gapped: 143327 Number of HSP's successfully gapped: 47 Length of query: 1027 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1004 Effective length of database: 18,503,978,556 Effective search space: 18577994470224 Effective search space used: 18577994470224 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)