ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf28j16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120899:Os04g0660600 | 129 | 8e-31 | 2 | AK104932:Os01g0645200 | 27 | 5.5 | 3 | AK069337:Os01g0645200 | 27 | 5.5 | 4 | AK066980:Os02g0730800 | 27 | 5.5 | 5 | Os09g0426500:Os09g0426500 | 27 | 7.2 | 6 | AK107230:Os08g0560000 | 27 | 7.2 | 7 | AK107117:Os08g0560000 | 27 | 7.2 | 8 | AK099877:Os04g0502800 | 27 | 7.2 | 9 | AK071806:Os11g0427700 | 27 | 7.2 |
|---|
>AK120899:Os04g0660600 | Length = 69 Score = 129 bits (324), Expect = 8e-31 Identities = 59/69 (85%), Positives = 64/69 (92%) Frame = +1 Query: 79 MGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKP 258 MGF VT+ IF LAGF+A +FSLLCCNRG STN+FHLTLVITATVCCWMMWAIVYLAQ+KP Sbjct: 1 MGFWVTTLIFLLAGFVASLFSLLCCNRGPSTNLFHLTLVITATVCCWMMWAIVYLAQLKP 60 Query: 259 LINPILSGE 285 LINPILSGE Sbjct: 61 LINPILSGE 69
>AK104932:Os01g0645200 | Length = 419 Score = 26.9 bits (58), Expect = 5.5 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Frame = +1 Query: 73 PAMGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIF------HLTLVITATVCCWMMWAI 234 P +GF + + A + + CC G ++N+ ++ L + T C + AI Sbjct: 182 PMLGFAIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCS-TIGAI 240 Query: 235 VYLAQMKPLINPILSGE 285 V M PL+ +L+G+ Sbjct: 241 V----MTPLLTKLLAGQ 253
>AK069337:Os01g0645200 | Length = 419 Score = 26.9 bits (58), Expect = 5.5 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Frame = +1 Query: 73 PAMGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIF------HLTLVITATVCCWMMWAI 234 P +GF + + A + + CC G ++N+ ++ L + T C + AI Sbjct: 182 PMLGFAIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCS-TIGAI 240 Query: 235 VYLAQMKPLINPILSGE 285 V M PL+ +L+G+ Sbjct: 241 V----MTPLLTKLLAGQ 253
>AK066980:Os02g0730800 | Length = 399 Score = 26.9 bits (58), Expect = 5.5 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 318 LTMYHYSVENLYSFCCH 368 +++YH S E Y FCCH Sbjct: 229 VSIYHISWERDYGFCCH 245
>Os09g0426500:Os09g0426500 | Length = 539 Score = 26.6 bits (57), Expect = 7.2 Identities = 8/28 (28%), Positives = 16/28 (57%) Frame = +1 Query: 190 LVITATVCCWMMWAIVYLAQMKPLINPI 273 L + + CCW +W I+ + K ++P+ Sbjct: 187 LFLICSSCCWSLWLILQVPICKSYMDPL 214
>AK107230:Os08g0560000 | Length = 383 Score = 26.6 bits (57), Expect = 7.2 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +3 Query: 189 SGYYRYSLLLDDVGNRVPRADEA-FDQPHPERRVSPAPKII*D 314 +G YR L V +R R A F PER VSPAP++I D Sbjct: 306 NGRYRSVLHRVKVNSRRLRVSVASFHSVAPERVVSPAPELIDD 348
>AK107117:Os08g0560000 | Length = 383 Score = 26.6 bits (57), Expect = 7.2 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +3 Query: 189 SGYYRYSLLLDDVGNRVPRADEA-FDQPHPERRVSPAPKII*D 314 +G YR L V +R R A F PER VSPAP++I D Sbjct: 306 NGRYRSVLHRVKVNSRRLRVSVASFHSVAPERVVSPAPELIDD 348
>AK099877:Os04g0502800 | Length = 565 Score = 26.6 bits (57), Expect = 7.2 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = +1 Query: 178 FHLTLVITATVCCW-MMWAIVYLAQMKPL 261 F LT + A VCC + ++V++A++KP+ Sbjct: 518 FRLTFYVCAIVCCCGTLVSVVFIARIKPV 546
>AK071806:Os11g0427700 | Length = 546 Score = 26.6 bits (57), Expect = 7.2 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 52 ETDPATDPAMGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWM 222 ETDPAT +G + S F+L G + + + C R + + ++ TV W+ Sbjct: 236 ETDPATGACLGGSMRSPTFWL-GAVGFLITATCLARDVKGGMIY--GIVFVTVVSWI 289 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 7,812,489 Number of extensions: 152927 Number of successful extensions: 476 Number of sequences better than 10.0: 9 Number of HSP's gapped: 476 Number of HSP's successfully gapped: 9 Length of query: 146 Length of database: 15,399,855 Length adjustment: 91 Effective length of query: 55 Effective length of database: 11,756,124 Effective search space: 646586820 Effective search space used: 646586820 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
