>LOC_Os04g56540:12004.t05124:unspliced-genomic expressed protein|
Length = 3354
Score = 65.2 bits (136), Expect(4) = 4e-30
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 79 MGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHL 186
MGF VT+ IF LAGF+A +FSLLCCNRG STN++ L
Sbjct: 1 MGFWVTTLIFLLAGFVASLFSLLCCNRGPSTNLYAL 108
Score = 51.9 bits (107), Expect(4) = 4e-30
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1 / +1
Query: 226 WAIVYLAQMKPLINPILSGE*AL 294
WAIVYLAQ+KPLINPILSGE*A+
Sbjct: 2137 WAIVYLAQLKPLINPILSGE*AV 2205
Score = 48.3 bits (99), Expect(4) = 4e-30
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1 / +2
Query: 178 FHLTLVITATVCCWMMWAIVYL 243
FHLTLVITATVCCWMM +++L
Sbjct: 1457 FHLTLVITATVCCWMM*VLIHL 1522
Score = 27.6 bits (54), Expect(4) = 4e-30
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / +3
Query: 306 I*DPLTMYHYSVENLYSF 359
I* L +YHY VE+ YSF
Sbjct: 2211 I*SLLMLYHYLVEDFYSF 2264
Score = 46.0 bits (94), Expect(4) = 1e-15
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 290 AHSPLRMGLIKGFICARYTIAHI 222
AHSPLR+GLI GF CAR TIAH+
Sbjct: 2201 AHSPLRIGLISGFSCAR*TIAHL 2133
Score = 40.0 bits (81), Expect(4) = 1e-15
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = -1 / -1
Query: 227 HIIQQQTVAVITRVKWNM 174
+IIQQQTVAVIT+VKWN+
Sbjct: 1506 YIIQQQTVAVITKVKWNL 1453
Score = 29.7 bits (59), Expect(4) = 1e-15
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 360 KMNRGSQPNNDTL*ADLKL 304
KMNR Q N+DT *AD KL
Sbjct: 2265 KMNRNPQLNSDTA*ADFKL 2209
Score = 27.2 bits (53), Expect(4) = 1e-15
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1 / -2
Query: 173 LVEAPRLQQRSENXXXXXXXXXXXAEVTRNP 81
LV+ PRLQQ SE + VT+NP
Sbjct: 95 LVDGPRLQQSSEKREATKPARRKMSVVTQNP 3
Score = 36.3 bits (73), Expect(2) = 3e-05
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 225 VGNRVPRADEAFDQPHPERRVS 290
VGNR+ A EA DQP+P+RRVS
Sbjct: 2136 VGNRLSCAAEATDQPYPKRRVS 2201
Score = 33.6 bits (67), Expect(2) = 3e-05
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 177 IPFDSGYYRYSLLLDDVGN 233
IPFD GYY LLLDDV +
Sbjct: 1456 IPFDLGYYSNGLLLDDVSS 1512
Score = 32.9 bits (66), Expect(3) = 0.001
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -1
Query: 288 SLAAQDGVDQRLHLREVHDCP 226
SLAA D VDQ L LR++ DCP
Sbjct: 2199 SLAA*DRVDQWLQLRKIDDCP 2137
Score = 27.5 bits (54), Expect(3) = 0.001
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -3
Query: 225 HHPTTNCSGNNQSQM 181
HHPT N NNQ QM
Sbjct: 1504 HHPTANRCCNNQGQM 1460
Score = 22.1 bits (42), Expect(3) = 0.001
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1 / -2
Query: 389 SRFFIPVMATK*IEVLNRIMIHCERILN 306
S+ F + K*IE+LN I+I E+ N
Sbjct: 2294 SQQFFISVVPK*IEILN*IVIQHEQTSN 2211
Score = 30.9 bits (61), Expect(2) = 0.75
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 289 LTRRSGWG*SKASSARGTRLPT 224
LTRR G G*S AS+A+ RLPT
Sbjct: 2200 LTRRLG*G*SVASAAQDRRLPT 2135
Score = 23.5 bits (45), Expect(2) = 0.75
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 226 TSSNNKL*R**PESNGI 176
TSSN+K **P SNGI
Sbjct: 1505 TSSNSKPLL**PRSNGI 1455
>LOC_Os12g36580:12012.t03339:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed|
Length = 4080
Score = 28.6 bits (56), Expect(2) = 2.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 360 CCHDWNKEPA 389
CCH WN++PA
Sbjct: 3368 CCHGWNEDPA 3397
Score = 24.0 bits (46), Expect(2) = 2.9
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 88 LVTSAIFFLAGFIACMFSLLCCNRGAS 168
++ ++FFL+ + CMF+ G++
Sbjct: 3000 ILNPSLFFLSRYPRCMFNFFLMQNGST 3080
>LOC_Os01g09246:12001.t00803:unspliced-genomic expressed protein|
Length = 11453
Score = 25.4 bits (49), Expect(3) = 6.3
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 175 IFHLTLVITATVCCWMM 225
+FH ++ VCCW +
Sbjct: 5847 LFHHRMIFCLMVCCWQL 5897
Score = 23.5 bits (45), Expect(3) = 6.3
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 211 CCWMMWAIVYLAQMK 255
CC++MW ++L +M+
Sbjct: 7410 CCYLMWL*LFLWKMQ 7454
Score = 23.1 bits (44), Expect(3) = 6.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 88 LVTSAIFFLAGFIACMFSLL 147
++TSA F G + C+F +L
Sbjct: 4930 VITSAYFLCFGVLFCIFPVL 4989
>LOC_Os02g36280:12002.t03265:unspliced-genomic cytochrome P450 76C2, putative, expressed|
Length = 1995
Score = 28.4 bits (56), Expect(2) = 8.3
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = -3 / +1
Query: 366 GNKMNRGSQPNNDTL*ADLKLSSGQGSLAAQDGVDQRLHLREVHDCPHHPTT 211
G R QP T ++K SS G + D HL PHHP T
Sbjct: 91 GGPQARTRQPRTYTSQQEIK*SSTNGEAEERAMDDSGGHLHVALVVPHHPET 246
Score = 21.6 bits (41), Expect(2) = 8.3
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3 / +3
Query: 228 PHHPTTNCSGNNQS 187
PHH NC G S
Sbjct: 1446 PHHLRWNCEGKTTS 1487
>LOC_Os01g61640:12001.t05542:unspliced-genomic CTD small phosphatase-like protein, putative, expressed|
Length = 2820
Score = 30.2 bits (60), Expect = 8.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3 / -2
Query: 279 AQDGVDQRLHLREVHDCPHHPTTNC 205
AQDGV +R+ R P HPTT C
Sbjct: 350 AQDGVPRRIWSRTWRRNPIHPTTAC 276
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 109,184,767
Number of extensions: 1362553
Number of successful extensions: 8019
Number of sequences better than 10.0: 19
Length of query: 146
Length of database: 55,613,886
Length adjustment: 47
Effective length of query: 99
Effective length of database: 52,968,820
Effective search space: 5243913180
Effective search space used: 5243913180
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)