ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf28j16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os04g56540:12004.t05124:unspliced-genomic expressed protein 65 4e-30
2LOC_Os06g36480:12006.t03344:unspliced-genomic ANAC075, putat... 36 0.12
3LOC_Os09g16380:12009.t01425:unspliced-genomic ABC1 protein, ... 33 1.1
4LOC_Os07g19530:12007.t01807:unspliced-genomic peptidase fami... 33 1.5
5LOC_Os10g34380:12010.t02736:unspliced-genomic FF domain cont... 32 2.1
6LOC_Os02g54130:12002.t04992:unspliced-genomic dnaJ protein, ... 32 2.1
7LOC_Os02g05620:12002.t00460:unspliced-genomic protein bindin... 32 2.1
8LOC_Os05g07080:12005.t00597:unspliced-genomic S-domain recep... 32 2.9
9LOC_Os01g03170:12001.t00209:unspliced-genomic seven in absen... 32 2.9
10LOC_Os12g36580:12012.t03339:unspliced-genomic transposon pro... 29 2.9
11LOC_Os03g19427:12003.t01709:unspliced-genomic nicotianamine ... 31 3.9
12LOC_Os03g19420:12003.t01708:unspliced-genomic nicotianamine ... 31 3.9
13LOC_Os10g27340:12010.t02140:unspliced-genomic prolyl 4-hydro... 31 5.4
14LOC_Os08g06440:12008.t00534:unspliced-genomic SCAMP37, putat... 31 5.4
15LOC_Os01g09246:12001.t00803:unspliced-genomic expressed protein 25 6.3
16LOC_Os07g08970:12007.t00772:unspliced-genomic expressed protein 30 7.4
17LOC_Os01g05040:12001.t00391:unspliced-genomic hypothetical p... 30 7.4
18LOC_Os02g36280:12002.t03265:unspliced-genomic cytochrome P45... 28 8.3
19LOC_Os01g61640:12001.t05542:unspliced-genomic CTD small phos... 30 8.6

>LOC_Os04g56540:12004.t05124:unspliced-genomic expressed protein|
          Length = 3354
 Score = 65.2 bits (136), Expect(4) = 4e-30
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +1 / +1

                                               
Query: 79  MGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHL 186
           MGF VT+ IF LAGF+A +FSLLCCNRG STN++ L
Sbjct: 1   MGFWVTTLIFLLAGFVASLFSLLCCNRGPSTNLYAL 108



 Score = 51.9 bits (107), Expect(4) = 4e-30
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = +1 / +1

                                   
Query: 226  WAIVYLAQMKPLINPILSGE*AL 294
            WAIVYLAQ+KPLINPILSGE*A+
Sbjct: 2137 WAIVYLAQLKPLINPILSGE*AV 2205



 Score = 48.3 bits (99), Expect(4) = 4e-30
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1 / +2

                                  
Query: 178  FHLTLVITATVCCWMMWAIVYL 243
            FHLTLVITATVCCWMM  +++L
Sbjct: 1457 FHLTLVITATVCCWMM*VLIHL 1522



 Score = 27.6 bits (54), Expect(4) = 4e-30
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3 / +3

                              
Query: 306  I*DPLTMYHYSVENLYSF 359
            I*  L +YHY VE+ YSF
Sbjct: 2211 I*SLLMLYHYLVEDFYSF 2264



 Score = 46.0 bits (94), Expect(4) = 1e-15
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1 / -2

                                   
Query: 290  AHSPLRMGLIKGFICARYTIAHI 222
            AHSPLR+GLI GF CAR TIAH+
Sbjct: 2201 AHSPLRIGLISGFSCAR*TIAHL 2133



 Score = 40.0 bits (81), Expect(4) = 1e-15
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -1 / -1

                              
Query: 227  HIIQQQTVAVITRVKWNM 174
            +IIQQQTVAVIT+VKWN+
Sbjct: 1506 YIIQQQTVAVITKVKWNL 1453



 Score = 29.7 bits (59), Expect(4) = 1e-15
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -3 / -1

                               
Query: 360  KMNRGSQPNNDTL*ADLKL 304
            KMNR  Q N+DT *AD KL
Sbjct: 2265 KMNRNPQLNSDTA*ADFKL 2209



 Score = 27.2 bits (53), Expect(4) = 1e-15
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1 / -2

                                          
Query: 173 LVEAPRLQQRSENXXXXXXXXXXXAEVTRNP 81
           LV+ PRLQQ SE            + VT+NP
Sbjct: 95  LVDGPRLQQSSEKREATKPARRKMSVVTQNP 3



 Score = 36.3 bits (73), Expect(2) = 3e-05
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +3 / +3

                                  
Query: 225  VGNRVPRADEAFDQPHPERRVS 290
            VGNR+  A EA DQP+P+RRVS
Sbjct: 2136 VGNRLSCAAEATDQPYPKRRVS 2201



 Score = 33.6 bits (67), Expect(2) = 3e-05
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3 / +1

                               
Query: 177  IPFDSGYYRYSLLLDDVGN 233
            IPFD GYY   LLLDDV +
Sbjct: 1456 IPFDLGYYSNGLLLDDVSS 1512



 Score = 32.9 bits (66), Expect(3) = 0.001
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3 / -1

                                 
Query: 288  SLAAQDGVDQRLHLREVHDCP 226
            SLAA D VDQ L LR++ DCP
Sbjct: 2199 SLAA*DRVDQWLQLRKIDDCP 2137



 Score = 27.5 bits (54), Expect(3) = 0.001
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3 / -3

                           
Query: 225  HHPTTNCSGNNQSQM 181
            HHPT N   NNQ QM
Sbjct: 1504 HHPTANRCCNNQGQM 1460



 Score = 22.1 bits (42), Expect(3) = 0.001
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1 / -2

                                        
Query: 389  SRFFIPVMATK*IEVLNRIMIHCERILN 306
            S+ F   +  K*IE+LN I+I  E+  N
Sbjct: 2294 SQQFFISVVPK*IEILN*IVIQHEQTSN 2211



 Score = 30.9 bits (61), Expect(2) = 0.75
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = -2 / -3

                                  
Query: 289  LTRRSGWG*SKASSARGTRLPT 224
            LTRR G G*S AS+A+  RLPT
Sbjct: 2200 LTRRLG*G*SVASAAQDRRLPT 2135



 Score = 23.5 bits (45), Expect(2) = 0.75
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -2 / -2

                             
Query: 226  TSSNNKL*R**PESNGI 176
            TSSN+K   **P SNGI
Sbjct: 1505 TSSNSKPLL**PRSNGI 1455



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>LOC_Os06g36480:12006.t03344:unspliced-genomic ANAC075, putative, expressed|
          Length = 7733

 Score = 36.3 bits (73), Expect = 0.12
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +1 / -2

                                           
Query: 64   ATDPAMGFLVTSAIFFLAGFIACMFSLLCCN 156
            ATD  + FLV S +FFL+ F  C+  LLC N
Sbjct: 6901 ATDG*LTFLVMSPLFFLSFFFFCLSLLLCFN 6809



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>LOC_Os09g16380:12009.t01425:unspliced-genomic ABC1 protein, putative|
          Length = 12995

 Score = 33.1 bits (66), Expect = 1.1
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +1 / -2

                                  
Query: 307  FKIRSQCIIIRLRTSIHFVAMT 372
            F + S+CI++R++T I F+AMT
Sbjct: 7072 FSMESRCILVRIKTVIVFIAMT 7007



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>LOC_Os07g19530:12007.t01807:unspliced-genomic peptidase family M28 containing protein, expressed|
          Length = 19211

 Score = 32.7 bits (65), Expect = 1.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1 / +1

                                                 
Query: 166  STNIFHLTLVITATVCCWMMWAIVYLAQMKPLINPIL 276
            S  I H   +   ++C W  WA+VYL+ ++ L+N +L
Sbjct: 2320 SVGIPHHRYLGKPSLCGWSPWAMVYLSTLQTLLNFLL 2430



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>LOC_Os10g34380:12010.t02736:unspliced-genomic FF domain containing protein, expressed|
          Length = 10660

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1 / +3

                                              
Query: 97   SAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVI 198
            S    L G   C FS+L C+   S N+F+L L +
Sbjct: 8187 SGCMILPGCCPCQFSVLLCSNHDSRNVFNLLLCL 8288



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>LOC_Os02g54130:12002.t04992:unspliced-genomic dnaJ protein, putative, expressed|
          Length = 5770

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1 / -2

                                           
Query: 85   FLVTSAIFFLAGFIACMFSLLCCNRGASTNI 177
            FL+  A+F L  F AC+ SL CC +  +  I
Sbjct: 5205 FLLRLAVFPLRVFAACLASLFCCRKAPAKMI 5113



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>LOC_Os02g05620:12002.t00460:unspliced-genomic protein binding protein, putative, expressed|
          Length = 2472

 Score = 32.2 bits (64), Expect = 2.1
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2 / -2

                                 
Query: 295 AGLTRRSGWG*SKASSARGTRL 230
           AG T RS WG + ASSARG R+
Sbjct: 209 AGPTARSMWGPAAASSARGARI 144



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>LOC_Os05g07080:12005.t00597:unspliced-genomic S-domain receptor-like protein kinase, putative, expressed|
          Length = 2934

 Score = 31.8 bits (63), Expect = 2.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1 / -3

                                                      
Query: 130  CMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMK 255
            C    + C    S  + H+  +    + CW++WAI Y A+ K
Sbjct: 1219 CYHRNMQCKNNYSGKLVHIGQLS*QLL*CWLLWAIQYRARSK 1094



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>LOC_Os01g03170:12001.t00209:unspliced-genomic seven in absentia protein family protein, expressed|
          Length = 3729

 Score = 31.8 bits (63), Expect = 2.9
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3 / +3

                                         
Query: 213  LLDDVGNRVPRADEAFDQPHPERRVSPAP 299
            LL  V  R PRA    D+PHP R   P P
Sbjct: 948  LLRRVPGRTPRAQAPGDRPHPRRPHHPLP 1034



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>LOC_Os12g36580:12012.t03339:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed|
          Length = 4080

 Score = 28.6 bits (56), Expect(2) = 2.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3 / +2

                      
Query: 360  CCHDWNKEPA 389
            CCH WN++PA
Sbjct: 3368 CCHGWNEDPA 3397



 Score = 24.0 bits (46), Expect(2) = 2.9
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +1 / +3

                                       
Query: 88   LVTSAIFFLAGFIACMFSLLCCNRGAS 168
            ++  ++FFL+ +  CMF+      G++
Sbjct: 3000 ILNPSLFFLSRYPRCMFNFFLMQNGST 3080



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>LOC_Os03g19427:12003.t01709:unspliced-genomic nicotianamine synthase 1, putative, expressed|
          Length = 1413

 Score = 31.3 bits (62), Expect = 3.9
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -2 / -1

                                            
Query: 316 GS*IIFGAGLTRRSGWG*SKASSARGTRLPTSS 218
           GS*   G    RR GWG  +  S RG R P  S
Sbjct: 528 GS*TAAGPTRRRRRGWGQCRGRSGRGGRTPACS 430



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>LOC_Os03g19420:12003.t01708:unspliced-genomic nicotianamine synthase 2, putative, expressed|
          Length = 1476

 Score = 31.3 bits (62), Expect = 3.9
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -2 / -1

                                            
Query: 316 GS*IIFGAGLTRRSGWG*SKASSARGTRLPTSS 218
           GS*   G    RR GWG  +  S RG R P  S
Sbjct: 531 GS*TAAGPTRRRRRGWGQCRGRSGRGGRTPACS 433



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>LOC_Os10g27340:12010.t02140:unspliced-genomic prolyl 4-hydroxylase, putative, expressed|
          Length = 4154

 Score = 30.9 bits (61), Expect = 5.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1 / +2

                                              
Query: 136  FSLLCCNRGASTNIFHLTLVITATVCCWMMWAIV 237
            FS + C R  S N F  TLV+ A VC ++ +  +
Sbjct: 1412 FSFVVCER*NSINYFLFTLVLFAKVCYYLKFMYI 1513



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>LOC_Os08g06440:12008.t00534:unspliced-genomic SCAMP37, putative, expressed|
          Length = 2196

 Score = 30.9 bits (61), Expect = 5.4
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +1 / +2

                            
Query: 85  FLVTSAIFFLAGFIACM 135
           F++ +++FFLAG IAC+
Sbjct: 815 FIIATSVFFLAGLIACL 865



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>LOC_Os01g09246:12001.t00803:unspliced-genomic expressed protein|
          Length = 11453

 Score = 25.4 bits (49), Expect(3) = 6.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1 / +3

                             
Query: 175  IFHLTLVITATVCCWMM 225
            +FH  ++    VCCW +
Sbjct: 5847 LFHHRMIFCLMVCCWQL 5897



 Score = 23.5 bits (45), Expect(3) = 6.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1 / +3

                           
Query: 211  CCWMMWAIVYLAQMK 255
            CC++MW  ++L +M+
Sbjct: 7410 CCYLMWL*LFLWKMQ 7454



 Score = 23.1 bits (44), Expect(3) = 6.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1 / +1

                                
Query: 88   LVTSAIFFLAGFIACMFSLL 147
            ++TSA F   G + C+F +L
Sbjct: 4930 VITSAYFLCFGVLFCIFPVL 4989



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>LOC_Os07g08970:12007.t00772:unspliced-genomic expressed protein|
          Length = 3829

 Score = 30.4 bits (60), Expect = 7.4
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3 / -1

                               
Query: 240 PRADEAFDQPHPERRVSPAP 299
           PR   A   P P RRVSPAP
Sbjct: 265 PRTPPAHPSPPPRRRVSPAP 206



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>LOC_Os01g05040:12001.t00391:unspliced-genomic hypothetical protein|
          Length = 1788

 Score = 30.4 bits (60), Expect = 7.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3 / +3

                             
Query: 246 ADEAFDQPHPERRVSPAP 299
           ADE  D+P P RRV P P
Sbjct: 114 ADEVHDEPDPPRRVPPLP 167



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>LOC_Os02g36280:12002.t03265:unspliced-genomic cytochrome P450 76C2, putative, expressed|
          Length = 1995

 Score = 28.4 bits (56), Expect(2) = 8.3
 Identities = 17/52 (32%), Positives = 20/52 (38%)
 Frame = -3 / +1

                                                               
Query: 366 GNKMNRGSQPNNDTL*ADLKLSSGQGSLAAQDGVDQRLHLREVHDCPHHPTT 211
           G    R  QP   T   ++K SS  G    +   D   HL      PHHP T
Sbjct: 91  GGPQARTRQPRTYTSQQEIK*SSTNGEAEERAMDDSGGHLHVALVVPHHPET 246



 Score = 21.6 bits (41), Expect(2) = 8.3
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -3 / +3

                          
Query: 228  PHHPTTNCSGNNQS 187
            PHH   NC G   S
Sbjct: 1446 PHHLRWNCEGKTTS 1487



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>LOC_Os01g61640:12001.t05542:unspliced-genomic CTD small phosphatase-like protein, putative, expressed|
          Length = 2820

 Score = 30.2 bits (60), Expect = 8.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3 / -2

                                    
Query: 279 AQDGVDQRLHLREVHDCPHHPTTNC 205
           AQDGV +R+  R     P HPTT C
Sbjct: 350 AQDGVPRRIWSRTWRRNPIHPTTAC 276


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 109,184,767
Number of extensions: 1362553
Number of successful extensions: 8019
Number of sequences better than 10.0: 19
Length of query: 146
Length of database: 55,613,886
Length adjustment: 47
Effective length of query: 99
Effective length of database: 52,968,820
Effective search space: 5243913180
Effective search space used: 5243913180
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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