ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf28j16 |
|---|---|
| Clone Library Name | barley_pub |
>P81103:VA0E1_BOVIN Vacuolar ATP synthase subunit e 1 - Bos taurus (Bovine)| Length = 81 Score = 46.2 bits (108), Expect = 4e-05 Identities = 23/66 (34%), Positives = 35/66 (53%) Frame = +1 Query: 88 LVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLIN 267 +V S + + GF+ F NRG +T+++T +VCC++ W I LAQ+ PL Sbjct: 11 IVMSVFWGIVGFLVPWFIPKGPNRGVI-----ITMLVTCSVCCYLFWLIAILAQLNPLFG 65 Query: 268 PILSGE 285 P L E Sbjct: 66 PQLKNE 71
>Q5RAV0:VA0E1_PONPY Vacuolar ATP synthase subunit e 1 - Pongo pygmaeus (Orangutan)| Length = 81 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/66 (34%), Positives = 34/66 (51%) Frame = +1 Query: 88 LVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLIN 267 +V S + GF+ F NRG +T+++T +VCC++ W I LAQ+ PL Sbjct: 11 IVMSVFWGFVGFLVPWFIPKGPNRGVI-----ITMLVTCSVCCYLFWLIAILAQLNPLFG 65 Query: 268 PILSGE 285 P L E Sbjct: 66 PQLKNE 71
>O15342:VA0E1_HUMAN Vacuolar ATP synthase subunit e 1 - Homo sapiens (Human)| Length = 81 Score = 45.4 bits (106), Expect = 7e-05 Identities = 23/66 (34%), Positives = 34/66 (51%) Frame = +1 Query: 88 LVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLIN 267 +V S + GF+ F NRG +T+++T +VCC++ W I LAQ+ PL Sbjct: 11 IVMSVFWGFVGFLVPWFIPKGPNRGVI-----ITMLVTCSVCCYLFWLIAILAQLNPLFG 65 Query: 268 PILSGE 285 P L E Sbjct: 66 PQLKNE 71
>Q20591:VA0E_CAEEL Vacuolar ATP synthase subunit e - Caenorhabditis elegans| Length = 86 Score = 44.7 bits (104), Expect = 1e-04 Identities = 18/38 (47%), Positives = 26/38 (68%) Frame = +1 Query: 157 RGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLINP 270 +G + I L +++TA VCCWM W +V+L Q+ PLI P Sbjct: 27 KGPNRGIIQLMIIMTA-VCCWMFWIMVFLHQLNPLIGP 63
>Q9BDP4:VA0E1_CANFA Vacuolar ATP synthase subunit e 1 - Canis familiaris (Dog)| Length = 81 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/66 (34%), Positives = 33/66 (50%) Frame = +1 Query: 88 LVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLIN 267 +V S + GF F NRG +T+++T +VCC++ W I LAQ+ PL Sbjct: 11 IVMSVFWGFVGFCVPWFIPKGPNRGVI-----ITMLVTCSVCCYLFWLIAILAQLNPLFG 65 Query: 268 PILSGE 285 P L E Sbjct: 66 PQLKNE 71
>Q794C0:VA0E1_RAT Vacuolar ATP synthase subunit e 1 - Rattus norvegicus (Rat)| Length = 81 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/66 (33%), Positives = 33/66 (50%) Frame = +1 Query: 88 LVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLIN 267 +V S + G + F NRG +T+++T +VCC++ W I LAQ+ PL Sbjct: 11 IVMSVFWGFVGLLVPWFIPKGPNRGVI-----ITMLVTCSVCCYLFWLIAILAQLNPLFG 65 Query: 268 PILSGE 285 P L E Sbjct: 66 PQLKNE 71
>Q9CQD8:VA0E1_MOUSE Vacuolar ATP synthase subunit e 1 - Mus musculus (Mouse)| Length = 81 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/66 (33%), Positives = 33/66 (50%) Frame = +1 Query: 88 LVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLIN 267 +V S + G + F NRG +T+++T +VCC++ W I LAQ+ PL Sbjct: 11 IVMSVFWGFVGLLVPWFIPKGPNRGVI-----ITMLVTCSVCCYLFWLIAILAQLNPLFG 65 Query: 268 PILSGE 285 P L E Sbjct: 66 PQLKNE 71
>Q69Z14:VA0E_SCHPO Vacuolar ATP synthase subunit e - Schizosaccharomyces pombe| (Fission yeast) Length = 67 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/64 (34%), Positives = 39/64 (60%) Frame = +1 Query: 79 MGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKP 258 MG LV + L ++ + S +G +T+ + ++L++T + CC+++WAI YLAQ+ P Sbjct: 1 MGGLVVLLVGLLTALMSVV-SYYVSPKGNNTSTWQMSLILTFS-CCYLLWAITYLAQLHP 58 Query: 259 LINP 270 L P Sbjct: 59 LEAP 62
>Q5K8S8:VA0E_CRYNE Vacuolar ATP synthase subunit e - Cryptococcus neoformans| (Filobasidiella neoformans) Length = 71 Score = 42.4 bits (98), Expect = 6e-04 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = +1 Query: 157 RGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLINP 270 +G + + +L++T T CC++MWAI YL Q+ PLI P Sbjct: 26 KGKNQTLLRTSLLLTLT-CCYLMWAITYLCQLHPLITP 62
>Q8NHE4:VA0E2_HUMAN Vacuolar ATP synthase subunit e 2 - Homo sapiens (Human)| Length = 81 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +1 Query: 76 AMGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMK 255 A+ ++ + + L G F NRG +T+++ VCC++ W I LAQ+ Sbjct: 7 ALPVIIFTTFWGLVGIAGPWFVPKGPNRGVI-----ITMLVATAVCCYLFWLIAILAQLN 61 Query: 256 PLINPILSGE 285 PL P L E Sbjct: 62 PLFGPQLKNE 71
>Q5EB76:VA0E2_RAT Vacuolar ATP synthase subunit e 2 - Rattus norvegicus (Rat)| Length = 81 Score = 40.0 bits (92), Expect = 0.003 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +1 Query: 76 AMGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMK 255 A+ ++ + + L G F NRG +T+++ VCC++ W I LAQ+ Sbjct: 7 ALPVIIFTTFWGLIGIAGPWFVPKGPNRGVI-----ITMLVATAVCCYLFWLIAILAQLN 61 Query: 256 PLINPILSGE 285 PL P L E Sbjct: 62 PLFGPQLKNE 71
>Q91XE7:VA0E2_MOUSE Vacuolar ATP synthase subunit e 2 - Mus musculus (Mouse)| Length = 81 Score = 40.0 bits (92), Expect = 0.003 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +1 Query: 76 AMGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMK 255 A+ ++ + + L G F NRG +T+++ VCC++ W I LAQ+ Sbjct: 7 ALPVIIFTTFWGLIGIAGPWFVPKGPNRGVI-----ITMLVATAVCCYLFWLIAILAQLN 61 Query: 256 PLINPILSGE 285 PL P L E Sbjct: 62 PLFGPQLKNE 71
>Q2KIB5:VA0E2_BOVIN Vacuolar ATP synthase subunit e 2 - Bos taurus (Bovine)| Length = 81 Score = 39.7 bits (91), Expect = 0.004 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 Query: 184 LTLVITATVCCWMMWAIVYLAQMKPLINPILSGE 285 +T+++ VCC++ W I LAQ+ PL P L E Sbjct: 38 ITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNE 71
>Q75EU0:VA0E_ASHGO Vacuolar ATP synthase subunit e - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 72 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/64 (25%), Positives = 34/64 (53%) Frame = +1 Query: 79 MGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKP 258 M F A F + +F +L + ++ T++++ ++ ++MWA+ YL+Q+ P Sbjct: 1 MSFYTVVATFLSVVLASAVFWVLAPKENQT--VWRSTIILSMSMM-FLMWAVTYLSQLHP 57 Query: 259 LINP 270 L+ P Sbjct: 58 LVVP 61
>Q3E7B6:VA0E_YEAST Vacuolar ATP synthase subunit e - Saccharomyces cerevisiae (Baker's| yeast) Length = 73 Score = 31.2 bits (69), Expect = 1.5 Identities = 14/62 (22%), Positives = 33/62 (53%) Frame = +1 Query: 85 FLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQMKPLI 264 F +F + ++ +F ++ + ++ T+++T + ++MWAI +L Q+ PL+ Sbjct: 4 FYTVVGVFIVVSAMSVLFWIMAPKNNQA--VWRSTVILTLAMM-FLMWAITFLCQLHPLV 60 Query: 265 NP 270 P Sbjct: 61 AP 62
>Q8YB48:GLUP_BRUME Glucose/galactose transporter - Brucella melitensis| Length = 412 Score = 30.4 bits (67), Expect = 2.5 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 43 NPDETDPATDPAMGFLVTSA--IFFLAGFIACMFSLL 147 NP T+ ++ GF +TS +FF++GFI C+ +L Sbjct: 9 NPLHTETSSQKNYGFALTSLTLLFFMSGFITCLNDIL 45
>Q8NGF6:O10W1_HUMAN Olfactory receptor 10W1 - Homo sapiens (Human)| Length = 305 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 15/79 (18%) Frame = +1 Query: 85 FLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMW------------ 228 FL+T++ F+ + + S +R ST HLT+V+ CC M+ Sbjct: 203 FLITTSYTFIVAALLKIHSAAGRHRAFSTCSSHLTVVLLQYGCCAFMYLCPSSSYNPKQD 262 Query: 229 ---AIVYLAQMKPLINPIL 276 ++VY PL+NP++ Sbjct: 263 RFISLVYTLG-TPLLNPLI 280
>P0C105:GLUP_BRUAB Glucose/galactose transporter - Brucella abortus| Length = 412 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +1 Query: 43 NPDETDPATDPAMGFLVTSA--IFFLAGFIACMFSLL 147 NP T+ ++ GF +TS +FF+ GFI C+ +L Sbjct: 9 NPLHTETSSQKNYGFALTSLTLLFFMWGFITCLNDIL 45
>Q2YIJ8:GLUP_BRUA2 Glucose/galactose transporter - Brucella abortus (strain 2308)| Length = 412 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +1 Query: 43 NPDETDPATDPAMGFLVTSA--IFFLAGFIACMFSLL 147 NP T+ ++ GF +TS +FF+ GFI C+ +L Sbjct: 9 NPLHTETSSQKNYGFALTSLTLLFFMWGFITCLNDIL 45
>Q2TBK0:CF163_BOVIN Uncharacterized protein C6orf163 homolog - Bos taurus (Bovine)| Length = 329 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/46 (26%), Positives = 27/46 (58%) Frame = +3 Query: 159 RRLHQHIPFDSGYYRYSLLLDDVGNRVPRADEAFDQPHPERRVSPA 296 +R+H++ PF + +Y + +L D+G + +E F + + R++ A Sbjct: 30 KRIHEYKPFKTRFYTHKDIL-DIGKDILNKEEQFQEDALKERIAQA 74
>Q9QY33:TSN3_MOUSE Tetraspanin-3 - Mus musculus (Mouse)| Length = 253 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/61 (27%), Positives = 30/61 (49%) Frame = +1 Query: 73 PAMGFLVTSAIFFLAGFIACMFSLLCCNRGASTNIFHLTLVITATVCCWMMWAIVYLAQM 252 PA+ + A+ F+ G I C ++ G +T +F L LV V ++ VY A++ Sbjct: 53 PAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVFILLLVFVTEVVV-VVLGYVYRAKV 111 Query: 253 K 255 + Sbjct: 112 E 112
>P57310:MURC_BUCAI UDP-N-acetylmuramate--L-alanine ligase - Buchnera aphidicola subsp.| Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 484 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 7/48 (14%) Frame = -3 Query: 336 NNDTL*ADLKLSSGQ-------GSLAAQDGVDQRLHLREVHDCPHHPT 214 NND + A LK G G L+ G D+R + + D HHPT Sbjct: 309 NNDLMIASLKNFQGTCRRFEFLGFLSIDQGFDKRANCMLIDDYGHHPT 356 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 48,252,904 Number of extensions: 877393 Number of successful extensions: 2718 Number of sequences better than 10.0: 22 Number of HSP's gapped: 2717 Number of HSP's successfully gapped: 22 Length of query: 146 Length of database: 100,686,439 Length adjustment: 102 Effective length of query: 44 Effective length of database: 72,708,349 Effective search space: 3199167356 Effective search space used: 3199167356 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
