| Clone Name | FLbaf28j16 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830743.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z68, full insert sequence Length = 525 Score = 163 bits (82), Expect = 6e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 125 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 184 Query: 133 atgttctcgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctg 192 | |||||||| ||||||||||||||||| | || |||||| ||||||||||||| || Sbjct: 185 ctcttctcgctgctctgctgcaaccgcgggccgtcgaccaacctattccatttgaccttg 244 Query: 193 gttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatg 252 |||||||| || || ||||| ||||||||||||||||||||||| || || |||||| || Sbjct: 245 gttattacagcaacggtttgctgttggatgatgtgggcaatcgtctatcttgcgcagctg 304 Query: 253 aagcctttgatcaaccccatcctgagcggcgagtgagc 290 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 305 aagccactgatcaaccctatcctaagcggcgagtgagc 342
>emb|CT834066.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI021F12, full insert sequence Length = 565 Score = 163 bits (82), Expect = 6e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 127 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 186 Query: 133 atgttctcgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctg 192 | |||||||| ||||||||||||||||| | || |||||| ||||||||||||| || Sbjct: 187 ctcttctcgctgctctgctgcaaccgcgggccgtcgaccaacctattccatttgaccttg 246 Query: 193 gttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatg 252 |||||||| || || ||||| ||||||||||||||||||||||| || || |||||| || Sbjct: 247 gttattacagcaacggtttgctgttggatgatgtgggcaatcgtctatcttgcgcagctg 306 Query: 253 aagcctttgatcaaccccatcctgagcggcgagtgagc 290 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 307 aagccactgatcaaccctatcctaagcggcgagtgagc 344
>emb|CT834065.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI018M20, full insert sequence Length = 590 Score = 163 bits (82), Expect = 6e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 125 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 184 Query: 133 atgttctcgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctg 192 | |||||||| ||||||||||||||||| | || |||||| ||||||||||||| || Sbjct: 185 ctcttctcgctgctctgctgcaaccgcgggccgtcgaccaacctattccatttgaccttg 244 Query: 193 gttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatg 252 |||||||| || || ||||| ||||||||||||||||||||||| || || |||||| || Sbjct: 245 gttattacagcaacggtttgctgttggatgatgtgggcaatcgtctatcttgcgcagctg 304 Query: 253 aagcctttgatcaaccccatcctgagcggcgagtgagc 290 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 305 aagccactgatcaaccctatcctaagcggcgagtgagc 342
>emb|CT834064.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI013H23, full insert sequence Length = 589 Score = 163 bits (82), Expect = 6e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 126 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 185 Query: 133 atgttctcgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctg 192 | |||||||| ||||||||||||||||| | || |||||| ||||||||||||| || Sbjct: 186 ctcttctcgctgctctgctgcaaccgcgggccgtcgaccaacctattccatttgaccttg 245 Query: 193 gttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatg 252 |||||||| || || ||||| ||||||||||||||||||||||| || || |||||| || Sbjct: 246 gttattacagcaacggtttgctgttggatgatgtgggcaatcgtctatcttgcgcagctg 305 Query: 253 aagcctttgatcaaccccatcctgagcggcgagtgagc 290 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 306 aagccactgatcaaccctatcctaagcggcgagtgagc 343
>emb|CT834063.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI009I12, full insert sequence Length = 573 Score = 163 bits (82), Expect = 6e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 110 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 169 Query: 133 atgttctcgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctg 192 | |||||||| ||||||||||||||||| | || |||||| ||||||||||||| || Sbjct: 170 ctcttctcgctgctctgctgcaaccgcgggccgtcgaccaacctattccatttgaccttg 229 Query: 193 gttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatg 252 |||||||| || || ||||| ||||||||||||||||||||||| || || |||||| || Sbjct: 230 gttattacagcaacggtttgctgttggatgatgtgggcaatcgtctatcttgcgcagctg 289 Query: 253 aagcctttgatcaaccccatcctgagcggcgagtgagc 290 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 290 aagccactgatcaaccctatcctaagcggcgagtgagc 327
>ref|NM_001060680.1| Oryza sativa (japonica cultivar-group) Os04g0660600 (Os04g0660600) mRNA, complete cds Length = 573 Score = 163 bits (82), Expect = 6e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 118 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 177 Query: 133 atgttctcgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctg 192 | |||||||| ||||||||||||||||| | || |||||| ||||||||||||| || Sbjct: 178 ctcttctcgctgctctgctgcaaccgcgggccgtcgaccaacctattccatttgaccttg 237 Query: 193 gttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatg 252 |||||||| || || ||||| ||||||||||||||||||||||| || || |||||| || Sbjct: 238 gttattacagcaacggtttgctgttggatgatgtgggcaatcgtctatcttgcgcagctg 297 Query: 253 aagcctttgatcaaccccatcctgagcggcgagtgagc 290 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 298 aagccactgatcaaccctatcctaagcggcgagtgagc 335
>dbj|AK120899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J05, full insert sequence Length = 575 Score = 163 bits (82), Expect = 6e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 119 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 178 Query: 133 atgttctcgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctg 192 | |||||||| ||||||||||||||||| | || |||||| ||||||||||||| || Sbjct: 179 ctcttctcgctgctctgctgcaaccgcgggccgtcgaccaacctattccatttgaccttg 238 Query: 193 gttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatg 252 |||||||| || || ||||| ||||||||||||||||||||||| || || |||||| || Sbjct: 239 gttattacagcaacggtttgctgttggatgatgtgggcaatcgtctatcttgcgcagctg 298 Query: 253 aagcctttgatcaaccccatcctgagcggcgagtgagc 290 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 299 aagccactgatcaaccctatcctaagcggcgagtgagc 336
>gb|DQ245624.1| Zea mays clone 18473 mRNA sequence Length = 462 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Plus Query: 140 cgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctggttatta 199 |||||||||||||||||||||| ||||||| ||| ||||||||||||| |||| | || Sbjct: 178 cgctcctctgctgcaaccgcgggccctccacaaacctattccatttgaccttggtgacta 237 Query: 200 ccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatgaagcctt 259 | ||| | |||||||||||||||||| || ||||| ||||| || ||||||||||| | Sbjct: 238 cagctgtaatttgttgttggatgatgtatgctatcgtttaccttgctcagatgaagccat 297 Query: 260 tgatcaaccccatcctgagcggcgagtga 288 |||||||||||||||||||||| |||||| Sbjct: 298 tgatcaaccccatcctgagcggggagtga 326
>gb|AY103628.1| Zea mays PCO109231 mRNA sequence Length = 1907 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 140 cgctcctctgctgcaaccgcggcgcctccaccaacatattccatttgactctggttatta 199 |||||||||||||||||||||| ||||||| ||| | ||||||||||| |||| | || Sbjct: 1535 cgctcctctgctgcaaccgcgggccctccacaaacctgttccatttgaccttggtgacta 1594 Query: 200 ccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatgaagcctt 259 | ||| | ||||||| |||||||||| |||||||| ||||| || ||||||||||| | Sbjct: 1595 cagctgtaatttgttgctggatgatgtatgcaatcgtctaccttgctcagatgaagccat 1654 Query: 260 tgatcaaccccatcctgagcggcgagtgagccctgc 295 ||||||||||||| |||||||| |||||||| |||| Sbjct: 1655 tgatcaaccccattctgagcggagagtgagcgctgc 1690
>emb|CR855168.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0112G12, complete sequence Length = 103646 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 225 gtgggcaatcgtgtacctcgcgcagatgaagcctttgatcaaccccatcctgagcggcga 284 |||||||||||| || || |||||| ||||||| |||||||||| ||||| |||||||| Sbjct: 42606 gtgggcaatcgtctatcttgcgcagctgaagccactgatcaaccctatcctaagcggcga 42547 Query: 285 gtgagc 290 |||||| Sbjct: 42546 gtgagc 42541 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 44827 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 44768 Query: 133 atgttctcgctcctctgctgcaaccgcgg 161 | |||||||| ||||||||||||||||| Sbjct: 44767 ctcttctcgctgctctgctgcaaccgcgg 44739 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 177 attccatttgactctggttattaccgctacagtttgttgttggatgatgt 226 |||||||||||| |||||||||| || || ||||| ||||||||||||| Sbjct: 43286 attccatttgaccttggttattacagcaacggtttgctgttggatgatgt 43237
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 225 gtgggcaatcgtgtacctcgcgcagatgaagcctttgatcaaccccatcctgagcggcga 284 |||||||||||| || || |||||| ||||||| |||||||||| ||||| |||||||| Sbjct: 33754921 gtgggcaatcgtctatcttgcgcagctgaagccactgatcaaccctatcctaagcggcga 33754862 Query: 285 gtgagc 290 |||||| Sbjct: 33754861 gtgagc 33754856 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 33757062 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 33757003 Query: 133 atgttctcgctcctctgctgcaaccgcgg 161 | |||||||| ||||||||||||||||| Sbjct: 33757002 ctcttctcgctgctctgctgcaaccgcgg 33756974 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 177 attccatttgactctggttattaccgctacagtttgttgttggatgatgt 226 |||||||||||| |||||||||| || || ||||| ||||||||||||| Sbjct: 33755601 attccatttgaccttggttattacagcaacggtttgctgttggatgatgt 33755552
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 225 gtgggcaatcgtgtacctcgcgcagatgaagcctttgatcaaccccatcctgagcggcga 284 |||||||||||| || || |||||| ||||||| |||||||||| ||||| |||||||| Sbjct: 105364 gtgggcaatcgtctatcttgcgcagctgaagccactgatcaaccctatcctaagcggcga 105305 Query: 285 gtgagc 290 |||||| Sbjct: 105304 gtgagc 105299 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 73 ccggcgatggggttcctggtgacctccgccatcttcttcttggccggcttcatcgcctgc 132 ||||| ||||||||| ||||||| | ||||||| || | ||||||||| |||||| | Sbjct: 107505 ccggccatggggttctgggtgaccacgctcatcttcctcctcgccggcttcgtcgcctcc 107446 Query: 133 atgttctcgctcctctgctgcaaccgcgg 161 | |||||||| ||||||||||||||||| Sbjct: 107445 ctcttctcgctgctctgctgcaaccgcgg 107417 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 177 attccatttgactctggttattaccgctacagtttgttgttggatgatgt 226 |||||||||||| |||||||||| || || ||||| ||||||||||||| Sbjct: 106044 attccatttgaccttggttattacagcaacggtttgctgttggatgatgt 105995
>emb|CT984762.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 558 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 194 ttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatga 253 ||||||| || ||||| ||||||||||||||||||||||| || || ||||| || |||| Sbjct: 276 ttattacagcaacagtatgttgttggatgatgtgggcaattgtatatctcgctcaaatga 335 Query: 254 a 254 | Sbjct: 336 a 336
>emb|CT984611.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 553 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 194 ttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatga 253 ||||||| || ||||| ||||||||||||||||||||||| || || ||||| || |||| Sbjct: 266 ttattacagcaacagtatgttgttggatgatgtgggcaattgtatatctcgctcaaatga 325 Query: 254 a 254 | Sbjct: 326 a 326
>emb|CT980849.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 560 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 194 ttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatga 253 ||||||| || ||||| ||||||||||||||||||||||| || || ||||| || |||| Sbjct: 276 ttattacagcaacagtatgttgttggatgatgtgggcaattgtatatctcgctcaaatga 335 Query: 254 a 254 | Sbjct: 336 a 336
>emb|CT980135.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 558 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 194 ttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcagatga 253 ||||||| || ||||| ||||||||||||||||||||||| || || ||||| || |||| Sbjct: 276 ttattacagcaacagtatgttgttggatgatgtgggcaattgtatatctcgctcaaatga 335 Query: 254 a 254 | Sbjct: 336 a 336
>ref|NM_202894.1| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism (AT4G26710) mRNA, complete cds Length = 588 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaatcgtgtacctcgcgcagatgaa 254 |||||||||||||||||||| || ||| | ||||||||||| Sbjct: 244 tgttggatgatgtgggcaattgtatacattgcgcagatgaa 284
>ref|NM_118805.2| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism (AT4G26710) mRNA, complete cds Length = 553 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaatcgtgtacctcgcgcagatgaa 254 |||||||||||||||||||| || ||| | ||||||||||| Sbjct: 209 tgttggatgatgtgggcaattgtatacattgcgcagatgaa 249
>gb|BT000074.1| Arabidopsis thaliana putative protein (At4g26710) mRNA, complete cds Length = 336 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaatcgtgtacctcgcgcagatgaa 254 |||||||||||||||||||| || ||| | ||||||||||| Sbjct: 136 tgttggatgatgtgggcaattgtatacattgcgcagatgaa 176
>gb|AY093013.1| Arabidopsis thaliana putative protein (At4g26710) mRNA, complete cds Length = 565 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaatcgtgtacctcgcgcagatgaa 254 |||||||||||||||||||| || ||| | ||||||||||| Sbjct: 224 tgttggatgatgtgggcaattgtatacattgcgcagatgaa 264
>gb|AY084532.1| Arabidopsis thaliana clone 111016 mRNA, complete sequence Length = 568 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaatcgtgtacctcgcgcagatgaa 254 |||||||||||||||||||| || ||| | ||||||||||| Sbjct: 244 tgttggatgatgtgggcaattgtatacattgcgcagatgaa 284
>emb|AJ438879.1|MCR438879 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit e-like protein (vha-e gene) Length = 545 Score = 46.1 bits (23), Expect = 0.10 Identities = 56/67 (83%) Strand = Plus / Plus Query: 191 tggttattaccgctacagtttgttgttggatgatgtgggcaatcgtgtacctcgcgcaga 250 ||||| |||| || || ||||| ||||||||||||||||| || || || || || |||| Sbjct: 114 tggttcttacagcaacggtttgctgttggatgatgtgggctattgtatatcttgcacaga 173 Query: 251 tgaagcc 257 ||||||| Sbjct: 174 tgaagcc 180
>gb|AC189587.1| Brassica rapa subsp. pekinensis clone KBrH012K23, complete sequence Length = 128564 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 225 gtgggcaatcgtgtacctcgcgcagatgaagcct 258 |||||||||||| ||| | ||||||||||||||| Sbjct: 41442 gtgggcaatcgtttacattgcgcagatgaagcct 41409
>emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chromosome 13 Contains the 3' end of the KIAA0979 gene and part of a novel gene, complete sequence Length = 168487 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 cattttgttgccatgactggaa 376 |||||||||||||||||||||| Sbjct: 143674 cattttgttgccatgactggaa 143695
>emb|Z92540.1|HS179I15A Human DNA sequence from clone RP1-179I15 on chromosome 13. Contains a novel gene, a mitochondrial import receptor TOM22 pseudogene, the 5' end of the KL gene for klotho, ESTs, STSs and a CpG island, complete sequence Length = 146810 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 cattttgttgccatgactggaa 376 |||||||||||||||||||||| Sbjct: 7041 cattttgttgccatgactggaa 7062
>gb|AC158351.4| Mus musculus chromosome 8, clone RP24-274N3, complete sequence Length = 167820 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 ctgcatgttctcgctcctctgctgc 153 |||||||||||||||||| |||||| Sbjct: 10054 ctgcatgttctcgctcctatgctgc 10030
>gb|AC116861.27| Mus musculus chromosome 8, clone RP24-407N9, complete sequence Length = 173343 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 ctgcatgttctcgctcctctgctgc 153 |||||||||||||||||| |||||| Sbjct: 41692 ctgcatgttctcgctcctatgctgc 41716
>gb|AC104740.2| Homo sapiens chromosome 3 clone RP11-46D21, complete sequence Length = 156801 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 aacctctattcattttgttgc 365 ||||||||||||||||||||| Sbjct: 20146 aacctctattcattttgttgc 20126
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ccgccatcttcttcttggccg 118 ||||||||||||||||||||| Sbjct: 122348 ccgccatcttcttcttggccg 122328
>gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, complete sequence Length = 142193 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 aacctctattcattttgttgc 365 ||||||||||||||||||||| Sbjct: 133926 aacctctattcattttgttgc 133906
>gb|AC154557.2| Mus musculus BAC clone RP23-425M9 from 17, complete sequence Length = 186378 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 tgactggaataaagaacctgctgtg 392 ||||||||||||||| ||||||||| Sbjct: 139699 tgactggaataaagaccctgctgtg 139723
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 ctccgccatcttcttcttggccggc 120 |||||||||||| |||||||||||| Sbjct: 2090925 ctccgccatcttgttcttggccggc 2090949
>emb|CT030155.10| Mouse DNA sequence from clone RP23-425N11 on chromosome 17, complete sequence Length = 189713 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 tgactggaataaagaacctgctgtg 392 ||||||||||||||| ||||||||| Sbjct: 173586 tgactggaataaagaccctgctgtg 173610
>ref|XM_417421.2| PREDICTED: Gallus gallus hypothetical LOC419247 (LOC419247), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ctttgatcaaccccatcctg 276 |||||||||||||||||||| Sbjct: 3188 ctttgatcaaccccatcctg 3207
>ref|XM_366303.1| Magnaporthe grisea 70-15 hypothetical protein (MG10522.4) partial mRNA Length = 1203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tcttcttcttggccggcttc 123 |||||||||||||||||||| Sbjct: 1084 tcttcttcttggccggcttc 1065
>ref|NM_124911.1| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism (AT5G55290) mRNA, complete cds Length = 213 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaat 233 |||||||||||||||||||| Sbjct: 136 tgttggatgatgtgggcaat 155
>gb|AE012530.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 438 of 460 of the complete genome Length = 9597 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gcgatggggttcctggtgac 95 |||||||||||||||||||| Sbjct: 4586 gcgatggggttcctggtgac 4567
>gb|AY057717.1| Arabidopsis thaliana AT5g55290/MCO15_24 mRNA, complete cds Length = 213 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaat 233 |||||||||||||||||||| Sbjct: 136 tgttggatgatgtgggcaat 155
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gcgatggggttcctggtgac 95 |||||||||||||||||||| Sbjct: 4916298 gcgatggggttcctggtgac 4916279
>gb|AF372884.1|AF372884 Arabidopsis thaliana AT5g55290/MCO15_24 mRNA, complete cds Length = 559 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaat 233 |||||||||||||||||||| Sbjct: 317 tgttggatgatgtgggcaat 336
>gb|AC110078.2| Homo sapiens BAC clone RP11-358N5 from 2, complete sequence Length = 196117 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ctttgatcaaccccatcctg 276 |||||||||||||||||||| Sbjct: 33043 ctttgatcaaccccatcctg 33024
>gb|AC010740.7| Homo sapiens BAC clone RP11-493I5 from 2, complete sequence Length = 184455 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gaacctctattcattttgtt 363 |||||||||||||||||||| Sbjct: 90316 gaacctctattcattttgtt 90335
>emb|BX833920.1|CNS0A20W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 587 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaat 233 |||||||||||||||||||| Sbjct: 214 tgttggatgatgtgggcaat 233
>emb|BX832924.1|CNS0A216 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL22ZG01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tgttggatgatgtgggcaat 233 |||||||||||||||||||| Sbjct: 217 tgttggatgatgtgggcaat 236 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 61,667,807 Number of extensions: 3204063 Number of successful extensions: 218637 Number of sequences better than 10.0: 44 Number of HSP's gapped: 218635 Number of HSP's successfully gapped: 50 Length of query: 440 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 418 Effective length of database: 18,508,616,841 Effective search space: 7736601839538 Effective search space used: 7736601839538 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)