| Clone Name | FLbaf28j12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os02g0589700:Os02g0589700 | 28 | 1.8 | 2 | AY224502:Os06g0252300 | 27 | 4.0 | 3 | AK111228: | 27 | 4.0 | 4 | AK066448:Os06g0252300 | 27 | 4.0 | 5 | Os08g0153600:Os08g0153600 | 26 | 6.7 | 6 | AK106742:Os10g0327300 | 26 | 8.8 |
|---|
>Os02g0589700:Os02g0589700 | Length = 489 Score = 28.1 bits (61), Expect = 1.8 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%) Frame = +2 Query: 143 LVLTERRNVSC-----VFQSCNFGSGDSDFKRRVLMRV 241 +V+TERRN S + + FG G F+RR+++R+ Sbjct: 295 IVVTERRNYSAYDMEDLLAAVGFGDGIEPFRRRMVVRM 332
>AY224502:Os06g0252300 | Length = 1016 Score = 26.9 bits (58), Expect = 4.0 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Frame = +3 Query: 294 CKI-CTELSCKMCVYRQNQRCR 356 CK+ C E C CV R QRCR Sbjct: 365 CKVTCHEGDCPPCVVRVEQRCR 386
>AK111228: | Length = 764 Score = 26.9 bits (58), Expect = 4.0 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +2 Query: 38 TSCGSGSNGVLETQTRYHCLR 100 T C N + T TRYHCL+ Sbjct: 566 TLCNDCRNSIPPTNTRYHCLK 586
>AK066448:Os06g0252300 | Length = 847 Score = 26.9 bits (58), Expect = 4.0 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Frame = +3 Query: 294 CKI-CTELSCKMCVYRQNQRCR 356 CK+ C E C CV R QRCR Sbjct: 180 CKVTCHEGDCPPCVVRVEQRCR 201
>Os08g0153600:Os08g0153600 | Length = 613 Score = 26.2 bits (56), Expect = 6.7 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 Query: 185 SCNFGSGDSDFKRRVLMRVP 244 SC+F SGD+D RR+ +P Sbjct: 88 SCHFASGDADGARRLFASMP 107
>AK106742:Os10g0327300 | Length = 430 Score = 25.8 bits (55), Expect = 8.8 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = -2 Query: 386 YFFFFFLGKNTASLILPVDT---HLTGKFSTDFTVYMLSRFTSSIQPLT 249 YFF FF GK + P T L +T + ++L+ F Q LT Sbjct: 238 YFFGFFFGKTPLIKLSPKKTWEGFLGASVTTMLSAFVLANFMGHFQWLT 286 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,307,023 Number of extensions: 254106 Number of successful extensions: 518 Number of sequences better than 10.0: 6 Number of HSP's gapped: 518 Number of HSP's successfully gapped: 6 Length of query: 129 Length of database: 15,399,855 Length adjustment: 89 Effective length of query: 40 Effective length of database: 11,836,206 Effective search space: 473448240 Effective search space used: 473448240 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)