ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf25k08 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g42470:12001.t03764:unspliced-genomic pre-mRNA-splicing factor cwc24, putative, expressed| Length = 3160 Score = 126 bits (270), Expect(5) = 2e-73 Identities = 52/60 (86%), Positives = 54/60 (90%) Frame = +1 / +3 Query: 463 RNISEIYLHVQTNNDDAIAFYKKFGFEITETIHNYYTNITPPDCYVLTKFIVQAATNK*A 642 +NI EIYLHVQTNNDDAIAFYKKFGFEIT+TI YY NITPPDCYVLTKFI QAAT K*A Sbjct: 2610 QNIPEIYLHVQTNNDDAIAFYKKFGFEITKTIEKYYKNITPPDCYVLTKFIGQAATKK*A 2789 Score = 94.5 bits (200), Expect(5) = 2e-73 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = +3 / +3 Query: 201 VARTSLDGLRDKNVMQLKKLNMALFPVRYNDKYYQDAIASKDFSKL 338 V RTSLDG+RDKNVMQLKKLN ALFPVRYN+KYY D IASK+FSKL Sbjct: 228 VDRTSLDGVRDKNVMQLKKLNTALFPVRYNEKYYHDTIASKEFSKL 365 Score = 94.1 bits (199), Expect(5) = 2e-73 Identities = 38/45 (84%), Positives = 41/45 (91%) Frame = +3 / +2 Query: 336 LAYYSDICVGAIACRLEKKEGGVVRVYIMTLGVLAPYRGLGLAEH 470 +AYYSDICVGAIACRLEKKEGG V VYIMTLGVLAPYR LG+ E+ Sbjct: 785 VAYYSDICVGAIACRLEKKEGGAVCVYIMTLGVLAPYRSLGIGEN 919 Score = 26.7 bits (52), Expect(5) = 2e-73 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 / +1 Query: 145 GRWALGKERQLGATRRAAAS 204 GRWA GK ATRR AA+ Sbjct: 163 GRWAPGKGMPPRATRRRAAA 222 Score = 22.6 bits (43), Expect(5) = 2e-73 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +2 / +1 Query: 668 SCDLVTVCSSFSL 706 SCDLV V + FSL Sbjct: 2848 SCDLVAVSAVFSL 2886 Score = 100 bits (214), Expect(4) = 7e-49 Identities = 46/68 (67%), Positives = 51/68 (75%) Frame = -1 / -3 Query: 669 LCHKSRDGVCSFVCSSLDDKFGKNIAIWWSDVRIVIMYRLCYFETKLLVESNGIVVVCLN 490 L K G CSF+CSSL +KFGKNIAIW DV IV YRL F+ KLLVESNGI+VV LN Sbjct: 2816 LSQKESVGGCSFLCSSLTNKFGKNIAIWRRDVFIVFFYRLRNFKPKLLVESNGIIVVRLN 2637 Query: 489 V*VYLRDV 466 + VYLRDV Sbjct: 2636 MQVYLRDV 2613 Score = 74.4 bits (156), Expect(4) = 7e-49 Identities = 32/38 (84%), Positives = 34/38 (89%) Frame = -3 / -1 Query: 313 MASW*YLSL*RTGKSAMLSFLSCITFLSRRPSRDVRAT 200 M SW*Y SL*RTGKSA+LSFLSCITFLSR PS DVR+T Sbjct: 340 MVSW*YFSL*RTGKSAVLSFLSCITFLSRTPSSDVRST 227 Score = 61.1 bits (127), Expect(4) = 7e-49 Identities = 25/30 (83%), Positives = 27/30 (90%) Frame = -3 / -2 Query: 442 GANTPRVMI*TRTTPPSFFSRRQAIAPTHI 353 GA+TP VMI*T+T PPSFFSRR AIAPTHI Sbjct: 891 GASTPSVMI*TQTAPPSFFSRRHAIAPTHI 802 Score = 25.4 bits (49), Expect(4) = 7e-49 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -2 / -3 Query: 200 AAALLVAPSCLSFPSAHRP 144 AA LLVA + FP AH P Sbjct: 218 AALLLVARGGIPFPGAHLP 162 Score = 98.7 bits (209), Expect(3) = 2e-45 Identities = 40/63 (63%), Positives = 46/63 (73%) Frame = +3 / +2 Query: 462 AEHLGDILTRSDKQRRCHCFLQEVWFRNNRDDT*LLYEHHSTRLLCSYQIYRPGCYKQMS 641 AEH DIL SD+QR CHCFLQEVW N DD +L +HH+ RLLCSYQIY GCYK+MS Sbjct: 2609 AEHP*DILACSDEQR*CHCFLQEVWV*NYEDDRKIL*KHHAARLLCSYQIYWSGCYKEMS 2788 Query: 642 RHR 650 + Sbjct: 2789 NRQ 2797 Score = 80.3 bits (169), Expect(3) = 2e-45 Identities = 32/40 (80%), Positives = 35/40 (87%) Frame = +2 / +2 Query: 194 QRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILPGRH 313 +RR PDV GR AGQERDAAQEAQHGALPRPLQR++LP H Sbjct: 221 RRRGPDVAGRRAGQERDAAQEAQHGALPRPLQREVLPRHH 340 Score = 51.0 bits (105), Expect(3) = 2e-45 Identities = 25/45 (55%), Positives = 26/45 (57%) Frame = +1 / +3 Query: 340 LTIVIYVLEQSLVAWRRRKEGWSVFIS*LWVYWRPTVVLALRNIS 474 L IY + VAWRRRKE SVFIS* W YW VVL IS Sbjct: 789 LITAIYASGRLRVAWRRRKEEQSVFIS*RWGYWHRIVVLGSVRIS 923 Score = 100 bits (213), Expect(2) = 4e-29 Identities = 49/59 (83%), Positives = 50/59 (84%) Frame = -2 / -1 Query: 641 AHLFVAAWTINLVRT*QSGGVMFV**LCIVSVISKPNFL*KAMASSLFV*TCKYISEMF 465 AH FVAA INLVRT*QSGGVMF+* IV VIS PNFL*KAMASSLFV*TCKYIS MF Sbjct: 2788 AHFFVAA*PINLVRT*QSGGVMFL*YFSIVFVISNPNFL*KAMASSLFV*TCKYISGMF 2612 Score = 52.8 bits (109), Expect(2) = 4e-29 Identities = 23/43 (53%), Positives = 28/43 (65%) Frame = -2 / -1 Query: 473 EMFRKAKTTVGRQYTQSHDINTDHPSFLLLQATSDCSNTYITI 345 E+ KTT+ QY Q HDINTD SFLLLQAT + + YI + Sbjct: 922 EILTDPKTTIRCQYPQRHDINTDCSSFLLLQATRNRPDAYIAV 794 Score = 84.5 bits (178), Expect(2) = 1e-22 Identities = 36/51 (70%), Positives = 40/51 (78%) Frame = -3 / -2 Query: 643 LLICL*QPGR*IW*EHSNLVE*CSYSNYVSSLLFRNQTSCRKQWHRRCLSE 491 LLI L*QP +*IW*EHSNL *C YS ++SS F+ QTSCRKQWH RC SE Sbjct: 2790 LLISL*QPDQ*IW*EHSNLAA*CFYSIFLSSS*FQTQTSCRKQWHHRCSSE 2638 Score = 46.9 bits (96), Expect(2) = 1e-22 Identities = 20/41 (48%), Positives = 26/41 (63%) Frame = -1 / -3 Query: 462 QGQDHGRAPIHPES*YKHGPPLLPSSPGDKRLLQHIYHYSK 340 + QD+ P+ P S*YKH LLPSSPGD + + IY +K Sbjct: 911 RSQDYDTVPVPPAS*YKHRLLLLPSSPGDTQSPRRIYRCNK 789 Score = 68.0 bits (142), Expect(2) = 4e-18 Identities = 34/49 (69%), Positives = 37/49 (75%) Frame = +2 / +1 Query: 509 MPLLSTRSLVSK*QRRYIITIRTSLHQIAMFLPNLSSRLLQTNEQTPSL 655 MPLLSTRSL K +RR TI+TS QIAMFLPNL RLLQ NEQ P+L Sbjct: 2656 MPLLSTRSLGLKLRRR*KNTIKTSRRQIAMFLPNLLVRLLQRNEQPPTL 2802 Score = 48.3 bits (99), Expect(2) = 4e-18 Identities = 19/35 (54%), Positives = 23/35 (65%) Frame = +2 / +1 Query: 353 YMCWSNRLSPGEEGRRGGPCLYHDSGCIGALPWSW 457 YM + +SPGEEGRR CLYHD+G G + SW Sbjct: 802 YMRRGDCVSPGEEGRRSSLCLYHDAGGTGTVS*SW 906
>LOC_Os02g46700:12002.t04257:unspliced-genomic N-acetyltransferase, putative, expressed| Length = 4243 Score = 36.3 bits (73), Expect(2) = 1e-04 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 / +2 Query: 457 ALRNISEIYLHVQTNNDDAIAFYKKFGFEITETIHNYY 570 ++ N +YLHV + N AI+FY K F++ + ++Y Sbjct: 1046 SISNCRGVYLHVISYNQPAISFYNKMLFKLVRRLPHFY 1159 Score = 29.5 bits (58), Expect(2) = 1e-04 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +3 / +3 Query: 411 VYIMTLGVLAPYRGLGLAEHL 473 +YI+TLGV+ YR LG+ +L Sbjct: 876 LYILTLGVVESYRNLGIGCYL 938
>LOC_Os05g05920:12005.t00482:unspliced-genomic desiccation-related protein PCC13-62 precursor, putative, expressed| Length = 1097 Score = 38.6 bits (78), Expect = 0.060 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 / +3 Query: 194 QRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILPG 307 ++RRP VP PA R +HGA P P QRQ+ G Sbjct: 126 RQRRPAVPREPAAARRCGGVPERHGAHPVPPQRQVRGG 239
>LOC_Os10g35680:12010.t02860:unspliced-genomic acetyltransferase, putative, expressed| Length = 746 Score = 37.3 bits (75), Expect = 0.16 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +1 / +1 Query: 463 RNISEIYLHVQTNNDDAIAFYKKFGFEITETIHNYY 570 R + + LHV A+A Y+K GF++ T+ YY Sbjct: 520 RRVQRVSLHVDPARAAAVALYRKAGFQVDATVVGYY 627
>LOC_Os02g44132:12002.t04003:unspliced-genomic expressed protein| Length = 2746 Score = 36.3 bits (73), Expect = 0.29 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 / +3 Query: 745 LHR*DIIFTLIVFFIPPCSSNLSACLNYLFW 837 L R D+I +++ +P CS L AC++YL W Sbjct: 387 LSRPDLISLVVMIIVPFCSRELYACVDYLAW 479
>LOC_Os08g23430:12008.t02115:unspliced-genomic catalytic/ ribonuclease, putative, expressed| Length = 11180 Score = 35.9 bits (72), Expect = 0.40 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +2 / +3 Query: 410 CLYHDSGCIGALPWSWPCG 466 C HD + LPW WPCG Sbjct: 9738 CYVHDQ*AVSLLPWYWPCG 9794
>LOC_Os12g34270:12012.t03116:unspliced-genomic F-box domain containing protein| Length = 2440 Score = 35.4 bits (71), Expect = 0.55 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +2 / +3 Query: 182 QREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILP 304 QR +RR P P PAG ER A A+ PL+R+ +P Sbjct: 60 QRALRRRAPPHPQLPAGGERRGADHRAVEAVAPPLERRAMP 182
>LOC_Os11g11694:12011.t01056:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5165 Score = 29.9 bits (59), Expect(2) = 1.3 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 / -2 Query: 197 RRRPDVPGRPAGQERDAAQEAQHGALPRP 283 R R D GRP+G R A +A A PRP Sbjct: 2041 RGRSDGRGRPSGTTRQARPQAAATAEPRP 1955 Score = 26.7 bits (52), Expect(2) = 1.3 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 / -1 Query: 362 WSNRLSPGEEGRRGGPCLYHDSGCIG 439 WS RL G E RRGG S G Sbjct: 1637 WSGRLGGGMEERRGGRACRRSSEASG 1560
>LOC_Os06g48570:12006.t04543:unspliced-genomic phosphatase DCR2, putative, expressed| Length = 2571 Score = 34.1 bits (68), Expect = 1.4 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +2 / +3 Query: 194 QRRRPDVPGRPAGQERDAAQEAQHGALP 277 QRRR VPGR AG R A QH A+P Sbjct: 339 QRRRHAVPGRGAGGGRRALLRPQHHAVP 422
>LOC_Os05g03450:12005.t00242:unspliced-genomic carbohydrate binding protein, putative, expressed| Length = 2524 Score = 29.0 bits (57), Expect(2) = 1.7 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 / +3 Query: 197 RRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILPG 307 R R G+P R A QE H LPRP + ++ G Sbjct: 123 RLRDADAGQPQAARRRAPQERHHPPLPRPPRPKLRRG 233 Score = 26.3 bits (51), Expect(2) = 1.7 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = +2 / +2 Query: 359 CWSNRLSPGEEGRRGGPCLYHDSGC 433 CW R G GRR G SGC Sbjct: 1844 CWRWRAGGGRSGRRRGGATTWWSGC 1918
>LOC_Os08g28890:12008.t02645:unspliced-genomic ATP binding protein, putative, expressed| Length = 1561 Score = 33.1 bits (66), Expect = 2.7 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 / +2 Query: 182 QREEQRRRPDVPGRPAGQER 241 QR +RRRP PGRP G+ R Sbjct: 839 QRRRRRRRPRPPGRPRGERR 898
>LOC_Os06g07978:12006.t00680:unspliced-genomic proteasome subunit alpha type 4, putative| Length = 753 Score = 33.1 bits (66), Expect = 2.7 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +2 / +3 Query: 260 QHGALPRPLQRQILPGRH 313 QHGA PRP R +LPG H Sbjct: 261 QHGAPPRPALRPLLPGAH 314
>LOC_Os06g07878:12006.t00670:unspliced-genomic proteasome subunit alpha type 4, putative, expressed| Length = 1584 Score = 33.1 bits (66), Expect = 2.7 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +2 / +3 Query: 260 QHGALPRPLQRQILPGRH 313 QHGA PRP R +LPG H Sbjct: 357 QHGAPPRPALRPLLPGAH 410
>LOC_Os06g07140:12006.t00598:unspliced-genomic proteasome subunit alpha type 4, putative, expressed| Length = 1137 Score = 33.1 bits (66), Expect = 2.7 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +2 / +2 Query: 260 QHGALPRPLQRQILPGRH 313 QHGA PRP R +LPG H Sbjct: 347 QHGAPPRPALRPLLPGAH 400
>LOC_Os03g08160:12003.t00674:unspliced-genomic expressed protein| Length = 3656 Score = 33.1 bits (66), Expect = 2.7 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 / +2 Query: 212 VPGRPAGQERDAAQEAQHGALPRPLQRQILPGRH 313 +PG G+ R A ++ G +PR L RQI+P H Sbjct: 428 LPGTGGGRPRL*ALRSRRGRIPRSLPRQIVPPSH 529
>LOC_Os03g02740:12003.t00163:unspliced-genomic phospholipase D beta 1, putative, expressed| Length = 4070 Score = 33.1 bits (66), Expect = 2.7 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +2 / -2 Query: 359 CWSNRLSPGEEGRRGGPCLYHDSGC 433 CW R SPG RRGG L GC Sbjct: 796 CWGRRRSPGPG*RRGGTWLASPRGC 722
>LOC_Os05g19250:12005.t01691:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4639 Score = 33.1 bits (66), Expect = 2.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 / +2 Query: 720 VMLNLNENEEQTVTRSQLCHKSRDGVCSFVCSSLDDKF 607 V+ ++NEN+E V S+LCH + D + SL KF Sbjct: 2927 VVNHINENDESNVWHSRLCHVNFDCMTRLANMSLIPKF 3040
>LOC_Os01g53910:12001.t04808:unspliced-genomic expressed protein| Length = 1470 Score = 28.6 bits (56), Expect(2) = 3.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 / +3 Query: 182 QREEQRRRPDVPGRPAGQERDA 247 Q+ +RRRP + RP G +RDA Sbjct: 762 QKLRRRRRPGLRRRPRGPQRDA 827 Score = 24.9 bits (48), Expect(2) = 3.4 Identities = 7/13 (53%), Positives = 7/13 (53%) Frame = +2 / +2 Query: 425 SGCIGALPWSWPC 463 S C A PW W C Sbjct: 1154 SACRSARPWGWRC 1192
>LOC_Os12g13300:12012.t01198:unspliced-genomic ATP binding protein, putative, expressed| Length = 1768 Score = 32.7 bits (65), Expect = 3.7 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +2 / -1 Query: 179 EQREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILPG 307 ++R ++RR D G P + +E Q L R + Q+LPG Sbjct: 553 QRRRVRQRRRDAAGEPVVVQVQPPEEQQRAELRRDVPGQVLPG 425
>LOC_Os09g09470:12009.t00739:unspliced-genomic nucleotide binding protein, putative, expressed| Length = 7960 Score = 32.7 bits (65), Expect = 3.7 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 / -1 Query: 647 PSLLL*QSCDLVTVCSSFSLRF 712 P +L +CD+ VC +FSLRF Sbjct: 7291 PPFILAHACDITVVCEAFSLRF 7226
>LOC_Os04g25670:12004.t02274:unspliced-genomic hypothetical protein| Length = 1094 Score = 32.7 bits (65), Expect = 3.7 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = +2 / +3 Query: 230 GQERDAAQEAQHGALPRPLQRQILPGRHXXXXXXXXXXXXXYMCWSNRLSPGEE 391 G+E+ +EA L QR GRH + CWS R+ P E+ Sbjct: 771 GKEKGEGREAGQEGLLISFQRDNEVGRHRWRCSPSVAVAATHSCWSRRVPPPED 932
>LOC_Os02g04680:12002.t00366:unspliced-genomic squamosa promoter-binding-like protein 10, putative, expressed| Length = 4799 Score = 32.7 bits (65), Expect = 3.7 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -1 / -1 Query: 90 SKVCVRCDHGGGCDS 46 + VC CDHGG CDS Sbjct: 2135 ASVCGHCDHGGACDS 2091
>LOC_Os09g25150:12009.t02195:unspliced-genomic dihydroflavonol-4-reductase, putative, expressed| Length = 3187 Score = 31.3 bits (62), Expect(2) = 3.8 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 / +2 Query: 182 QREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQI 298 +R +RR+P GRPA Q H +PR L +++ Sbjct: 1274 RRRPRRRQPRAGGRPAAAADGERQRRAHPQVPRRLGQEV 1390 Score = 23.1 bits (44), Expect(2) = 3.8 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 / +3 Query: 724 ENTRLPWLHR*DIIFTLIVFFIPPCS 801 ++TRL LH *DI L+ CS Sbjct: 1683 DSTRLCRLHA*DIFIALVKHLALVCS 1760
>LOC_Os11g45790:12011.t04106:unspliced-genomic MLA6 protein, putative, expressed| Length = 3545 Score = 29.0 bits (57), Expect(2) = 4.1 Identities = 7/19 (36%), Positives = 10/19 (52%) Frame = +2 / +3 Query: 401 GGPCLYHDSGCIGALPWSW 457 GG C+ + C+ PW W Sbjct: 831 GGSCVMYSGKCVPVTPWMW 887 Score = 25.4 bits (49), Expect(2) = 4.1 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +2 / +1 Query: 191 EQRRRPDVPGRPAGQERDAAQEAQHGALPRPL 286 E+RR R A + DA A+H L RPL Sbjct: 268 EERRPRPHGRRAAARRGDARPRARHRGLRRPL 363
>LOC_Os12g38970:12012.t03577:unspliced-genomic VIP4, putative, expressed| Length = 7546 Score = 32.2 bits (64), Expect = 5.1 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -3 / -3 Query: 727 SQSNVKPQRK*RTNCNKITTLSQEQGRCLLICL*QPGR 614 ++SN+ P+R RT+C + + Q Q + L +C+* G+ Sbjct: 6164 AESNLPPERTKRTSCKSLQHILQLQKQLLNMCI*IQGK 6051
>LOC_Os10g32110:12010.t02531:unspliced-genomic xyloglucan galactosyltransferase KATAMARI 1, putative, expressed| Length = 1597 Score = 32.2 bits (64), Expect = 5.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 / -2 Query: 179 EQREEQRRRPDVPGRPAGQERDAAQEAQ 262 ++RE QRRRP+ GR R A +E + Sbjct: 120 QERERQRRRPEQHGRQVAAARHAGEEGE 37
>LOC_Os10g03660:12010.t00255:unspliced-genomic F-box domain containing protein, expressed| Length = 13737 Score = 32.2 bits (64), Expect = 5.1 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +2 / +2 Query: 197 RRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILP 304 RRR + GR G ++ Q++ PRP RQ+LP Sbjct: 1763 RRRDRLMGRGPGAVQEVRQQSAAAP*PRPRARQVLP 1870
>LOC_Os07g46852:12007.t04590:unspliced-genomic sex determination protein tasselseed-2, putative, expressed| Length = 1511 Score = 32.2 bits (64), Expect = 5.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 182 QREEQRRRPDVPGRPAGQERDAAQEAQHGALPR 280 +R Q R D RP G R A+ A+HGA P+ Sbjct: 677 RRPRQLRPHDGDQRPGGARRHQARRARHGAAPQ 775
>LOC_Os07g10870:12007.t00961:unspliced-genomic conserved hypothetical protein| Length = 1866 Score = 32.2 bits (64), Expect = 5.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 / -1 Query: 176 WEQREEQRRRPDVPGRPAGQERDAAQE 256 W +R E+RRR D PAG+ +A +E Sbjct: 198 WPRRRERRRRLDTVVAPAGEHEEAERE 118
>LOC_Os04g35070:12004.t03179:unspliced-genomic expressed protein| Length = 1022 Score = 32.2 bits (64), Expect = 5.1 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = +2 / -3 Query: 176 WEQREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQI 298 W +R E+RRR P PA A A GAL R I Sbjct: 546 WRRRAEERRRSGEPPSPAAAPLSALTAASPGALTAAPPRSI 424
>LOC_Os01g51140:12001.t04548:unspliced-genomic helix-loop-helix DNA-binding domain containing protein, expressed| Length = 2939 Score = 32.2 bits (64), Expect = 5.1 Identities = 9/27 (33%), Positives = 16/27 (59%) Frame = +3 / +1 Query: 474 GDILTRSDKQRRCHCFLQEVWFRNNRD 554 G ++ RS K+ CH + +WF N ++ Sbjct: 2833 GHLMVRSKKKNGCHLIEENMWFNNGKE 2913
>LOC_Os01g06870:12001.t00568:unspliced-genomic resistance protein SlVe1 precursor, putative, expressed| Length = 1521 Score = 32.2 bits (64), Expect = 5.1 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 / -3 Query: 474 GDILTRSDKQRRCHCFLQEVWFRN 545 G L DK R CHC+LQ +W N Sbjct: 127 GKKLALGDKGRLCHCWLQ*LWSNN 56
>LOC_Os06g44540:12006.t04141:unspliced-genomic protein HOTHEAD precursor, putative, expressed| Length = 3692 Score = 32.2 bits (64), Expect = 5.1 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +1 / -3 Query: 139 GLGRWALGKERQLGATRRAAASPGRPW 219 G GRWA R+ A R +PG PW Sbjct: 498 GRGRWARRPRRRRSARARPTRAPGPPW 418
>LOC_Os11g05840:12011.t00475:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 11267 Score = 25.4 bits (49), Expect(2) = 5.8 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +2 / +3 Query: 182 QREEQRRRPDVPGRPAGQERDAAQEAQHGALPRP 283 +R +RRR D Q R A+E +H PRP Sbjct: 10710 RRLNRRRRRDAAVVEQQQVRARARERRHRRRPRP 10811 Score = 23.5 bits (45), Expect(2) = 5.8 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +1 / +3 Query: 379 AWRRRKEGWSV 411 AWRRR+ W V Sbjct: 10908 AWRRRRRRWGV 10940
>LOC_Os01g02780:12001.t00171:unspliced-genomic TAK33, putative, expressed| Length = 4020 Score = 28.1 bits (55), Expect(2) = 6.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 / -3 Query: 197 RRRPDVPGRPAGQERDAAQEAQHGALPR 280 RRR GRPA + +AA+ A H A+ R Sbjct: 1825 RRRARRAGRPARRRLEAARRAAHRAVRR 1742 Score = 25.8 bits (50), Expect(2) = 6.1 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = +2 / -2 Query: 437 GALPWSWPC 463 G L WSWPC Sbjct: 47 GILQWSWPC 21
>LOC_Os12g26444:12012.t02358:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4957 Score = 31.8 bits (63), Expect = 7.0 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +2 / -1 Query: 581 LHQIAMFLPNLSSRLLQTNEQTPSLLL*QSCDLVTVCSS 697 L Q FLP + ++L PSLL+* S DL+++ SS Sbjct: 154 LPQYFQFLPLSACKVLVATS*PPSLLI*DSSDLISLSSS 38
>LOC_Os09g02250:12009.t00125:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 3301 Score = 31.8 bits (63), Expect = 7.0 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = +2 / +1 Query: 182 QREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILPGRH 313 +R+ +RRP PGRPA Q A + P P + P H Sbjct: 778 RRQRHQRRPARPGRPAPQPPRAQPRRERPLRPHPGEPHPAPQPH 909
>LOC_Os08g25799:12008.t02347:unspliced-genomic myb family transcription factor-related protein, putative,| expressed Length = 8426 Score = 31.8 bits (63), Expect = 7.0 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +2 / +1 Query: 182 QREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILPGR 310 +R +RRR RP R A A G PRPL+R+ P R Sbjct: 160 RRRCRRRRRGEQRRPGTDGRPQAPPAVDGRPPRPLRRRRRPAR 288
>LOC_Os02g28680:12002.t02562:unspliced-genomic expressed protein| Length = 1869 Score = 31.8 bits (63), Expect = 7.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 / -3 Query: 182 QREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILPGR 310 +R +RRRP R A R +Q ALP +R+ P R Sbjct: 160 RRRRRRRRPPQQARAAAGARSQSQSQSQAALPPGRRRRRTPSR 32
>LOC_Os12g06580:12012.t00543:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 1809 Score = 31.8 bits (63), Expect = 7.0 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 / +1 Query: 720 VMLNLNENEEQTVTRSQLCHKSRDGVCSFVCSSLDDKF 607 V+ ++NEN+E V S+LCH + + SL+ KF Sbjct: 1600 VVNHINENDESNVWHSRLCHVNFGCMTRLANMSLNPKF 1713
>LOC_Os07g04990:12007.t00384:unspliced-genomic aldo-keto reductase/ oxidoreductase, putative, expressed| Length = 3242 Score = 31.8 bits (63), Expect = 7.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 / -3 Query: 769 TLIVFFIPPCSSNLSACLNYLFWICGALFPKK 864 T ++F CSS L + +L WIC AL+ K Sbjct: 2736 TALLFLASCCSSYLEILIPFLAWIC*ALYEVK 2641
>LOC_Os02g10830:12002.t00931:unspliced-genomic serine acetyltransferase 3, mitochondrial precursor, putative| Length = 897 Score = 28.1 bits (55), Expect(2) = 7.2 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +1 / -3 Query: 145 GRWALGKERQLGATRRAAASPGRP 216 G W R+ RRAAASPG P Sbjct: 856 GPWIHRPARRRAGPRRAAASPGSP 785 Score = 23.5 bits (45), Expect(2) = 7.2 Identities = 10/20 (50%), Positives = 10/20 (50%) Frame = +2 / -3 Query: 371 RLSPGEEGRRGGPCLYHDSG 430 R G GRRG PC SG Sbjct: 430 RARRGGPGRRGSPCSRGGSG 371
>LOC_Os05g15560:12005.t01327:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4452 Score = 28.6 bits (56), Expect(2) = 9.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 / +2 Query: 346 IVIYVLEQSLVAWRRRKEGW 405 I ++V S++AW RR GW Sbjct: 2861 IRLFVRRTSIIAWSRRNAGW 2920 Score = 24.9 bits (48), Expect(2) = 9.0 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 / +3 Query: 507 RCHCFLQE 530 RCHCFLQ+ Sbjct: 4056 RCHCFLQD 4079
>LOC_Os05g10660:12005.t00900:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3314 Score = 28.6 bits (56), Expect(2) = 9.3 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +3 / -1 Query: 621 GCYKQMSRHRPCSCDRVVILLQFVLHFR*GLTLL*EHEITLAASL 755 GC + S R +C R+++ L R L ++ ++ ITLA L Sbjct: 929 GCLRNPSCLRSSACHRIILA*DLFLKNRFSLGIIGKYHITLAGIL 795 Score = 24.4 bits (47), Expect(2) = 9.3 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +3 / -2 Query: 498 KQRRCHCFLQE 530 + R CHCFL E Sbjct: 2611 RHRTCHCFLSE 2579
>LOC_Os01g56530:12001.t05062:unspliced-genomic LOB domain protein 17, putative, expressed| Length = 1084 Score = 24.9 bits (48), Expect(2) = 9.4 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +2 / +2 Query: 194 QRRRPDVPGRPAGQERDAAQEAQHGALPR 280 +RRR PGR AG+ A GA R Sbjct: 119 RRRRRRGPGRRAGRASSCGAGASRGACSR 205 Score = 23.5 bits (45), Expect(2) = 9.4 Identities = 10/27 (37%), Positives = 12/27 (44%) Frame = +1 / +2 Query: 139 GLGRWALGKERQLGATRRAAASPGRPW 219 G RW + + AAAS G PW Sbjct: 5 GRWRWRTRTHTCMQRSHPAAASAGAPW 85
>LOC_Os10g39100:12010.t03152:unspliced-genomic domain of unknown function DUF614 containing protein, expressed| Length = 2440 Score = 31.3 bits (62), Expect = 9.6 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = -2 / -3 Query: 485 KYISEMFRKAKTTVGRQYTQSHDINTDHPSFLLLQATSDCSNTYITI 345 +Y SE + K T ++ H ++T PSF LLQ + Y+ + Sbjct: 2243 QYQSETSKSPKETRDTSHSHKHYVST*SPSFTLLQKILSMHDLYVEL 2103
>LOC_Os06g28150:12006.t02519:unspliced-genomic FAR1 family protein, expressed| Length = 4418 Score = 31.3 bits (62), Expect = 9.6 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 / +1 Query: 191 LLVAPSCLSFPSAHRPSP 138 L++A SCLS+P A RP P Sbjct: 4006 LILAKSCLSYPMARRPHP 4059
>LOC_Os02g52840:12002.t04864:unspliced-genomic flavonol synthase/flavanone 3-hydroxylase, putative, expressed| Length = 1386 Score = 31.3 bits (62), Expect = 9.6 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +2 / +1 Query: 206 PDVPGRPAGQERDAAQEAQHGALPRPLQRQILPG 307 P VPG A R AA +H PRP +R PG Sbjct: 766 PAVPGAGANPRRRAAHRHEHVHRPRPQRRPGPPG 867
>LOC_Os02g13220:12002.t01119:unspliced-genomic expressed protein| Length = 1308 Score = 31.3 bits (62), Expect = 9.6 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +2 / +3 Query: 194 QRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQILP 304 +RRRP G+ R A + A HG P R++LP Sbjct: 1005 RRRRPRRGAGGGGEHRGARRAAGHGVRAAPQLRRVLP 1115
>LOC_Os01g43800:12001.t03894:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5390 Score = 31.3 bits (62), Expect = 9.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +2 / +1 Query: 176 WEQREEQRRRPDVPGRPAGQERDAAQE 256 WE+R +RR P PAG R A++ Sbjct: 1486 WEERR*ERREGKAPAAPAGNRRSEAKQ 1566
>LOC_Os01g34100:12001.t06806:unspliced-genomic expressed protein| Length = 793 Score = 31.3 bits (62), Expect = 9.6 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +2 / +3 Query: 173 SWEQREEQRRRPDVPGRPAGQERDAAQEAQHGALPRPLQRQIL 301 S E+R ++RRP +P A AA GA P P +R +L Sbjct: 186 SCERRRRRQRRPALPQAAAAAPSLAASGGGGGASPSPHRRPLL 314
>LOC_Os01g19020:12001.t01692:unspliced-genomic peroxidase 1 precursor, putative, expressed| Length = 1631 Score = 31.3 bits (62), Expect = 9.6 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 248 AQEAQHGALPRPLQRQILPGR 310 A A H +PRP Q Q+LPGR Sbjct: 946 AAAADHPGVPRPPQLQVLPGR 1008
>LOC_Os11g23190:12011.t01988:unspliced-genomic hypothetical protein| Length = 2472 Score = 31.3 bits (62), Expect = 9.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 / +1 Query: 796 CSSNLSACLNYLFWICGALFP 858 CS L+ N++FW C LFP Sbjct: 1099 CSFGLANMCNFIFWYCHMLFP 1161
>LOC_Os09g07614:12009.t003544:unspliced-genomic expressed protein| Length = 1006 Score = 31.3 bits (62), Expect = 9.7 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 / -3 Query: 148 RWALGKERQLGATRRAAASPGRPW 219 RW G+ER+ GA + A S GR W Sbjct: 149 RWRRGEERRGGAAAQGAWSDGREW 78
>LOC_Os07g44810:12007.t04121:unspliced-genomic hypothetical protein| Length = 546 Score = 31.3 bits (62), Expect = 9.7 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +1 / +3 Query: 139 GLGRWALGKERQLGATRRAAASP 207 G G W+L K R+ G RAAASP Sbjct: 237 GKGAWSLAKTRKEGRRGRAAASP 305
>LOC_Os06g11840:12006.t01061:unspliced-genomic expressed protein| Length = 4262 Score = 31.3 bits (62), Expect = 9.7 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +1 / -3 Query: 139 GLGRWALGKERQLGATRRAAASPGRP 216 G RW G R G RRA+ SP RP Sbjct: 609 GRRRWGRGCRRSRGTRRRASRSPPRP 532
>LOC_Os02g09250:12002.t00772:unspliced-genomic cytochrome P450 71D10, putative, expressed| Length = 2065 Score = 31.3 bits (62), Expect = 9.7 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +1 / -3 Query: 148 RWALGKERQLGATRRAAASPGRPW 219 RW + A RR A SPGRPW Sbjct: 317 RWGPRRA*ATAAARRRAPSPGRPW 246
>LOC_Os01g09300:12001.t00808:unspliced-genomic iron ion binding protein, putative, expressed| Length = 4585 Score = 31.3 bits (62), Expect = 9.7 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +1 / +1 Query: 763 IFTLIVFFIPPCSSNLSACLNYLFWICGALFPKKKK 870 + T+ FF+ PCSS+L + FWI KK Sbjct: 601 VTTVSFFFLGPCSSSLGWSVEVDFWISAMCIGSTKK 708
>LOC_Os09g37640:12009.t03238:unspliced-genomic ATPUP11, putative, expressed| Length = 1261 Score = 29.5 bits (58), Expect(2) = 9.7 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 / +1 Query: 185 REEQRRRPDVPGRPAGQERDAAQEAQHGALPRP 283 REE+RR G G DAA+ +GA P P Sbjct: 178 REEKRRSTMSVGASDGGHADAARRGGNGASPHP 276 Score = 22.1 bits (42), Expect(2) = 9.7 Identities = 6/7 (85%), Positives = 6/7 (85%) Frame = +2 / +3 Query: 446 PWSWPCG 466 P SWPCG Sbjct: 1122 PCSWPCG 1142 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 308,496,240 Number of extensions: 4601624 Number of successful extensions: 24082 Number of sequences better than 10.0: 59 Length of query: 292 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 243 Effective length of database: 52,856,264 Effective search space: 12844072152 Effective search space used: 12844072152 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
