ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf34k12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062922.1| Oryza sativa (japonica cultivar-group) Os05g0574100 (Os05g0574100) mRNA, complete cds Length = 1526 Score = 170 bits (86), Expect = 1e-38 Identities = 173/202 (85%) Strand = Plus / Plus Query: 715 gtgcaccgtggcttcctatccgtgtacacgtccagtgacaacaactccatgtacaacaag 774 |||||||| |||||||| ||||||||||||||||| |||| |||||| |||||||||| Sbjct: 622 gtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagtacaacaag 681 Query: 775 accagcgccagagagcaggttcttgaggaggtagggaggctgatgaaggagtacaaggag 834 ||||||||||||| |||||||||||||| || ||||||||||| || ||||||||| Sbjct: 682 gccagcgccagagaccaggttcttgaggaagtgaggaggctgatggagttgtacaaggac 741 Query: 835 gaggtgaccagcatcaccgtgaccggccacagccttggcgcgtcgctcgccaccctcacc 894 |||||||| ||||||||||| ||| |||||||| ||||||||||| || ||||| | | Sbjct: 742 gaggtgacgagcatcaccgtcgtcgggcacagcctgggcgcgtcgctggcgaccctgaac 801 Query: 895 gccatcgacatggttgccaacg 916 ||| ||||||| || ||||||| Sbjct: 802 gccgtcgacatcgtggccaacg 823 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Plus Query: 525 gtccaactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggag 584 ||||||||||||||| || || || ||||||||||| ||||| || || || || ||| | Sbjct: 435 gtccaactggatggggtacgtcgccgtggcgacggacgagggcgtcgcggcgctcgggcg 494 Query: 585 gcgcgacatcgtcgtggtgtggcgcggcac 614 ||||||||||||||||| |||||||||||| Sbjct: 495 gcgcgacatcgtcgtggcgtggcgcggcac 524 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 188 ggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtcg 247 |||||||||||||||| || |||||||||||| || ||||| |||||||| ||| ||| Sbjct: 122 ggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacctcg 181 Query: 248 acctccg 254 ||||||| Sbjct: 182 acctccg 188 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 946 ccgccgtgccccgtgacggcgatactgctggcgagcccgcg 986 ||||||||||| ||||||||||| || | ||||||||||| Sbjct: 862 ccgccgtgcccggtgacggcgatcgtgttcgcgagcccgcg 902
>dbj|AK106699.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E01, full insert sequence Length = 1526 Score = 163 bits (82), Expect = 2e-36 Identities = 172/202 (85%) Strand = Plus / Plus Query: 715 gtgcaccgtggcttcctatccgtgtacacgtccagtgacaacaactccatgtacaacaag 774 |||||||| |||||||| ||||||||||||||||| |||| |||||| |||||||||| Sbjct: 622 gtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagtacaacaag 681 Query: 775 accagcgccagagagcaggttcttgaggaggtagggaggctgatgaaggagtacaaggag 834 ||||||||||||| |||||||||||||| || ||||||||||| || ||||||||| Sbjct: 682 gccagcgccagagaccaggttcttgaggaagtgaggaggctgatggagttgtacaaggac 741 Query: 835 gaggtgaccagcatcaccgtgaccggccacagccttggcgcgtcgctcgccaccctcacc 894 |||||| | ||||||||||| ||| |||||||| ||||||||||| || ||||| | | Sbjct: 742 gaggtgtcgagcatcaccgtcgtcgggcacagcctgggcgcgtcgctggcgaccctgaac 801 Query: 895 gccatcgacatggttgccaacg 916 ||| ||||||| || ||||||| Sbjct: 802 gccgtcgacatcgtggccaacg 823 Score = 75.8 bits (38), Expect = 4e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 525 gtccaactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggag 584 ||||||||||||||| || || || ||||||||||| |||| || || || || ||| | Sbjct: 435 gtccaactggatggggtacgtcgccgtggcgacggacgaggccgtcgcggcgctcgggcg 494 Query: 585 gcgcgacatcgtcgtggtgtggcgcggcac 614 ||||||||||||||||| |||||||||||| Sbjct: 495 gcgcgacatcgtcgtggcgtggcgcggcac 524 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 188 ggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtcg 247 |||||||||||||||| || |||||||||||| || ||||| |||||||| ||| ||| Sbjct: 122 ggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacctcg 181 Query: 248 acctccg 254 ||||||| Sbjct: 182 acctccg 188 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 946 ccgccgtgccccgtgacggcgatactgctggcgagcccgcg 986 ||||||||||| ||||||||||| || | ||||||||||| Sbjct: 862 ccgccgtgcccggtgacggcgatcgtgttcgcgagcccgcg 902
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 95.6 bits (48), Expect = 5e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 789 gcaggttcttgaggaggtagggaggctgatgaaggagtacaaggaggaggtgaccagcat 848 ||||||||||||||| || ||||||||||| || ||||||||| |||||||| ||||| Sbjct: 163679 gcaggttcttgaggaagtgaggaggctgatggagttgtacaaggacgaggtgacgagcat 163620 Query: 849 caccgtgaccggccacagccttggcgcgtcgctcgccaccctcaccgccatcgacatggt 908 |||||| ||| |||||||| ||||||||||| || ||||| | |||| ||||||| || Sbjct: 163619 caccgtcgtcgggcacagcctgggcgcgtcgctggcgaccctgaacgccgtcgacatcgt 163560 Query: 909 tgccaacg 916 ||||||| Sbjct: 163559 ggccaacg 163552 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 715 gtgcaccgtggcttcctatccgtgtacacgtccagtgacaacaactccatgtacaacaag 774 |||||||| |||||||| ||||||||||||||||| |||| |||||| |||||||||| Sbjct: 166561 gtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagtacaacaag 166502 Query: 775 accagcgccagagagcaggt 794 ||||||||||||| ||||| Sbjct: 166501 gccagcgccagagaccaggt 166482 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 525 gtccaactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggag 584 ||||||||||||||| || || || ||||||||||| ||||| || || || || ||| | Sbjct: 166748 gtccaactggatggggtacgtcgccgtggcgacggacgagggcgtcgcggcgctcgggcg 166689 Query: 585 gcgcgacatcgtcgtggtgtggcgcggcac 614 ||||||||||||||||| |||||||||||| Sbjct: 166688 gcgcgacatcgtcgtggcgtggcgcggcac 166659 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 188 ggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtcg 247 |||||||||||||||| || |||||||||||| || ||||| |||||||| ||| ||| Sbjct: 167061 ggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacctcg 167002 Query: 248 acctccg 254 ||||||| Sbjct: 167001 acctccg 166995 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 586 cgcgacatcgtcgtggtgtggcgcggcac 614 |||||||||||||| | |||||||||||| Sbjct: 161900 cgcgacatcgtcgtcgcgtggcgcggcac 161928 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 946 ccgccgtgccccgtgacggcgatactgctggcgagcccgcg 986 ||||||||||| ||||||||||| || | ||||||||||| Sbjct: 163513 ccgccgtgcccggtgacggcgatcgtgttcgcgagcccgcg 163473
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 95.6 bits (48), Expect = 5e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 789 gcaggttcttgaggaggtagggaggctgatgaaggagtacaaggaggaggtgaccagcat 848 ||||||||||||||| || ||||||||||| || ||||||||| |||||||| ||||| Sbjct: 14361 gcaggttcttgaggaagtgaggaggctgatggagttgtacaaggacgaggtgacgagcat 14302 Query: 849 caccgtgaccggccacagccttggcgcgtcgctcgccaccctcaccgccatcgacatggt 908 |||||| ||| |||||||| ||||||||||| || ||||| | |||| ||||||| || Sbjct: 14301 caccgtcgtcgggcacagcctgggcgcgtcgctggcgaccctgaacgccgtcgacatcgt 14242 Query: 909 tgccaacg 916 ||||||| Sbjct: 14241 ggccaacg 14234 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 715 gtgcaccgtggcttcctatccgtgtacacgtccagtgacaacaactccatgtacaacaag 774 |||||||| |||||||| ||||||||||||||||| |||| |||||| |||||||||| Sbjct: 17243 gtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagtacaacaag 17184 Query: 775 accagcgccagagagcaggt 794 ||||||||||||| ||||| Sbjct: 17183 gccagcgccagagaccaggt 17164 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 525 gtccaactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggag 584 ||||||||||||||| || || || ||||||||||| ||||| || || || || ||| | Sbjct: 17430 gtccaactggatggggtacgtcgccgtggcgacggacgagggcgtcgcggcgctcgggcg 17371 Query: 585 gcgcgacatcgtcgtggtgtggcgcggcac 614 ||||||||||||||||| |||||||||||| Sbjct: 17370 gcgcgacatcgtcgtggcgtggcgcggcac 17341 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 188 ggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtcg 247 |||||||||||||||| || |||||||||||| || ||||| |||||||| ||| ||| Sbjct: 17743 ggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacctcg 17684 Query: 248 acctccg 254 ||||||| Sbjct: 17683 acctccg 17677 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 586 cgcgacatcgtcgtggtgtggcgcggcac 614 |||||||||||||| | |||||||||||| Sbjct: 12582 cgcgacatcgtcgtcgcgtggcgcggcac 12610 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 946 ccgccgtgccccgtgacggcgatactgctggcgagcccgcg 986 ||||||||||| ||||||||||| || | ||||||||||| Sbjct: 14195 ccgccgtgcccggtgacggcgatcgtgttcgcgagcccgcg 14155
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 95.6 bits (48), Expect = 5e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 789 gcaggttcttgaggaggtagggaggctgatgaaggagtacaaggaggaggtgaccagcat 848 ||||||||||||||| || ||||||||||| || ||||||||| |||||||| ||||| Sbjct: 28379437 gcaggttcttgaggaagtgaggaggctgatggagttgtacaaggacgaggtgacgagcat 28379378 Query: 849 caccgtgaccggccacagccttggcgcgtcgctcgccaccctcaccgccatcgacatggt 908 |||||| ||| |||||||| ||||||||||| || ||||| | |||| ||||||| || Sbjct: 28379377 caccgtcgtcgggcacagcctgggcgcgtcgctggcgaccctgaacgccgtcgacatcgt 28379318 Query: 909 tgccaacg 916 ||||||| Sbjct: 28379317 ggccaacg 28379310 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 715 gtgcaccgtggcttcctatccgtgtacacgtccagtgacaacaactccatgtacaacaag 774 |||||||| |||||||| ||||||||||||||||| |||| |||||| |||||||||| Sbjct: 28382319 gtgcaccggggcttcctgtccgtgtacacgtccagcaacaaggactccaagtacaacaag 28382260 Query: 775 accagcgccagagagcaggt 794 ||||||||||||| ||||| Sbjct: 28382259 gccagcgccagagaccaggt 28382240 Score = 83.8 bits (42), Expect = 2e-12 Identities = 78/90 (86%) Strand = Plus / Minus Query: 525 gtccaactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggag 584 ||||||||||||||| || || || ||||||||||| ||||| || || || || ||| | Sbjct: 28382506 gtccaactggatggggtacgtcgccgtggcgacggacgagggcgtcgcggcgctcgggcg 28382447 Query: 585 gcgcgacatcgtcgtggtgtggcgcggcac 614 ||||||||||||||||| |||||||||||| Sbjct: 28382446 gcgcgacatcgtcgtggcgtggcgcggcac 28382417 Score = 61.9 bits (31), Expect = 6e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 188 ggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtcg 247 |||||||||||||||| || |||||||||||| || ||||| |||||||| ||| ||| Sbjct: 28382819 ggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacctcg 28382760 Query: 248 acctccg 254 ||||||| Sbjct: 28382759 acctccg 28382753 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 586 cgcgacatcgtcgtggtgtggcgcggcac 614 |||||||||||||| | |||||||||||| Sbjct: 28377658 cgcgacatcgtcgtcgcgtggcgcggcac 28377686 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 946 ccgccgtgccccgtgacggcgatactgctggcgagcccgcg 986 ||||||||||| ||||||||||| || | ||||||||||| Sbjct: 28379271 ccgccgtgcccggtgacggcgatcgtgttcgcgagcccgcg 28379231
>ref|NM_001050269.1| Oryza sativa (japonica cultivar-group) Os01g0651800 (Os01g0651800) mRNA, complete cds Length = 1576 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 843 cagcatcaccgtgaccggccacagccttggcgcgtcgctcgccaccctcaccgccatcga 902 |||||||||| | || ||||||||||| ||||| ||||| |||| |||| ||||||||| Sbjct: 827 cagcatcaccataacgggccacagcctgggcgccgcgctctccacgctcaacgccatcga 886 Query: 903 catggttgccaacg 916 ||| || ||||||| Sbjct: 887 catcgtcgccaacg 900
>ref|NM_001050265.1| Oryza sativa (japonica cultivar-group) Os01g0651200 (Os01g0651200) mRNA, complete cds Length = 1257 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 826 tacaaggaggaggtgaccagcatcaccgtgaccggccacagccttggcgc 875 |||||||| |||| ||||||||||||||| | |||||||||||| ||||| Sbjct: 658 tacaaggacgaggagaccagcatcaccgtcatcggccacagcctgggcgc 707 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 232 gacccgctggacgtcgacctccgacgctccatcatcgcttacggcgag 279 ||||||||||||||||||||||| |||| | ||||| | ||||||||| Sbjct: 55 gacccgctggacgtcgacctccgccgctgcctcatcacctacggcgag 102 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 528 caactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggaggcg 587 |||||||||||| || || || ||||| ||||| ||||| | || || || ||| |||| Sbjct: 318 caactggatggggtacgtcgccgtggccacggacgagggcgccgccgcgctcgggcggcg 377 Query: 588 cgacatcgtcgtggtgtggcgcggcac 614 ||||||||| |||| |||||||||||| Sbjct: 378 cgacatcgtggtggcgtggcgcggcac 404
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 826 tacaaggaggaggtgaccagcatcaccgtgaccggccacagccttggcgc 875 |||||||| |||| ||||||||||||||| | |||||||||||| ||||| Sbjct: 26295576 tacaaggacgaggagaccagcatcaccgtcatcggccacagcctgggcgc 26295625 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 843 cagcatcaccgtgaccggccacagccttggcgcgtcgctcgccaccctcaccgccatcga 902 |||||||||| | || ||||||||||| ||||| ||||| |||| |||| ||||||||| Sbjct: 26317278 cagcatcaccataacgggccacagcctgggcgccgcgctctccacgctcaacgccatcga 26317337 Query: 903 catggttgccaacg 916 ||| || ||||||| Sbjct: 26317338 catcgtcgccaacg 26317351 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 232 gacccgctggacgtcgacctccgacgctccatcatcgcttacggcgag 279 ||||||||||||||||||||||| |||| | ||||| | ||||||||| Sbjct: 26293506 gacccgctggacgtcgacctccgccgctgcctcatcacctacggcgag 26293553 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 528 caactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggaggcg 587 |||||||||||| || || || ||||| ||||| ||||| | || || || ||| |||| Sbjct: 26293769 caactggatggggtacgtcgccgtggccacggacgagggcgccgccgcgctcgggcggcg 26293828 Query: 588 cgacatcgtcgtggtgtggcgcggcac 614 ||||||||| |||| |||||||||||| Sbjct: 26293829 cgacatcgtggtggcgtggcgcggcac 26293855 Score = 54.0 bits (27), Expect = 0.002 Identities = 132/167 (79%) Strand = Plus / Minus Query: 187 cggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtc 246 |||||| | |||||||||||| |||| |||||||| ||||| ||||| || |||| | Sbjct: 26380135 cggtggagggagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgcc 26380076 Query: 247 gacctccgacgctccatcatcgcttacggcgagcttgcgtcggccgcccacgacgggttc 306 |||||||| ||| | |||||| ||||||||||| ||| |||| || |||||| |||| Sbjct: 26380075 gacctccggcgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttc 26380016 Query: 307 aacctcgagaagcggtcaccgcatgccggcttgtgcctgtatagccg 353 | || |||| | |||| ||||| |||||| ||||| ||| ||||| Sbjct: 26380015 atccgcgaggcgtggtcgccgcacgccggcgcgtgccggtacagccg 26379969 Score = 48.1 bits (24), Expect = 0.098 Identities = 72/88 (81%) Strand = Plus / Minus Query: 529 aactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggaggcgc 588 ||||||||||| || ||||| ||||||||||| | || || || || ||||| |||||| Sbjct: 26379838 aactggatggggtacgtggccgtggcgacggacgccggggtggccgcgctgggcaggcgc 26379779 Query: 589 gacatcgtcgtggtgtggcgcggcaccg 616 ||| | || || | |||||||||||||| Sbjct: 26379778 gacgtggtggtcgcgtggcgcggcaccg 26379751 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Minus Query: 824 agtacaaggaggaggtgaccagcatcaccgt 854 |||||||||| |||| ||||||||||||||| Sbjct: 26377582 agtacaaggacgaggagaccagcatcaccgt 26377552 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 862 cacagccttggcgcgtcgctcgccac 887 |||||||| ||||||||||||||||| Sbjct: 29525221 cacagcctcggcgcgtcgctcgccac 29525196
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 826 tacaaggaggaggtgaccagcatcaccgtgaccggccacagccttggcgc 875 |||||||| |||| ||||||||||||||| | |||||||||||| ||||| Sbjct: 108257 tacaaggacgaggagaccagcatcaccgtcatcggccacagcctgggcgc 108306 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 843 cagcatcaccgtgaccggccacagccttggcgcgtcgctcgccaccctcaccgccatcga 902 |||||||||| | || ||||||||||| ||||| ||||| |||| |||| ||||||||| Sbjct: 129959 cagcatcaccataacgggccacagcctgggcgccgcgctctccacgctcaacgccatcga 130018 Query: 903 catggttgccaacg 916 ||| || ||||||| Sbjct: 130019 catcgtcgccaacg 130032 Score = 56.0 bits (28), Expect = 4e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 232 gacccgctggacgtcgacctccgacgctccatcatcgcttacggcgag 279 ||||||||||||||||||||||| |||| | ||||| | ||||||||| Sbjct: 106187 gacccgctggacgtcgacctccgccgctgcctcatcacctacggcgag 106234 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 528 caactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggaggcg 587 |||||||||||| || || || ||||| ||||| ||||| | || || || ||| |||| Sbjct: 106450 caactggatggggtacgtcgccgtggccacggacgagggcgccgccgcgctcgggcggcg 106509 Query: 588 cgacatcgtcgtggtgtggcgcggcac 614 ||||||||| |||| |||||||||||| Sbjct: 106510 cgacatcgtggtggcgtggcgcggcac 106536
>dbj|AK102737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C14, full insert sequence Length = 1577 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 843 cagcatcaccgtgaccggccacagccttggcgcgtcgctcgccaccctcaccgccatcga 902 |||||||||| | || ||||||||||| ||||| ||||| |||| |||| ||||||||| Sbjct: 828 cagcatcaccataacgggccacagcctgggcgccgcgctctccacgctcaacgccatcga 887 Query: 903 catggttgccaacg 916 ||| || ||||||| Sbjct: 888 catcgtcgccaacg 901
>gb|BT009343.1| Triticum aestivum clone wlm4.pk0021.h10:fis, full insert mRNA sequence Length = 1639 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 856 accggccacagccttggcgcgtcgctcgccaccctcaccgccatcgacatggttgccaac 915 ||||| |||||||| ||||||||||| ||||| ||| |||| |||||||||| |||||| Sbjct: 750 accgggcacagcctcggcgcgtcgctggccacactctgcgccttcgacatggtggccaac 809 Query: 916 g 916 | Sbjct: 810 g 810
>ref|NM_001050272.1| Oryza sativa (japonica cultivar-group) Os01g0652300 (Os01g0652300) mRNA, complete cds Length = 707 Score = 54.0 bits (27), Expect = 0.002 Identities = 132/167 (79%) Strand = Plus / Plus Query: 187 cggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtc 246 |||||| | |||||||||||| |||| |||||||| ||||| ||||| || |||| | Sbjct: 161 cggtggagggagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgcc 220 Query: 247 gacctccgacgctccatcatcgcttacggcgagcttgcgtcggccgcccacgacgggttc 306 |||||||| ||| | |||||| ||||||||||| ||| |||| || |||||| |||| Sbjct: 221 gacctccggcgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttc 280 Query: 307 aacctcgagaagcggtcaccgcatgccggcttgtgcctgtatagccg 353 | || |||| | |||| ||||| |||||| ||||| ||| ||||| Sbjct: 281 atccgcgaggcgtggtcgccgcacgccggcgcgtgccggtacagccg 327
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 54.0 bits (27), Expect = 0.002 Identities = 132/167 (79%) Strand = Plus / Minus Query: 187 cggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtc 246 |||||| | |||||||||||| |||| |||||||| ||||| ||||| || |||| | Sbjct: 54000 cggtggagggagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgcc 53941 Query: 247 gacctccgacgctccatcatcgcttacggcgagcttgcgtcggccgcccacgacgggttc 306 |||||||| ||| | |||||| ||||||||||| ||| |||| || |||||| |||| Sbjct: 53940 gacctccggcgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttc 53881 Query: 307 aacctcgagaagcggtcaccgcatgccggcttgtgcctgtatagccg 353 | || |||| | |||| ||||| |||||| ||||| ||| ||||| Sbjct: 53880 atccgcgaggcgtggtcgccgcacgccggcgcgtgccggtacagccg 53834 Score = 48.1 bits (24), Expect = 0.098 Identities = 72/88 (81%) Strand = Plus / Minus Query: 529 aactggatgggttatgtggcggtggcgacggaggagggagttgcagcactggggaggcgc 588 ||||||||||| || ||||| ||||||||||| | || || || || ||||| |||||| Sbjct: 53703 aactggatggggtacgtggccgtggcgacggacgccggggtggccgcgctgggcaggcgc 53644 Query: 589 gacatcgtcgtggtgtggcgcggcaccg 616 ||| | || || | |||||||||||||| Sbjct: 53643 gacgtggtggtcgcgtggcgcggcaccg 53616 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Minus Query: 824 agtacaaggaggaggtgaccagcatcaccgt 854 |||||||||| |||| ||||||||||||||| Sbjct: 51447 agtacaaggacgaggagaccagcatcaccgt 51417
>dbj|AK063136.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-G02, full insert sequence Length = 705 Score = 54.0 bits (27), Expect = 0.002 Identities = 132/167 (79%) Strand = Plus / Plus Query: 187 cggtggcgcgagctccacggctcggactcgtggaaggggctcctggacccgctggacgtc 246 |||||| | |||||||||||| |||| |||||||| ||||| ||||| || |||| | Sbjct: 161 cggtggagggagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgcc 220 Query: 247 gacctccgacgctccatcatcgcttacggcgagcttgcgtcggccgcccacgacgggttc 306 |||||||| ||| | |||||| ||||||||||| ||| |||| || |||||| |||| Sbjct: 221 gacctccggcgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttc 280 Query: 307 aacctcgagaagcggtcaccgcatgccggcttgtgcctgtatagccg 353 | || |||| | |||| ||||| |||||| ||||| ||| ||||| Sbjct: 281 atccgcgaggcgtggtcgccgcacgccggcgcgtgccggtacagccg 327
>ref|NM_001063416.1| Oryza sativa (japonica cultivar-group) Os06g0160700 (Os06g0160700) mRNA, complete cds Length = 2623 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 405 cgcgcccacgcagtcgccggcgccggcgccga 436
>ref|NM_001052726.1| Oryza sativa (japonica cultivar-group) Os02g0196100 (Os02g0196100) mRNA, partial cds Length = 976 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 131 cgcccacgccgtcgccagcgccggcgccgaag 162 ||||||||||| |||| ||||||||||||||| Sbjct: 730 cgcccacgccggcgccggcgccggcgccgaag 761
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 48.1 bits (24), Expect = 0.098 Identities = 24/24 (100%) Strand = Plus / Minus Query: 279 gcttgcgtcggccgcccacgacgg 302 |||||||||||||||||||||||| Sbjct: 3706384 gcttgcgtcggccgcccacgacgg 3706361
>gb|AY299404.1| Oryza sativa (indica cultivar-group) soluble starch synthase I precursor, mRNA, complete cds Length = 2547 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 309 cgcgcccacgcagtcgccggcgccggcgccga 340
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Minus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 3085396 cgcgcccacgcagtcgccggcgccggcgccga 3085365 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Minus Query: 133 cccacgccgtcgccagcgccggcgccg 159 ||||||||| ||||||||||||||||| Sbjct: 23055932 cccacgccggcgccagcgccggcgccg 23055906
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Minus Query: 131 cgcccacgccgtcgccagcgccggcgccgaag 162 ||||||||||| |||| ||||||||||||||| Sbjct: 5364696 cgcccacgccggcgccggcgccggcgccgaag 5364665
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Minus Query: 131 cgcccacgccgtcgccagcgccggcgccgaag 162 ||||||||||| |||| ||||||||||||||| Sbjct: 18277 cgcccacgccggcgccggcgccggcgccgaag 18246
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Minus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 39581 cgcgcccacgcagtcgccggcgccggcgccga 39550
>dbj|AK109458.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C03, full insert sequence Length = 2623 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 405 cgcgcccacgcagtcgccggcgccggcgccga 436
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Minus Query: 131 cgcccacgccgtcgccagcgccggcgccgaag 162 ||||||||||| |||| ||||||||||||||| Sbjct: 90999 cgcccacgccggcgccggcgccggcgccgaag 90968
>dbj|AK108729.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D01, full insert sequence Length = 976 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 131 cgcccacgccgtcgccagcgccggcgccgaag 162 ||||||||||| |||| ||||||||||||||| Sbjct: 730 cgcccacgccggcgccggcgccggcgccgaag 761
>dbj|D16202.1|RICSSS Oryza sativa mRNA for soluble starch synthase, complete cds Length = 2533 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 326 cgcgcccacgcagtcgccggcgccggcgccga 357
>gb|AF165890.1|AF165890 Oryza sativa subsp. japonica soluble starch synthase mRNA, complete cds Length = 2585 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 351 cgcgcccacgcagtcgccggcgccggcgccga 382
>dbj|D38221.1|RICE1 Rice gene for soluble starch synthase (SSS1), complete cds (exon1-15) Length = 8900 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 cgcgcccacgccgtcgccagcgccggcgccga 160 ||||||||||| |||||| ||||||||||||| Sbjct: 1366 cgcgcccacgcagtcgccggcgccggcgccga 1397
>ref|XM_751378.1| Ustilago maydis 521 hypothetical protein (UM00324.1) partial mRNA Length = 897 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 694 gacgagtacaggaacgccgaggt 716 ||||||||||||||||||||||| Sbjct: 748 gacgagtacaggaacgccgaggt 770
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Minus Query: 133 cccacgccgtcgccagcgccggcgccg 159 ||||||||| ||||||||||||||||| Sbjct: 122476 cccacgccggcgccagcgccggcgccg 122450
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Minus Query: 133 cccacgccgtcgccagcgccggcgccg 159 ||||||||| ||||||||||||||||| Sbjct: 6580 cccacgccggcgccagcgccggcgccg 6554
>ref|NM_001050576.1| Oryza sativa (japonica cultivar-group) Os01g0710700 (Os01g0710700) mRNA, complete cds Length = 1920 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 862 cacagccttggcgcgtcgctcgccac 887 |||||||| ||||||||||||||||| Sbjct: 801 cacagcctcggcgcgtcgctcgccac 826
>ref|XR_009784.1| PREDICTED: Macaca mulatta similar to Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting subunit) (p50Cdc37) (CDC37), mRNA Length = 1192 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 817 atgaaggagtacaaggaggagg 838 |||||||||||||||||||||| Sbjct: 874 atgaaggagtacaaggaggagg 895
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 gccgtcgccagcgccggcgccg 159 |||||||||||||||||||||| Sbjct: 29129420 gccgtcgccagcgccggcgccg 29129399
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 862 cacagccttggcgcgtcgctcgccac 887 |||||||| ||||||||||||||||| Sbjct: 91495 cacagcctcggcgcgtcgctcgccac 91470
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 gccgtcgccagcgccggcgccg 159 |||||||||||||||||||||| Sbjct: 64538 gccgtcgccagcgccggcgccg 64517
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 gccgtcgccagcgccggcgccg 159 |||||||||||||||||||||| Sbjct: 77377 gccgtcgccagcgccggcgccg 77356
>dbj|AK106129.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F09, full insert sequence Length = 1810 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 862 cacagccttggcgcgtcgctcgccac 887 |||||||| ||||||||||||||||| Sbjct: 802 cacagcctcggcgcgtcgctcgccac 827
>dbj|AK104373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F02, full insert sequence Length = 1810 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 862 cacagccttggcgcgtcgctcgccac 887 |||||||| ||||||||||||||||| Sbjct: 802 cacagcctcggcgcgtcgctcgccac 827
>dbj|AK098952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055J12, full insert sequence Length = 1805 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 862 cacagccttggcgcgtcgctcgccac 887 |||||||| ||||||||||||||||| Sbjct: 801 cacagcctcggcgcgtcgctcgccac 826
>dbj|AK069577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022J10, full insert sequence Length = 1921 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 862 cacagccttggcgcgtcgctcgccac 887 |||||||| ||||||||||||||||| Sbjct: 802 cacagcctcggcgcgtcgctcgccac 827
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 708 cgccgaggtgcaccgtggcttc 729 |||||||||||||||||||||| Sbjct: 1722143 cgccgaggtgcaccgtggcttc 1722164
>ref|NM_001039005.1| Rattus norvegicus mucolipin 2 (Mcoln2), mRNA gb|BC099787.1| Rattus norvegicus mucolipin 2, mRNA (cDNA clone MGC:124828 IMAGE:7934506), complete cds Length = 2547 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 810 gaggctgatgaaggagtacaag 831 |||||||||||||||||||||| Sbjct: 1528 gaggctgatgaaggagtacaag 1507
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 gccgtcgccagcgccggcgccg 159 |||||||||||||||||||||| Sbjct: 2767988 gccgtcgccagcgccggcgccg 2767967
>gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from chromosome V near 69 cM, complete sequence Length = 105223 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 tcaacggtgtcgaggttggcga 457 |||||||||||||||||||||| Sbjct: 35872 tcaacggtgtcgaggttggcga 35893
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 acgccgtcgccagcgccggcg 156 ||||||||||||||||||||| Sbjct: 4354046 acgccgtcgccagcgccggcg 4354026
>ref|NM_001067662.1| Oryza sativa (japonica cultivar-group) Os08g0178200 (Os08g0178200) mRNA, complete cds Length = 2058 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 cgcccacgccgtcgccagcgccggcgccg 159 |||||||| ||||||| |||||||||||| Sbjct: 1569 cgcccacgacgtcgccggcgccggcgccg 1597
>ref|NM_001062921.1| Oryza sativa (japonica cultivar-group) Os05g0574000 (Os05g0574000) mRNA, complete cds Length = 1236 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 586 cgcgacatcgtcgtggtgtggcgcggcac 614 |||||||||||||| | |||||||||||| Sbjct: 409 cgcgacatcgtcgtcgcgtggcgcggcac 437
>ref|NM_001058920.1| Oryza sativa (japonica cultivar-group) Os04g0289500 (Os04g0289500) mRNA, complete cds Length = 531 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 133 cccacgccgtcgccagcgccggcgc 157 ||||||||| ||||||||||||||| Sbjct: 307 cccacgccgccgccagcgccggcgc 283
>gb|DQ658286.1| Emiliania huxleyi clone Plate1_E13_compl;77-2-7-H02 aminobutyrate aminotransferase-like mRNA sequence Length = 1727 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 ggcggtggcgacggaggaggg 566 ||||||||||||||||||||| Sbjct: 35 ggcggtggcgacggaggaggg 55
>ref|XM_966470.1| PREDICTED: Tribolium castaneum similar to CG2079-PA (LOC660219), mRNA Length = 1422 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 711 cgaggtgcaccgtggcttcct 731 ||||||||||||||||||||| Sbjct: 15 cgaggtgcaccgtggcttcct 35
>gb|AC125021.12| Mus musculus chromosome 1, clone RP24-212P5, complete sequence Length = 174626 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 642 caaggactgccgtcaggtgtc 662 ||||||||||||||||||||| Sbjct: 39386 caaggactgccgtcaggtgtc 39366
>emb|CR703753.2|CNS0G5YT Tetraodon nigroviridis full-length cDNA Length = 1117 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 ccacgccgtcgccagcgccggcgcc 158 ||||||||||||| ||||||||||| Sbjct: 588 ccacgccgtcgccggcgccggcgcc 612
>emb|CR702914.2|CNS0G5BI Tetraodon nigroviridis full-length cDNA Length = 1135 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 ccacgccgtcgccagcgccggcgcc 158 ||||||||||||| ||||||||||| Sbjct: 599 ccacgccgtcgccggcgccggcgcc 623
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 cgcccacgccgtcgccagcgccggcgccg 159 |||||||| ||||||| |||||||||||| Sbjct: 4576656 cgcccacgacgtcgccggcgccggcgccg 4576684
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 133 cccacgccgtcgccagcgccggcgc 157 ||||||||| ||||||||||||||| Sbjct: 12638597 cccacgccgccgccagcgccggcgc 12638573
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 tcgccagcgccggcgccgaag 162 ||||||||||||||||||||| Sbjct: 84608 tcgccagcgccggcgccgaag 84588
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 cgcccacgccgtcgccagcgccggcgccg 159 |||||||| ||||||| |||||||||||| Sbjct: 100504 cgcccacgacgtcgccggcgccggcgccg 100532
>dbj|AK193328.1| Mus musculus cDNA, clone:Y1G0111N17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000020576, based on BLAT search Length = 152 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1504 tgtttgcatttcaatcatttt 1524 ||||||||||||||||||||| Sbjct: 147 tgtttgcatttcaatcatttt 127
>dbj|AK072269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O22, full insert sequence Length = 1743 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 cgcccacgccgtcgccagcgccggcgccg 159 |||||||| ||||||| |||||||||||| Sbjct: 1570 cgcccacgacgtcgccggcgccggcgccg 1598
>dbj|AK070877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065C06, full insert sequence Length = 2059 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 131 cgcccacgccgtcgccagcgccggcgccg 159 |||||||| ||||||| |||||||||||| Sbjct: 1570 cgcccacgacgtcgccggcgccggcgccg 1598
>ref|XM_759633.1| Theileria parva strain Muguga coatomer subunit alpha (TP02_0162) partial mRNA Length = 4077 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1536 gtatgtggagtagatgacggc 1556 ||||||||||||||||||||| Sbjct: 2052 gtatgtggagtagatgacggc 2032
>ref|NM_208603.1| Eremothecium gossypii ACL154Wp (ACL154W), mRNA Length = 960 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 tcgccagcgccggcgccgaag 162 ||||||||||||||||||||| Sbjct: 647 tcgccagcgccggcgccgaag 627
>emb|AL731633.2|OSJN00280 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0096E05, complete sequence Length = 129908 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 133 cccacgccgtcgccagcgccggcgc 157 ||||||||| ||||||||||||||| Sbjct: 53583 cccacgccgccgccagcgccggcgc 53559 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 209,223,187 Number of extensions: 10441214 Number of successful extensions: 213026 Number of sequences better than 10.0: 64 Number of HSP's gapped: 213024 Number of HSP's successfully gapped: 100 Length of query: 1581 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1558 Effective length of database: 18,503,978,556 Effective search space: 28829198590248 Effective search space used: 28829198590248 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
