ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34j17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001066198.1| Oryza sativa (japonica cultivar-group) Os07g... 545 e-151
2dbj|AK068175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-151
3dbj|AK063998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-151
4gb|AY105276.1| Zea mays PCO109481 mRNA sequence 311 4e-81
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 262 3e-66
6dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic D... 262 3e-66
7gb|AC146615.2| Mus musculus BAC clone RP23-19K2 from chromosome ... 50 0.022
8gb|AC122391.4| Mus musculus BAC clone RP24-81C18 from 14, comple... 50 0.022
9ref|NM_203244.1| Arabidopsis thaliana Rho GTPase activator (AT5G... 46 0.35
10ref|NM_125546.1| Arabidopsis thaliana Rho GTPase activator (AT5G... 46 0.35
11gb|AY133882.1| Arabidopsis thaliana clone U10143 unknown protein... 46 0.35
12gb|AY045924.1| Arabidopsis thaliana unknown protein (At5g61530) ... 46 0.35
13gb|AY085460.1| Arabidopsis thaliana clone 152557 mRNA, complete ... 46 0.35
14emb|BX831842.1|CNS0A1ZG Arabidopsis thaliana Full-length cDNA Co... 46 0.35
15emb|BX831138.1|CNS0A1RB Arabidopsis thaliana Full-length cDNA Co... 46 0.35
16gb|AC166602.2| Eulemur macaco macaco clone CH273-138L3, complete... 44 1.4
17emb|CR925808.19| Zebrafish DNA sequence from clone DKEY-200L5 in... 44 1.4
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.4
19gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E... 44 1.4
20dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 1.4
21dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone... 44 1.4
22emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chro... 44 1.4
23gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosom... 44 1.4
24gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome... 44 1.4
25emb|CU137657.2| Medicago truncatula chromosome 5 clone mte1-29c1... 42 5.4
26gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete s... 42 5.4
27ref|NM_001029878.1| Mus musculus LON peptidase N-terminal domain... 42 5.4
28gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 5.4
29gb|AC182734.3| Pan troglodytes BAC clone CH251-356H17 from chrom... 42 5.4
30gb|AC158548.10| Mus musculus chromosome 5, clone RP23-258F17, co... 42 5.4
31gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, com... 42 5.4
32ref|XM_653478.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 5.4
33gb|AC120861.7| Mus musculus chromosome 5, clone RP23-60J23, comp... 42 5.4
34gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, com... 42 5.4
35gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, co... 42 5.4
36gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosom... 42 5.4
37gb|DQ149914.1| Uncultured bacterium clone ARDNA17 16S ribosomal ... 42 5.4
38gb|AC102426.6| Mus musculus chromosome 1, clone RP24-88A10, comp... 42 5.4
39dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 42 5.4
40ref|XM_627117.1| Cryptosporidium parvum Iowa II hypothetical pro... 42 5.4
41dbj|AK156457.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 5.4
42gb|AC007155.16| Arabidopsis thaliana chromosome 2 clone T18E17 m... 42 5.4
43gb|AC067742.7| Homo sapiens chromosome 10 clone RP11-508P23, com... 42 5.4
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
45emb|AL139122.12| Human DNA sequence from clone RP11-360L4 on chr... 42 5.4
46gb|AC154339.2| Mus musculus BAC clone RP23-248O15 from chromosom... 42 5.4
47gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosom... 42 5.4
48gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosom... 42 5.4
49emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in li... 42 5.4
50gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, r... 42 5.4
51gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, r... 42 5.4
52gb|AC098800.3| Homo sapiens BAC clone RP11-666P13 from 2, comple... 42 5.4
53dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, ... 42 5.4
54gb|AC117451.3| Homo sapiens 3 BAC RP11-331K15 (Roswell Park Canc... 42 5.4
55dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
56dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic D... 42 5.4
57dbj|AB046434.1| Arabidopsis thaliana DNA, chromosome 5 centromer... 42 5.4
58gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18 42 5.4
59gb|AC000133.1|ENAC000133 Emericella nidulans cosmid SW06E08, com... 42 5.4
60gb|AC007004.3|AC007004 Homo sapiens clone NH0521D03, complete se... 42 5.4
61gb|AC004249.1|AC004249 Drosophila melanogaster (P1 DS00649 (D167... 42 5.4
62gb|AC161871.5| Mus musculus BAC clone RP24-84N15 from chromosome... 42 5.4
63gb|AC168072.3| Mus musculus BAC clone CH25-291I13 from chromosom... 42 5.4

>ref|NM_001066198.1| Oryza sativa (japonica cultivar-group) Os07g0486500 (Os07g0486500)
            mRNA, complete cds
          Length = 1824
 Score =  545 bits (275), Expect = e-151
 Identities = 490/564 (86%)
 Strand = Plus / Plus

                                                                        
Query: 106  gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165
            ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 483  gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 542

                                                                        
Query: 166  tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 225
             || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 543  cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 602

                                                                        
Query: 226  gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 285
             ||||||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | 
Sbjct: 603  caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 662

                                                                        
Query: 286  gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 345
            ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||
Sbjct: 663  gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 722

                                                                        
Query: 346  gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 405
            | |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 723  gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 782

                                                                        
Query: 406  tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 465
            ||||||||||||        |||| || |||||||| |||||||||||||| ||||||||
Sbjct: 783  tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 842

                                                                        
Query: 466  ctggcagaagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcaca 525
            ||||||||||||||| ||||||| ||| || |||||||||||  |||||||||| | |||
Sbjct: 843  ctggcagaagggagtcgccagcactgatgtctttggtgttcccattgaagccaccgtaca 902

                                                                        
Query: 526  acgggagcaatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggt 585
            ||| ||||||||||||||||||||||||||| |||| ||||| ||||||||  |  ||||
Sbjct: 903  acgagagcaatctggtaaagctgtgcctctggtacttgtgagatgtgcagattatctggt 962

                                                                        
Query: 586  tatatcaggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttca 645
            ||||||||| |||||||||||||||||||||||||| || || || | ||||||||||||
Sbjct: 963  tatatcaggtttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttca 1022

                                    
Query: 646  gcaactagtttcactttacaatga 669
            |||| |||| || |||||||||||
Sbjct: 1023 gcaattagtctctctttacaatga 1046



 Score =  387 bits (195), Expect = e-104
 Identities = 427/501 (85%), Gaps = 5/501 (0%)
 Strand = Plus / Plus

                                                                        
Query: 670  ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729
            |||||||||||| |||||||| ||||| |||||||| || || ||||| || ||  ||||
Sbjct: 1092 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 1151

                                                                        
Query: 730  ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788
            ||||||||| |||| |||||| |||||||||||||  ||| |||||||  ||||||||||
Sbjct: 1152 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 1210

                                                                        
Query: 789  agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848
            ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| |||||||
Sbjct: 1211 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 1270

                                                                        
Query: 849  gccgtaaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctt 908
            ||||||||||| | || ||||||||||||||||||| |||||| ||||| || || ||||
Sbjct: 1271 gccgtaaatcatcgcttaacaagatggactctcgtagccttgcagtggaatttgcgcctt 1330

                                                                        
Query: 909  tgatcatatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacac 968
            ||||||| ||||| ||||| || |||||||||||||||||||||||||| ||||| || |
Sbjct: 1331 tgatcatgtggcagcaaggtgactctggaacagatttgcggaatcatcttagatttaccc 1390

                                                                        
Query: 969  tgaaaccacctccaaaaatcgtggacacaa---caagtaccattacatgggacttgttag 1025
            | ||| ||||||||||||| ||||| ||||   ||| |||||    ||||||  ||||||
Sbjct: 1391 taaaagcacctccaaaaattgtggatacaacatcaaataccacagaatgggatctgttag 1450

                                                                        
Query: 1026 atgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagact 1085
            ||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| |
Sbjct: 1451 atgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccagatt 1510

                                                                        
Query: 1086 acggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatg 1145
            || |  | |||||||| ||||| |   | ||||||||||||||| |||| ||||| ||||
Sbjct: 1511 acagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactgatg 1570

                                 
Query: 1146 caaacgagactgtatggagat 1166
            | |||||||| ||||||||||
Sbjct: 1571 cgaacgagaccgtatggagat 1591



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240
            ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 1622 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 1660



to top

>dbj|AK068175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130L24, full
           insert sequence
          Length = 1774

 Score =  545 bits (275), Expect = e-151
 Identities = 490/564 (86%)
 Strand = Plus / Plus

                                                                       
Query: 106 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165
           ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 248 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 307

                                                                       
Query: 166 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 225
            || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 308 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 367

                                                                       
Query: 226 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 285
            ||||||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | 
Sbjct: 368 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 427

                                                                       
Query: 286 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 345
           ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||
Sbjct: 428 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 487

                                                                       
Query: 346 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 405
           | |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 488 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 547

                                                                       
Query: 406 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 465
           ||||||||||||        |||| || |||||||| |||||||||||||| ||||||||
Sbjct: 548 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 607

                                                                       
Query: 466 ctggcagaagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcaca 525
           ||||||||||||||| ||||||| ||| || |||||||||||  |||||||||| | |||
Sbjct: 608 ctggcagaagggagtcgccagcactgatgtctttggtgttcccattgaagccaccgtaca 667

                                                                       
Query: 526 acgggagcaatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggt 585
           ||| ||||||||||||||||||||||||||| |||| ||||| ||||||||  |  ||||
Sbjct: 668 acgagagcaatctggtaaagctgtgcctctggtacttgtgagatgtgcagattatctggt 727

                                                                       
Query: 586 tatatcaggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttca 645
           ||||||||| |||||||||||||||||||||||||| || || || | ||||||||||||
Sbjct: 728 tatatcaggtttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttca 787

                                   
Query: 646 gcaactagtttcactttacaatga 669
           |||| |||| || |||||||||||
Sbjct: 788 gcaattagtctctctttacaatga 811



 Score =  387 bits (195), Expect = e-104
 Identities = 427/501 (85%), Gaps = 5/501 (0%)
 Strand = Plus / Plus

                                                                        
Query: 670  ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729
            |||||||||||| |||||||| ||||| |||||||| || || ||||| || ||  ||||
Sbjct: 857  ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 916

                                                                        
Query: 730  ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788
            ||||||||| |||| |||||| |||||||||||||  ||| |||||||  ||||||||||
Sbjct: 917  ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 975

                                                                        
Query: 789  agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848
            ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| |||||||
Sbjct: 976  agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 1035

                                                                        
Query: 849  gccgtaaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctt 908
            ||||||||||| | || ||||||||||||||||||| |||||| ||||| || || ||||
Sbjct: 1036 gccgtaaatcatcgcttaacaagatggactctcgtagccttgcagtggaatttgcgcctt 1095

                                                                        
Query: 909  tgatcatatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacac 968
            ||||||| ||||| ||||| || |||||||||||||||||||||||||| ||||| || |
Sbjct: 1096 tgatcatgtggcagcaaggtgactctggaacagatttgcggaatcatcttagatttaccc 1155

                                                                        
Query: 969  tgaaaccacctccaaaaatcgtggacacaa---caagtaccattacatgggacttgttag 1025
            | ||| ||||||||||||| ||||| ||||   ||| |||||    ||||||  ||||||
Sbjct: 1156 taaaagcacctccaaaaattgtggatacaacatcaaataccacagaatgggatctgttag 1215

                                                                        
Query: 1026 atgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagact 1085
            ||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| |
Sbjct: 1216 atgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccagatt 1275

                                                                        
Query: 1086 acggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatg 1145
            || |  | |||||||| ||||| |   | ||||||||||||||| |||| ||||| ||||
Sbjct: 1276 acagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactgatg 1335

                                 
Query: 1146 caaacgagactgtatggagat 1166
            | |||||||| ||||||||||
Sbjct: 1336 cgaacgagaccgtatggagat 1356



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240
            ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 1387 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 1425



to top

>dbj|AK063998.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F03, full
            insert sequence
          Length = 1824

 Score =  545 bits (275), Expect = e-151
 Identities = 490/564 (86%)
 Strand = Plus / Plus

                                                                        
Query: 106  gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165
            ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 483  gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 542

                                                                        
Query: 166  tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 225
             || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 543  cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 602

                                                                        
Query: 226  gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 285
             ||||||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | 
Sbjct: 603  caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 662

                                                                        
Query: 286  gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 345
            ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||
Sbjct: 663  gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 722

                                                                        
Query: 346  gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 405
            | |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 723  gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 782

                                                                        
Query: 406  tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 465
            ||||||||||||        |||| || |||||||| |||||||||||||| ||||||||
Sbjct: 783  tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 842

                                                                        
Query: 466  ctggcagaagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcaca 525
            ||||||||||||||| ||||||| ||| || |||||||||||  |||||||||| | |||
Sbjct: 843  ctggcagaagggagtcgccagcactgatgtctttggtgttcccattgaagccaccgtaca 902

                                                                        
Query: 526  acgggagcaatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggt 585
            ||| ||||||||||||||||||||||||||| |||| ||||| ||||||||  |  ||||
Sbjct: 903  acgagagcaatctggtaaagctgtgcctctggtacttgtgagatgtgcagattatctggt 962

                                                                        
Query: 586  tatatcaggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttca 645
            ||||||||| |||||||||||||||||||||||||| || || || | ||||||||||||
Sbjct: 963  tatatcaggtttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttca 1022

                                    
Query: 646  gcaactagtttcactttacaatga 669
            |||| |||| || |||||||||||
Sbjct: 1023 gcaattagtctctctttacaatga 1046



 Score =  387 bits (195), Expect = e-104
 Identities = 427/501 (85%), Gaps = 5/501 (0%)
 Strand = Plus / Plus

                                                                        
Query: 670  ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729
            |||||||||||| |||||||| ||||| |||||||| || || ||||| || ||  ||||
Sbjct: 1092 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 1151

                                                                        
Query: 730  ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788
            ||||||||| |||| |||||| |||||||||||||  ||| |||||||  ||||||||||
Sbjct: 1152 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 1210

                                                                        
Query: 789  agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848
            ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| |||||||
Sbjct: 1211 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 1270

                                                                        
Query: 849  gccgtaaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctt 908
            ||||||||||| | || ||||||||||||||||||| |||||| ||||| || || ||||
Sbjct: 1271 gccgtaaatcatcgcttaacaagatggactctcgtagccttgcagtggaatttgcgcctt 1330

                                                                        
Query: 909  tgatcatatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacac 968
            ||||||| ||||| ||||| || |||||||||||||||||||||||||| ||||| || |
Sbjct: 1331 tgatcatgtggcagcaaggtgactctggaacagatttgcggaatcatcttagatttaccc 1390

                                                                        
Query: 969  tgaaaccacctccaaaaatcgtggacacaa---caagtaccattacatgggacttgttag 1025
            | ||| ||||||||||||| ||||| ||||   ||| |||||    ||||||  ||||||
Sbjct: 1391 taaaagcacctccaaaaattgtggatacaacatcaaataccacagaatgggatctgttag 1450

                                                                        
Query: 1026 atgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagact 1085
            ||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| |
Sbjct: 1451 atgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccagatt 1510

                                                                        
Query: 1086 acggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatg 1145
            || |  | |||||||| ||||| |   | ||||||||||||||| |||| ||||| ||||
Sbjct: 1511 acagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactgatg 1570

                                 
Query: 1146 caaacgagactgtatggagat 1166
            | |||||||| ||||||||||
Sbjct: 1571 cgaacgagaccgtatggagat 1591



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240
            ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 1622 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 1660



to top

>gb|AY105276.1| Zea mays PCO109481 mRNA sequence
          Length = 1512

 Score =  311 bits (157), Expect = 4e-81
 Identities = 414/499 (82%), Gaps = 3/499 (0%)
 Strand = Plus / Plus

                                                                        
Query: 673  tgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctcttta 732
            ||||||| | ||||||||||||||||| ||||| || |||||||| || ||| | |||||
Sbjct: 771  tgcactggtgaagtgctaccttgccagtatccctgagccgcttactacattttcgcttta 830

                                                                        
Query: 733  tgatgagcttaaagatgcgagggttagcattgatgatcttaagaacatactgaagaagct 792
            ||||||||||  || ||||||||||||||||  |||||||| | | ||| ||||||||||
Sbjct: 831  tgatgagcttcgagctgcgagggttagcattcctgatcttagggatatattgaagaagct 890

                                                                        
Query: 793  tccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaagccg 852
            |||||||||||||||||||||| |||| ||||||||| ||||||| ||  |||| |||| 
Sbjct: 891  tccaaatgtgaactacatgacaatagagtttgttacagcattgcttcttcgagtcagcca 950

                                                                        
Query: 853  taaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctttgat 912
            ||||||| |||| |||||||||||||| || | |||||||||||| || || ||||||||
Sbjct: 951  taaatcatcacttaacaagatggactcccgcagccttgctgtggaatttgcgcctttgat 1010

                                                                        
Query: 913  catatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacactgaa 972
            ||| ||||  ||||| ||  |||| ||||||||||| || || ||||  || || |||||
Sbjct: 1011 catgtggcggcaaggtgacactggcacagatttgcgtaaccacctcaagtttaccctgaa 1070

                                                                        
Query: 973  accacctccaaaaatcgtggacacaac---aagtaccattacatgggacttgttagatga 1029
            ||| ||||||||||| ||||| |||||   || | |    ||||||||| ||||||||||
Sbjct: 1071 accgcctccaaaaattgtggatacaacatcaaatgctgccacatgggacctgttagatga 1130

                                                                        
Query: 1030 ggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagactacgg 1089
            |||||| | ||||||||| || || |||||||| || |||||||| || ||||||||| |
Sbjct: 1131 ggatgacgaggatgcttcatcccagatccccttagacgatgcttcaccaccagactacag 1190

                                                                        
Query: 1090 tgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatgcaaa 1149
              |||||||||| ||||||||  |||| |||||||||||| |||| ||||| || |||||
Sbjct: 1191 ctccattgaggttatccagtgtctgatcgagcatcacaatgccatcttcaccgacgcaaa 1250

                               
Query: 1150 cgagactgtatggagatga 1168
             || || || |||||||||
Sbjct: 1251 tgaaaccgtgtggagatga 1269



 Score =  301 bits (152), Expect = 4e-78
 Identities = 274/317 (86%)
 Strand = Plus / Plus

                                                                       
Query: 353 aggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagag 412
           ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 406 aggaaaggcatttcagagacaaaggagaaggttgcagtgggaaaggtcaaagttgaagag 465

                                                                       
Query: 413 gctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacgctggcag 472
           |||||        |||| ||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 466 gctgctaaaaaaactgcagataaaagcaagagtatcttgaacaatattgaacgctggcag 525

                                                                       
Query: 473 aagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcacaacgggag 532
           |||||||| || |||| ||| || |||||||||||| ||||||| |||| |||||| |||
Sbjct: 526 aagggagtcgcaagcactgatgtgtttggtgttcctattgaagctactgtacaacgagag 585

                                                                       
Query: 533 caatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggttatatca 592
           ||||||| || ||| ||||| ||| | || ||||| ||||| ||| || |||||||||||
Sbjct: 586 caatctgatagagcggtgcccctggtgcttgtgagatgtgcggactacctggttatatca 645

                                                                       
Query: 593 ggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttcagcaacta 652
           || |||| |||||||||||| |||||||||||||| |||| |||||||||||||||  ||
Sbjct: 646 ggtttgaataatgagtacttattcaaatctgaaggtgacaaaaaagttcttcagcagtta 705

                            
Query: 653 gtttcactttacaatga 669
           ||||| |||||||||||
Sbjct: 706 gtttctctttacaatga 722



 Score =  157 bits (79), Expect = 1e-34
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                       
Query: 131 tggcgccggaaggcgaccgatttcttctcttcatctagtttcaagctgaagcaggcaggg 190
           |||||||| || || || |||||||||||  |||||||| ||||||||||||||||||||
Sbjct: 175 tggcgccgcaaagccacggatttcttctccacatctagtgtcaagctgaagcaggcaggg 234

                                                                       
Query: 191 caatctgcaggggataatatagctgatgttgctgggaaggttggaacagtggtgaagagt 250
           ||||| || |||||||||||||||||||||||||||||||||||  | | ||||||||||
Sbjct: 235 caatcggccggggataatatagctgatgttgctgggaaggttgggtccgcggtgaagagt 294

                                          
Query: 251 cggtgggctatcttccaggatgctagacagc 281
           |||||||   |||||||||| ||||| ||||
Sbjct: 295 cggtgggtcgtcttccaggaggctaggcagc 325



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  262 bits (132), Expect = 3e-66
 Identities = 216/244 (88%)
 Strand = Plus / Plus

                                                                            
Query: 170      ttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgggaag 229
                |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 17855364 ttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctggcaag 17855423

                                                                            
Query: 230      gttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgaccgcca 289
                |||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | ||| 
Sbjct: 17855424 gttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggcagccg 17855483

                                                                            
Query: 290      ctacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagtgatt 349
                | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||| ||
Sbjct: 17855484 ccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggtgctt 17855543

                                                                            
Query: 350      ctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaa 409
                |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 17855544 ctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagttgaa 17855603

                    
Query: 410      gagg 413
                ||||
Sbjct: 17855604 gagg 17855607



 Score =  180 bits (91), Expect = 9e-42
 Identities = 168/191 (87%), Gaps = 2/191 (1%)
 Strand = Plus / Plus

                                                                            
Query: 670      ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729
                |||||||||||| |||||||| ||||| |||||||| || || ||||| || ||  ||||
Sbjct: 17856934 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 17856993

                                                                            
Query: 730      ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788
                ||||||||| |||| |||||| |||||||||||||  ||| |||||||  ||||||||||
Sbjct: 17856994 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 17857052

                                                                            
Query: 789      agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848
                ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| |||||||
Sbjct: 17857053 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 17857112

                           
Query: 849      gccgtaaatca 859
                |||||||||||
Sbjct: 17857113 gccgtaaatca 17857123



 Score =  133 bits (67), Expect = 2e-27
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                            
Query: 870      agatggactctcgtacccttgctgtggagttcgcacctttgatcatatggcaacaagggg 929
                ||||||||||||||| |||||| ||||| || || ||||||||||| ||||| ||||| |
Sbjct: 17857794 agatggactctcgtagccttgcagtggaatttgcgcctttgatcatgtggcagcaaggtg 17857853

                                                                            
Query: 930      attctggaacagatttgcggaatcatctcagattcacactgaaaccacctccaaaaatcg 989
                | |||||||||||||||||||||||||| ||||| || || ||| ||||||||||||| |
Sbjct: 17857854 actctggaacagatttgcggaatcatcttagatttaccctaaaagcacctccaaaaattg 17857913

                           
Query: 990      tggacacaaca 1000
                |||| ||||||
Sbjct: 17857914 tggatacaaca 17857924



 Score =  109 bits (55), Expect = 3e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1024     agatgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccaga 1083
                ||||||||||||||||||||| || || ||||||||||||||||| || ||||| |||||
Sbjct: 17858159 agatgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccaga 17858218

                                                                            
Query: 1084     ctacggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacgga 1143
                 ||| |  | |||||||| ||||| |   | ||||||||||||||| |||| ||||| ||
Sbjct: 17858219 ttacagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactga 17858278

                                       
Query: 1144     tgcaaacgagactgtatggagat 1166
                ||| |||||||| ||||||||||
Sbjct: 17858279 tgcgaacgagaccgtatggagat 17858301



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                            
Query: 497      tttggtgttcctgttgaagccactgcacaacgggagcaatctggtaaagctgtgcctctg 556
                |||||||||||  |||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 17856549 tttggtgttcccattgaagccaccgtacaacgagagcaatctggtaaagctgtgcctctg 17856608

                                                      
Query: 557      atactcgtgaggtgtgcagaccacttggttatatcagg 594
                 |||| ||||| ||||||||  |  |||||||||||||
Sbjct: 17856609 gtacttgtgagatgtgcagattatctggttatatcagg 17856646



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 596      ttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttcagcaactagtt 655
                |||||||||||||||||||||||||| || || || | |||||||||||||||| |||| 
Sbjct: 17856727 ttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttcagcaattagtc 17856786

                              
Query: 656      tcactttacaatga 669
                || |||||||||||
Sbjct: 17856787 tctctttacaatga 17856800



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                           
Query: 434      aaaagcaaaactattttgaacaatattgaacgctggcagaagg 476
                |||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 17856148 aaaagcaagactattttgaacaacattgaacgctggcagaagg 17856190



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 106      gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165
                ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 17854786 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 17854845



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 1202     ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240
                ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 17858332 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 17858370



to top

>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0683C09
          Length = 185139

 Score =  262 bits (132), Expect = 3e-66
 Identities = 216/244 (88%)
 Strand = Plus / Plus

                                                                         
Query: 170   ttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgggaag 229
             |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 82356 ttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctggcaag 82415

                                                                         
Query: 230   gttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgaccgcca 289
             |||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | ||| 
Sbjct: 82416 gttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggcagccg 82475

                                                                         
Query: 290   ctacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagtgatt 349
             | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||| ||
Sbjct: 82476 ccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggtgctt 82535

                                                                         
Query: 350   ctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaa 409
             |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 82536 ctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagttgaa 82595

                 
Query: 410   gagg 413
             ||||
Sbjct: 82596 gagg 82599



 Score =  180 bits (91), Expect = 9e-42
 Identities = 168/191 (87%), Gaps = 2/191 (1%)
 Strand = Plus / Plus

                                                                         
Query: 670   ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729
             |||||||||||| |||||||| ||||| |||||||| || || ||||| || ||  ||||
Sbjct: 83926 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 83985

                                                                         
Query: 730   ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788
             ||||||||| |||| |||||| |||||||||||||  ||| |||||||  ||||||||||
Sbjct: 83986 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 84044

                                                                         
Query: 789   agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848
             ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| |||||||
Sbjct: 84045 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 84104

                        
Query: 849   gccgtaaatca 859
             |||||||||||
Sbjct: 84105 gccgtaaatca 84115



 Score =  133 bits (67), Expect = 2e-27
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                         
Query: 870   agatggactctcgtacccttgctgtggagttcgcacctttgatcatatggcaacaagggg 929
             ||||||||||||||| |||||| ||||| || || ||||||||||| ||||| ||||| |
Sbjct: 84786 agatggactctcgtagccttgcagtggaatttgcgcctttgatcatgtggcagcaaggtg 84845

                                                                         
Query: 930   attctggaacagatttgcggaatcatctcagattcacactgaaaccacctccaaaaatcg 989
             | |||||||||||||||||||||||||| ||||| || || ||| ||||||||||||| |
Sbjct: 84846 actctggaacagatttgcggaatcatcttagatttaccctaaaagcacctccaaaaattg 84905

                        
Query: 990   tggacacaaca 1000
             |||| ||||||
Sbjct: 84906 tggatacaaca 84916



 Score =  109 bits (55), Expect = 3e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1024  agatgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccaga 1083
             ||||||||||||||||||||| || || ||||||||||||||||| || ||||| |||||
Sbjct: 85151 agatgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccaga 85210

                                                                         
Query: 1084  ctacggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacgga 1143
              ||| |  | |||||||| ||||| |   | ||||||||||||||| |||| ||||| ||
Sbjct: 85211 ttacagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactga 85270

                                    
Query: 1144  tgcaaacgagactgtatggagat 1166
             ||| |||||||| ||||||||||
Sbjct: 85271 tgcgaacgagaccgtatggagat 85293



 Score = 99.6 bits (50), Expect = 3e-17
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                         
Query: 497   tttggtgttcctgttgaagccactgcacaacgggagcaatctggtaaagctgtgcctctg 556
             |||||||||||  |||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 83541 tttggtgttcccattgaagccaccgtacaacgagagcaatctggtaaagctgtgcctctg 83600

                                                   
Query: 557   atactcgtgaggtgtgcagaccacttggttatatcagg 594
              |||| ||||| ||||||||  |  |||||||||||||
Sbjct: 83601 gtacttgtgagatgtgcagattatctggttatatcagg 83638



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 596   ttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttcagcaactagtt 655
             |||||||||||||||||||||||||| || || || | |||||||||||||||| |||| 
Sbjct: 83719 ttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttcagcaattagtc 83778

                           
Query: 656   tcactttacaatga 669
             || |||||||||||
Sbjct: 83779 tctctttacaatga 83792



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 434   aaaagcaaaactattttgaacaatattgaacgctggcagaagg 476
             |||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 83140 aaaagcaagactattttgaacaacattgaacgctggcagaagg 83182



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 106   gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165
             ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 81778 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 81837



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 1202  ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240
             ||||||||||| ||||||||||||||||| | |||||||
Sbjct: 85324 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 85362



to top

>gb|AC146615.2| Mus musculus BAC clone RP23-19K2 from chromosome 14, complete sequence
          Length = 192561

 Score = 50.1 bits (25), Expect = 0.022
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 1270   tccaaacttctttttctttttgtgg 1294
              |||||||||||||||||||||||||
Sbjct: 157603 tccaaacttctttttctttttgtgg 157627



to top

>gb|AC122391.4| Mus musculus BAC clone RP24-81C18 from 14, complete sequence
          Length = 184636

 Score = 50.1 bits (25), Expect = 0.022
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 1270   tccaaacttctttttctttttgtgg 1294
              |||||||||||||||||||||||||
Sbjct: 164103 tccaaacttctttttctttttgtgg 164079



to top

>ref|NM_203244.1| Arabidopsis thaliana Rho GTPase activator (AT5G61530) mRNA,
           complete cds
          Length = 1480

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 483 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 529



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163
            |||||||| | ||||| || |||||| | || ||||| ||||||  ||||||||||||||
Sbjct: 1243 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1302

             
Query: 1164 g 1164
            |
Sbjct: 1303 g 1303



to top

>ref|NM_125546.1| Arabidopsis thaliana Rho GTPase activator (AT5G61530) mRNA,
           complete cds
          Length = 1536

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 516 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 562



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163
            |||||||| | ||||| || |||||| | || ||||| ||||||  ||||||||||||||
Sbjct: 1303 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1362

             
Query: 1164 g 1164
            |
Sbjct: 1363 g 1363



to top

>gb|AY133882.1| Arabidopsis thaliana clone U10143 unknown protein (At5g61530) mRNA,
           complete cds
          Length = 1162

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 280 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 326



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163
            |||||||| | ||||| || |||||| | || ||||| ||||||  ||||||||||||||
Sbjct: 1067 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1126

             
Query: 1164 g 1164
            |
Sbjct: 1127 g 1127



to top

>gb|AY045924.1| Arabidopsis thaliana unknown protein (At5g61530) mRNA, complete cds
          Length = 1517

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 483 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 529



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163
            |||||||| | ||||| || |||||| | || ||||| ||||||  ||||||||||||||
Sbjct: 1270 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1329

             
Query: 1164 g 1164
            |
Sbjct: 1330 g 1330



to top

>gb|AY085460.1| Arabidopsis thaliana clone 152557 mRNA, complete sequence
          Length = 1536

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 516 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 562



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163
            |||||||| | ||||| || |||||| | || ||||| ||||||  ||||||||||||||
Sbjct: 1303 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1362

             
Query: 1164 g 1164
            |
Sbjct: 1363 g 1363



to top

>emb|BX831842.1|CNS0A1ZG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH33ZA07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1480

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 502 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 548



to top

>emb|BX831138.1|CNS0A1RB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS60ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1476

 Score = 46.1 bits (23), Expect = 0.35
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 481 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 527



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163
            |||||||| | ||||| || |||||| | || ||||| ||||||  ||||||||||||||
Sbjct: 1243 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1302

             
Query: 1164 g 1164
            |
Sbjct: 1303 g 1303



to top

>gb|AC166602.2| Eulemur macaco macaco clone CH273-138L3, complete sequence
          Length = 172515

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1277   ttctttttctttttgtgggagt 1298
              ||||||||||||||||||||||
Sbjct: 147612 ttctttttctttttgtgggagt 147633



to top

>emb|CR925808.19| Zebrafish DNA sequence from clone DKEY-200L5 in linkage group 10,
             complete sequence
          Length = 170902

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1271  ccaaacttctttttctttttgt 1292
             ||||||||||||||||||||||
Sbjct: 11663 ccaaacttctttttctttttgt 11684



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 438      gcaaaactattttgaacaatat 459
                ||||||||||||||||||||||
Sbjct: 27083800 gcaaaactattttgaacaatat 27083779



to top

>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete
             sequence
          Length = 111882

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 438   gcaaaactattttgaacaatat 459
             ||||||||||||||||||||||
Sbjct: 66922 gcaaaactattttgaacaatat 66943



to top

>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9
          Length = 69142

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 368   gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagagg 413
             ||||||||||| |||||  | ||||||||| ||||||| |||||||
Sbjct: 17569 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagagg 17614



 Score = 42.1 bits (21), Expect = 5.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                         
Query: 1104  tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163
             |||||||| | ||||| || |||||| | || ||||| ||||||  ||||||||||||||
Sbjct: 19097 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 19156

              
Query: 1164  g 1164
             |
Sbjct: 19157 g 19157



to top

>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b,
             complete sequence
          Length = 43428

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 776   aacatactgaagaagcttccaaatgtgaactacatgac 813
             ||||||||||||| |||| ||| ||| |||||||||||
Sbjct: 41297 aacatactgaagaggctttcaagtgttaactacatgac 41334



to top

>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete
             sequence
          Length = 235868

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1272  caaacttctttttctttttgtg 1293
             ||||||||||||||||||||||
Sbjct: 81047 caaacttctttttctttttgtg 81068



to top

>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete sequence
          Length = 194274

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1274   aacttctttttctttttgtggg 1295
              ||||||||||||||||||||||
Sbjct: 124677 aacttctttttctttttgtggg 124698



to top

>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence
          Length = 203314

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1274   aacttctttttctttttgtggg 1295
              ||||||||||||||||||||||
Sbjct: 134021 aacttctttttctttttgtggg 134000



to top

>emb|CU137657.2| Medicago truncatula chromosome 5 clone mte1-29c13, COMPLETE SEQUENCE
          Length = 145484

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1272  caaacttctttttctttttgt 1292
             |||||||||||||||||||||
Sbjct: 38178 caaacttctttttctttttgt 38158



to top

>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence
          Length = 21146708

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1276     cttctttttctttttgtggga 1296
                |||||||||||||||||||||
Sbjct: 12270929 cttctttttctttttgtggga 12270909



to top

>ref|NM_001029878.1| Mus musculus LON peptidase N-terminal domain and ring finger 2
            (Lonrf2), mRNA
          Length = 5077

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 1277 ttctttttctttttgtgggagtaaaagtaggaa 1309
            ||||||||||||||| ||| | |||||||||||
Sbjct: 2895 ttctttttctttttgggggggaaaaagtaggaa 2927



to top

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1270    tccaaacttctttttcttttt 1290
               |||||||||||||||||||||
Sbjct: 5007459 tccaaacttctttttcttttt 5007479



to top

>gb|AC182734.3| Pan troglodytes BAC clone CH251-356H17 from chromosome 2, complete
              sequence
          Length = 209702

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1379   gaatacatttaatttagattt 1399
              |||||||||||||||||||||
Sbjct: 195856 gaatacatttaatttagattt 195836



to top

>gb|AC158548.10| Mus musculus chromosome 5, clone RP23-258F17, complete sequence
          Length = 227065

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 927    gggattctggaacagatttgc 947
              |||||||||||||||||||||
Sbjct: 197060 gggattctggaacagatttgc 197040



to top

>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence
          Length = 156547

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 458   attgaacgctggcagaaggga 478
             |||||||||||||||||||||
Sbjct: 36119 attgaacgctggcagaaggga 36139



to top

>ref|XM_653478.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0966.2), mRNA
          Length = 771

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 66  cgattcgatccgaacccatcc 86
           |||||||||||||||||||||
Sbjct: 478 cgattcgatccgaacccatcc 498



to top

>gb|AC120861.7| Mus musculus chromosome 5, clone RP23-60J23, complete sequence
          Length = 239102

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 927    gggattctggaacagatttgc 947
              |||||||||||||||||||||
Sbjct: 146156 gggattctggaacagatttgc 146176



to top

>gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, complete sequence
          Length = 174536

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 613   gttcaaatctgaaggcgacag 633
             |||||||||||||||||||||
Sbjct: 87056 gttcaaatctgaaggcgacag 87036



to top

>gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, complete sequence
          Length = 234142

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    agctgaagcaggcagggcaat 194
              |||||||||||||||||||||
Sbjct: 138088 agctgaagcaggcagggcaat 138108



to top

>gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosome 1, complete sequence
          Length = 177793

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 1277  ttctttttctttttgtgggagtaaaagtaggaa 1309
             ||||||||||||||| ||| | |||||||||||
Sbjct: 97203 ttctttttctttttgggggggaaaaagtaggaa 97171



to top

>gb|DQ149914.1| Uncultured bacterium clone ARDNA17 16S ribosomal RNA gene, partial
           sequence
          Length = 655

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 tcggtgggctatcttccagga 270
           |||||||||||||||||||||
Sbjct: 134 tcggtgggctatcttccagga 114



to top

>gb|AC102426.6| Mus musculus chromosome 1, clone RP24-88A10, complete sequence
          Length = 192016

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 458   attgaacgctggcagaaggga 478
             |||||||||||||||||||||
Sbjct: 37415 attgaacgctggcagaaggga 37395



to top

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1273    aaacttctttttctttttgtg 1293
               |||||||||||||||||||||
Sbjct: 1291849 aaacttctttttctttttgtg 1291829



to top

>ref|XM_627117.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_2140),
           partial mRNA
          Length = 312

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 818 gaatttgttacatcattgcta 838
           |||||||||||||||||||||
Sbjct: 139 gaatttgttacatcattgcta 159



to top

>dbj|AK156457.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830022J17 product:unclassifiable, full
           insert sequence
          Length = 1924

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 458 attgaacgctggcagaaggga 478
           |||||||||||||||||||||
Sbjct: 865 attgaacgctggcagaaggga 845



to top

>gb|AC007155.16| Arabidopsis thaliana chromosome 2 clone T18E17 map PR1, complete
             sequence
          Length = 96095

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 214   tgatgttgctgggaaggttgg 234
             |||||||||||||||||||||
Sbjct: 62323 tgatgttgctgggaaggttgg 62343



to top

>gb|AC067742.7| Homo sapiens chromosome 10 clone RP11-508P23, complete sequence
          Length = 119222

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 963    tcacactgaaaccacctccaa 983
              |||||||||||||||||||||
Sbjct: 112864 tcacactgaaaccacctccaa 112884



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 315     gcttcatctctgctgccgcta 335
               |||||||||||||||||||||
Sbjct: 8848909 gcttcatctctgctgccgcta 8848889



to top

>emb|AL139122.12| Human DNA sequence from clone RP11-360L4 on chromosome 10, complete
             sequence
          Length = 94759

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1270  tccaaacttctttttcttttt 1290
             |||||||||||||||||||||
Sbjct: 29816 tccaaacttctttttcttttt 29796



to top

>gb|AC154339.2| Mus musculus BAC clone RP23-248O15 from chromosome 13, complete
            sequence
          Length = 174982

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 440  aaaactattttgaacaatattgaac 464
            ||||||||||| |||||||||||||
Sbjct: 1754 aaaactattttcaacaatattgaac 1778



to top

>gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosome 3, complete sequence
          Length = 195603

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1380   aatacatttaatttagatttt 1400
              |||||||||||||||||||||
Sbjct: 118662 aatacatttaatttagatttt 118682



to top

>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete sequence
          Length = 180876

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 613    gttcaaatctgaaggcgacag 633
              |||||||||||||||||||||
Sbjct: 155765 gttcaaatctgaaggcgacag 155785



to top

>emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in linkage group 19 Contains
              part of a novel gene similar to CSMD (CUB and sushi
              multiple domains protein), complete sequence
          Length = 161104

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 596    ttgagtaatgagtacttgttcaaat 620
              |||||||||||||| ||||||||||
Sbjct: 142711 ttgagtaatgagtaattgttcaaat 142735



to top

>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone
              BACR25I17, complete sequence
          Length = 157835

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1276   cttctttttctttttgtggga 1296
              |||||||||||||||||||||
Sbjct: 144764 cttctttttctttttgtggga 144744



to top

>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone
              BACR17I17, complete sequence
          Length = 159640

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1276   cttctttttctttttgtggga 1296
              |||||||||||||||||||||
Sbjct: 121314 cttctttttctttttgtggga 121294



to top

>gb|AC098800.3| Homo sapiens BAC clone RP11-666P13 from 2, complete sequence
          Length = 142003

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1379  gaatacatttaatttagattt 1399
             |||||||||||||||||||||
Sbjct: 95118 gaatacatttaatttagattt 95098



to top

>dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, complete sequence
          Length = 149685

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    agctgaagcaggcagggcaat 194
              |||||||||||||||||||||
Sbjct: 132059 agctgaagcaggcagggcaat 132079



to top

>gb|AC117451.3| Homo sapiens 3 BAC RP11-331K15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181637

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 444    ctattttgaacaatattgaac 464
              |||||||||||||||||||||
Sbjct: 100597 ctattttgaacaatattgaac 100617



to top

>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1001_B06
          Length = 134810

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    gcttcatctctgctgccgcta 335
              |||||||||||||||||||||
Sbjct: 119230 gcttcatctctgctgccgcta 119210



to top

>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528B02
          Length = 144495

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   gcttcatctctgctgccgcta 335
             |||||||||||||||||||||
Sbjct: 14538 gcttcatctctgctgccgcta 14518



to top

>dbj|AB046434.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F28L21
          Length = 35187

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 214   tgatgttgctgggaaggttgg 234
             |||||||||||||||||||||
Sbjct: 28766 tgatgttgctgggaaggttgg 28786



to top

>gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18
          Length = 88126

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 214   tgatgttgctgggaaggttgg 234
             |||||||||||||||||||||
Sbjct: 83506 tgatgttgctgggaaggttgg 83526



to top

>gb|AC000133.1|ENAC000133 Emericella nidulans cosmid SW06E08, complete sequence
          Length = 38807

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    cgattcgatccgaacccatcc 86
             |||||||||||||||||||||
Sbjct: 26143 cgattcgatccgaacccatcc 26123



to top

>gb|AC007004.3|AC007004 Homo sapiens clone NH0521D03, complete sequence
          Length = 35960

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   agctgaagcaggcagggcaat 194
             |||||||||||||||||||||
Sbjct: 17580 agctgaagcaggcagggcaat 17560



to top

>gb|AC004249.1|AC004249 Drosophila melanogaster (P1 DS00649 (D167)) DNA sequence, complete
             sequence
          Length = 79660

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1276  cttctttttctttttgtggga 1296
             |||||||||||||||||||||
Sbjct: 57074 cttctttttctttttgtggga 57094



to top

>gb|AC161871.5| Mus musculus BAC clone RP24-84N15 from chromosome 14, complete sequence
          Length = 204723

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1381   atacatttaatttagattttc 1401
              |||||||||||||||||||||
Sbjct: 173553 atacatttaatttagattttc 173573



to top

>gb|AC168072.3| Mus musculus BAC clone CH25-291I13 from chromosome 13, complete
             sequence
          Length = 110522

 Score = 42.1 bits (21), Expect = 5.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 440   aaaactattttgaacaatattgaac 464
             ||||||||||| |||||||||||||
Sbjct: 79015 aaaactattttcaacaatattgaac 79039


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 257,117,129
Number of extensions: 14694814
Number of successful extensions: 407066
Number of sequences better than 10.0: 63
Number of HSP's gapped: 407051
Number of HSP's successfully gapped: 102
Length of query: 1419
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1396
Effective length of database: 18,503,978,556
Effective search space: 25831554064176
Effective search space used: 25831554064176
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top