| Clone Name | FLbaf34j17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066198.1| Oryza sativa (japonica cultivar-group) Os07g0486500 (Os07g0486500) mRNA, complete cds Length = 1824 Score = 545 bits (275), Expect = e-151 Identities = 490/564 (86%) Strand = Plus / Plus Query: 106 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165 ||||||||| | |||||||||||| ||||||| |||||| || |||||||||||||||| Sbjct: 483 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 542 Query: 166 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 225 || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 543 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 602 Query: 226 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 285 |||||||| ||||||| ||||||||||||||| |||||||||| ||||| ||| | | Sbjct: 603 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 662 Query: 286 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 345 ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| || Sbjct: 663 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 722 Query: 346 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 405 | |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 723 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 782 Query: 406 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 465 |||||||||||| |||| || |||||||| |||||||||||||| |||||||| Sbjct: 783 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 842 Query: 466 ctggcagaagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcaca 525 ||||||||||||||| ||||||| ||| || ||||||||||| |||||||||| | ||| Sbjct: 843 ctggcagaagggagtcgccagcactgatgtctttggtgttcccattgaagccaccgtaca 902 Query: 526 acgggagcaatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggt 585 ||| ||||||||||||||||||||||||||| |||| ||||| |||||||| | |||| Sbjct: 903 acgagagcaatctggtaaagctgtgcctctggtacttgtgagatgtgcagattatctggt 962 Query: 586 tatatcaggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttca 645 ||||||||| |||||||||||||||||||||||||| || || || | |||||||||||| Sbjct: 963 tatatcaggtttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttca 1022 Query: 646 gcaactagtttcactttacaatga 669 |||| |||| || ||||||||||| Sbjct: 1023 gcaattagtctctctttacaatga 1046 Score = 387 bits (195), Expect = e-104 Identities = 427/501 (85%), Gaps = 5/501 (0%) Strand = Plus / Plus Query: 670 ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729 |||||||||||| |||||||| ||||| |||||||| || || ||||| || || |||| Sbjct: 1092 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 1151 Query: 730 ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788 ||||||||| |||| |||||| ||||||||||||| ||| ||||||| |||||||||| Sbjct: 1152 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 1210 Query: 789 agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848 ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||||||| Sbjct: 1211 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 1270 Query: 849 gccgtaaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctt 908 ||||||||||| | || ||||||||||||||||||| |||||| ||||| || || |||| Sbjct: 1271 gccgtaaatcatcgcttaacaagatggactctcgtagccttgcagtggaatttgcgcctt 1330 Query: 909 tgatcatatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacac 968 ||||||| ||||| ||||| || |||||||||||||||||||||||||| ||||| || | Sbjct: 1331 tgatcatgtggcagcaaggtgactctggaacagatttgcggaatcatcttagatttaccc 1390 Query: 969 tgaaaccacctccaaaaatcgtggacacaa---caagtaccattacatgggacttgttag 1025 | ||| ||||||||||||| ||||| |||| ||| ||||| |||||| |||||| Sbjct: 1391 taaaagcacctccaaaaattgtggatacaacatcaaataccacagaatgggatctgttag 1450 Query: 1026 atgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagact 1085 ||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| | Sbjct: 1451 atgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccagatt 1510 Query: 1086 acggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatg 1145 || | | |||||||| ||||| | | ||||||||||||||| |||| ||||| |||| Sbjct: 1511 acagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactgatg 1570 Query: 1146 caaacgagactgtatggagat 1166 | |||||||| |||||||||| Sbjct: 1571 cgaacgagaccgtatggagat 1591 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240 ||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1622 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 1660
>dbj|AK068175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130L24, full insert sequence Length = 1774 Score = 545 bits (275), Expect = e-151 Identities = 490/564 (86%) Strand = Plus / Plus Query: 106 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165 ||||||||| | |||||||||||| ||||||| |||||| || |||||||||||||||| Sbjct: 248 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 307 Query: 166 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 225 || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 308 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 367 Query: 226 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 285 |||||||| ||||||| ||||||||||||||| |||||||||| ||||| ||| | | Sbjct: 368 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 427 Query: 286 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 345 ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| || Sbjct: 428 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 487 Query: 346 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 405 | |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 488 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 547 Query: 406 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 465 |||||||||||| |||| || |||||||| |||||||||||||| |||||||| Sbjct: 548 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 607 Query: 466 ctggcagaagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcaca 525 ||||||||||||||| ||||||| ||| || ||||||||||| |||||||||| | ||| Sbjct: 608 ctggcagaagggagtcgccagcactgatgtctttggtgttcccattgaagccaccgtaca 667 Query: 526 acgggagcaatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggt 585 ||| ||||||||||||||||||||||||||| |||| ||||| |||||||| | |||| Sbjct: 668 acgagagcaatctggtaaagctgtgcctctggtacttgtgagatgtgcagattatctggt 727 Query: 586 tatatcaggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttca 645 ||||||||| |||||||||||||||||||||||||| || || || | |||||||||||| Sbjct: 728 tatatcaggtttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttca 787 Query: 646 gcaactagtttcactttacaatga 669 |||| |||| || ||||||||||| Sbjct: 788 gcaattagtctctctttacaatga 811 Score = 387 bits (195), Expect = e-104 Identities = 427/501 (85%), Gaps = 5/501 (0%) Strand = Plus / Plus Query: 670 ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729 |||||||||||| |||||||| ||||| |||||||| || || ||||| || || |||| Sbjct: 857 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 916 Query: 730 ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788 ||||||||| |||| |||||| ||||||||||||| ||| ||||||| |||||||||| Sbjct: 917 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 975 Query: 789 agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848 ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||||||| Sbjct: 976 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 1035 Query: 849 gccgtaaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctt 908 ||||||||||| | || ||||||||||||||||||| |||||| ||||| || || |||| Sbjct: 1036 gccgtaaatcatcgcttaacaagatggactctcgtagccttgcagtggaatttgcgcctt 1095 Query: 909 tgatcatatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacac 968 ||||||| ||||| ||||| || |||||||||||||||||||||||||| ||||| || | Sbjct: 1096 tgatcatgtggcagcaaggtgactctggaacagatttgcggaatcatcttagatttaccc 1155 Query: 969 tgaaaccacctccaaaaatcgtggacacaa---caagtaccattacatgggacttgttag 1025 | ||| ||||||||||||| ||||| |||| ||| ||||| |||||| |||||| Sbjct: 1156 taaaagcacctccaaaaattgtggatacaacatcaaataccacagaatgggatctgttag 1215 Query: 1026 atgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagact 1085 ||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| | Sbjct: 1216 atgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccagatt 1275 Query: 1086 acggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatg 1145 || | | |||||||| ||||| | | ||||||||||||||| |||| ||||| |||| Sbjct: 1276 acagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactgatg 1335 Query: 1146 caaacgagactgtatggagat 1166 | |||||||| |||||||||| Sbjct: 1336 cgaacgagaccgtatggagat 1356 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240 ||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1387 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 1425
>dbj|AK063998.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F03, full insert sequence Length = 1824 Score = 545 bits (275), Expect = e-151 Identities = 490/564 (86%) Strand = Plus / Plus Query: 106 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165 ||||||||| | |||||||||||| ||||||| |||||| || |||||||||||||||| Sbjct: 483 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 542 Query: 166 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 225 || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 543 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 602 Query: 226 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 285 |||||||| ||||||| ||||||||||||||| |||||||||| ||||| ||| | | Sbjct: 603 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 662 Query: 286 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 345 ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| || Sbjct: 663 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 722 Query: 346 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 405 | |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 723 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 782 Query: 406 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 465 |||||||||||| |||| || |||||||| |||||||||||||| |||||||| Sbjct: 783 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 842 Query: 466 ctggcagaagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcaca 525 ||||||||||||||| ||||||| ||| || ||||||||||| |||||||||| | ||| Sbjct: 843 ctggcagaagggagtcgccagcactgatgtctttggtgttcccattgaagccaccgtaca 902 Query: 526 acgggagcaatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggt 585 ||| ||||||||||||||||||||||||||| |||| ||||| |||||||| | |||| Sbjct: 903 acgagagcaatctggtaaagctgtgcctctggtacttgtgagatgtgcagattatctggt 962 Query: 586 tatatcaggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttca 645 ||||||||| |||||||||||||||||||||||||| || || || | |||||||||||| Sbjct: 963 tatatcaggtttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttca 1022 Query: 646 gcaactagtttcactttacaatga 669 |||| |||| || ||||||||||| Sbjct: 1023 gcaattagtctctctttacaatga 1046 Score = 387 bits (195), Expect = e-104 Identities = 427/501 (85%), Gaps = 5/501 (0%) Strand = Plus / Plus Query: 670 ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729 |||||||||||| |||||||| ||||| |||||||| || || ||||| || || |||| Sbjct: 1092 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 1151 Query: 730 ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788 ||||||||| |||| |||||| ||||||||||||| ||| ||||||| |||||||||| Sbjct: 1152 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 1210 Query: 789 agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848 ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||||||| Sbjct: 1211 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 1270 Query: 849 gccgtaaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctt 908 ||||||||||| | || ||||||||||||||||||| |||||| ||||| || || |||| Sbjct: 1271 gccgtaaatcatcgcttaacaagatggactctcgtagccttgcagtggaatttgcgcctt 1330 Query: 909 tgatcatatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacac 968 ||||||| ||||| ||||| || |||||||||||||||||||||||||| ||||| || | Sbjct: 1331 tgatcatgtggcagcaaggtgactctggaacagatttgcggaatcatcttagatttaccc 1390 Query: 969 tgaaaccacctccaaaaatcgtggacacaa---caagtaccattacatgggacttgttag 1025 | ||| ||||||||||||| ||||| |||| ||| ||||| |||||| |||||| Sbjct: 1391 taaaagcacctccaaaaattgtggatacaacatcaaataccacagaatgggatctgttag 1450 Query: 1026 atgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagact 1085 ||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| | Sbjct: 1451 atgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccagatt 1510 Query: 1086 acggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatg 1145 || | | |||||||| ||||| | | ||||||||||||||| |||| ||||| |||| Sbjct: 1511 acagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactgatg 1570 Query: 1146 caaacgagactgtatggagat 1166 | |||||||| |||||||||| Sbjct: 1571 cgaacgagaccgtatggagat 1591 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240 ||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1622 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 1660
>gb|AY105276.1| Zea mays PCO109481 mRNA sequence Length = 1512 Score = 311 bits (157), Expect = 4e-81 Identities = 414/499 (82%), Gaps = 3/499 (0%) Strand = Plus / Plus Query: 673 tgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctcttta 732 ||||||| | ||||||||||||||||| ||||| || |||||||| || ||| | ||||| Sbjct: 771 tgcactggtgaagtgctaccttgccagtatccctgagccgcttactacattttcgcttta 830 Query: 733 tgatgagcttaaagatgcgagggttagcattgatgatcttaagaacatactgaagaagct 792 |||||||||| || |||||||||||||||| |||||||| | | ||| |||||||||| Sbjct: 831 tgatgagcttcgagctgcgagggttagcattcctgatcttagggatatattgaagaagct 890 Query: 793 tccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaagccg 852 |||||||||||||||||||||| |||| ||||||||| ||||||| || |||| |||| Sbjct: 891 tccaaatgtgaactacatgacaatagagtttgttacagcattgcttcttcgagtcagcca 950 Query: 853 taaatcagcactcaacaagatggactctcgtacccttgctgtggagttcgcacctttgat 912 ||||||| |||| |||||||||||||| || | |||||||||||| || || |||||||| Sbjct: 951 taaatcatcacttaacaagatggactcccgcagccttgctgtggaatttgcgcctttgat 1010 Query: 913 catatggcaacaaggggattctggaacagatttgcggaatcatctcagattcacactgaa 972 ||| |||| ||||| || |||| ||||||||||| || || |||| || || ||||| Sbjct: 1011 catgtggcggcaaggtgacactggcacagatttgcgtaaccacctcaagtttaccctgaa 1070 Query: 973 accacctccaaaaatcgtggacacaac---aagtaccattacatgggacttgttagatga 1029 ||| ||||||||||| ||||| ||||| || | | ||||||||| |||||||||| Sbjct: 1071 accgcctccaaaaattgtggatacaacatcaaatgctgccacatgggacctgttagatga 1130 Query: 1030 ggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccagactacgg 1089 |||||| | ||||||||| || || |||||||| || |||||||| || ||||||||| | Sbjct: 1131 ggatgacgaggatgcttcatcccagatccccttagacgatgcttcaccaccagactacag 1190 Query: 1090 tgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacggatgcaaa 1149 |||||||||| |||||||| |||| |||||||||||| |||| ||||| || ||||| Sbjct: 1191 ctccattgaggttatccagtgtctgatcgagcatcacaatgccatcttcaccgacgcaaa 1250 Query: 1150 cgagactgtatggagatga 1168 || || || ||||||||| Sbjct: 1251 tgaaaccgtgtggagatga 1269 Score = 301 bits (152), Expect = 4e-78 Identities = 274/317 (86%) Strand = Plus / Plus Query: 353 aggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagag 412 ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 406 aggaaaggcatttcagagacaaaggagaaggttgcagtgggaaaggtcaaagttgaagag 465 Query: 413 gctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacgctggcag 472 ||||| |||| ||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 466 gctgctaaaaaaactgcagataaaagcaagagtatcttgaacaatattgaacgctggcag 525 Query: 473 aagggagttgccagcagtgacgtttttggtgttcctgttgaagccactgcacaacgggag 532 |||||||| || |||| ||| || |||||||||||| ||||||| |||| |||||| ||| Sbjct: 526 aagggagtcgcaagcactgatgtgtttggtgttcctattgaagctactgtacaacgagag 585 Query: 533 caatctggtaaagctgtgcctctgatactcgtgaggtgtgcagaccacttggttatatca 592 ||||||| || ||| ||||| ||| | || ||||| ||||| ||| || ||||||||||| Sbjct: 586 caatctgatagagcggtgcccctggtgcttgtgagatgtgcggactacctggttatatca 645 Query: 593 ggcttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttcagcaacta 652 || |||| |||||||||||| |||||||||||||| |||| ||||||||||||||| || Sbjct: 646 ggtttgaataatgagtacttattcaaatctgaaggtgacaaaaaagttcttcagcagtta 705 Query: 653 gtttcactttacaatga 669 ||||| ||||||||||| Sbjct: 706 gtttctctttacaatga 722 Score = 157 bits (79), Expect = 1e-34 Identities = 133/151 (88%) Strand = Plus / Plus Query: 131 tggcgccggaaggcgaccgatttcttctcttcatctagtttcaagctgaagcaggcaggg 190 |||||||| || || || ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 175 tggcgccgcaaagccacggatttcttctccacatctagtgtcaagctgaagcaggcaggg 234 Query: 191 caatctgcaggggataatatagctgatgttgctgggaaggttggaacagtggtgaagagt 250 ||||| || ||||||||||||||||||||||||||||||||||| | | |||||||||| Sbjct: 235 caatcggccggggataatatagctgatgttgctgggaaggttgggtccgcggtgaagagt 294 Query: 251 cggtgggctatcttccaggatgctagacagc 281 ||||||| |||||||||| ||||| |||| Sbjct: 295 cggtgggtcgtcttccaggaggctaggcagc 325
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 262 bits (132), Expect = 3e-66 Identities = 216/244 (88%) Strand = Plus / Plus Query: 170 ttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgggaag 229 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 17855364 ttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctggcaag 17855423 Query: 230 gttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgaccgcca 289 ||||| ||||||| ||||||||||||||| |||||||||| ||||| ||| | | ||| Sbjct: 17855424 gttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggcagccg 17855483 Query: 290 ctacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagtgatt 349 | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||| || Sbjct: 17855484 ccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggtgctt 17855543 Query: 350 ctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaa 409 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 17855544 ctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagttgaa 17855603 Query: 410 gagg 413 |||| Sbjct: 17855604 gagg 17855607 Score = 180 bits (91), Expect = 9e-42 Identities = 168/191 (87%), Gaps = 2/191 (1%) Strand = Plus / Plus Query: 670 ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729 |||||||||||| |||||||| ||||| |||||||| || || ||||| || || |||| Sbjct: 17856934 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 17856993 Query: 730 ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788 ||||||||| |||| |||||| ||||||||||||| ||| ||||||| |||||||||| Sbjct: 17856994 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 17857052 Query: 789 agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848 ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||||||| Sbjct: 17857053 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 17857112 Query: 849 gccgtaaatca 859 ||||||||||| Sbjct: 17857113 gccgtaaatca 17857123 Score = 133 bits (67), Expect = 2e-27 Identities = 115/131 (87%) Strand = Plus / Plus Query: 870 agatggactctcgtacccttgctgtggagttcgcacctttgatcatatggcaacaagggg 929 ||||||||||||||| |||||| ||||| || || ||||||||||| ||||| ||||| | Sbjct: 17857794 agatggactctcgtagccttgcagtggaatttgcgcctttgatcatgtggcagcaaggtg 17857853 Query: 930 attctggaacagatttgcggaatcatctcagattcacactgaaaccacctccaaaaatcg 989 | |||||||||||||||||||||||||| ||||| || || ||| ||||||||||||| | Sbjct: 17857854 actctggaacagatttgcggaatcatcttagatttaccctaaaagcacctccaaaaattg 17857913 Query: 990 tggacacaaca 1000 |||| |||||| Sbjct: 17857914 tggatacaaca 17857924 Score = 109 bits (55), Expect = 3e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 1024 agatgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccaga 1083 ||||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 17858159 agatgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccaga 17858218 Query: 1084 ctacggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacgga 1143 ||| | | |||||||| ||||| | | ||||||||||||||| |||| ||||| || Sbjct: 17858219 ttacagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactga 17858278 Query: 1144 tgcaaacgagactgtatggagat 1166 ||| |||||||| |||||||||| Sbjct: 17858279 tgcgaacgagaccgtatggagat 17858301 Score = 99.6 bits (50), Expect = 3e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 497 tttggtgttcctgttgaagccactgcacaacgggagcaatctggtaaagctgtgcctctg 556 ||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 17856549 tttggtgttcccattgaagccaccgtacaacgagagcaatctggtaaagctgtgcctctg 17856608 Query: 557 atactcgtgaggtgtgcagaccacttggttatatcagg 594 |||| ||||| |||||||| | ||||||||||||| Sbjct: 17856609 gtacttgtgagatgtgcagattatctggttatatcagg 17856646 Score = 83.8 bits (42), Expect = 2e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 596 ttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttcagcaactagtt 655 |||||||||||||||||||||||||| || || || | |||||||||||||||| |||| Sbjct: 17856727 ttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttcagcaattagtc 17856786 Query: 656 tcactttacaatga 669 || ||||||||||| Sbjct: 17856787 tctctttacaatga 17856800 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 434 aaaagcaaaactattttgaacaatattgaacgctggcagaagg 476 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 17856148 aaaagcaagactattttgaacaacattgaacgctggcagaagg 17856190 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 106 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165 ||||||||| | |||||||||||| ||||||| |||||| || |||||||||||||||| Sbjct: 17854786 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 17854845 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240 ||||||||||| ||||||||||||||||| | ||||||| Sbjct: 17858332 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 17858370
>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0683C09 Length = 185139 Score = 262 bits (132), Expect = 3e-66 Identities = 216/244 (88%) Strand = Plus / Plus Query: 170 ttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgggaag 229 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 82356 ttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctggcaag 82415 Query: 230 gttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgaccgcca 289 ||||| ||||||| ||||||||||||||| |||||||||| ||||| ||| | | ||| Sbjct: 82416 gttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggcagccg 82475 Query: 290 ctacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagtgatt 349 | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||| || Sbjct: 82476 ccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggtgctt 82535 Query: 350 ctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaa 409 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 82536 ctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagttgaa 82595 Query: 410 gagg 413 |||| Sbjct: 82596 gagg 82599 Score = 180 bits (91), Expect = 9e-42 Identities = 168/191 (87%), Gaps = 2/191 (1%) Strand = Plus / Plus Query: 670 ggctgcactgatcaagtgctaccttgccagcatccccgaaccgcttacgacgtttgctct 729 |||||||||||| |||||||| ||||| |||||||| || || ||||| || || |||| Sbjct: 83926 ggctgcactgataaagtgctatcttgctagcatccctgagccacttactacattctctct 83985 Query: 730 ttatgatgagcttaaagatgcgagggttagcattgatgatcttaagaac-atactgaaga 788 ||||||||| |||| |||||| ||||||||||||| ||| ||||||| |||||||||| Sbjct: 83986 ttatgatgaacttagagatgcaagggttagcattgcagat-ttaagaaatatactgaaga 84044 Query: 789 agcttccaaatgtgaactacatgacactagaatttgttacatcattgctactgagagtaa 848 ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||||||| Sbjct: 84045 agcttcccaatgtgaactacatgacactagagtttgttacagcactgctacttagagtaa 84104 Query: 849 gccgtaaatca 859 ||||||||||| Sbjct: 84105 gccgtaaatca 84115 Score = 133 bits (67), Expect = 2e-27 Identities = 115/131 (87%) Strand = Plus / Plus Query: 870 agatggactctcgtacccttgctgtggagttcgcacctttgatcatatggcaacaagggg 929 ||||||||||||||| |||||| ||||| || || ||||||||||| ||||| ||||| | Sbjct: 84786 agatggactctcgtagccttgcagtggaatttgcgcctttgatcatgtggcagcaaggtg 84845 Query: 930 attctggaacagatttgcggaatcatctcagattcacactgaaaccacctccaaaaatcg 989 | |||||||||||||||||||||||||| ||||| || || ||| ||||||||||||| | Sbjct: 84846 actctggaacagatttgcggaatcatcttagatttaccctaaaagcacctccaaaaattg 84905 Query: 990 tggacacaaca 1000 |||| |||||| Sbjct: 84906 tggatacaaca 84916 Score = 109 bits (55), Expect = 3e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 1024 agatgaggatgatgtggatgcttcgtcacaaatccccttggatgatgcttcgcctccaga 1083 ||||||||||||||||||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 85151 agatgaggatgatgtggatgcatcttcccaaatccccttggatgacgcgtcgcccccaga 85210 Query: 1084 ctacggtgccattgaggtgatccagtgcttgattgagcatcacaatcccatattcacgga 1143 ||| | | |||||||| ||||| | | ||||||||||||||| |||| ||||| || Sbjct: 85211 ttacagctcaattgaggtcatccaatctctcattgagcatcacaatgccattttcactga 85270 Query: 1144 tgcaaacgagactgtatggagat 1166 ||| |||||||| |||||||||| Sbjct: 85271 tgcgaacgagaccgtatggagat 85293 Score = 99.6 bits (50), Expect = 3e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 497 tttggtgttcctgttgaagccactgcacaacgggagcaatctggtaaagctgtgcctctg 556 ||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 83541 tttggtgttcccattgaagccaccgtacaacgagagcaatctggtaaagctgtgcctctg 83600 Query: 557 atactcgtgaggtgtgcagaccacttggttatatcagg 594 |||| ||||| |||||||| | ||||||||||||| Sbjct: 83601 gtacttgtgagatgtgcagattatctggttatatcagg 83638 Score = 83.8 bits (42), Expect = 2e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 596 ttgagtaatgagtacttgttcaaatctgaaggcgacagaaaagttcttcagcaactagtt 655 |||||||||||||||||||||||||| || || || | |||||||||||||||| |||| Sbjct: 83719 ttgagtaatgagtacttgttcaaatcagagggtgaaaaaaaagttcttcagcaattagtc 83778 Query: 656 tcactttacaatga 669 || ||||||||||| Sbjct: 83779 tctctttacaatga 83792 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 434 aaaagcaaaactattttgaacaatattgaacgctggcagaagg 476 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 83140 aaaagcaagactattttgaacaacattgaacgctggcagaagg 83182 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 106 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 165 ||||||||| | |||||||||||| ||||||| |||||| || |||||||||||||||| Sbjct: 81778 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 81837 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1202 ttagctcgtgctatgtacaagttccaggtcgtaggatgg 1240 ||||||||||| ||||||||||||||||| | ||||||| Sbjct: 85324 ttagctcgtgcaatgtacaagttccaggtaggaggatgg 85362
>gb|AC146615.2| Mus musculus BAC clone RP23-19K2 from chromosome 14, complete sequence Length = 192561 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1270 tccaaacttctttttctttttgtgg 1294 ||||||||||||||||||||||||| Sbjct: 157603 tccaaacttctttttctttttgtgg 157627
>gb|AC122391.4| Mus musculus BAC clone RP24-81C18 from 14, complete sequence Length = 184636 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1270 tccaaacttctttttctttttgtgg 1294 ||||||||||||||||||||||||| Sbjct: 164103 tccaaacttctttttctttttgtgg 164079
>ref|NM_203244.1| Arabidopsis thaliana Rho GTPase activator (AT5G61530) mRNA, complete cds Length = 1480 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414 ||||||||||| ||||| | ||||||||| ||||||| |||||||| Sbjct: 483 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 529 Score = 42.1 bits (21), Expect = 5.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163 |||||||| | ||||| || |||||| | || ||||| |||||| |||||||||||||| Sbjct: 1243 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1302 Query: 1164 g 1164 | Sbjct: 1303 g 1303
>ref|NM_125546.1| Arabidopsis thaliana Rho GTPase activator (AT5G61530) mRNA, complete cds Length = 1536 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414 ||||||||||| ||||| | ||||||||| ||||||| |||||||| Sbjct: 516 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 562 Score = 42.1 bits (21), Expect = 5.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163 |||||||| | ||||| || |||||| | || ||||| |||||| |||||||||||||| Sbjct: 1303 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1362 Query: 1164 g 1164 | Sbjct: 1363 g 1363
>gb|AY133882.1| Arabidopsis thaliana clone U10143 unknown protein (At5g61530) mRNA, complete cds Length = 1162 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414 ||||||||||| ||||| | ||||||||| ||||||| |||||||| Sbjct: 280 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 326 Score = 42.1 bits (21), Expect = 5.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163 |||||||| | ||||| || |||||| | || ||||| |||||| |||||||||||||| Sbjct: 1067 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1126 Query: 1164 g 1164 | Sbjct: 1127 g 1127
>gb|AY045924.1| Arabidopsis thaliana unknown protein (At5g61530) mRNA, complete cds Length = 1517 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414 ||||||||||| ||||| | ||||||||| ||||||| |||||||| Sbjct: 483 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 529 Score = 42.1 bits (21), Expect = 5.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163 |||||||| | ||||| || |||||| | || ||||| |||||| |||||||||||||| Sbjct: 1270 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1329 Query: 1164 g 1164 | Sbjct: 1330 g 1330
>gb|AY085460.1| Arabidopsis thaliana clone 152557 mRNA, complete sequence Length = 1536 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414 ||||||||||| ||||| | ||||||||| ||||||| |||||||| Sbjct: 516 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 562 Score = 42.1 bits (21), Expect = 5.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163 |||||||| | ||||| || |||||| | || ||||| |||||| |||||||||||||| Sbjct: 1303 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1362 Query: 1164 g 1164 | Sbjct: 1363 g 1363
>emb|BX831842.1|CNS0A1ZG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1480 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414 ||||||||||| ||||| | ||||||||| ||||||| |||||||| Sbjct: 502 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 548
>emb|BX831138.1|CNS0A1RB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 414 ||||||||||| ||||| | ||||||||| ||||||| |||||||| Sbjct: 481 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 527 Score = 42.1 bits (21), Expect = 5.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163 |||||||| | ||||| || |||||| | || ||||| |||||| |||||||||||||| Sbjct: 1243 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 1302 Query: 1164 g 1164 | Sbjct: 1303 g 1303
>gb|AC166602.2| Eulemur macaco macaco clone CH273-138L3, complete sequence Length = 172515 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1277 ttctttttctttttgtgggagt 1298 |||||||||||||||||||||| Sbjct: 147612 ttctttttctttttgtgggagt 147633
>emb|CR925808.19| Zebrafish DNA sequence from clone DKEY-200L5 in linkage group 10, complete sequence Length = 170902 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1271 ccaaacttctttttctttttgt 1292 |||||||||||||||||||||| Sbjct: 11663 ccaaacttctttttctttttgt 11684
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 438 gcaaaactattttgaacaatat 459 |||||||||||||||||||||| Sbjct: 27083800 gcaaaactattttgaacaatat 27083779
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 438 gcaaaactattttgaacaatat 459 |||||||||||||||||||||| Sbjct: 66922 gcaaaactattttgaacaatat 66943
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 44.1 bits (22), Expect = 1.4 Identities = 40/46 (86%) Strand = Plus / Plus Query: 368 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagagg 413 ||||||||||| ||||| | ||||||||| ||||||| ||||||| Sbjct: 17569 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagagg 17614 Score = 42.1 bits (21), Expect = 5.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1104 tccagtgcttgattgagcatcacaatcccatattcacggatgcaaacgagactgtatgga 1163 |||||||| | ||||| || |||||| | || ||||| |||||| |||||||||||||| Sbjct: 19097 tccagtgcctaattgaacaccacaatgcgattttcactgatgcagccgagactgtatgga 19156 Query: 1164 g 1164 | Sbjct: 19157 g 19157
>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b, complete sequence Length = 43428 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Plus Query: 776 aacatactgaagaagcttccaaatgtgaactacatgac 813 ||||||||||||| |||| ||| ||| ||||||||||| Sbjct: 41297 aacatactgaagaggctttcaagtgttaactacatgac 41334
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete sequence Length = 235868 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1272 caaacttctttttctttttgtg 1293 |||||||||||||||||||||| Sbjct: 81047 caaacttctttttctttttgtg 81068
>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete sequence Length = 194274 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1274 aacttctttttctttttgtggg 1295 |||||||||||||||||||||| Sbjct: 124677 aacttctttttctttttgtggg 124698
>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence Length = 203314 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1274 aacttctttttctttttgtggg 1295 |||||||||||||||||||||| Sbjct: 134021 aacttctttttctttttgtggg 134000
>emb|CU137657.2| Medicago truncatula chromosome 5 clone mte1-29c13, COMPLETE SEQUENCE Length = 145484 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1272 caaacttctttttctttttgt 1292 ||||||||||||||||||||| Sbjct: 38178 caaacttctttttctttttgt 38158
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 cttctttttctttttgtggga 1296 ||||||||||||||||||||| Sbjct: 12270929 cttctttttctttttgtggga 12270909
>ref|NM_001029878.1| Mus musculus LON peptidase N-terminal domain and ring finger 2 (Lonrf2), mRNA Length = 5077 Score = 42.1 bits (21), Expect = 5.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1277 ttctttttctttttgtgggagtaaaagtaggaa 1309 ||||||||||||||| ||| | ||||||||||| Sbjct: 2895 ttctttttctttttgggggggaaaaagtaggaa 2927
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1270 tccaaacttctttttcttttt 1290 ||||||||||||||||||||| Sbjct: 5007459 tccaaacttctttttcttttt 5007479
>gb|AC182734.3| Pan troglodytes BAC clone CH251-356H17 from chromosome 2, complete sequence Length = 209702 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1379 gaatacatttaatttagattt 1399 ||||||||||||||||||||| Sbjct: 195856 gaatacatttaatttagattt 195836
>gb|AC158548.10| Mus musculus chromosome 5, clone RP23-258F17, complete sequence Length = 227065 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 927 gggattctggaacagatttgc 947 ||||||||||||||||||||| Sbjct: 197060 gggattctggaacagatttgc 197040
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence Length = 156547 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 458 attgaacgctggcagaaggga 478 ||||||||||||||||||||| Sbjct: 36119 attgaacgctggcagaaggga 36139
>ref|XM_653478.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0966.2), mRNA Length = 771 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cgattcgatccgaacccatcc 86 ||||||||||||||||||||| Sbjct: 478 cgattcgatccgaacccatcc 498
>gb|AC120861.7| Mus musculus chromosome 5, clone RP23-60J23, complete sequence Length = 239102 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 927 gggattctggaacagatttgc 947 ||||||||||||||||||||| Sbjct: 146156 gggattctggaacagatttgc 146176
>gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, complete sequence Length = 174536 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 gttcaaatctgaaggcgacag 633 ||||||||||||||||||||| Sbjct: 87056 gttcaaatctgaaggcgacag 87036
>gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, complete sequence Length = 234142 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 agctgaagcaggcagggcaat 194 ||||||||||||||||||||| Sbjct: 138088 agctgaagcaggcagggcaat 138108
>gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosome 1, complete sequence Length = 177793 Score = 42.1 bits (21), Expect = 5.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1277 ttctttttctttttgtgggagtaaaagtaggaa 1309 ||||||||||||||| ||| | ||||||||||| Sbjct: 97203 ttctttttctttttgggggggaaaaagtaggaa 97171
>gb|DQ149914.1| Uncultured bacterium clone ARDNA17 16S ribosomal RNA gene, partial sequence Length = 655 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tcggtgggctatcttccagga 270 ||||||||||||||||||||| Sbjct: 134 tcggtgggctatcttccagga 114
>gb|AC102426.6| Mus musculus chromosome 1, clone RP24-88A10, complete sequence Length = 192016 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 458 attgaacgctggcagaaggga 478 ||||||||||||||||||||| Sbjct: 37415 attgaacgctggcagaaggga 37395
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1273 aaacttctttttctttttgtg 1293 ||||||||||||||||||||| Sbjct: 1291849 aaacttctttttctttttgtg 1291829
>ref|XM_627117.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_2140), partial mRNA Length = 312 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 818 gaatttgttacatcattgcta 838 ||||||||||||||||||||| Sbjct: 139 gaatttgttacatcattgcta 159
>dbj|AK156457.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830022J17 product:unclassifiable, full insert sequence Length = 1924 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 458 attgaacgctggcagaaggga 478 ||||||||||||||||||||| Sbjct: 865 attgaacgctggcagaaggga 845
>gb|AC007155.16| Arabidopsis thaliana chromosome 2 clone T18E17 map PR1, complete sequence Length = 96095 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tgatgttgctgggaaggttgg 234 ||||||||||||||||||||| Sbjct: 62323 tgatgttgctgggaaggttgg 62343
>gb|AC067742.7| Homo sapiens chromosome 10 clone RP11-508P23, complete sequence Length = 119222 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 963 tcacactgaaaccacctccaa 983 ||||||||||||||||||||| Sbjct: 112864 tcacactgaaaccacctccaa 112884
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 gcttcatctctgctgccgcta 335 ||||||||||||||||||||| Sbjct: 8848909 gcttcatctctgctgccgcta 8848889
>emb|AL139122.12| Human DNA sequence from clone RP11-360L4 on chromosome 10, complete sequence Length = 94759 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1270 tccaaacttctttttcttttt 1290 ||||||||||||||||||||| Sbjct: 29816 tccaaacttctttttcttttt 29796
>gb|AC154339.2| Mus musculus BAC clone RP23-248O15 from chromosome 13, complete sequence Length = 174982 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 440 aaaactattttgaacaatattgaac 464 ||||||||||| ||||||||||||| Sbjct: 1754 aaaactattttcaacaatattgaac 1778
>gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosome 3, complete sequence Length = 195603 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1380 aatacatttaatttagatttt 1400 ||||||||||||||||||||| Sbjct: 118662 aatacatttaatttagatttt 118682
>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete sequence Length = 180876 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 613 gttcaaatctgaaggcgacag 633 ||||||||||||||||||||| Sbjct: 155765 gttcaaatctgaaggcgacag 155785
>emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in linkage group 19 Contains part of a novel gene similar to CSMD (CUB and sushi multiple domains protein), complete sequence Length = 161104 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 596 ttgagtaatgagtacttgttcaaat 620 |||||||||||||| |||||||||| Sbjct: 142711 ttgagtaatgagtaattgttcaaat 142735
>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone BACR25I17, complete sequence Length = 157835 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 cttctttttctttttgtggga 1296 ||||||||||||||||||||| Sbjct: 144764 cttctttttctttttgtggga 144744
>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone BACR17I17, complete sequence Length = 159640 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1276 cttctttttctttttgtggga 1296 ||||||||||||||||||||| Sbjct: 121314 cttctttttctttttgtggga 121294
>gb|AC098800.3| Homo sapiens BAC clone RP11-666P13 from 2, complete sequence Length = 142003 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1379 gaatacatttaatttagattt 1399 ||||||||||||||||||||| Sbjct: 95118 gaatacatttaatttagattt 95098
>dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, complete sequence Length = 149685 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 agctgaagcaggcagggcaat 194 ||||||||||||||||||||| Sbjct: 132059 agctgaagcaggcagggcaat 132079
>gb|AC117451.3| Homo sapiens 3 BAC RP11-331K15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181637 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ctattttgaacaatattgaac 464 ||||||||||||||||||||| Sbjct: 100597 ctattttgaacaatattgaac 100617
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 gcttcatctctgctgccgcta 335 ||||||||||||||||||||| Sbjct: 119230 gcttcatctctgctgccgcta 119210
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 gcttcatctctgctgccgcta 335 ||||||||||||||||||||| Sbjct: 14538 gcttcatctctgctgccgcta 14518
>dbj|AB046434.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F28L21 Length = 35187 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tgatgttgctgggaaggttgg 234 ||||||||||||||||||||| Sbjct: 28766 tgatgttgctgggaaggttgg 28786
>gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18 Length = 88126 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tgatgttgctgggaaggttgg 234 ||||||||||||||||||||| Sbjct: 83506 tgatgttgctgggaaggttgg 83526
>gb|AC000133.1|ENAC000133 Emericella nidulans cosmid SW06E08, complete sequence Length = 38807 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cgattcgatccgaacccatcc 86 ||||||||||||||||||||| Sbjct: 26143 cgattcgatccgaacccatcc 26123
>gb|AC007004.3|AC007004 Homo sapiens clone NH0521D03, complete sequence Length = 35960 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 agctgaagcaggcagggcaat 194 ||||||||||||||||||||| Sbjct: 17580 agctgaagcaggcagggcaat 17560
>gb|AC004249.1|AC004249 Drosophila melanogaster (P1 DS00649 (D167)) DNA sequence, complete sequence Length = 79660 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1276 cttctttttctttttgtggga 1296 ||||||||||||||||||||| Sbjct: 57074 cttctttttctttttgtggga 57094
>gb|AC161871.5| Mus musculus BAC clone RP24-84N15 from chromosome 14, complete sequence Length = 204723 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1381 atacatttaatttagattttc 1401 ||||||||||||||||||||| Sbjct: 173553 atacatttaatttagattttc 173573
>gb|AC168072.3| Mus musculus BAC clone CH25-291I13 from chromosome 13, complete sequence Length = 110522 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 440 aaaactattttgaacaatattgaac 464 ||||||||||| ||||||||||||| Sbjct: 79015 aaaactattttcaacaatattgaac 79039 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 257,117,129 Number of extensions: 14694814 Number of successful extensions: 407066 Number of sequences better than 10.0: 63 Number of HSP's gapped: 407051 Number of HSP's successfully gapped: 102 Length of query: 1419 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1396 Effective length of database: 18,503,978,556 Effective search space: 25831554064176 Effective search space used: 25831554064176 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)