>Q5ZJC8:MTER1_CHICK mTERF domain-containing protein 1, mitochondrial precursor - Gallus|
            gallus (Chicken)
          Length = 405
 Score = 37.4 bits (85), Expect = 0.17
 Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 1/190 (0%)
 Frame = +3

Query: 549  FGSPENLLHVLKQNSYLLSSNIDKVVQPNVAFLRECGLDACDIAKLCISLPRLLSTKPER 728
            FG+ E +  ++ +  YLL  +++++      F  E GL       L I  PRLL+ K E 
Sbjct: 223  FGNAE-ITQMVSRAPYLLLFSVERLDNRLGFFKNELGLSVKKTKDLVIRFPRLLTGKLEP 281

Query: 729  VRA-MAACTESVGVRRGSGMFRKAMQAVAFRSEEKVAAKVAYLKNTFRWSDAEVAIAVFR 905
            V+  +  C    G  R                                    EV    F+
Sbjct: 282  VKENLQVCQVEFGFERN-----------------------------------EVQQIAFK 306

Query: 906  SPMVLTRSDDRLLRTSEFLISEVGLEPAYIAPRSVMVCLSLEGRLKPRYYVMKFLKEHGL 1085
            +P +LT S  RL +T ++L + +G+ P  +  R   V  S   R+K R+  + FL     
Sbjct: 307  TPKILTASKKRLRQTFDYLHNIMGI-PHNMLTRFPQVFNSKLLRIKERHMFLIFLGRAQY 365

Query: 1086 LNSGRSYLSV 1115
              +  SY+S+
Sbjct: 366  DPTKPSYISL 375



 Score = 32.7 bits (73), Expect = 4.3
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = +3

Query: 825  EKVAAKVAYLKNTFRWSDAEVAIAVFRSPMVLTRSDDRLLRTSEFLISEVGLEPAYIAPR 1004
            E +  +VAYLK+  ++ +AE+   V R+P +L  S +RL     F  +E+GL        
Sbjct: 209  EALETRVAYLKSK-KFGNAEITQMVSRAPYLLLFSVERLDNRLGFFKNELGLSVKKTKDL 267

Query: 1005 SVMVCLSLEGRLKP 1046
             +     L G+L+P
Sbjct: 268  VIRFPRLLTGKLEP 281

>O68032:SBCC_RHOCA Nuclease sbcCD subunit C - Rhodobacter capsulatus (Rhodopseudomonas|
           capsulata)
          Length = 1238

 Score = 34.3 bits (77), Expect = 1.5
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -1

Query: 403 AQSNRGSVATRAATSALERPRPARKARTASGLEGDLRPEILTEALRA-WGRVRPQVATR* 227
           A +   + A R A +A +  R   +AR     E   R +   EA RA WG  +P+V+ R 
Sbjct: 642 AAARGAAQAARDALTAAQGARATAEARGTQAAEDQRRAQTRAEAARAAWGDTQPRVSARP 701

Query: 226 SSTAKPG 206
            + A PG
Sbjct: 702 LAPALPG 708

>Q820K0:CHEB_NITEU Chemotaxis response regulator protein-glutamate methylesterase -|
            Nitrosomonas europaea
          Length = 358

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = -1

Query: 1453 IRIQEKHSGMKKFILGHGFFSTEWWHKHIRIQESNYQFHHKLPMTKPASRRHPSVD 1286
            IR++E   G ++ + GH + +    H H+ +++S   +  +L  T P +R  PSVD
Sbjct: 216  IRVKEAEGG-ERVLPGHAYLAPG--HSHLLLKKSGANYVTELSQTDPVNRHRPSVD 268

>Q9DC71:RT15_MOUSE 28S ribosomal protein S15, mitochondrial precursor - Mus musculus|
           (Mouse)
          Length = 258

 Score = 31.6 bits (70), Expect = 9.5
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +3

Query: 153 SLRRLLSTTVPEPPVPANPGFAVEDYLVATCGLTRPQALKASVKISGLKSPSKP 314
           +L  + +  V   PVPA  G +    L A CGL  P  L+A+   + ++ P +P
Sbjct: 8   ALSSVRAQAVTRAPVPALRGGSSASLLSARCGLQPPSLLRAARAYAAVQKPVQP 61

>Q6K953:GRXC4_ORYSJ Glutaredoxin-C4, chloroplast precursor - Oryza sativa subsp. japonica|
            (Rice)
          Length = 133

 Score = 31.6 bits (70), Expect = 9.5
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -3

Query: 1301 TSISGQPARSYQFA*PVLGSCESEISRHFPSASSIIVFSEVWCSFLVRVYELLHE 1137
            +S S +P+ S Q   P       + ++   ++S ++VFS+ +C F  RV  LL E
Sbjct: 7    SSSSSRPSDSEQLEEPSKPVMALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAE 61

>P72469:REG1_STRLI HTH-type transcriptional regulator reg1 - Streptomyces lividans|
          Length = 345

 Score = 31.6 bits (70), Expect = 9.5
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
 Frame = -1

Query: 442 ASPATLEVSVSMLAQSNRGSVATR-----AATSALERPRPARKARTASGLEGDLRPEILT 278
           A     E +VS +     G  AT      AA   L   RP R  R ++GL G + PE+  
Sbjct: 10  AQAGVSEATVSRVLNGKPGVAATTRQSVLAALDVLGYERPVRLRRRSAGLVGLVTPELEN 69

Query: 277 EALRAWGRVRPQVATR 230
               A+ +V  Q  TR
Sbjct: 70  PIFPAFAQVIGQALTR 85


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 243,425,238
Number of extensions: 5263255
Number of successful extensions: 14535
Number of sequences better than 10.0: 6
Number of HSP's gapped: 14525
Number of HSP's successfully gapped: 7
Length of query: 518
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 400
Effective length of database: 68,319,629
Effective search space: 27327851600
Effective search space used: 27327851600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)