>LOC_Os04g33450:12004.t03016:unspliced-genomic expressed protein|
Length = 1853
Score = 118 bits (253), Expect(5) = 4e-61
Identities = 56/81 (69%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 131 MQGEVEQQAPMQMVLRVKHPSSLSSGSDEAAEGEGSSRSALSVFKAKEEQIERKKMEVRD 310
MQGEV+Q M + ++ G E GE SSRSALSVFKAKEEQIERKKMEVR+
Sbjct: 86 MQGEVDQPMQMVLRVKHPSSLGGGGGGGEEEAGEASSRSALSVFKAKEEQIERKKMEVRE 265
Query: 311 KVFAQLGRVEEESKRLAFIRQ 373
KVFAQLGRVEEESKRLAFIRQ
Sbjct: 266 KVFAQLGRVEEESKRLAFIRQ 328
Score = 69.8 bits (146), Expect(5) = 4e-61
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2 / +3
Query: 374 ELEGMADPTRKEVESIQRRIDTVNRQLKPLSKSC 475
ELEGMADPTRKEVE I++RID VNRQLKPL K+C
Sbjct: 858 ELEGMADPTRKEVEVIRKRIDVVNRQLKPLGKTC 959
Score = 57.0 bits (118), Expect(5) = 4e-61
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +2 / +1
Query: 563 ELVSESERMRMKKLEELNKTVDSLY* 640
+LVSESERMRMKKLEELNKTVDSLY*
Sbjct: 1381 QLVSESERMRMKKLEELNKTVDSLY* 1458
Score = 46.9 bits (96), Expect(5) = 4e-61
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1 / +1
Query: 481 EGERIQRGSRGVQREEQGEGHTCQQAN 561
+GE IQR GVQREEQGEG C+QAN
Sbjct: 1210 KGEGIQRNPGGVQREEQGEGTACKQAN 1290
Score = 27.6 bits (54), Expect(5) = 4e-61
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 837 CCTVLVE*N*RI*AK 881
CC V VE*N*RI*A+
Sbjct: 1632 CCVVTVE*N*RI*AR 1676
Score = 85.8 bits (181), Expect(7) = 9e-41
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = -3 / -3
Query: 375 SCLMNARRLDSSSTRPSCANTLSLTSIFFLSICSSLALNTE 253
+C M ARRLDSSSTRPSCANT SLTSIFFLSICSSLALNT+
Sbjct: 330 TCRMKARRLDSSSTRPSCANTFSLTSIFFLSICSSLALNTD 208
Score = 46.4 bits (95), Expect(7) = 9e-41
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -1 / -1
Query: 560 LAC*QVCPSPCSSRCTPREPLCILSP 483
LAC Q PSPCSSRCTP LCI SP
Sbjct: 1289 LACLQAVPSPCSSRCTPPGFLCIPSP 1212
Score = 35.9 bits (72), Expect(7) = 9e-41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 616 VELFKLLHPHPLAFAHQL 563
V+L +LLH HPL FAHQL
Sbjct: 1434 VQLLELLHTHPLTFAHQL 1381
Score = 35.0 bits (70), Expect(7) = 9e-41
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 434 RSAAVLIPPPSW*DRPSLPAPV 369
RS++ PPPSW D PSLP P+
Sbjct: 918 RSSS*SPPPPSWLDPPSLPVPI 853
Score = 31.8 bits (63), Expect(7) = 9e-41
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -3
Query: 189 GCFTRSTICIG 157
GCFTRSTICIG
Sbjct: 138 GCFTRSTICIG 106
Score = 27.2 bits (53), Expect(7) = 9e-41
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 877 A*IRQFYSTRTVQQ 836
A*IRQFYST T QQ
Sbjct: 1672 A*IRQFYSTVTTQQ 1631
Score = 23.1 bits (44), Expect(7) = 9e-41
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1 / -3
Query: 803 QEERRKIKEESLTTWAVTS*HVQITYIQIHGTD 705
++ R+K + E +T +* + QIHGT+
Sbjct: 1605 EKRRKKKERERITLELQAT*TGHVNISQIHGTE 1507
Score = 42.8 bits (87), Expect(4) = 3e-16
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = +2 / +2
Query: 146 EQQAPMQMVLRVKHPSSLSSGSDEAAEGEGSSRS 247
E PMQMVLRVKHPSSL G E G + S
Sbjct: 95 EVDQPMQMVLRVKHPSSLGGGGGGGEEEAGEASS 196
Score = 40.0 bits (81), Expect(4) = 3e-16
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +1 / +2
Query: 373 GAGRDGRSYQEGGGINTAADRHRXXXXXXXXXELRQEGE 489
G GRDG S QEGGG + DR LRQEGE
Sbjct: 857 GTGRDGGSNQEGGGGDQEEDRRGEPSAQASRQNLRQEGE 973
Score = 40.0 bits (81), Expect(4) = 3e-16
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 512 AYNEKSKEKGILVNRLIELVSESERM 589
AYNEK+KEK +LVNRLIE+ ++R+
Sbjct: 1241 AYNEKNKEKALLVNRLIEVSRINKRL 1318
Score = 24.9 bits (48), Expect(4) = 3e-16
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 838 VAPSLLSKTDVFKRK 882
VA SL SKTDVFK++
Sbjct: 1633 VALSLSSKTDVFKQE 1677
Score = 60.2 bits (125), Expect(3) = 3e-12
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = -3 / -2
Query: 513 ASRTSLYSFSFLTQLLLRGLSWRLTVSIRRCIDSTSFLVGSAIPSSS 373
+S + +F+FLTQ+L RGLS R T SI I STSFLVGSAIPSSS
Sbjct: 997 SSAHQVCAFTFLTQVLPRGLS*RFTTSILFLITSTSFLVGSAIPSSS 857
Score = 27.6 bits (54), Expect(3) = 3e-12
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 373 LSYEC*ALGLLLDASELR 320
LS E ALGLLLDA+ELR
Sbjct: 328 LSDEGKALGLLLDAAELR 275
Score = 27.2 bits (53), Expect(3) = 3e-12
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1 / -1
Query: 875 LNTSVLLNKDGATRWTQTRQRNHKQEERRKIKEESLT 765
LNTSVLL+ D AT + E++++ E L+
Sbjct: 1670 LNTSVLLDSDNATNTQAN*LTERRGEKKKRENESLLS 1560
Score = 41.8 bits (85), Expect(3) = 3e-08
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -3 / -3
Query: 537 FSLLFSLYASRTSLYSFSFLT 475
FSL FSLYASR SLYSFSF++
Sbjct: 1266 FSLFFSLYASRISLYSFSFIS 1204
Score = 33.1 bits (66), Expect(3) = 3e-08
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 436 VDPPLY*FHLLPGRIGHPFQLLS 368
VDP HLLPG I HPFQ LS
Sbjct: 920 VDPLPDHLHLLPGWIRHPFQFLS 852
Score = 26.3 bits (51), Expect(3) = 3e-08
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / -3
Query: 882 FSLKYVSFTQQGRCNKMDS 826
F LKYVSFT+Q + NK S
Sbjct: 1677 FLLKYVSFTRQ*QRNKHPS 1621
Score = 33.6 bits (67), Expect(2) = 1.0
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 378 WKGWPILPGRRW 413
WKGW I PGRRW
Sbjct: 862 WKGWRIQPGRRW 897
Score = 22.1 bits (42), Expect(2) = 1.0
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 836 LLHRPC*VKLTYLSE 880
LL C VKLTYLS+
Sbjct: 1631 LLRCHCRVKLTYLSK 1675
>LOC_Os02g32650:12002.t02908:unspliced-genomic expressed protein|
Length = 2319
Score = 90.0 bits (190), Expect(4) = 9e-45
Identities = 38/48 (79%), Positives = 45/48 (93%)
Frame = +2 / +2
Query: 230 EGSSRSALSVFKAKEEQIERKKMEVRDKVFAQLGRVEEESKRLAFIRQ 373
+ SSRSALS+FK KEE+IERKK+EVR+KVF+ LGRVEEE+KRLAFIRQ
Sbjct: 245 QSSSRSALSLFKEKEEEIERKKLEVREKVFSMLGRVEEETKRLAFIRQ 388
Score = 66.1 bits (138), Expect(4) = 9e-45
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +2 / +1
Query: 371 QELEGMADPTRKEVESIQRRIDTVNRQLKPLSKSC 475
QELE M+DPTR+EVE+I++RID VNRQLKPL K+C
Sbjct: 478 QELEVMSDPTRREVETIRKRIDKVNRQLKPLGKNC 582
Score = 52.8 bits (109), Expect(4) = 9e-45
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +2 / +1
Query: 557 LIELVSESERMRMKKLEELNKTVDSLY*T 643
L +LV ESE++RMKKLEELNKTV+SLY*T
Sbjct: 1984 LEQLVGESEQLRMKKLEELNKTVESLY*T 2070
Score = 37.7 bits (76), Expect(4) = 9e-45
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1 / +2
Query: 475 RQEGERIQRGSRGVQREEQGEGHTCQQAN 561
+Q GE IQ RG+QREEQ E + C+Q +
Sbjct: 725 KQTGEGIQGVPRGLQREEQRESNACEQVD 811
Score = 53.3 bits (110), Expect(4) = 6e-22
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -3 / -1
Query: 366 MNARRLDSSSTRPSCANTLSLTSIFFLSICSSLALNTE 253
M ARRL SSSTRPS NT S TS FF SI SS +LN++
Sbjct: 381 MKARRLVSSSTRPSMENTFSRTSSFFRSISSSFSLNSD 268
Score = 48.7 bits (100), Expect(4) = 6e-22
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -3 / -2
Query: 486 SFLTQLLLRGLSWRLTVSIRRCIDSTSFLVGSAIPSSSC 370
+FL Q L GLSWR T+S+R I STS VGS I SSSC
Sbjct: 593 TFLRQFLPSGLSWRFTLSMRFRIVSTSRRVGSDITSSSC 477
Score = 33.6 bits (67), Expect(4) = 6e-22
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -3
Query: 537 FSLLFSLYASRTSLYSFSFL 478
FSLLFSL ASR +LYSFS L
Sbjct: 787 FSLLFSL*ASRHALYSFSCL 728
Score = 32.7 bits (65), Expect(4) = 6e-22
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2 / -1
Query: 616 VELFKLLHPHPLAFAHQLY*PVDKY 542
V+LF+LLHP LA AH+L + KY
Sbjct: 2043 VQLFELLHPQLLALAHKLLKIIWKY 1969
Score = 35.0 bits (70), Expect(2) = 0.003
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 512 AYNEKSKEKGILVNRLIEL 568
AYNEKS EK LVNRL+E+
Sbjct: 762 AYNEKSNEKATLVNRLMEV 818
Score = 29.9 bits (59), Expect(2) = 0.003
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +1 / +3
Query: 373 GAGRDGRSYQEGGGINTAADRHRXXXXXXXXXELRQEGE 489
GAG D S GGG +T A R EL QEGE
Sbjct: 480 GAGGDVGSDAAGGGDDTEAHRQGEPPAQAARQELPQEGE 596
Score = 29.5 bits (58), Expect(2) = 0.37
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1 / -1
Query: 554 C*QVCPSPCSSRCTPREPLCILSP 483
C Q S CSSRC P CI SP
Sbjct: 804 CSQALLSRCSSRCKPLGTPCIPSP 733
Score = 28.1 bits (55), Expect(2) = 0.37
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1 / -3
Query: 437 CRSAAVLIPPPSW*DRPSLPAP 372
CR A+V PPP+ D S PAP
Sbjct: 544 CRCASVSSPPPAASDPTSPPAP 479
>LOC_Os03g15320:12003.t01318:unspliced-genomic glyoxal oxidase, putative, expressed|
Length = 1882
Score = 27.6 bits (54), Expect(2) = 8.1
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -3 / +2
Query: 462 RGLSWRLTVSIRRCIDSTSFLVGSAIPSSSCLMNARRLDSSSTRPS 325
RG +W + R +TS SA SSS ARR S T PS
Sbjct: 275 RGSAWSPWTAPRTPPSTTSRRTRSARSSSSPTRGARRAPSRPTAPS 412
Score = 24.9 bits (48), Expect(2) = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 548 QVCPSPCSSRCTPR 507
Q+ PSPCSS PR
Sbjct: 54 QLYPSPCSSSSDPR 95
>LOC_Os05g51700:12005.t04595:unspliced-genomic nucleoside diphosphate kinase 4, chloroplast precursor, putative,|
expressed
Length = 3078
Score = 31.3 bits (62), Expect = 9.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3 / +1
Query: 420 IDSTSFLVGSAIPSSSCLMNARRLDSSSTRPSCANTLSLTSIFFLSIC 277
I S+ V S +PS++ + A + + SC TL+ T +F +SIC
Sbjct: 1300 ISSSLRFVKSMVPSTTTNILASGRPTCNQFQSCNQTLNCTLLFIVSIC 1443
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 243,021,717
Number of extensions: 3195624
Number of successful extensions: 17180
Number of sequences better than 10.0: 31
Length of query: 297
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 248
Effective length of database: 52,856,264
Effective search space: 13108353472
Effective search space used: 13108353472
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)