| Clone Name | FLbaf34j06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059255.1| Oryza sativa (japonica cultivar-group) Os04g0408600 (Os04g0408600) mRNA, complete cds Length = 951 Score = 256 bits (129), Expect = 1e-64 Identities = 171/185 (92%) Strand = Plus / Plus Query: 230 gaggggtcgtccaggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagagg 289 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 169 gaggcgtcgtcgaggtcggcgctgtcggtgttcaaggccaaggaggagcagatcgagagg 228 Query: 290 aagaagatggaggtcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtcc 349 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 229 aagaagatggaggtgagggagaaggtgttcgcgcagctcggccgcgtcgaggaggagtcc 288 Query: 350 aagcgcctagcattcataagacaggagctggaagggatggccgatcctaccaggaaggag 409 |||||||| || ||||| ||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 289 aagcgccttgccttcatccgacaggaactggaagggatggcggatccaaccaggaaggag 348 Query: 410 gtgga 414 ||||| Sbjct: 349 gtgga 353 Score = 188 bits (95), Expect = 2e-44 Identities = 167/191 (87%) Strand = Plus / Plus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaaggagaaagaatacaaagag 502 ||||| ||||||||||| ||| |||| | |||||||||||||||||| ||||||||||| Sbjct: 382 aaccgtcagctcaagcctctcggcaaaacctgcgtcaagaaggagaaggaatacaaagaa 441 Query: 503 gttctcgaggcgtacaacgagaagagcaaggagaagggcatacttgtcaacaggctaata 562 | || ||||||||||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 442 atcctggaggcgtacaacgagaagaacaaggagaaggcactgcttgtaaacaggctaatt 501 Query: 563 gagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagctcaacaagacg 622 ||||||||||||||||| ||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 502 gagctggtgagcgaaagtgagaggatgcgtatgaagaagctcgaggagctgaacaagacg 561 Query: 623 gtcgactcact 633 ||||| ||||| Sbjct: 562 gtcgattcact 572 Score = 85.7 bits (43), Expect = 3e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 157 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 199 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 132 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Plus Query: 855 gagtaaaactgacgtatttaagc 877 ||||||||||||||||||||||| Sbjct: 771 gagtaaaactgacgtatttaagc 793
>gb|AY224583.1| Oryza sativa (japonica cultivar-group) isolate 30854 unknown mRNA Length = 510 Score = 256 bits (129), Expect = 1e-64 Identities = 171/185 (92%) Strand = Plus / Plus Query: 230 gaggggtcgtccaggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagagg 289 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 100 gaggcgtcgtcgaggtcggcgctgtcggtgttcaaggccaaggaggagcagatcgagagg 159 Query: 290 aagaagatggaggtcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtcc 349 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 160 aagaagatggaggtgagggagaaggtgttcgcgcagctcggccgcgtcgaggaggagtcc 219 Query: 350 aagcgcctagcattcataagacaggagctggaagggatggccgatcctaccaggaaggag 409 |||||||| || ||||| ||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 220 aagcgccttgccttcatccgacaggaactggaagggatggcggatccaaccaggaaggag 279 Query: 410 gtgga 414 ||||| Sbjct: 280 gtgga 284 Score = 188 bits (95), Expect = 2e-44 Identities = 167/191 (87%) Strand = Plus / Plus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaaggagaaagaatacaaagag 502 ||||| ||||||||||| ||| |||| | |||||||||||||||||| ||||||||||| Sbjct: 313 aaccgtcagctcaagcctctcggcaaaacctgcgtcaagaaggagaaggaatacaaagaa 372 Query: 503 gttctcgaggcgtacaacgagaagagcaaggagaagggcatacttgtcaacaggctaata 562 | || ||||||||||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 373 atcctggaggcgtacaacgagaagaacaaggagaaggcactgcttgtaaacaggctaatt 432 Query: 563 gagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagctcaacaagacg 622 ||||||||||||||||| ||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 433 gagctggtgagcgaaagtgagaggatgcgtatgaagaagctcgaggagctgaacaagacg 492 Query: 623 gtcgactcact 633 ||||| ||||| Sbjct: 493 gtcgattcact 503 Score = 85.7 bits (43), Expect = 3e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 157 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 199 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 63
>dbj|AK121434.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139O07, full insert sequence Length = 952 Score = 256 bits (129), Expect = 1e-64 Identities = 171/185 (92%) Strand = Plus / Plus Query: 230 gaggggtcgtccaggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagagg 289 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 170 gaggcgtcgtcgaggtcggcgctgtcggtgttcaaggccaaggaggagcagatcgagagg 229 Query: 290 aagaagatggaggtcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtcc 349 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 230 aagaagatggaggtgagggagaaggtgttcgcgcagctcggccgcgtcgaggaggagtcc 289 Query: 350 aagcgcctagcattcataagacaggagctggaagggatggccgatcctaccaggaaggag 409 |||||||| || ||||| ||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 290 aagcgccttgccttcatccgacaggaactggaagggatggcggatccaaccaggaaggag 349 Query: 410 gtgga 414 ||||| Sbjct: 350 gtgga 354 Score = 180 bits (91), Expect = 6e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaaggagaaagaatacaaagag 502 ||||| ||||||||||| ||| | || | |||||||||||||||||| ||||||||||| Sbjct: 383 aaccgtcagctcaagcctctcggtaaaacctgcgtcaagaaggagaaggaatacaaagaa 442 Query: 503 gttctcgaggcgtacaacgagaagagcaaggagaagggcatacttgtcaacaggctaata 562 | || ||||||||||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 443 atcctggaggcgtacaacgagaagaacaaggagaaggcactgcttgtaaacaggctaatt 502 Query: 563 gagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagctcaacaagacg 622 ||||||||||||||||| ||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 503 gagctggtgagcgaaagtgagaggatgcgtatgaagaagctcgaggagctgaacaagacg 562 Query: 623 gtcgactcact 633 ||||| ||||| Sbjct: 563 gtcgattcact 573 Score = 85.7 bits (43), Expect = 3e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 157 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 199 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 133 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Plus Query: 855 gagtaaaactgacgtatttaagc 877 ||||||||||||||||||||||| Sbjct: 772 gagtaaaactgacgtatttaagc 794
>dbj|AK071186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086D18, full insert sequence Length = 1961 Score = 256 bits (129), Expect = 1e-64 Identities = 171/185 (92%) Strand = Plus / Plus Query: 230 gaggggtcgtccaggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagagg 289 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1425 gaggcgtcgtcgaggtcggcgctgtcggtgttcaaggccaaggaggagcagatcgagagg 1484 Query: 290 aagaagatggaggtcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtcc 349 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 1485 aagaagatggaggtgagggagaaggtgttcgcgcagctcggccgcgtcgaggaggagtcc 1544 Query: 350 aagcgcctagcattcataagacaggagctggaagggatggccgatcctaccaggaaggag 409 |||||||| || ||||| ||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 1545 aagcgccttgccttcatccgacaggaactggaagggatggcggatccaaccaggaaggag 1604 Query: 410 gtgga 414 ||||| Sbjct: 1605 gtgga 1609 Score = 188 bits (95), Expect = 2e-44 Identities = 167/191 (87%) Strand = Plus / Plus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaaggagaaagaatacaaagag 502 ||||| ||||||||||| ||| |||| | |||||||||||||||||| ||||||||||| Sbjct: 1638 aaccgtcagctcaagcctctcggcaaaacctgcgtcaagaaggagaaggaatacaaagaa 1697 Query: 503 gttctcgaggcgtacaacgagaagagcaaggagaagggcatacttgtcaacaggctaata 562 | || ||||||||||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1698 atcctggaggcgtacaacgagaagaacaaggagaaggcactgcttgtaaacaggctaatt 1757 Query: 563 gagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagctcaacaagacg 622 ||||||||||||||||| ||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 1758 gagctggtgagcgaaagtgagaggatgcgtatgaagaagctcgaggagctgaacaagacg 1817 Query: 623 gtcgactcact 633 ||||| ||||| Sbjct: 1818 gtcgattcact 1828 Score = 85.7 bits (43), Expect = 3e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 157 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 199 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1346 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 1388
>emb|CT833940.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA004H24, full insert sequence Length = 707 Score = 252 bits (127), Expect = 2e-63 Identities = 166/179 (92%) Strand = Plus / Plus Query: 236 tcgtccaggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaag 295 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 168 tcgtcgaggtcggcgctgtcggtgttcaaggccaaggaggagcagatcgagaggaagaag 227 Query: 296 atggaggtcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtccaagcgc 355 |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 228 atggaggtgagggagaaggtgttcgcgcagctcggccgcgtcgaggaggagtccaagcgc 287 Query: 356 ctagcattcataagacaggagctggaagggatggccgatcctaccaggaaggaggtgga 414 || || ||||| ||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 288 cttgccttcatccgacaggaactggaagggatggcggatccaaccaggaaggaggtgga 346 Score = 188 bits (95), Expect = 2e-44 Identities = 167/191 (87%) Strand = Plus / Plus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaaggagaaagaatacaaagag 502 ||||| ||||||||||| ||| |||| | |||||||||||||||||| ||||||||||| Sbjct: 375 aaccgtcagctcaagcctctcggcaaaacctgcgtcaagaaggagaaggaatacaaagaa 434 Query: 503 gttctcgaggcgtacaacgagaagagcaaggagaagggcatacttgtcaacaggctaata 562 | || ||||||||||||||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 435 atcctggaggcgtacaacgagaagaacaaggagaaggcactgcttgtaaacaggctaatt 494 Query: 563 gagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagctcaacaagacg 622 ||||||||||||||||| ||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 495 gagctggtgagcgaaagtgagaggatgcgtatgaagaagctcgaggagctgaacaagacg 554 Query: 623 gtcgactcact 633 ||||| ||||| Sbjct: 555 gtcgattcact 565 Score = 85.7 bits (43), Expect = 3e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 157 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 199 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 125
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 200 bits (101), Expect = 6e-48 Identities = 128/137 (93%) Strand = Plus / Minus Query: 230 gaggggtcgtccaggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagagg 289 |||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 20232193 gaggcgtcgtcgaggtcggcgctgtcggtgttcaaggccaaggaggagcagatcgagagg 20232134 Query: 290 aagaagatggaggtcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtcc 349 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 20232133 aagaagatggaggtgagggagaaggtgttcgcgcagctcggccgcgtcgaggaggagtcc 20232074 Query: 350 aagcgcctagcattcat 366 |||||||| || ||||| Sbjct: 20232073 aagcgccttgccttcat 20232057 Score = 85.7 bits (43), Expect = 3e-13 Identities = 43/43 (100%) Strand = Plus / Minus Query: 157 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 199 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20232272 gccgatgcagatggtgctgcgggtgaagcacccgtcgtcgctg 20232230 Score = 83.8 bits (42), Expect = 1e-12 Identities = 63/70 (90%) Strand = Plus / Minus Query: 564 agctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagctcaacaagacgg 623 |||||||||||||||| ||||||||| | ||||||||||| || ||||| |||||||||| Sbjct: 20230996 agctggtgagcgaaagtgagaggatgcgtatgaagaagctcgaggagctgaacaagacgg 20230937 Query: 624 tcgactcact 633 |||| ||||| Sbjct: 20230936 tcgattcact 20230927 Score = 71.9 bits (36), Expect = 4e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 482 aaggagaaagaatacaaagaggttctcgaggcgtacaacgagaagagcaaggagaagggc 541 |||||||| ||||||||||| | || ||||||||||||||||||| ||||||||||| Sbjct: 20231167 aaggagaaggaatacaaagaaatcctggaggcgtacaacgagaagaacaaggagaaggca 20231108 Query: 542 atacttgtcaacaggctaat 561 | ||||| ||||||||||| Sbjct: 20231107 ctgcttgtaaacaggctaat 20231088 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 372 aggagctggaagggatggccgatcctaccaggaaggaggtgga 414 |||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 20231522 aggaactggaagggatggcggatccaaccaggaaggaggtgga 20231480 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Minus Query: 855 gagtaaaactgacgtatttaagc 877 ||||||||||||||||||||||| Sbjct: 20230728 gagtaaaactgacgtatttaagc 20230706 Score = 46.1 bits (23), Expect = 0.22 Identities = 38/43 (88%) Strand = Plus / Minus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaagg 485 ||||| ||||||||||| ||| |||| | |||||||||||||| Sbjct: 20231451 aaccgtcagctcaagcctctcggcaaaacctgcgtcaagaagg 20231409
>ref|NM_001053543.1| Oryza sativa (japonica cultivar-group) Os02g0528100 (Os02g0528100) mRNA, complete cds Length = 905 Score = 170 bits (86), Expect = 5e-39 Identities = 308/382 (80%) Strand = Plus / Plus Query: 243 ggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaagatggagg 302 |||||||||| || ||||||||| ||||||||| |||||||| |||||||| |||||| Sbjct: 258 ggtcggcgctgtcgctgttcaaggagaaggaggaggagatcgagcggaagaagctggagg 317 Query: 303 tcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtccaagcgcctagcat 362 | |||| ||||||||| | |||||| || |||||||||||| |||||||||| || | Sbjct: 318 tgcgggagaaggtgttctccatgctcggccgggtcgaggaggagaccaagcgcctcgcct 377 Query: 363 tcataagacaggagctggaagggatggccgatcctaccaggaaggaggtggaatcaatac 422 |||| | ||||||||||| | |||| | ||||| || || ||||||||| | |||| Sbjct: 378 tcatccgccaggagctggaggtgatgtcggatccgacgcggcgggaggtggagacgatac 437 Query: 423 agcggcggatcgacaccgtcaaccgccagctcaagcccctcagcaagagctgcgtcaaga 482 | ||| ||||||| || ||||||||||||||||| ||| |||||| |||| |||||| Sbjct: 438 ggaagcgcatcgacaaggtgaaccgccagctcaagccgctcggcaagaactgcctcaaga 497 Query: 483 aggagaaagaatacaaagaggttctcgaggcgtacaacgagaagagcaaggagaagggca 542 ||||||| |||||||| | | || ||||| ||||||||||||||||| ||||| | | Sbjct: 498 aggagaaggaatacaaggcgtgcctagaggcttacaacgagaagagcaacgagaaagcaa 557 Query: 543 tacttgtcaacaggctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagc 602 ||||| |||||| | || ||||| ||| |||| |||||| | || |||||||||||| Sbjct: 558 cgcttgtgaacaggttgatggagcttgtgggcgagagcgagcagctgcggatgaagaagc 617 Query: 603 ttgaagagctcaacaagacggt 624 | |||||||| ||||| ||||| Sbjct: 618 tcgaagagctgaacaaaacggt 639
>dbj|AK063839.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-B11, full insert sequence Length = 906 Score = 170 bits (86), Expect = 5e-39 Identities = 308/382 (80%) Strand = Plus / Plus Query: 243 ggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaagatggagg 302 |||||||||| || ||||||||| ||||||||| |||||||| |||||||| |||||| Sbjct: 258 ggtcggcgctgtcgctgttcaaggagaaggaggaggagatcgagcggaagaagctggagg 317 Query: 303 tcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtccaagcgcctagcat 362 | |||| ||||||||| | |||||| || |||||||||||| |||||||||| || | Sbjct: 318 tgcgggagaaggtgttctccatgctcggccgggtcgaggaggagaccaagcgcctcgcct 377 Query: 363 tcataagacaggagctggaagggatggccgatcctaccaggaaggaggtggaatcaatac 422 |||| | ||||||||||| | |||| | ||||| || || ||||||||| | |||| Sbjct: 378 tcatccgccaggagctggaggtgatgtcggatccgacgcggcgggaggtggagacgatac 437 Query: 423 agcggcggatcgacaccgtcaaccgccagctcaagcccctcagcaagagctgcgtcaaga 482 | ||| ||||||| || ||||||||||||||||| ||| |||||| |||| |||||| Sbjct: 438 ggaagcgcatcgacaaggtgaaccgccagctcaagccgctcggcaagaactgcctcaaga 497 Query: 483 aggagaaagaatacaaagaggttctcgaggcgtacaacgagaagagcaaggagaagggca 542 ||||||| |||||||| | | || ||||| ||||||||||||||||| ||||| | | Sbjct: 498 aggagaaggaatacaaggcgtgcctagaggcttacaacgagaagagcaacgagaaagcaa 557 Query: 543 tacttgtcaacaggctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagc 602 ||||| |||||| | || ||||| ||| |||| |||||| | || |||||||||||| Sbjct: 558 cgcttgtgaacaggttgatggagcttgtgggcgagagcgagcagctgcggatgaagaagc 617 Query: 603 ttgaagagctcaacaagacggt 624 | |||||||| ||||| ||||| Sbjct: 618 tcgaagagctgaacaaaacggt 639
>dbj|AK103078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118E13, full insert sequence Length = 1950 Score = 149 bits (75), Expect = 2e-32 Identities = 240/295 (81%) Strand = Plus / Plus Query: 243 ggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaagatggagg 302 |||||||||| || ||||||||| ||||||||| |||||||| |||||||| |||||| Sbjct: 197 ggtcggcgctgtcgctgttcaaggagaaggaggaggagatcgagcggaagaagctggagg 256 Query: 303 tcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtccaagcgcctagcat 362 | |||| ||||||||| | |||||| || |||||||||||| |||||||||| || | Sbjct: 257 tgcgggagaaggtgttctccatgctcggccgggtcgaggaggagaccaagcgcctcgcct 316 Query: 363 tcataagacaggagctggaagggatggccgatcctaccaggaaggaggtggaatcaatac 422 |||| | ||||||||||| | |||| | ||||| || || ||||||||| | |||| Sbjct: 317 tcatccgccaggagctggaggtgatgtcggatccgacgcggcgggaggtggagacgatac 376 Query: 423 agcggcggatcgacaccgtcaaccgccagctcaagcccctcagcaagagctgcgtcaaga 482 | ||| ||||||| || ||||||||||||||||| ||| |||||| |||| |||||| Sbjct: 377 ggaagcgcatcgacaaggtgaaccgccagctcaagccgctcggcaagaactgcctcaaga 436 Query: 483 aggagaaagaatacaaagaggttctcgaggcgtacaacgagaagagcaaggagaa 537 ||||||| |||||||| | | || ||||| ||||||||||||||||| ||||| Sbjct: 437 aggagaaggaatacaaggcgtgcctagaggcttacaacgagaagagcaacgagaa 491 Score = 44.1 bits (22), Expect = 0.85 Identities = 31/34 (91%) Strand = Plus / Plus Query: 591 ggatgaagaagcttgaagagctcaacaagacggt 624 ||||||||||||| |||||||| ||||| ||||| Sbjct: 1720 ggatgaagaagctcgaagagctgaacaaaacggt 1753
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 87.7 bits (44), Expect = 6e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 243 ggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaagatggagg 302 |||||||||| || ||||||||| ||||||||| |||||||| |||||||| |||||| Sbjct: 19374031 ggtcggcgctgtcgctgttcaaggagaaggaggaggagatcgagcggaagaagctggagg 19373972 Query: 303 tcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtccaagcgcctagcat 362 | |||| ||||||||| | |||||| || |||||||||||| |||||||||| || | Sbjct: 19373971 tgcgggagaaggtgttctccatgctcggccgggtcgaggaggagaccaagcgcctcgcct 19373912 Query: 363 tcat 366 |||| Sbjct: 19373911 tcat 19373908 Score = 54.0 bits (27), Expect = 9e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaagg 485 ||||||||||||||||| ||| |||||| |||| ||||||||| Sbjct: 19373739 aaccgccagctcaagccgctcggcaagaactgcctcaagaagg 19373697 Score = 44.1 bits (22), Expect = 0.85 Identities = 31/34 (91%) Strand = Plus / Minus Query: 591 ggatgaagaagcttgaagagctcaacaagacggt 624 ||||||||||||| |||||||| ||||| ||||| Sbjct: 19372271 ggatgaagaagctcgaagagctgaacaaaacggt 19372238 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 15991627 gctctccgtgttcaaggccaa 15991647 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 gaggcgtacaacgagaagagcaaggagaa 537 ||||| ||||||||||||||||| ||||| Sbjct: 19373530 gaggcttacaacgagaagagcaacgagaa 19373502
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 87.7 bits (44), Expect = 6e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 243 ggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaagatggagg 302 |||||||||| || ||||||||| ||||||||| |||||||| |||||||| |||||| Sbjct: 59522 ggtcggcgctgtcgctgttcaaggagaaggaggaggagatcgagcggaagaagctggagg 59463 Query: 303 tcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtccaagcgcctagcat 362 | |||| ||||||||| | |||||| || |||||||||||| |||||||||| || | Sbjct: 59462 tgcgggagaaggtgttctccatgctcggccgggtcgaggaggagaccaagcgcctcgcct 59403 Query: 363 tcat 366 |||| Sbjct: 59402 tcat 59399 Score = 54.0 bits (27), Expect = 9e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaagg 485 ||||||||||||||||| ||| |||||| |||| ||||||||| Sbjct: 59230 aaccgccagctcaagccgctcggcaagaactgcctcaagaagg 59188 Score = 44.1 bits (22), Expect = 0.85 Identities = 31/34 (91%) Strand = Plus / Minus Query: 591 ggatgaagaagcttgaagagctcaacaagacggt 624 ||||||||||||| |||||||| ||||| ||||| Sbjct: 57762 ggatgaagaagctcgaagagctgaacaaaacggt 57729 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 gaggcgtacaacgagaagagcaaggagaa 537 ||||| ||||||||||||||||| ||||| Sbjct: 59021 gaggcttacaacgagaagagcaacgagaa 58993
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 87.7 bits (44), Expect = 6e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 243 ggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaagatggagg 302 |||||||||| || ||||||||| ||||||||| |||||||| |||||||| |||||| Sbjct: 141829 ggtcggcgctgtcgctgttcaaggagaaggaggaggagatcgagcggaagaagctggagg 141770 Query: 303 tcagggacaaggtgttcgcgcagctcggacgcgtcgaggaggagtccaagcgcctagcat 362 | |||| ||||||||| | |||||| || |||||||||||| |||||||||| || | Sbjct: 141769 tgcgggagaaggtgttctccatgctcggccgggtcgaggaggagaccaagcgcctcgcct 141710 Query: 363 tcat 366 |||| Sbjct: 141709 tcat 141706 Score = 54.0 bits (27), Expect = 9e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 443 aaccgccagctcaagcccctcagcaagagctgcgtcaagaagg 485 ||||||||||||||||| ||| |||||| |||| ||||||||| Sbjct: 141537 aaccgccagctcaagccgctcggcaagaactgcctcaagaagg 141495 Score = 44.1 bits (22), Expect = 0.85 Identities = 31/34 (91%) Strand = Plus / Minus Query: 591 ggatgaagaagcttgaagagctcaacaagacggt 624 ||||||||||||| |||||||| ||||| ||||| Sbjct: 140069 ggatgaagaagctcgaagagctgaacaaaacggt 140036 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 gaggcgtacaacgagaagagcaaggagaa 537 ||||| ||||||||||||||||| ||||| Sbjct: 141328 gaggcttacaacgagaagagcaacgagaa 141300
>dbj|AB206873.1| Prunus persica mRNA, microsatellite marker M21a Length = 726 Score = 67.9 bits (34), Expect = 6e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 266 gccaaggaggagcagatcgagaggaagaagatggaggtcagggacaaggt 315 ||||| |||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 324 gccaaagaggaggagatcgagaggaagaagatggaggtcagagaaaaggt 373 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 557 ctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 ||||| ||||||||||| ||||| |||| | |||||||||||||||| || ||||| Sbjct: 615 ctaatggagctggtgagtgaaagtgagaagttgaggatgaagaagctggaggagct 670
>dbj|AB263748.2| Ipomoea trifida DNA, self-incompatibility (S-) locus, haplotype:S1 Length = 309228 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 564 agctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 |||||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 281321 agctggtgagtgaaagcgaaagaatgagaatgaagaagcttgaagagct 281273
>gb|AY448016.1|AY448010S7 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR7 Length = 55205 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 564 agctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 |||||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 27298 agctggtgagtgaaagcgaaagaatgagaatgaagaagcttgaagagct 27250
>gb|AF072725.1|AF072725 Zea mays starch branching enzyme IIb (ae) gene, complete cds Length = 23449 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 243 ggtcggcgctctccgtgttcaaggccaaggaggagcagatcgagaggaagaagatggagg 302 |||||||||| || ||||||||| ||||||||| |||||||| | |||||| |||||| Sbjct: 21004 ggtcggcgctgtcgctgttcaaggagaaggaggaggagatcgagcgcaagaaggtggagg 21063 Query: 303 tcagggacaaggtgttc 319 | |||||||||||||| Sbjct: 21064 tgcgggacaaggtgttc 21080 Score = 61.9 bits (31), Expect = 4e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 572 agcgaaagcgagaggatgaggatgaagaagcttgaagagctcaacaagacg 622 ||||| ||||||||| || ||||||||||||| || ||||||||||||||| Sbjct: 21803 agcgagagcgagaggctgcggatgaagaagctggaggagctcaacaagacg 21853
>dbj|AK226504.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-81-N20 Length = 900 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 553 caggctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 ||||||||| ||| ||||| | |||||||| | |||||| ||||||||||| |||||||| Sbjct: 541 caggctaatggagttggtgggagaaagcgaaaagatgagaatgaagaagctggaagagct 600
>ref|NM_120447.2| Arabidopsis thaliana unknown protein (AT5G03660) mRNA, complete cds Length = 860 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 259 gttcaaggccaaggaggagcagatcgagaggaagaagatggaggtcag 306 |||||||||||| || ||| ||||||||| ||||||||||||| |||| Sbjct: 229 gttcaaggccaaagaagaggagatcgagaagaagaagatggagatcag 276
>ref|NM_111833.3| Arabidopsis thaliana unknown protein (AT3G09980) mRNA, complete cds Length = 926 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 553 caggctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 ||||||||| ||| ||||| | |||||||| | |||||| ||||||||||| |||||||| Sbjct: 577 caggctaatggagttggtgggagaaagcgaaaagatgagaatgaagaagctggaagagct 636
>gb|BT015482.1| Arabidopsis thaliana At5g03660 mRNA sequence Length = 519 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 259 gttcaaggccaaggaggagcagatcgagaggaagaagatggaggtcag 306 |||||||||||| || ||| ||||||||| ||||||||||||| |||| Sbjct: 135 gttcaaggccaaagaagaggagatcgagaagaagaagatggagatcag 182
>gb|AY117192.1| Arabidopsis thaliana unknown protein (At3g09980) mRNA, complete cds Length = 568 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 553 caggctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 ||||||||| ||| ||||| | |||||||| | |||||| ||||||||||| |||||||| Sbjct: 450 caggctaatggagttggtgggagaaagcgaaaagatgagaatgaagaagctggaagagct 509
>gb|AY080593.1| Arabidopsis thaliana unknown protein (At3g09980) mRNA, complete cds Length = 911 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 553 caggctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 ||||||||| ||| ||||| | |||||||| | |||||| ||||||||||| |||||||| Sbjct: 577 caggctaatggagttggtgggagaaagcgaaaagatgagaatgaagaagctggaagagct 636
>gb|BT023737.1| Arabidopsis thaliana At3g09980 gene, complete cds Length = 537 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 553 caggctaatagagctggtgagcgaaagcgagaggatgaggatgaagaagcttgaagagct 612 ||||||||| ||| ||||| | |||||||| | |||||| ||||||||||| |||||||| Sbjct: 450 caggctaatggagttggtgggagaaagcgaaaagatgagaatgaagaagctggaagagct 509
>gb|AY114621.1| Arabidopsis thaliana putative protein (At5g03660) mRNA, complete cds Length = 713 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 259 gttcaaggccaaggaggagcagatcgagaggaagaagatggaggtcag 306 |||||||||||| || ||| ||||||||| ||||||||||||| |||| Sbjct: 138 gttcaaggccaaagaagaggagatcgagaagaagaagatggagatcag 185
>gb|AY072382.1| Arabidopsis thaliana putative protein (At5g03660) mRNA, complete cds Length = 783 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 259 gttcaaggccaaggaggagcagatcgagaggaagaagatggaggtcag 306 |||||||||||| || ||| ||||||||| ||||||||||||| |||| Sbjct: 196 gttcaaggccaaagaagaggagatcgagaagaagaagatggagatcag 243
>gb|AY054234.1| Arabidopsis thaliana AT5g03660/F17C15_80 mRNA, complete cds Length = 694 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 259 gttcaaggccaaggaggagcagatcgagaggaagaagatggaggtcag 306 |||||||||||| || ||| ||||||||| ||||||||||||| |||| Sbjct: 186 gttcaaggccaaagaagaggagatcgagaagaagaagatggagatcag 233
>gb|AY088699.1| Arabidopsis thaliana clone 9220 mRNA, complete sequence Length = 751 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 259 gttcaaggccaaggaggagcagatcgagaggaagaagatggaggtcag 306 |||||||||||| || ||| ||||||||| ||||||||||||| |||| Sbjct: 229 gttcaaggccaaagaagaggagatcgagaagaagaagatggagatcag 276
>emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome 5, BAC clone F17C15 (ESSA project) Length = 102897 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 259 gttcaaggccaaggaggagcagatcgagaggaagaagatggaggtcag 306 |||||||||||| || ||| ||||||||| ||||||||||||| |||| Sbjct: 33464 gttcaaggccaaagaagaggagatcgagaagaagaagatggagatcag 33511
>gb|AC184063.2| Populus trichocarpa clone Pop1-108K13, complete sequence Length = 109018 Score = 48.1 bits (24), Expect = 0.055 Identities = 30/32 (93%) Strand = Plus / Minus Query: 589 gaggatgaagaagcttgaagagctcaacaaga 620 ||||||||||||||| |||||||| ||||||| Sbjct: 101817 gaggatgaagaagctggaagagctgaacaaga 101786
>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence Length = 180650 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 9 caagaggaagagagaattaatactgct 35 ||||||||||||||||||| ||||||| Sbjct: 61441 caagaggaagagagaattactactgct 61467
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 774519 taataataataatgttaattac 774540
>ref|XM_984738.1| PREDICTED: Mus musculus zinc finger protein 651 (Zfp651), mRNA Length = 7093 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 580 cgagaggatgaggatgaagaag 601 |||||||||||||||||||||| Sbjct: 1960 cgagaggatgaggatgaagaag 1981
>ref|XM_914267.2| PREDICTED: Mus musculus zinc finger protein 651 (Zfp651), mRNA Length = 6473 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 580 cgagaggatgaggatgaagaag 601 |||||||||||||||||||||| Sbjct: 1342 cgagaggatgaggatgaagaag 1363
>ref|XM_981733.1| PREDICTED: Mus musculus zinc finger protein 651 (Zfp651), mRNA Length = 6347 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 580 cgagaggatgaggatgaagaag 601 |||||||||||||||||||||| Sbjct: 1214 cgagaggatgaggatgaagaag 1235
>gb|AC150424.3| Branchiostoma floridae clone CH302-7J16, complete sequence Length = 154657 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 gaggcggcggaaggggaggggt 236 |||||||||||||||||||||| Sbjct: 135301 gaggcggcggaaggggaggggt 135280
>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence Length = 194427 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 580 cgagaggatgaggatgaagaag 601 |||||||||||||||||||||| Sbjct: 146065 cgagaggatgaggatgaagaag 146044
>gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete sequence Length = 160712 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 139299 taataataataatgttaattac 139320
>gb|AC007589.8| Drosophila melanogaster clone BACR20D10, complete sequence Length = 164712 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 11809 taataataataatgttaattac 11830
>gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC T22K18 genomic sequence, complete sequence Length = 96232 Score = 44.1 bits (22), Expect = 0.85 Identities = 34/38 (89%) Strand = Plus / Minus Query: 575 gaaagcgagaggatgaggatgaagaagcttgaagagct 612 |||||||| | |||||| ||||||||||| |||||||| Sbjct: 72457 gaaagcgaaaagatgagaatgaagaagctggaagagct 72420
>gb|AC090643.22| Homo sapiens 12q BAC RP11-489P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 52154 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 777 ttctttaatttttcgcctttcttctt 802 ||||||||||||| |||||||||||| Sbjct: 34825 ttctttaatttttagcctttcttctt 34850
>gb|BT003481.1| Drosophila melanogaster RE56673 full insert cDNA Length = 2186 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 2127 taataataataatgttaattac 2106
>gb|AC136759.4| Homo sapiens chromosome 11, clone RP11-114J20, complete sequence Length = 152269 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 47346 taataataataatgttaattac 47325
>emb|BX294653.11| Zebrafish DNA sequence from clone CH211-196H24 in linkage group 20, complete sequence Length = 208836 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 643 gtaataataataatgttaatta 664 |||||||||||||||||||||| Sbjct: 86878 gtaataataataatgttaatta 86899
>dbj|AP000626.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-21B22, complete sequences Length = 106316 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 87382 taataataataatgttaattac 87403
>gb|AF001309.1|AF001309 Chlamydomonas reinhardtii Mr 105,000 outer dynein arm docking complex protein (ODA3) mRNA, complete cds Length = 2975 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 tcaaggccaaggaggagcagat 282 |||||||||||||||||||||| Sbjct: 1190 tcaaggccaaggaggagcagat 1211
>emb|X53541.1|DMU1821 D. melanogaster U1-82.1 gene coding for U1b snRNA Length = 2462 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 494 taataataataatgttaattac 473
>gb|M64435.1|DRO6DHR2 D.melanogaster homolog of RAD6 (DHR6) gene, exons 2 and 3 Length = 2378 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 2230 taataataataatgttaattac 2209
>gb|M63792.1|DRO6DHR D.melanogaster homolog of RAD6 (DHR6) mRNA, complete cds Length = 2090 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaattac 665 |||||||||||||||||||||| Sbjct: 2045 taataataataatgttaattac 2024
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gcaggcgccgatgcagatggtgctg 175 |||||||||||||| |||||||||| Sbjct: 765697 gcaggcgccgatgctgatggtgctg 765673
>emb|CT832220.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA054K22, full insert sequence Length = 1198 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 317 gctctccgtgttcaaggccaa 337
>emb|CT831252.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA029A08, full insert sequence Length = 1355 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gaggcggcggaaggggagggg 235 ||||||||||||||||||||| Sbjct: 1007 gaggcggcggaaggggagggg 1027
>emb|CR855275.7| Zebrafish DNA sequence from clone DKEY-4M3 in linkage group 25, complete sequence Length = 159960 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 102874 taataataataatgttaatta 102894
>ref|NM_001055401.1| Oryza sativa (japonica cultivar-group) Os03g0131900 (Os03g0131900) mRNA, partial cds Length = 1292 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gaggcggcggaaggggagggg 235 ||||||||||||||||||||| Sbjct: 977 gaggcggcggaaggggagggg 997
>ref|NM_001053363.1| Oryza sativa (japonica cultivar-group) Os02g0469600 (Os02g0469600) mRNA, complete cds Length = 1523 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 254 gctctccgtgttcaaggccaa 274
>tpe|BN000093.1|HVA000093 TPA_exp: Hordeum vulgare mRNA for putative cysteine proteinase precursor (sf42 gene) Length = 1438 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 245 gctctccgtgttcaaggccaa 265
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 gcaggcgccgatgcagatggtgctg 175 |||||||||||||| |||||||||| Sbjct: 1715424 gcaggcgccgatgctgatggtgctg 1715448
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gaggcggcggaaggggagggg 235 ||||||||||||||||||||| Sbjct: 23170 gaggcggcggaaggggagggg 23150
>ref|XM_633708.1| Dictyostelium discoideum AX4 phosphoribosylaminoimidazole carboxylase (AIR carboxylase) (purC/E) mRNA, complete cds Length = 2994 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 643 gtaataataataatgttaatt 663 ||||||||||||||||||||| Sbjct: 1043 gtaataataataatgttaatt 1063
>gb|AY023514.1| Oryza sativa microsatellite MRG5839 containing (TCT)X17, genomic sequence Length = 251 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 gaggagcagatcgagaggaagaaga 296 |||||| |||||||||||||||||| Sbjct: 170 gaggaggagatcgagaggaagaaga 146
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08, complete sequence Length = 133090 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gaggcggcggaaggggagggg 235 ||||||||||||||||||||| Sbjct: 36831 gaggcggcggaaggggagggg 36851
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 gaggagcagatcgagaggaagaaga 296 |||||| |||||||||||||||||| Sbjct: 14512381 gaggaggagatcgagaggaagaaga 14512405
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ctcggacgcgtcgaggaggag 346 ||||||||||||||||||||| Sbjct: 1691307 ctcggacgcgtcgaggaggag 1691287 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gaggcggcggaaggggagggg 235 ||||||||||||||||||||| Sbjct: 1797529 gaggcggcggaaggggagggg 1797509
>gb|AC068388.7| Homo sapiens chromosome 3, clone RP11-296M9, complete sequence Length = 148372 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 798 ttcttgcttgtgattgcgttg 818 ||||||||||||||||||||| Sbjct: 53238 ttcttgcttgtgattgcgttg 53258
>emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chromosome 6 Contains a proteasome subunit alpha type 4 (PROS29) pseudogene, complete sequence Length = 170095 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 aagaggaagagagaattaata 30 ||||||||||||||||||||| Sbjct: 145605 aagaggaagagagaattaata 145585
>emb|AL135933.11| Human DNA sequence from clone RP4-774E4 on chromosome 11p13-14.2 Contains a pseudogene similar to ribosomal protein L7a, STSs and GSSs, complete sequence Length = 111135 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 798 ttcttgcttgtgattgcgttg 818 ||||||||||||||||||||| Sbjct: 25678 ttcttgcttgtgattgcgttg 25698
>gb|AC140486.4| Mus musculus BAC clone RP24-134B9 from chromosome 3, complete sequence Length = 166094 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 82881 taataataataatgttaatta 82861
>emb|BX927204.6| Zebrafish DNA sequence from clone CH211-103B12 in linkage group 23, complete sequence Length = 165759 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 gcagatcgagaggaagaagatggag 301 ||||||||||||||||| ||||||| Sbjct: 27361 gcagatcgagaggaagatgatggag 27385
>emb|BX511298.10| Zebrafish DNA sequence from clone DKEY-210E13 in linkage group 4, complete sequence Length = 217817 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 15927 taataataataatgttaatta 15907
>emb|BX255881.9| Zebrafish DNA sequence from clone CH211-268E23 in linkage group 20, complete sequence Length = 163427 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 56120 taataataataatgttaatta 56100
>gb|AC126321.1| Polypterus bichir, clone -22F22, complete sequence Length = 151602 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 21756 taataataataatgttaatta 21776
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 gaggagcagatcgagaggaagaaga 296 |||||| |||||||||||||||||| Sbjct: 10670 gaggaggagatcgagaggaagaaga 10694
>dbj|AP004852.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1371_D04 Length = 105468 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 22562 gctctccgtgttcaaggccaa 22582
>dbj|AK119670.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H07, full insert sequence Length = 1523 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 254 gctctccgtgttcaaggccaa 274
>emb|BX571973.15| Zebrafish DNA sequence from clone DKEY-254A11 in linkage group 22, complete sequence Length = 214325 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 52167 taataataataatgttaatta 52187 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 52453 taataataataatgttaatta 52473 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 52761 taataataataatgttaatta 52781
>emb|BX571776.5| Zebrafish DNA sequence from clone CH211-139K15 in linkage group 23, complete sequence Length = 160455 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 277 gcagatcgagaggaagaagatggag 301 ||||||||||||||||| ||||||| Sbjct: 150654 gcagatcgagaggaagatgatggag 150678
>dbj|AK099900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114D14, full insert sequence Length = 1293 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gaggcggcggaaggggagggg 235 ||||||||||||||||||||| Sbjct: 978 gaggcggcggaaggggagggg 998
>dbj|AK099269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020I09, full insert sequence Length = 1385 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 256 gctctccgtgttcaaggccaa 276
>dbj|AK098908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F17, full insert sequence Length = 1480 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 256 gctctccgtgttcaaggccaa 276
>dbj|AK071907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063O07, full insert sequence Length = 1486 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 262 gctctccgtgttcaaggccaa 282
>dbj|AK061947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E05, full insert sequence Length = 1504 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gctctccgtgttcaaggccaa 270 ||||||||||||||||||||| Sbjct: 258 gctctccgtgttcaaggccaa 278
>gb|AY788611.1| Anthanassa drusilla voucher NW76-7 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1450 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 taataataataatgttaatta 664 ||||||||||||||||||||| Sbjct: 1322 taataataataatgttaatta 1342
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ctcggacgcgtcgaggaggag 346 ||||||||||||||||||||| Sbjct: 103772 ctcggacgcgtcgaggaggag 103752 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 148,413,147 Number of extensions: 10141760 Number of successful extensions: 277531 Number of sequences better than 10.0: 82 Number of HSP's gapped: 277523 Number of HSP's successfully gapped: 116 Length of query: 893 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 870 Effective length of database: 18,503,978,556 Effective search space: 16098461343720 Effective search space used: 16098461343720 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)