| Clone Name | FLbaf31h08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109444:Os05g0347000 | 268 | 4e-72 | 2 | Os01g0648500:Os01g0648500 | 139 | 3e-33 | 3 | AK099819:Os06g0186600 | 31 | 1.1 | 4 | AK110015: | 30 | 2.4 | 5 | AK111515:Os03g0403400 | 29 | 4.1 | 6 | AK073971:Os03g0218200 | 28 | 6.9 | 7 | AK110103: | 28 | 9.1 |
|---|
>AK109444:Os05g0347000 | Length = 200 Score = 268 bits (684), Expect = 4e-72 Identities = 139/184 (75%), Positives = 154/184 (83%), Gaps = 2/184 (1%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSS-NPDDASLDLSFSEDGRSGTFMIGNQRFPA 181 M+EQFILRVPPSVAERIERLM+ESAA SSS NP+DASLDLSFSEDGR+GTFMIGN+ FPA Sbjct: 1 MEEQFILRVPPSVAERIERLMNESAAASSSSNPEDASLDLSFSEDGRNGTFMIGNESFPA 60 Query: 182 SLLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAPEGVEYKHGLTPPMXXXXXXX 361 SLLDLPTVVESYKTYDDS L+KTAD+GQM+MVREE+DPAPEGVEYKHGLTPPM Sbjct: 61 SLLDLPTVVESYKTYDDSVLIKTADIGQMIMVREEEDPAPEGVEYKHGLTPPMRDARRRR 120 Query: 362 XXXEPDLSAELVHRVEKDLMSIMQGVPVNQNASAAGR-GEGGDRXXXXXXXXXXXDVQEP 538 EPDL+AELVHRVEKDL+SIM GV +NQNASA R GEGGDR +V++P Sbjct: 121 FRREPDLNAELVHRVEKDLISIMHGVSINQNASAILRAGEGGDRKKAGPAPATKPNVKQP 180 Query: 539 AANG 550 AANG Sbjct: 181 AANG 184
>Os01g0648500:Os01g0648500 | Length = 193 Score = 139 bits (349), Expect = 3e-33 Identities = 66/96 (68%), Positives = 75/96 (78%) Frame = +2 Query: 98 PDDASLDLSFSEDGRSGTFMIGNQRFPASLLDLPTVVESYKTYDDSFLVKTADVGQMVMV 277 P + D EDGRSGTFMIGN+ FPASLLDLPTV+ESYKTY+DS L+KTAD+GQM+MV Sbjct: 59 PPASIFDSRCFEDGRSGTFMIGNESFPASLLDLPTVMESYKTYNDSVLIKTADIGQMIMV 118 Query: 278 REEDDPAPEGVEYKHGLTPPMXXXXXXXXXXEPDLS 385 REEDDPAPEG+EY HGLTPPM EPDL+ Sbjct: 119 REEDDPAPEGIEYTHGLTPPMRDARRRRFRREPDLN 154
>AK099819:Os06g0186600 | Length = 472 Score = 30.8 bits (68), Expect = 1.1 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 6/66 (9%) Frame = +2 Query: 23 LRVPPSVAERIERLMSE--SAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQ----RFPAS 184 LR PS+ + I+ +S+ S AG SS DD S + +D +SGT G + FPA+ Sbjct: 16 LRKSPSLLDLIQMRLSQANSTAGQSS-ADDCSSEPPKKKDLKSGTSTAGERLKASNFPAN 74 Query: 185 LLDLPT 202 +L + T Sbjct: 75 ILRIGT 80
>AK110015: | Length = 840 Score = 29.6 bits (65), Expect = 2.4 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Frame = +2 Query: 26 RVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPASLLDLPTV 205 + P A ++E+AA + +P S+D D + T M PA PT Sbjct: 418 QAPAPAAPSSAAPLAEAAAEPTDSPSPMSMDSPSPTDRQEPTPMDQEMHPPAPAAGDPTT 477 Query: 206 VESYKTYDDSFL----VKTADVGQMVMV 277 + YD S L VK AD+G V Sbjct: 478 LPPPPPYDPSSLERITVKIADLGNACWV 505
>AK111515:Os03g0403400 | Length = 744 Score = 28.9 bits (63), Expect = 4.1 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +2 Query: 17 FILRVP-PSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPASLLD 193 F++R P+V R+ R ++S AG ++P FS DGRS A + Sbjct: 593 FLVRASDPTVVVRVVR-SADSVAGHVNHP-------VFSPDGRSIAVTADLAAVSADPIS 644 Query: 194 LPTVVESYKTYDDSFLV 244 LP + S + Y D F V Sbjct: 645 LPLFLHSVRPYGDIFTV 661
>AK073971:Os03g0218200 | Length = 217 Score = 28.1 bits (61), Expect = 6.9 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -1 Query: 487 ITAFTTSSCTSILVDRHSLHNTHKILLNSVNKLCTQVRLSAKTSPACIP 341 IT F+ + + L+ H + NT + +++ LCTQ+R S C+P Sbjct: 128 ITGFSATRSLAELIC-HIMENTTSLECLTLDTLCTQLRCSDGNIDVCLP 175
>AK110103: | Length = 989 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 99 GLEDEPAADSLIRRSIRSATDGGTRRMNC 13 G+ + D RR + +AT+GG RR+ C Sbjct: 300 GMVVKEVVDVRFRRELHAATNGGDRRLTC 328 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,879,771 Number of extensions: 357643 Number of successful extensions: 992 Number of sequences better than 10.0: 7 Number of HSP's gapped: 990 Number of HSP's successfully gapped: 7 Length of query: 255 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 157 Effective length of database: 11,475,837 Effective search space: 1801706409 Effective search space used: 1801706409 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)