>LOC_Os05g28010:12005.t02452:unspliced-genomic transcription initiation factor TFIID subunit 7, putative, expressed|
Length = 2765
Score = 99.6 bits (211), Expect(6) = 2e-65
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = +2 / +1
Query: 131 EDGRSGTFMIGNQRFPASLLDLPTVVESYKTYDDSFLVKTADVGQM 268
EDGR+GTFMIGN+ FPASLLDLPTVVESYKTYDDS L+KTAD+GQ+
Sbjct: 1168 EDGRNGTFMIGNESFPASLLDLPTVVESYKTYDDSVLIKTADIGQV 1305
Score = 71.6 bits (150), Expect(6) = 2e-65
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2 / +1
Query: 263 QMVMVREEDDPAPEGVEYKHGLTPPMXXXXXXXXXXEPDLS 385
QM+MVREE+DPAPEGVEYKHGLTPPM EPDL+
Sbjct: 1378 QMIMVREEEDPAPEGVEYKHGLTPPMRDARRRRFRREPDLN 1500
Score = 62.5 bits (130), Expect(6) = 2e-65
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +2 / +3
Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSN 97
M+EQFILRVPPSVAERIERLM+ESAA SSS+
Sbjct: 216 MEEQFILRVPPSVAERIERLMNESAAASSSS 308
Score = 42.3 bits (86), Expect(6) = 2e-65
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +3 / +3
Query: 477 KAVIARKLHQLLYPSLTFKSLLQMAKKLTLIGATLMS 587
K I RK QL P+L +LLQMAKKL G TLMS
Sbjct: 2271 KVAIVRKRDQLQQPNLMSNNLLQMAKKLRQRGVTLMS 2381
Score = 40.0 bits (81), Expect(6) = 2e-65
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2 / +3
Query: 386 AELVHRVEKDLMSIMQGVPVN 448
AELVHRVEKDL+SIM GV ++
Sbjct: 1596 AELVHRVEKDLISIMHGVSIS 1658
Score = 38.6 bits (78), Expect(6) = 2e-65
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 74 SAAGSSSNPDDASLDLSFS 130
+AA SSSNP+DASLDLSFS
Sbjct: 288 AAASSSSNPEDASLDLSFS 344
Score = 89.5 bits (189), Expect(5) = 6e-59
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -1 / -3
Query: 382 QVRLSAKTSPACIPHWRSKSMLVFNSFWSRIIFFSYHYHL 263
Q+RL A+T PAC+PHWRSK+MLVFNSFWSRI FFSYH HL
Sbjct: 1497 QIRLPAETPPACVPHWRSKTMLVFNSFWSRIFFFSYHNHL 1378
Score = 72.1 bits (151), Expect(5) = 6e-59
Identities = 30/40 (75%), Positives = 32/40 (80%)
Frame = -3 / -2
Query: 248 F*LKRNHHMSYMTPQRLGDPREMQETSGYQS*MCHSFHPL 129
F*L NHHMS MTPQ+LGDPR MQE+ QS*MCH FHPL
Sbjct: 1285 F*LALNHHMSCMTPQQLGDPRVMQESFHSQS*MCHFFHPL 1166
Score = 59.7 bits (124), Expect(5) = 6e-59
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -2 / -2
Query: 93 EDEPAADSLIRRSIRSATDGGTRRMNCSSM 4
E+E AADS +RRSIRSAT+GGTRRMNCSS+
Sbjct: 304 EEEAAADSFMRRSIRSATEGGTRRMNCSSI 215
Score = 56.1 bits (116), Expect(5) = 6e-59
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1 / -2
Query: 586 LIRVAPISVSFFAICSRLLNVRLGYRSWCSFLAITAFT 473
LIRV P+ +SFFAICSRL ++R G SW FL I F+
Sbjct: 2380 LIRVTPLCLSFFAICSRLFDIRFGCWSWSRFLTIATFS 2267
Score = 36.3 bits (73), Expect(5) = 6e-59
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -1 / -1
Query: 445 DRHSLHNTHKILLNSVNKLCTQVRLSA 365
DR+ +HNT++ILLNSVNK R+ +
Sbjct: 1655 DRYPMHNTNEILLNSVNKFGLHKRVKS 1575
Score = 76.2 bits (160), Expect(6) = 9e-41
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1 / +3
Query: 133 GWKEWHIYDW*PEVSCISLGSPNRCGVI*DI**FLFS*NC*CWS 264
GWK+WHIYDW ++SCI+LGSPN CGVI DI**F +*N * WS
Sbjct: 1170 GWKKWHIYDWE*KLSCITLGSPNCCGVIQDI**FSAN*NS*YWS 1301
Score = 62.9 bits (131), Expect(6) = 9e-41
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3 / +2
Query: 273 W*EKKMILLQKELNTSMDLLLQ*GMHAGDVFAESLT*VQSL 395
W*EKK ILLQKELNTSM LLLQ*G HAG V A SL *+ S+
Sbjct: 1388 W*EKKKILLQKELNTSMVLLLQ*GTHAGGVSAGSLI*MYSV 1510
Score = 44.1 bits (90), Expect(6) = 9e-41
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1 / +2
Query: 1 GHGRAVHPPRAPIRGGADRASYERI 75
G G AVHPP +P+R GADRA +ERI
Sbjct: 212 GDGGAVHPPGSPLRRGADRAPHERI 286
Score = 30.9 bits (61), Expect(6) = 9e-41
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 388 RACSPS*EGSYEYYA 432
R CSPS*EGS+ YYA
Sbjct: 1598 RTCSPS*EGSH*YYA 1642
Score = 29.5 bits (58), Expect(6) = 9e-41
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2 / +2
Query: 473 GEGGDRXXXXXXXXXXXDVQEPAANG 550
GEGGDR +V++PAANG
Sbjct: 2267 GEGGDRKKAGPAPATKPNVKQPAANG 2344
Score = 25.8 bits (50), Expect(6) = 9e-41
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 538 CCKWRRS*R**ERL**V 588
CCKWRRS* E L**V
Sbjct: 2332 CCKWRRS*GREE*L**V 2382
Score = 80.3 bits (169), Expect(4) = 1e-34
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = -1 / -3
Query: 295 RIIFFSYHYHLTNISSFN*KGIIICLI*LHNGWEIQERCRKPLVTNHKCATPSIL 131
+I++ +LTNIS FN* IIICL+*LHN WEIQE CRK + NHKCA SIL
Sbjct: 1332 QILYTKPMLYLTNISCFN*H*IIICLV*LHNSWEIQE*CRKAFIPNHKCAISSIL 1168
Score = 50.6 bits (104), Expect(4) = 1e-34
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -3 / -2
Query: 401 GEQALHSSQALCENVACVHPSLEE*VHACI 312
G +HS+QA C N ACV PSLEE* HACI
Sbjct: 1516 GRHRIHSNQAPCGNAACVRPSLEE*DHACI 1427
Score = 45.5 bits (93), Expect(4) = 1e-34
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 82 GGRFAHKTLDPLRHGWGHAEDELLVH 5
GG F H+ LDPLR G G+ EDELL+H
Sbjct: 293 GGGFVHEALDPLRDGGGNPEDELLLH 216
Score = 35.4 bits (71), Expect(4) = 1e-34
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 447 LTGTPCIILIRSFSTR*T 394
L TPCIIL+RSFSTR*T
Sbjct: 1657 LIDTPCIILMRSFSTR*T 1604
Score = 71.2 bits (149), Expect(4) = 4e-26
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = +3 / +2
Query: 132 RMEGVAHL*LVTRGFLHLSWISQPLWSHIRHMMIPF*LKLLMLVR 266
RME +AHL*L + FLH SWISQ LWSH RHMMI *LK L+LVR
Sbjct: 1169 RMEEMAHL*LGMKAFLHHSWISQLLWSHTRHMMIQC*LKQLILVR 1303
Score = 51.5 bits (106), Expect(4) = 4e-26
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = +1 / +3
Query: 262 SDGNGKXXXXXXXXXXXIQAWTYSSNEGCTQATFSQRA*LECRACSP 402
+D GK IQAW+YSSNEG TQA F Q A* EC C P
Sbjct: 1377 TDDYGKRRRRSCSRRS*IQAWSYSSNEGRTQAAFPQGA*FECILCLP 1517
Score = 32.7 bits (65), Expect(4) = 4e-26
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 6 WTSSSSSACPHPWRSGSSVL*AN 74
W SSSSS P P RSGSS * N
Sbjct: 217 WRSSSSSGFPPPSRSGSSAS*TN 285
Score = 27.2 bits (53), Expect(4) = 4e-26
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 390 SLFTELRRIL*VLCKECLS 446
+LFTELRRI VLC LS
Sbjct: 1600 NLFTELRRISLVLCMGYLS 1656
Score = 68.9 bits (144), Expect(4) = 1e-16
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2 / -1
Query: 249 VLTKKESSYVLYDSTTVGRSKRDAGNLWLPIINVPLLP 136
VL ESSYVLYDSTTVGRSK DAG L PIINVP LP
Sbjct: 1286 VLISTESSYVLYDSTTVGRSKSDAGKLSFPIINVPFLP 1173
Score = 30.4 bits (60), Expect(4) = 1e-16
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -3 / -3
Query: 68 S*DARSAPPRMGARGG*TARP 6
S* ARSAP R G GG*TA P
Sbjct: 279 S*GARSAPRRRGEPGG*TAPP 217
Score = 26.3 bits (51), Expect(4) = 1e-16
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 431 A*YS*DPSQLGEQ 393
A*Y *DPSQLGEQ
Sbjct: 1641 A*Y**DPSQLGEQ 1603
Score = 24.0 bits (46), Expect(4) = 1e-16
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 339 IGGVSPCLY 313
IGGV PCLY
Sbjct: 1454 IGGVRPCLY 1428
>LOC_Os01g46020:12001.t04054:unspliced-genomic TAFII55 protein conserved region containing protein, expressed|
Length = 2676
Score = 97.7 bits (207), Expect(7) = 7e-64
Identities = 38/47 (80%), Positives = 45/47 (95%)
Frame = +2 / +2
Query: 128 SEDGRSGTFMIGNQRFPASLLDLPTVVESYKTYDDSFLVKTADVGQM 268
+EDGRSGTFMIGN+ FPASLLDLPTV+ESYKTY+DS L+KTAD+GQ+
Sbjct: 1202 TEDGRSGTFMIGNESFPASLLDLPTVMESYKTYNDSVLIKTADIGQV 1342
Score = 70.7 bits (148), Expect(7) = 7e-64
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = +2 / +1
Query: 248 TADVGQMVMVREEDDPAPEGVEYKHGLTPPMXXXXXXXXXXEPDLS 385
T + QM+MVREEDDPAPEG+EY HGLTPPM EPDL+
Sbjct: 1399 TLSL*QMIMVREEDDPAPEGIEYTHGLTPPMRDARRRRFRREPDLN 1536
Score = 65.7 bits (137), Expect(7) = 7e-64
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2 / +3
Query: 35 PSVAERIERLMSESAAGSSSNPDDASLDLSFSED 136
PSVAERIERLM+++A SSSNPDDASLDLSFS D
Sbjct: 123 PSVAERIERLMNQAAGASSSNPDDASLDLSFSGD 224
Score = 40.5 bits (82), Expect(7) = 7e-64
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +3 / +2
Query: 486 IARKLHQLLYPSLTFKSLLQMAKKLTLIGATLMS 587
+ARKLH L PS+ F LQ KKL G TLMS
Sbjct: 2201 VARKLHLLQQPSVMFNDPLQTVKKLRQRGVTLMS 2302
Score = 39.6 bits (80), Expect(7) = 7e-64
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 380 LSAELVHRVEKDLMSIMQGVPVN 448
L AELVHRVEK LM+IM GV V+
Sbjct: 1614 LQAELVHRVEKHLMNIMHGVSVS 1682
Score = 26.3 bits (51), Expect(7) = 7e-64
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 5 MDEQFILRVPP 37
M++QFILRVPP
Sbjct: 94 MEQQFILRVPP 126
Score = 26.3 bits (51), Expect(7) = 7e-64
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 443 VNQNASAAGRGEGGDR 490
++QNAS G GEGG +
Sbjct: 2164 IDQNASVIGAGEGGKK 2211
Score = 86.3 bits (182), Expect(7) = 1e-56
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -1 / -1
Query: 379 VRLSAKTSPACIPHWRSKSMLVFNSFWSRIIFFSYHYHL 263
VRLS +T P+CIPHWRSK+M VFNSFWSRIIFFSYH HL
Sbjct: 1530 VRLSPETPPSCIPHWRSKTMCVFNSFWSRIIFFSYHNHL 1414
Score = 80.3 bits (169), Expect(7) = 1e-56
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1 / -3
Query: 271 YHLTNISSFN*KGIIICLI*LHNGWEIQERCRKPLVTNHKCATPSIL 131
++LTNIS FN* II+CL+*LHN WEI ERC K ++NHKCAT SIL
Sbjct: 1345 FYLTNISCFN*H*IIVCLV*LHNSWEI*ERCWKAFISNHKCATSSIL 1205
Score = 50.6 bits (104), Expect(7) = 1e-56
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -1 / -1
Query: 589 RLIRVAPISVSFFAICSRLLNVRLGYRSWCSFLA 488
RLIRV P+ +SFF +CS LN+ LG S CSFLA
Sbjct: 2304 RLIRVTPLCLSFFTVCSGSLNITLGCWSRCSFLA 2203
Score = 37.7 bits (76), Expect(7) = 1e-56
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -1 / -2
Query: 445 DRHSLHNTHKILLNSVNKLC 386
DR+S+HN H++L NSVN+ C
Sbjct: 1679 DRYSMHNIHEMLFNSVNQFC 1620
Score = 32.7 bits (65), Expect(7) = 1e-56
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 99 GLEDEPAADSLIRRSIRSATDG 34
GLED+ A +RRSIRSAT+G
Sbjct: 187 GLEDDAPAAWFMRRSIRSATEG 122
Score = 27.2 bits (53), Expect(7) = 1e-56
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 651 IHWVCSAN*SCTVYSGP 601
++WVCS N S +YS P
Sbjct: 2374 VNWVCSGNWSRIIYSTP 2324
Score = 26.7 bits (52), Expect(7) = 1e-56
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 36 GGTRRMNCSSMA 1
GGTRRMNC S++
Sbjct: 125 GGTRRMNCCSIS 90
Score = 68.4 bits (143), Expect(5) = 3e-30
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 273 W*EKKMILLQKELNTSMDLLLQ*GMHAGDVFAESLT*VQSL 395
W*EKKMILLQKELNT M LLLQ*GMH G V ESLT*+ S+
Sbjct: 1424 W*EKKMILLQKELNTHMVLLLQ*GMHEGGVSGESLT*MYSM 1546
Score = 66.1 bits (138), Expect(5) = 3e-30
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +3 / +3
Query: 129 QRMEGVAHL*LVTRGFLHLSWISQPLWSHIRHMMIPF*LKLLMLVR 266
QRME VAHL*L + F HLS ISQ LWSH RH MI *LK L+LVR
Sbjct: 1203 QRMEEVAHL*LEMKAFQHLS*ISQLLWSHTRHTMIQC*LKQLILVR 1340
Score = 31.3 bits (62), Expect(5) = 3e-30
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 388 RACSPS*EGSYEYYARSACQ 447
R SPS*+ S+EYYA S CQ
Sbjct: 1622 RTGSPS*KASHEYYAWSICQ 1681
Score = 24.9 bits (48), Expect(5) = 3e-30
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 6 WTSSSSSACP 35
W+SSSSS CP
Sbjct: 95 WSSSSSSVCP 124
Score = 24.4 bits (47), Expect(5) = 3e-30
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 34 PIRGGADRASYE 69
P+RGGADR +E
Sbjct: 122 PLRGGADRTPHE 157
Score = 68.0 bits (142), Expect(5) = 5e-25
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2 / -1
Query: 249 VLTKKESSYVLYDSTTVGRSKRDAGNLWLPIINVPLLP 136
VL ES YVLYDS TVGRSKRDAG L PIINVPLLP
Sbjct: 1323 VLISTESLYVLYDSITVGRSKRDAGKLSFPIINVPLLP 1210
Score = 43.2 bits (88), Expect(5) = 5e-25
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -3 / -3
Query: 401 GEQALHSSQALCENVACVHPSLEE*VHACI 312
G +H SQAL N A VHPSLEE* H CI
Sbjct: 1552 GRH*IHLSQALSGNAAFVHPSLEE*DHVCI 1463
Score = 34.1 bits (68), Expect(5) = 5e-25
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 447 LTGTPCIILIRSFSTR*T 394
LT TPCII +R FSTR*T
Sbjct: 1681 LTDTPCIIFMRCFSTR*T 1628
Score = 27.2 bits (53), Expect(5) = 5e-25
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1 / -2
Query: 79 GRFAHKTLDPLRHGWG 32
G H+ DPLRHG G
Sbjct: 167 GGLVHEAFDPLRHGGG 120
Score = 24.4 bits (47), Expect(5) = 5e-25
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 34 GHAEDELLVH 5
GH EDELL+H
Sbjct: 123 GHTEDELLLH 94
Score = 62.0 bits (129), Expect(4) = 5e-21
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 133 GWKEWHIYDW*PEVSCISLGSPNRCGVI*DI**FLFS*NC*CWS 264
GWK+WHIYDW ++S ISL SPN GVI DI *F +*N * WS
Sbjct: 1207 GWKKWHIYDWK*KLSSISLRSPNCYGVIQDIQ*FSAN*NS*YWS 1338
Score = 52.4 bits (108), Expect(4) = 5e-21
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 313 IQAWTYSSNEGCTQATFSQRA*LECRACSP 402
I W+YSSNEGCT+A F +RA*L+C C P
Sbjct: 1464 IHTWSYSSNEGCTKAAFPERA*LKCIQCLP 1553
Score = 27.6 bits (54), Expect(4) = 5e-21
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3 / +1
Query: 387 QSLFTELRRIL*VLCKECLS 446
Q+ FTEL+ I *+LC E LS
Sbjct: 1621 QNWFTELKSIS*ILCMEYLS 1680
Score = 22.6 bits (43), Expect(4) = 5e-21
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 33 PHPWRSGSS 59
P PWRSGS+
Sbjct: 121 PPPWRSGSN 147
Score = 60.6 bits (126), Expect(4) = 3e-11
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 248 F*LKRNHHMSYMTPQRLGDPREMQETSGYQS*MCHSFHPL 129
F*L NH MS MTP +LGD REM E+ +QS*MCH FHPL
Sbjct: 1322 F*LALNHCMSCMTP*QLGDLREMLESFHFQS*MCHFFHPL 1203
Score = 25.4 bits (49), Expect(4) = 3e-11
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / -1
Query: 446 *QALLA*YS*DPSQLGEQAL 387
*Q L A*YS*D QLGE L
Sbjct: 1680 *QILHA*YS*DAFQLGEPVL 1621
Score = 22.6 bits (43), Expect(4) = 3e-11
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / -2
Query: 339 IGGVSPCLY 313
IGGV PC+Y
Sbjct: 1490 IGGVRPCVY 1464
Score = 21.7 bits (41), Expect(4) = 3e-11
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -1
Query: 68 S*DARSAPPRMG 33
S* RSAPPR G
Sbjct: 156 S*GVRSAPPRRG 121
>LOC_Os01g10490:12001.t00923:unspliced-genomic meiosis 5, putative, expressed|
Length = 1374
Score = 31.3 bits (62), Expect = 8.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 355 PACIPHWRSKSMLVFNSFWSRII 287
P +P WR L F++FW R++
Sbjct: 490 PGAVPRWRRLRELPFHAFWRRLL 558
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 268,280,740
Number of extensions: 3761445
Number of successful extensions: 16789
Number of sequences better than 10.0: 16
Length of query: 255
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 206
Effective length of database: 52,856,264
Effective search space: 10888390384
Effective search space used: 10888390384
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)