ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31h08 |
|---|---|
| Clone Library Name | barley_pub |
>Q9VHY5:TAF7_DROME Transcription initiation factor TFIID subunit 7 - Drosophila| melanogaster (Fruit fly) Length = 479 Score = 61.6 bits (148), Expect = 3e-09 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPAS 184 ++ QFI+RVP +A+ + ++ AG+ + L + D R G I +Q Sbjct: 55 LESQFIMRVPKELADTVHEAIN---AGTIKD----RLTIQLDPDLRYGEVRIDDQILYTK 107 Query: 185 LLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPA-------------PEGVEYK-- 319 L+DLPTVVESYKT D+ K+AD+ Q+++ +EE + P V+ K Sbjct: 108 LVDLPTVVESYKTIDNKSFYKSADICQILICKEEREDETEKESPNKNKKKDPNKVDKKYL 167 Query: 320 --HGLTPP 337 HG+TPP Sbjct: 168 FPHGITPP 175
>Q9R1C0:TAF7_MOUSE Transcription initiation factor TFIID subunit 7 - Mus musculus| (Mouse) Length = 341 Score = 60.5 bits (145), Expect = 7e-09 Identities = 36/99 (36%), Positives = 51/99 (51%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPAS 184 ++ QFILR+PP A + R + +G + D S++L DGR G + A Sbjct: 12 LESQFILRLPPEYAATVRRAVQ---SGHVNLKDKLSIELH--PDGRHGIVRVDRVPLAAK 66 Query: 185 LLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAP 301 L+DLP V ES KT D KTAD+ QM++ + D P Sbjct: 67 LVDLPCVTESLKTIDKKTFYKTADISQMLVATVDGDLYP 105
>Q2HJG8:TAF7_BOVIN Transcription initiation factor TFIID subunit 7 - Bos taurus| (Bovine) Length = 349 Score = 59.3 bits (142), Expect = 2e-08 Identities = 37/99 (37%), Positives = 52/99 (52%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPAS 184 ++ QFILR+PP A + R + +G + D S++L DGR G + A Sbjct: 12 LESQFILRLPPEYASTVRRAVQ---SGHVNLKDRLSIELH--PDGRHGIVRVDRVPLAAK 66 Query: 185 LLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAP 301 L+DLP V+ES KT D KTADV QM++ + D P Sbjct: 67 LVDLPRVMESLKTIDKKTFYKTADVCQMLVSTVDGDLYP 105
>Q6R1L1:TAF7_CRIGR Transcription initiation factor TFIID subunit 7 - Cricetulus| griseus (Chinese hamster) Length = 341 Score = 57.8 bits (138), Expect = 5e-08 Identities = 35/99 (35%), Positives = 52/99 (52%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPAS 184 ++ QFILR+PP A + R + +G + D +++L DGR G + A Sbjct: 12 LESQFILRLPPEYASTVRRAVQ---SGHVNLKDRLTIELH--PDGRHGIVRVDRVPLAAK 66 Query: 185 LLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAP 301 L+DLP V+ES KT D KTAD+ QM++ + D P Sbjct: 67 LVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYP 105
>Q5R7L9:TAF7_PONPY Transcription initiation factor TFIID subunit 7 - Pongo pygmaeus| (Orangutan) Length = 349 Score = 56.6 bits (135), Expect = 1e-07 Identities = 34/99 (34%), Positives = 52/99 (52%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPAS 184 ++ QFILR+PP A + R + +G + D +++L DGR G + + Sbjct: 12 LESQFILRLPPEYASTVRRAVQ---SGHVNLKDRLTIELH--PDGRHGIVRVDRVPLASK 66 Query: 185 LLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAP 301 L+DLP V+ES KT D KTAD+ QM++ + D P Sbjct: 67 LVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYP 105
>Q4R5A5:TAF7_MACFA Transcription initiation factor TFIID subunit 7 - Macaca| fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 349 Score = 56.6 bits (135), Expect = 1e-07 Identities = 34/99 (34%), Positives = 52/99 (52%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPAS 184 ++ QFILR+PP A + R + +G + D +++L DGR G + + Sbjct: 12 LESQFILRLPPEYASTVRRAVQ---SGHVNLKDRLTIELH--PDGRHGIVRVDRVPLASK 66 Query: 185 LLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAP 301 L+DLP V+ES KT D KTAD+ QM++ + D P Sbjct: 67 LVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYP 105
>Q15545:TAF7_HUMAN Transcription initiation factor TFIID subunit 7 - Homo sapiens| (Human) Length = 349 Score = 56.6 bits (135), Expect = 1e-07 Identities = 34/99 (34%), Positives = 52/99 (52%) Frame = +2 Query: 5 MDEQFILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPAS 184 ++ QFILR+PP A + R + +G + D +++L DGR G + + Sbjct: 12 LESQFILRLPPEYASTVRRAVQ---SGHVNLKDRLTIELH--PDGRHGIVRVDRVPLASK 66 Query: 185 LLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAP 301 L+DLP V+ES KT D KTAD+ QM++ + D P Sbjct: 67 LVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYP 105
>O13701:TAF7_SCHPO Transcription initiation factor TFIID subunit 7 -| Schizosaccharomyces pombe (Fission yeast) Length = 393 Score = 52.0 bits (123), Expect = 3e-06 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 10/122 (8%) Frame = +2 Query: 5 MDEQFILRVPPSV-AERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPA 181 ++EQ ILR+PP E + + + G A + + F +D R + + A Sbjct: 72 IEEQIILRLPPGEDCEYVRKAIENREVGRG-----ADIWVKF-KDQRRAVVHVNGHLYAA 125 Query: 182 SLLDLPTVVESYKTYDDSFLVKTADVGQMVMVREEDDPAPEGVE---------YKHGLTP 334 L+DLP ++ES K++D + K AD+ QM++ E + + Y HGLT Sbjct: 126 KLVDLPCIIESNKSFDKKVIFKAADICQMLIATERIEHENSVLNTQLKQADYIYPHGLTT 185 Query: 335 PM 340 PM Sbjct: 186 PM 187
>Q05021:TAF7_YEAST Transcription initiation factor TFIID subunit 7 - Saccharomyces| cerevisiae (Baker's yeast) Length = 590 Score = 40.8 bits (94), Expect = 0.006 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 10/111 (9%) Frame = +2 Query: 20 ILRVPPSVAERIERLMSESAAGSSSNPDDASLDLSFSEDGRSGTFMIGNQRFPASLLDLP 199 ILR+ P + E S + D + + + + + R I + + A L+DLP Sbjct: 117 ILRILPDI-------QLEFVKNSLESGDYSGISIKWKNE-RHAVVTINDVMYGAILVDLP 168 Query: 200 TVVESYKTYDDSFLVKTADVGQMVM----VREEDD------PAPEGVEYKH 322 TV+E K+ D L+KT DV QM++ ++EE++ P E + KH Sbjct: 169 TVIEVNKSVDRKNLLKTFDVSQMLLCIRPIQEEEEVYALEAPDTEDLVVKH 219
>Q7NSK7:FABH_CHRVO 3-oxoacyl-[acyl-carrier-protein] synthase 3 - Chromobacterium| violaceum Length = 319 Score = 31.2 bits (69), Expect = 4.6 Identities = 25/72 (34%), Positives = 36/72 (50%) Frame = +3 Query: 459 VQLDVVKAVIARKLHQLLYPSLTFKSLLQMAKKLTLIGATLMSRTAEVDQNRQCSFSWPS 638 VQ V+AV A ++ L + KS L AKK ++GA +MSR + D R C Sbjct: 104 VQAFDVQAVCAGFVYALTTANAYIKSGL--AKKALVVGAEIMSRVLDWDDRRTCVLFGDG 161 Query: 639 KPSVCI*GNSDQ 674 +V + G SD+ Sbjct: 162 AGAVVL-GESDE 172 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 112,506,668 Number of extensions: 2037999 Number of successful extensions: 5205 Number of sequences better than 10.0: 10 Number of HSP's gapped: 5195 Number of HSP's successfully gapped: 11 Length of query: 255 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 144 Effective length of database: 70,239,694 Effective search space: 10114515936 Effective search space used: 10114515936 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
