ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P83311:IBB_PHAAT Bowman-Birk type proteinase inhibitor - Phaseol... 32 5.0
2Q8U8L4:GLGB_AGRT5 1,4-alpha-glucan-branching enzyme - Agrobacter... 32 6.5
3Q96493:UFOG_GENTR Anthocyanidin 3-O-glucosyltransferase - Gentia... 32 6.6
4Q15911:ATBF1_HUMAN Alpha-fetoprotein enhancer-binding protein - ... 32 6.6
5P15822:ZEP1_HUMAN Zinc finger protein 40 - Homo sapiens (Human) 31 8.6

>P83311:IBB_PHAAT Bowman-Birk type proteinase inhibitor - Phaseolus acutifolius|
           (Tepary bean)
          Length = 80
 Score = 32.0 bits (71), Expect = 5.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 836 NEAAMETRQSHRACCSMKRCSSSLPPRCGAPLPL 937
           ++++ E  +S +ACC    C+ S+PP+C   L L
Sbjct: 6   HDSSDEPSESSKACCDHCACTKSIPPQCRCALRL 39



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>Q8U8L4:GLGB_AGRT5 1,4-alpha-glucan-branching enzyme - Agrobacterium tumefaciens|
           (strain C58 / ATCC 33970)
          Length = 735

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +3

Query: 609 PENSSILCNFVERGDDGTDILHPRH-----QRRQGGSIELLTSAAWDGRRGGTFHS*DQL 773
           P+N+S+     E      D  H  H     QRRQ  SI  + + +W  R  GTF S D+L
Sbjct: 224 PKNASVTAP--ELTQKWEDQAHREHWAQVDQRRQPISIYEVHAGSWQRREDGTFLSWDEL 281

Query: 774 SFFLFGFC 797
           +  L  +C
Sbjct: 282 AAQLIPYC 289



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>Q96493:UFOG_GENTR Anthocyanidin 3-O-glucosyltransferase - Gentiana triflora|
           (Clustered gentian)
          Length = 453

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = +1

Query: 493 PLAHNKTLVTPHCTATAPVLTDSVEGRSKRFNRLTAFHPRRILLFFATLSSVGTM 657
           P++H   L  P  T  AP+LT          NRL A  P  I  FF+T SS+ T+
Sbjct: 3   PVSHVAVLAFPFGTHAAPLLT--------LVNRLAASAPDIIFSFFSTSSSITTI 49



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>Q15911:ATBF1_HUMAN Alpha-fetoprotein enhancer-binding protein - Homo sapiens (Human)|
          Length = 3703

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = +1

Query: 214  PSTSISTPSNQRNTKAS*KITSMDRTA--NVVLDIEGLPQQPDKCCTGSPKMTRALSRKG 387
            PS    TPSN   T     +  +  T   +  L   GLP +P      SP   +A    G
Sbjct: 3132 PSLPGFTPSNTALTSPKPNLMGLPSTTVPSPGLPTSGLPNKPSSASLSSPTPAQATMAMG 3191

Query: 388  PNRMERRGGEEQEP 429
            P +  ++  ++Q+P
Sbjct: 3192 PQQPPQQQQQQQQP 3205



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>P15822:ZEP1_HUMAN Zinc finger protein 40 - Homo sapiens (Human)|
          Length = 2717

 Score = 31.2 bits (69), Expect = 8.6
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
 Frame = +1

Query: 274  TSMDRTANVVLDIEGLPQQP---DKCCTGSPKMTRALSRKGPNRMERRGGEEQEPDDLAK 444
            T +   + V +D +G P+ P    K C   PK T   S    +R E   G      + AK
Sbjct: 2552 TLIPSVSQVAVDAQGAPEMPASQSKACETQPKQTSVASANQVSRTESPQGLPTVQRENAK 2611

Query: 445  KVIIKVVPS 471
            KV+    P+
Sbjct: 2612 KVLNPPAPA 2620


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 214,854,428
Number of extensions: 4947625
Number of successful extensions: 14717
Number of sequences better than 10.0: 5
Number of HSP's gapped: 14707
Number of HSP's successfully gapped: 5
Length of query: 388
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 273
Effective length of database: 69,142,514
Effective search space: 18875906322
Effective search space used: 18875906322
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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