| Clone Name | FLbaf31h07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060760.1| Oryza sativa (japonica cultivar-group) Os04g0672300 (Os04g0672300) mRNA, complete cds Length = 1004 Score = 272 bits (137), Expect = 3e-69 Identities = 357/433 (82%), Gaps = 6/433 (1%) Strand = Plus / Plus Query: 269 agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328 |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| | Sbjct: 171 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 230 Query: 329 aacctgataaatgctgcactggaagtccaaagatgaccagagccctgtcgcgtaagggtc 388 ||||||||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 231 aacctgataaatgctgcactggaagtccaaaaatgactagagccctatctcgcaagggct 290 Query: 389 caaaccgcatggagaggaggggaggtgaagagcaggagccagatgacttggcnnnnnnng 448 |||| |||||||| |||||| | |||||||||||||| | ||||||||||| Sbjct: 291 caaatcgcatggaaaggaggagcggtgaagagcaggaacaagatgacttggtgaagaaac 350 Query: 449 ttatcattaaagttgtgccatctcagatggagcagctcaagttgccgctggcgcacaaca 508 |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||| ||| |||| Sbjct: 351 ttattattaaggttgtgccatctcagttggagcagcttaagatgcccctggtgcagaaca 410 Query: 509 aaactttggtcactc------cacattgtactgccaccgcacctgttcttaccgactctg 562 || | |||||||||| |||| ||| ||||| |||||| |||| || ||||||| Sbjct: 411 aagccttggtcactccacaatcacaatgtgctgcctgtgcacctattctaactgactctg 470 Query: 563 ttgaaggaaggtccaagagatttaatcgactcacagcatttcatccccggagaattcttc 622 ||||||||| ||||| ||||||||||| || | |||| ||||||| ||| || | Sbjct: 471 gggaaggaaggaacaagaagtttaatcgacttacttcggttcacccccggaaaatcctac 530 Query: 623 tattctttgcaactttgtcgagcgtggggacgatggtactgatatacttcaccctcggca 682 | |||||||||||| ||||||||||||| || ||| |||||||||||||||| |||| | Sbjct: 531 tgttctttgcaactctgtcgagcgtgggcacaatgatactgatatacttcacgctcgcaa 590 Query: 683 tcaacggcggcaa 695 ||||||| ||||| Sbjct: 591 tcaacggtggcaa 603
>dbj|AK101246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032C09, full insert sequence Length = 1004 Score = 272 bits (137), Expect = 3e-69 Identities = 357/433 (82%), Gaps = 6/433 (1%) Strand = Plus / Plus Query: 269 agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328 |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| | Sbjct: 171 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 230 Query: 329 aacctgataaatgctgcactggaagtccaaagatgaccagagccctgtcgcgtaagggtc 388 ||||||||||||||||||||||||||||||| ||||| |||||||| || || ||||| Sbjct: 231 aacctgataaatgctgcactggaagtccaaaaatgactagagccctatctcgcaagggct 290 Query: 389 caaaccgcatggagaggaggggaggtgaagagcaggagccagatgacttggcnnnnnnng 448 |||| |||||||| |||||| | |||||||||||||| | ||||||||||| Sbjct: 291 caaatcgcatggaaaggaggagcggtgaagagcaggaacaagatgacttggtgaagaaac 350 Query: 449 ttatcattaaagttgtgccatctcagatggagcagctcaagttgccgctggcgcacaaca 508 |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||| ||| |||| Sbjct: 351 ttattattaaggttgtgccatctcagttggagcagcttaagatgcccctggtgcagaaca 410 Query: 509 aaactttggtcactc------cacattgtactgccaccgcacctgttcttaccgactctg 562 || | |||||||||| |||| ||| ||||| |||||| |||| || ||||||| Sbjct: 411 aagccttggtcactccacaatcacaatgtgctgcctgtgcacctattctaactgactctg 470 Query: 563 ttgaaggaaggtccaagagatttaatcgactcacagcatttcatccccggagaattcttc 622 ||||||||| ||||| ||||||||||| || | |||| ||||||| ||| || | Sbjct: 471 gggaaggaaggaacaagaagtttaatcgacttacctcggttcacccccggaaaatcctac 530 Query: 623 tattctttgcaactttgtcgagcgtggggacgatggtactgatatacttcaccctcggca 682 | |||||||||||| ||||||||||||| || ||| |||||||||||||||| |||| | Sbjct: 531 tgttctttgcaactctgtcgagcgtgggcacaatgatactgatatacttcacgctcgcaa 590 Query: 683 tcaacggcggcaa 695 ||||||| ||||| Sbjct: 591 tcaacggtggcaa 603
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 137 bits (69), Expect = 1e-28 Identities = 90/97 (92%) Strand = Plus / Minus Query: 269 agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328 |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| | Sbjct: 41487 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 41428 Query: 329 aacctgataaatgctgcactggaagtccaaagatgac 365 ||||||||||||||||||||||||||||||| ||||| Sbjct: 41427 aacctgataaatgctgcactggaagtccaaaaatgac 41391 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 459 agttgtgccatctcagatggagcagctcaagttgccgctggcgcacaacaaaactttggt 518 |||||||||||||||| |||||||||| ||| |||| |||| ||| |||||| | ||||| Sbjct: 40681 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 40622 Query: 519 cactccaca 527 ||||||||| Sbjct: 40621 cactccaca 40613 Score = 65.9 bits (33), Expect = 3e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 367 agagccctgtcgcgtaagggtccaaaccgcatggagaggaggggaggtgaagagcaggag 426 |||||||| || || ||||| |||| |||||||| |||||| | ||||||||||||||| Sbjct: 41306 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggag 41247 Query: 427 ccagatgacttgg 439 | ||||||||||| Sbjct: 41246 caagatgacttgg 41234 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 639 gtcgagcgtggggacgatggtactgatatacttcaccctcggcatcaacggcggcaa 695 |||||||||||| || ||| |||||||||||||||| |||| |||||||| ||||| Sbjct: 40010 gtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatcaacggtggcaa 39954
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 137 bits (69), Expect = 1e-28 Identities = 90/97 (92%) Strand = Plus / Minus Query: 269 agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328 |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| | Sbjct: 81506 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 81447 Query: 329 aacctgataaatgctgcactggaagtccaaagatgac 365 ||||||||||||||||||||||||||||||| ||||| Sbjct: 81446 aacctgataaatgctgcactggaagtccaaaaatgac 81410 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 459 agttgtgccatctcagatggagcagctcaagttgccgctggcgcacaacaaaactttggt 518 |||||||||||||||| |||||||||| ||| |||| |||| ||| |||||| | ||||| Sbjct: 80687 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 80628 Query: 519 cactccaca 527 ||||||||| Sbjct: 80627 cactccaca 80619 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 639 gtcgagcgtggggacgatggtactgatatacttcaccctcggcatcaacggcggcaa 695 |||||||||||| || ||| |||||||||||||||| |||| |||||||| ||||| Sbjct: 80016 gtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatcaacggtggcaa 79960 Score = 58.0 bits (29), Expect = 7e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 367 agagccctgtcgcgtaagggtccaaaccgcatggagaggaggggaggtgaagagcaggag 426 |||||||| || || ||||| |||| |||||||| |||||| | |||||||||||||| Sbjct: 81325 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggaa 81266 Query: 427 ccagatgacttgg 439 | ||||||||||| Sbjct: 81265 caagatgacttgg 81253
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 137 bits (69), Expect = 1e-28 Identities = 90/97 (92%) Strand = Plus / Minus Query: 269 agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328 |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| | Sbjct: 34357103 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 34357044 Query: 329 aacctgataaatgctgcactggaagtccaaagatgac 365 ||||||||||||||||||||||||||||||| ||||| Sbjct: 34357043 aacctgataaatgctgcactggaagtccaaaaatgac 34357007 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 459 agttgtgccatctcagatggagcagctcaagttgccgctggcgcacaacaaaactttggt 518 |||||||||||||||| |||||||||| ||| |||| |||| ||| |||||| | ||||| Sbjct: 34356284 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 34356225 Query: 519 cactccaca 527 ||||||||| Sbjct: 34356224 cactccaca 34356216 Score = 58.0 bits (29), Expect = 7e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 639 gtcgagcgtggggacgatggtactgatatacttcaccctcggcatcaacggcggcaa 695 |||||||||||| || ||| |||||||||||||||| |||| |||||||| ||||| Sbjct: 34355613 gtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatcaacggtggcaa 34355557 Score = 58.0 bits (29), Expect = 7e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 367 agagccctgtcgcgtaagggtccaaaccgcatggagaggaggggaggtgaagagcaggag 426 |||||||| || || ||||| |||| |||||||| |||||| | |||||||||||||| Sbjct: 34356922 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggaa 34356863 Query: 427 ccagatgacttgg 439 | ||||||||||| Sbjct: 34356862 caagatgacttgg 34356850
>gb|AY110572.1| Zea mays CL17835_1 mRNA sequence Length = 796 Score = 89.7 bits (45), Expect = 2e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 295 aatgtggtattggatattgagggtctgcctcaacaacctgataaatgctgcactggaagt 354 |||| |||||||||||| ||||| || ||||||| ||||||||||||||| |||| ||| Sbjct: 687 aatgcggtattggatatcgagggccttcctcaaccgcctgataaatgctgctctgggagt 628 Query: 355 ccaaagatgaccagagccctgtcgcgtaagggt 387 || ||||||| ||| ||| |||||||||||||| Sbjct: 627 ccgaagatgatcagggccttgtcgcgtaagggt 595 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 638 tgtcgagcgtggggacgatggtactgatatacttcac 674 |||||||||||||||| | | ||||||| |||||||| Sbjct: 344 tgtcgagcgtggggacaacgatactgatctacttcac 308
>emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chromosome 1 Contains the 5' end of the gene for nuclear pore membrane glycoprotein 210-like (LOC91181), the TPM3 gene for tropomyosin 3, a novel gene, the gene for NICE-3 protein (NICE-3), the gene for NICE-4 protein (NICE-4) and a CpG island, complete sequence Length = 119460 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 408 gggaggtgaagagcaggagccag 430 ||||||||||||||||||||||| Sbjct: 41274 gggaggtgaagagcaggagccag 41252
>gb|AC152891.2| Pan troglodytes chromosome X clone RP43-038O03 map human ortholog Xq23, complete sequence Length = 197819 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 577 aagagatttaatcgactcacag 598 |||||||||||||||||||||| Sbjct: 57663 aagagatttaatcgactcacag 57642
>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence Length = 154037 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 577 aagagatttaatcgactcacag 598 |||||||||||||||||||||| Sbjct: 65393 aagagatttaatcgactcacag 65372
>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13 Contains the 5' UTR of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3, the 3' end of the ECE1 gene for endothelin converting enzyme 1, a novel gene and a CpG island, complete sequence Length = 109906 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 405 gaggggaggtgaagagcaggag 426 |||||||||||||||||||||| Sbjct: 3763 gaggggaggtgaagagcaggag 3784
>gb|AC093514.2| Homo sapiens chromosome 16 clone CTD-2517O22, complete sequence Length = 147330 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 caccacctctcctctccctcca 39 |||||||||||||||||||||| Sbjct: 74539 caccacctctcctctccctcca 74518
>emb|AL512662.8| Human DNA sequence from clone RP11-479O17 on chromosome 10 Contains a cathepsin L (CTSL) pseudogene, a protein geranylgeranyltransferase type I beta subunit (PGGT1B) pseudogene, the MBL1P1 gene for mannose-binding lectin (protein A) 1 pseudogene 1, the SFTPD gene for surfactant pulmonary-associated protein D, a novel gene, two novel pseudogenes and three CpG islands, complete sequence Length = 134411 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 577 aagagatttaatcgactcacag 598 |||||||||||||||||||||| Sbjct: 8244 aagagatttaatcgactcacag 8223
>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part of the NTNG1 gene for netrin G1, complete sequence Length = 122032 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 577 aagagatttaatcgactcacag 598 |||||||||||||||||||||| Sbjct: 57110 aagagatttaatcgactcacag 57131
>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a novel gene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 197634 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 577 aagagatttaatcgactcacag 598 |||||||||||||||||||||| Sbjct: 126522 aagagatttaatcgactcacag 126543
>emb|AL118496.22|HSJ136J15 Human DNA sequence from clone RP1-136J15 on chromosome Xq23-24 Contains a mitofusin 1 (MFN1) pseudogene, the KCNE1L gene for potassium voltage-gated channel, Isk-related family, member 1-like, the 3' end of the FACL4 gene for fatty-acid-Coenzyme A ligase long-chain 4, a novel gene and two CpG islands, complete sequence Length = 125465 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 577 aagagatttaatcgactcacag 598 |||||||||||||||||||||| Sbjct: 87382 aagagatttaatcgactcacag 87361
>emb|AJ318588.1|AMA318588 Aristida mauritiana partial mRNA for putative phosphoenolpyruvate carboxylase (pepc gene) Length = 1142 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 gccactcctgccgcttctcctc 85 |||||||||||||||||||||| Sbjct: 931 gccactcctgccgcttctcctc 910
>emb|AJ318584.1|PGE318584 Paspalidium geminatum partial mRNA for putative phosphoenolpyruvate carboxylase (pepc gene) Length = 1188 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 gccactcctgccgcttctcctc 85 |||||||||||||||||||||| Sbjct: 961 gccactcctgccgcttctcctc 940
>gb|AC026462.5| Homo sapiens chromosome 16 clone RP11-297L17, complete sequence Length = 179640 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccacctctcctctccctcca 39 |||||||||||||||||||||| Sbjct: 51671 caccacctctcctctccctcca 51692
>emb|AJ518834.1|HLA518834 Holcus lanatus partial pepc gene for phosphoenolpyruvate carboxylase, exons 1-2 Length = 597 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 gccactcctgccgcttctcctc 85 |||||||||||||||||||||| Sbjct: 429 gccactcctgccgcttctcctc 408
>emb|AL845277.11| Mouse DNA sequence from clone RP23-35J6 on chromosome 2, complete sequence Length = 225087 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cagtccaccacctctcctctcc 34 |||||||||||||||||||||| Sbjct: 142425 cagtccaccacctctcctctcc 142446
>emb|AJ342483.1|HSA342483 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OC23R Length = 801 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 963 ataaagagtgtgtgtgactgac 984 |||||||||||||||||||||| Sbjct: 772 ataaagagtgtgtgtgactgac 751
>gb|AF075610.1| Equus caballus microsatellite LEX007 Length = 401 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 954 tgtgtacgtataaagagtgtgtgtg 978 |||||| |||||||||||||||||| Sbjct: 153 tgtgtaagtataaagagtgtgtgtg 177
>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence Length = 221920 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 aatccaaccagcaccaggaaa 164 ||||||||||||||||||||| Sbjct: 87688 aatccaaccagcaccaggaaa 87668
>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence Length = 210189 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 840 aagcagcaatggagacgagac 860 ||||||||||||||||||||| Sbjct: 117070 aagcagcaatggagacgagac 117090
>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence Length = 222520 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 aatccaaccagcaccaggaaa 164 ||||||||||||||||||||| Sbjct: 80161 aatccaaccagcaccaggaaa 80141
>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome Length = 1395502 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 tggatattgagggtctgcctc 325 ||||||||||||||||||||| Sbjct: 646698 tggatattgagggtctgcctc 646718
>gb|AC023380.9| Homo sapiens chromosome 18, clone RP11-27C7, complete sequence Length = 121821 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ggagaggaggggaggtgaaga 419 ||||||||||||||||||||| Sbjct: 58203 ggagaggaggggaggtgaaga 58223
>gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, complete sequence Length = 149913 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 ggagaggaggggaggtgaaga 419 ||||||||||||||||||||| Sbjct: 6086 ggagaggaggggaggtgaaga 6066
>emb|AL139348.3| Human DNA sequence from clone RP11-151E14 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 68631 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 atcccaggagaatccaaccagcacc 158 |||||||||||| |||||||||||| Sbjct: 58118 atcccaggagaaaccaaccagcacc 58142
>emb|AL133351.34| Human DNA sequence from clone RP1-90J20 on chromosome 6p24.1-25.3 Contains the 5' end of a putative novel gene, the SERPINB9 gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 9, a novel gene, the SERPINB6 gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 6, three putative novel genes, the gene for NAD(P)H dehydrogenase quinone 2 (NQO2) and eight predicted CpG islands, complete sequence Length = 173670 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 cacctctcctctccctccaca 41 ||||||||||||||||||||| Sbjct: 6418 cacctctcctctccctccaca 6438
>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence Length = 202346 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 aatccaaccagcaccaggaaa 164 ||||||||||||||||||||| Sbjct: 134105 aatccaaccagcaccaggaaa 134085
>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two novel genes, the 3' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two CpG islands, complete sequence Length = 190198 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 ggagaattcttctattctttg 631 ||||||||||||||||||||| Sbjct: 99640 ggagaattcttctattctttg 99620
>gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, complete sequence Length = 204674 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 cctctcctctccctccacagc 43 ||||||||||||||||||||| Sbjct: 27700 cctctcctctccctccacagc 27720
>emb|AL365475.1|CNS05TF6 Human chromosome 14 DNA sequence BAC R-452D12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187947 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 agagatttaatcgactcacag 598 ||||||||||||||||||||| Sbjct: 128455 agagatttaatcgactcacag 128435
>emb|AL355833.4|CNS05TCS Human chromosome 14 DNA sequence BAC R-262M8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197817 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 agagatttaatcgactcacag 598 ||||||||||||||||||||| Sbjct: 185005 agagatttaatcgactcacag 184985
>emb|AL607090.12| Mouse DNA sequence from clone RP23-273I17 on chromosome 4, complete sequence Length = 153056 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 cctggagagacctcagggtcc 215 ||||||||||||||||||||| Sbjct: 12533 cctggagagacctcagggtcc 12513 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 207,600,255 Number of extensions: 11221498 Number of successful extensions: 232010 Number of sequences better than 10.0: 36 Number of HSP's gapped: 232008 Number of HSP's successfully gapped: 50 Length of query: 1165 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1142 Effective length of database: 18,503,978,556 Effective search space: 21131543510952 Effective search space used: 21131543510952 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)