ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001060760.1| Oryza sativa (japonica cultivar-group) Os04g... 272 3e-69
2dbj|AK101246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 3e-69
3emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 137 1e-28
4emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 137 1e-28
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 137 1e-28
6gb|AY110572.1| Zea mays CL17835_1 mRNA sequence 90 2e-14
7emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chr... 46 0.28
8gb|AC152891.2| Pan troglodytes chromosome X clone RP43-038O03 ma... 44 1.1
9gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, comple... 44 1.1
10emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20... 44 1.1
11gb|AC093514.2| Homo sapiens chromosome 16 clone CTD-2517O22, com... 44 1.1
12emb|AL512662.8| Human DNA sequence from clone RP11-479O17 on chr... 44 1.1
13emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chro... 44 1.1
14emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chr... 44 1.1
15emb|AL118496.22|HSJ136J15 Human DNA sequence from clone RP1-136J... 44 1.1
16emb|AJ318588.1|AMA318588 Aristida mauritiana partial mRNA for pu... 44 1.1
17emb|AJ318584.1|PGE318584 Paspalidium geminatum partial mRNA for ... 44 1.1
18gb|AC026462.5| Homo sapiens chromosome 16 clone RP11-297L17, com... 44 1.1
19emb|AJ518834.1|HLA518834 Holcus lanatus partial pepc gene for ph... 44 1.1
20emb|AL845277.11| Mouse DNA sequence from clone RP23-35J6 on chro... 44 1.1
21emb|AJ342483.1|HSA342483 Homo sapiens genomic sequence surroundi... 44 1.1
22gb|AF075610.1| Equus caballus microsatellite LEX007 42 4.4
23gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, comple... 42 4.4
24gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, compl... 42 4.4
25gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105... 42 4.4
26emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome 42 4.4
27gb|AC023380.9| Homo sapiens chromosome 18, clone RP11-27C7, comp... 42 4.4
28gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, com... 42 4.4
29emb|AL139348.3| Human DNA sequence from clone RP11-151E14 on chr... 42 4.4
30emb|AL133351.34| Human DNA sequence from clone RP1-90J20 on chro... 42 4.4
31gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome... 42 4.4
32emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on ch... 42 4.4
33gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, co... 42 4.4
34emb|AL365475.1|CNS05TF6 Human chromosome 14 DNA sequence BAC R-4... 42 4.4
35emb|AL355833.4|CNS05TCS Human chromosome 14 DNA sequence BAC R-2... 42 4.4
36emb|AL607090.12| Mouse DNA sequence from clone RP23-273I17 on ch... 42 4.4

>ref|NM_001060760.1| Oryza sativa (japonica cultivar-group) Os04g0672300 (Os04g0672300)
           mRNA, complete cds
          Length = 1004
 Score =  272 bits (137), Expect = 3e-69
 Identities = 357/433 (82%), Gaps = 6/433 (1%)
 Strand = Plus / Plus

                                                                       
Query: 269 agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328
           |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| |
Sbjct: 171 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 230

                                                                       
Query: 329 aacctgataaatgctgcactggaagtccaaagatgaccagagccctgtcgcgtaagggtc 388
           ||||||||||||||||||||||||||||||| ||||| |||||||| || || |||||  
Sbjct: 231 aacctgataaatgctgcactggaagtccaaaaatgactagagccctatctcgcaagggct 290

                                                                       
Query: 389 caaaccgcatggagaggaggggaggtgaagagcaggagccagatgacttggcnnnnnnng 448
           |||| |||||||| |||||| | |||||||||||||| | |||||||||||         
Sbjct: 291 caaatcgcatggaaaggaggagcggtgaagagcaggaacaagatgacttggtgaagaaac 350

                                                                       
Query: 449 ttatcattaaagttgtgccatctcagatggagcagctcaagttgccgctggcgcacaaca 508
           |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||| ||| ||||
Sbjct: 351 ttattattaaggttgtgccatctcagttggagcagcttaagatgcccctggtgcagaaca 410

                                                                       
Query: 509 aaactttggtcactc------cacattgtactgccaccgcacctgttcttaccgactctg 562
           || | ||||||||||      |||| ||| |||||   |||||| |||| || |||||||
Sbjct: 411 aagccttggtcactccacaatcacaatgtgctgcctgtgcacctattctaactgactctg 470

                                                                       
Query: 563 ttgaaggaaggtccaagagatttaatcgactcacagcatttcatccccggagaattcttc 622
             |||||||||  |||||  ||||||||||| ||  |  |||| ||||||| ||| || |
Sbjct: 471 gggaaggaaggaacaagaagtttaatcgacttacttcggttcacccccggaaaatcctac 530

                                                                       
Query: 623 tattctttgcaactttgtcgagcgtggggacgatggtactgatatacttcaccctcggca 682
           | |||||||||||| ||||||||||||| || ||| |||||||||||||||| ||||  |
Sbjct: 531 tgttctttgcaactctgtcgagcgtgggcacaatgatactgatatacttcacgctcgcaa 590

                        
Query: 683 tcaacggcggcaa 695
           ||||||| |||||
Sbjct: 591 tcaacggtggcaa 603



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>dbj|AK101246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032C09, full
           insert sequence
          Length = 1004

 Score =  272 bits (137), Expect = 3e-69
 Identities = 357/433 (82%), Gaps = 6/433 (1%)
 Strand = Plus / Plus

                                                                       
Query: 269 agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328
           |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| |
Sbjct: 171 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 230

                                                                       
Query: 329 aacctgataaatgctgcactggaagtccaaagatgaccagagccctgtcgcgtaagggtc 388
           ||||||||||||||||||||||||||||||| ||||| |||||||| || || |||||  
Sbjct: 231 aacctgataaatgctgcactggaagtccaaaaatgactagagccctatctcgcaagggct 290

                                                                       
Query: 389 caaaccgcatggagaggaggggaggtgaagagcaggagccagatgacttggcnnnnnnng 448
           |||| |||||||| |||||| | |||||||||||||| | |||||||||||         
Sbjct: 291 caaatcgcatggaaaggaggagcggtgaagagcaggaacaagatgacttggtgaagaaac 350

                                                                       
Query: 449 ttatcattaaagttgtgccatctcagatggagcagctcaagttgccgctggcgcacaaca 508
           |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||| ||| ||||
Sbjct: 351 ttattattaaggttgtgccatctcagttggagcagcttaagatgcccctggtgcagaaca 410

                                                                       
Query: 509 aaactttggtcactc------cacattgtactgccaccgcacctgttcttaccgactctg 562
           || | ||||||||||      |||| ||| |||||   |||||| |||| || |||||||
Sbjct: 411 aagccttggtcactccacaatcacaatgtgctgcctgtgcacctattctaactgactctg 470

                                                                       
Query: 563 ttgaaggaaggtccaagagatttaatcgactcacagcatttcatccccggagaattcttc 622
             |||||||||  |||||  ||||||||||| ||  |  |||| ||||||| ||| || |
Sbjct: 471 gggaaggaaggaacaagaagtttaatcgacttacctcggttcacccccggaaaatcctac 530

                                                                       
Query: 623 tattctttgcaactttgtcgagcgtggggacgatggtactgatatacttcaccctcggca 682
           | |||||||||||| ||||||||||||| || ||| |||||||||||||||| ||||  |
Sbjct: 531 tgttctttgcaactctgtcgagcgtgggcacaatgatactgatatacttcacgctcgcaa 590

                        
Query: 683 tcaacggcggcaa 695
           ||||||| |||||
Sbjct: 591 tcaacggtggcaa 603



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>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete
             sequence
          Length = 100419

 Score =  137 bits (69), Expect = 1e-28
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                         
Query: 269   agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328
             |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| |
Sbjct: 41487 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 41428

                                                  
Query: 329   aacctgataaatgctgcactggaagtccaaagatgac 365
             ||||||||||||||||||||||||||||||| |||||
Sbjct: 41427 aacctgataaatgctgcactggaagtccaaaaatgac 41391



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 459   agttgtgccatctcagatggagcagctcaagttgccgctggcgcacaacaaaactttggt 518
             |||||||||||||||| |||||||||| ||| |||| |||| ||| |||||| | |||||
Sbjct: 40681 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 40622

                      
Query: 519   cactccaca 527
             |||||||||
Sbjct: 40621 cactccaca 40613



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 367   agagccctgtcgcgtaagggtccaaaccgcatggagaggaggggaggtgaagagcaggag 426
             |||||||| || || |||||  |||| |||||||| |||||| | |||||||||||||||
Sbjct: 41306 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggag 41247

                          
Query: 427   ccagatgacttgg 439
             | |||||||||||
Sbjct: 41246 caagatgacttgg 41234



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 639   gtcgagcgtggggacgatggtactgatatacttcaccctcggcatcaacggcggcaa 695
             |||||||||||| || ||| |||||||||||||||| ||||  |||||||| |||||
Sbjct: 40010 gtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatcaacggtggcaa 39954



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>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score =  137 bits (69), Expect = 1e-28
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                         
Query: 269   agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328
             |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| |
Sbjct: 81506 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 81447

                                                  
Query: 329   aacctgataaatgctgcactggaagtccaaagatgac 365
             ||||||||||||||||||||||||||||||| |||||
Sbjct: 81446 aacctgataaatgctgcactggaagtccaaaaatgac 81410



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 459   agttgtgccatctcagatggagcagctcaagttgccgctggcgcacaacaaaactttggt 518
             |||||||||||||||| |||||||||| ||| |||| |||| ||| |||||| | |||||
Sbjct: 80687 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 80628

                      
Query: 519   cactccaca 527
             |||||||||
Sbjct: 80627 cactccaca 80619



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 639   gtcgagcgtggggacgatggtactgatatacttcaccctcggcatcaacggcggcaa 695
             |||||||||||| || ||| |||||||||||||||| ||||  |||||||| |||||
Sbjct: 80016 gtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatcaacggtggcaa 79960



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 367   agagccctgtcgcgtaagggtccaaaccgcatggagaggaggggaggtgaagagcaggag 426
             |||||||| || || |||||  |||| |||||||| |||||| | |||||||||||||| 
Sbjct: 81325 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggaa 81266

                          
Query: 427   ccagatgacttgg 439
             | |||||||||||
Sbjct: 81265 caagatgacttgg 81253



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  137 bits (69), Expect = 1e-28
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                            
Query: 269      agatcacaagcatggacaggacagcaaatgtggtattggatattgagggtctgcctcaac 328
                |||| ||||||||||||| | ||||||||||||||||||||||||| || |||||||| |
Sbjct: 34357103 agatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagc 34357044

                                                     
Query: 329      aacctgataaatgctgcactggaagtccaaagatgac 365
                ||||||||||||||||||||||||||||||| |||||
Sbjct: 34357043 aacctgataaatgctgcactggaagtccaaaaatgac 34357007



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 459      agttgtgccatctcagatggagcagctcaagttgccgctggcgcacaacaaaactttggt 518
                |||||||||||||||| |||||||||| ||| |||| |||| ||| |||||| | |||||
Sbjct: 34356284 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 34356225

                         
Query: 519      cactccaca 527
                |||||||||
Sbjct: 34356224 cactccaca 34356216



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 639      gtcgagcgtggggacgatggtactgatatacttcaccctcggcatcaacggcggcaa 695
                |||||||||||| || ||| |||||||||||||||| ||||  |||||||| |||||
Sbjct: 34355613 gtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatcaacggtggcaa 34355557



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                            
Query: 367      agagccctgtcgcgtaagggtccaaaccgcatggagaggaggggaggtgaagagcaggag 426
                |||||||| || || |||||  |||| |||||||| |||||| | |||||||||||||| 
Sbjct: 34356922 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggaa 34356863

                             
Query: 427      ccagatgacttgg 439
                | |||||||||||
Sbjct: 34356862 caagatgacttgg 34356850



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>gb|AY110572.1| Zea mays CL17835_1 mRNA sequence
          Length = 796

 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                       
Query: 295 aatgtggtattggatattgagggtctgcctcaacaacctgataaatgctgcactggaagt 354
           |||| |||||||||||| ||||| || |||||||  ||||||||||||||| |||| |||
Sbjct: 687 aatgcggtattggatatcgagggccttcctcaaccgcctgataaatgctgctctgggagt 628

                                            
Query: 355 ccaaagatgaccagagccctgtcgcgtaagggt 387
           || ||||||| ||| ||| ||||||||||||||
Sbjct: 627 ccgaagatgatcagggccttgtcgcgtaagggt 595



 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 638 tgtcgagcgtggggacgatggtactgatatacttcac 674
           |||||||||||||||| | | ||||||| ||||||||
Sbjct: 344 tgtcgagcgtggggacaacgatactgatctacttcac 308



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>emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chromosome 1 Contains the
             5' end of the gene for nuclear pore membrane glycoprotein
             210-like (LOC91181), the TPM3 gene for tropomyosin 3, a
             novel gene, the gene for NICE-3 protein (NICE-3), the gene
             for NICE-4 protein (NICE-4) and a CpG island, complete
             sequence
          Length = 119460

 Score = 46.1 bits (23), Expect = 0.28
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 408   gggaggtgaagagcaggagccag 430
             |||||||||||||||||||||||
Sbjct: 41274 gggaggtgaagagcaggagccag 41252



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>gb|AC152891.2| Pan troglodytes chromosome X clone RP43-038O03 map human ortholog Xq23,
             complete sequence
          Length = 197819

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 577   aagagatttaatcgactcacag 598
             ||||||||||||||||||||||
Sbjct: 57663 aagagatttaatcgactcacag 57642



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>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence
          Length = 154037

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 577   aagagatttaatcgactcacag 598
             ||||||||||||||||||||||
Sbjct: 65393 aagagatttaatcgactcacag 65372



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>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13
            Contains the 5' UTR of the EIF4G3 gene for  eukaryotic
            translation initiation factor 4 gamma, 3, the 3' end of
            the ECE1 gene for endothelin converting enzyme 1, a novel
            gene and a CpG island, complete sequence
          Length = 109906

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 405  gaggggaggtgaagagcaggag 426
            ||||||||||||||||||||||
Sbjct: 3763 gaggggaggtgaagagcaggag 3784



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>gb|AC093514.2| Homo sapiens chromosome 16 clone CTD-2517O22, complete sequence
          Length = 147330

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    caccacctctcctctccctcca 39
             ||||||||||||||||||||||
Sbjct: 74539 caccacctctcctctccctcca 74518



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>emb|AL512662.8| Human DNA sequence from clone RP11-479O17 on chromosome 10 Contains a
            cathepsin L (CTSL) pseudogene, a protein
            geranylgeranyltransferase type I beta subunit (PGGT1B)
            pseudogene, the MBL1P1 gene for mannose-binding lectin
            (protein A) 1 pseudogene 1, the SFTPD gene for surfactant
            pulmonary-associated protein D, a novel gene, two novel
            pseudogenes and three CpG islands, complete sequence
          Length = 134411

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 577  aagagatttaatcgactcacag 598
            ||||||||||||||||||||||
Sbjct: 8244 aagagatttaatcgactcacag 8223



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>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part
             of the NTNG1 gene for netrin G1, complete sequence
          Length = 122032

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 577   aagagatttaatcgactcacag 598
             ||||||||||||||||||||||
Sbjct: 57110 aagagatttaatcgactcacag 57131



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>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat
              shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a
              novel gene and a ribosomal protein L21 (RPL21) pseudogene,
              complete sequence
          Length = 197634

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 577    aagagatttaatcgactcacag 598
              ||||||||||||||||||||||
Sbjct: 126522 aagagatttaatcgactcacag 126543



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>emb|AL118496.22|HSJ136J15 Human DNA sequence from clone RP1-136J15 on chromosome Xq23-24 Contains
             a mitofusin 1 (MFN1) pseudogene, the KCNE1L gene for
             potassium voltage-gated channel, Isk-related family,
             member 1-like, the 3' end of the FACL4 gene for
             fatty-acid-Coenzyme A ligase long-chain 4, a novel gene
             and two CpG islands, complete sequence
          Length = 125465

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 577   aagagatttaatcgactcacag 598
             ||||||||||||||||||||||
Sbjct: 87382 aagagatttaatcgactcacag 87361



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>emb|AJ318588.1|AMA318588 Aristida mauritiana partial mRNA for putative phosphoenolpyruvate
           carboxylase (pepc gene)
          Length = 1142

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 64  gccactcctgccgcttctcctc 85
           ||||||||||||||||||||||
Sbjct: 931 gccactcctgccgcttctcctc 910



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>emb|AJ318584.1|PGE318584 Paspalidium geminatum partial mRNA for putative phosphoenolpyruvate
           carboxylase (pepc gene)
          Length = 1188

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 64  gccactcctgccgcttctcctc 85
           ||||||||||||||||||||||
Sbjct: 961 gccactcctgccgcttctcctc 940



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>gb|AC026462.5| Homo sapiens chromosome 16 clone RP11-297L17, complete sequence
          Length = 179640

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 18    caccacctctcctctccctcca 39
             ||||||||||||||||||||||
Sbjct: 51671 caccacctctcctctccctcca 51692



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>emb|AJ518834.1|HLA518834 Holcus lanatus partial pepc gene for phosphoenolpyruvate
           carboxylase, exons 1-2
          Length = 597

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 64  gccactcctgccgcttctcctc 85
           ||||||||||||||||||||||
Sbjct: 429 gccactcctgccgcttctcctc 408



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>emb|AL845277.11| Mouse DNA sequence from clone RP23-35J6 on chromosome 2, complete
              sequence
          Length = 225087

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 13     cagtccaccacctctcctctcc 34
              ||||||||||||||||||||||
Sbjct: 142425 cagtccaccacctctcctctcc 142446



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>emb|AJ342483.1|HSA342483 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-OC23R
          Length = 801

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 963 ataaagagtgtgtgtgactgac 984
           ||||||||||||||||||||||
Sbjct: 772 ataaagagtgtgtgtgactgac 751



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>gb|AF075610.1| Equus caballus microsatellite LEX007
          Length = 401

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 954 tgtgtacgtataaagagtgtgtgtg 978
           |||||| ||||||||||||||||||
Sbjct: 153 tgtgtaagtataaagagtgtgtgtg 177



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>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence
          Length = 221920

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   aatccaaccagcaccaggaaa 164
             |||||||||||||||||||||
Sbjct: 87688 aatccaaccagcaccaggaaa 87668



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>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence
          Length = 210189

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 840    aagcagcaatggagacgagac 860
              |||||||||||||||||||||
Sbjct: 117070 aagcagcaatggagacgagac 117090



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>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence
          Length = 222520

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   aatccaaccagcaccaggaaa 164
             |||||||||||||||||||||
Sbjct: 80161 aatccaaccagcaccaggaaa 80141



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>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome
          Length = 1395502

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    tggatattgagggtctgcctc 325
              |||||||||||||||||||||
Sbjct: 646698 tggatattgagggtctgcctc 646718



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>gb|AC023380.9| Homo sapiens chromosome 18, clone RP11-27C7, complete sequence
          Length = 121821

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 399   ggagaggaggggaggtgaaga 419
             |||||||||||||||||||||
Sbjct: 58203 ggagaggaggggaggtgaaga 58223



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>gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, complete sequence
          Length = 149913

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 399  ggagaggaggggaggtgaaga 419
            |||||||||||||||||||||
Sbjct: 6086 ggagaggaggggaggtgaaga 6066



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>emb|AL139348.3| Human DNA sequence from clone RP11-151E14 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 68631

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 134   atcccaggagaatccaaccagcacc 158
             |||||||||||| ||||||||||||
Sbjct: 58118 atcccaggagaaaccaaccagcacc 58142



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>emb|AL133351.34| Human DNA sequence from clone RP1-90J20 on chromosome 6p24.1-25.3
            Contains the 5' end of a putative novel gene, the
            SERPINB9 gene for serine (or cysteine) proteinase
            inhibitor clade B (ovalbumin) member 9, a novel gene, the
            SERPINB6 gene for serine (or cysteine) proteinase
            inhibitor clade B (ovalbumin) member 6, three putative
            novel genes, the gene for NAD(P)H dehydrogenase quinone 2
            (NQO2) and eight predicted CpG islands, complete sequence
          Length = 173670

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 21   cacctctcctctccctccaca 41
            |||||||||||||||||||||
Sbjct: 6418 cacctctcctctccctccaca 6438



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>gb|AC150899.3| Mus musculus BAC clone RP23-179F8 from chromosome 10, complete sequence
          Length = 202346

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 144    aatccaaccagcaccaggaaa 164
              |||||||||||||||||||||
Sbjct: 134105 aatccaaccagcaccaggaaa 134085



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>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two
             novel genes, the 3' end of the Meis1 gene for myeloid
             ecotropic viral integration site 1 and two CpG islands,
             complete sequence
          Length = 190198

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 611   ggagaattcttctattctttg 631
             |||||||||||||||||||||
Sbjct: 99640 ggagaattcttctattctttg 99620



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>gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, complete sequence
          Length = 204674

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    cctctcctctccctccacagc 43
             |||||||||||||||||||||
Sbjct: 27700 cctctcctctccctccacagc 27720



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>emb|AL365475.1|CNS05TF6 Human chromosome 14 DNA sequence BAC R-452D12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187947

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 578    agagatttaatcgactcacag 598
              |||||||||||||||||||||
Sbjct: 128455 agagatttaatcgactcacag 128435



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>emb|AL355833.4|CNS05TCS Human chromosome 14 DNA sequence BAC R-262M8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197817

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 578    agagatttaatcgactcacag 598
              |||||||||||||||||||||
Sbjct: 185005 agagatttaatcgactcacag 184985



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>emb|AL607090.12| Mouse DNA sequence from clone RP23-273I17 on chromosome 4, complete
             sequence
          Length = 153056

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   cctggagagacctcagggtcc 215
             |||||||||||||||||||||
Sbjct: 12533 cctggagagacctcagggtcc 12513


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 207,600,255
Number of extensions: 11221498
Number of successful extensions: 232010
Number of sequences better than 10.0: 36
Number of HSP's gapped: 232008
Number of HSP's successfully gapped: 50
Length of query: 1165
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1142
Effective length of database: 18,503,978,556
Effective search space: 21131543510952
Effective search space used: 21131543510952
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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