ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34g13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102406:Os04g0166600 362 e-100
2Os02g0823200:Os02g0823200 285 5e-77
3AK068930:Os10g0358600 212 4e-55
4Os12g0117800:Os12g0117800 36 0.074
5AK111023:Os01g0863500 32 1.1
6AK099945:Os01g0889900 31 1.8
7AK110042: 31 2.4
8AK107335: 31 2.4
9AK111323:Os10g0137100 30 3.1
10AK063708:Os02g0530300 30 4.0
11Os05g0520100:Os05g0520100 30 5.3
12AK107200:Os08g0158800 30 5.3
13Os04g0280200:Os04g0280200 29 6.9
14AK110069: 29 6.9
15AK107386:Os08g0193900 29 9.0
16AK106333:Os01g0575200 29 9.0
17AK062820:Os08g0565800 29 9.0

>AK102406:Os04g0166600 |
          Length = 221
 Score =  362 bits (929), Expect = e-100
 Identities = 180/219 (82%), Positives = 192/219 (87%)
 Frame = +3

Query: 294 TDVCSSRMLSLPRYESGDEELTVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHW 473
           T++CSSR+LS PRYESGDEEL+VLPRHTKV+VTGNNRTKSVLVGLQGVVKKAVGLGGWHW
Sbjct: 5   TELCSSRVLSPPRYESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHW 64

Query: 474 LVLKNGVEVKLQRNALSVLEAPTXXXXXXXXXXXXXSFCGSFDMGDKDMNYSSIEYQKPT 653
           LVLKNGVEVKLQRNALSVLE PT             SFC S DMGDKDM+YSSIEY KPT
Sbjct: 65  LVLKNGVEVKLQRNALSVLEPPT-GNEDDDDIDGNNSFCSSSDMGDKDMDYSSIEYHKPT 123

Query: 654 KPRVRHTRPWSSCTTTSSSRANLHSTSKLRARVNLTKLGTPTLWRYWKHFNLVSMNPSPS 833
           KPRVRHTRPWSSC   SS+R N H ++KLR RVNLTKLGTPTLWRYWKHFNLVSMNP+PS
Sbjct: 124 KPRVRHTRPWSSC-IKSSNRGNFHPSTKLRTRVNLTKLGTPTLWRYWKHFNLVSMNPNPS 182

Query: 834 EEQLFHGVQQHFQSQQLDELQVILGFIQTAKRLKTLYNN 950
           +EQLFHGVQQHFQSQQLDELQVILGFIQ AKRLKTLY +
Sbjct: 183 KEQLFHGVQQHFQSQQLDELQVILGFIQAAKRLKTLYRS 221



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>Os02g0823200:Os02g0823200 |
          Length = 385

 Score =  285 bits (729), Expect = 5e-77
 Identities = 150/216 (69%), Positives = 161/216 (74%)
 Frame = +3

Query: 294 TDVCSSRMLSLPRYESGDEELTVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHW 473
           T++CSSR+LSLPRY+SGDEEL+VLPRHTKV+VTGNNRTKSVLVGLQGVVKKAVGLGGWHW
Sbjct: 122 TELCSSRVLSLPRYDSGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHW 181

Query: 474 LVLKNGVEVKLQRNALSVLEAPTXXXXXXXXXXXXXSFCGSFDMGDKDMNYSSIEYQKPT 653
           LVLKNGVEVKLQRNALSVLE PT             SFC S DMGDKDM+YS IEY KPT
Sbjct: 182 LVLKNGVEVKLQRNALSVLEPPT-GNEDDDDIDGNNSFCSSSDMGDKDMDYSIIEYHKPT 240

Query: 654 KPRVRHTRPWSSCTTTSSSRANLHSTSKLRARVNLTKLGTPTLWRYWKHFNLVSMNPSPS 833
           KPRVRHTRPWSSC T SS+R N H +S L+ RVNLT+LGTPTLWRYWKHFNL        
Sbjct: 241 KPRVRHTRPWSSC-TKSSNRGNFHPSSILQTRVNLTRLGTPTLWRYWKHFNL-------- 291

Query: 834 EEQLFHGVQQHFQSQQLDELQVILGFIQTAKRLKTL 941
                                VILGFIQ AKRLKTL
Sbjct: 292 ---------------------VILGFIQAAKRLKTL 306



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>AK068930:Os10g0358600 |
          Length = 302

 Score =  212 bits (540), Expect = 4e-55
 Identities = 113/205 (55%), Positives = 138/205 (67%), Gaps = 6/205 (2%)
 Frame = +3

Query: 342 GDEELTVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNAL 521
           G++E++VLPRHTKVVVTGNNRTKSVLVGL GVVKKAVGLGGWHWLVL NG+EVKLQRNAL
Sbjct: 100 GEDEMSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVGLGGWHWLVLTNGIEVKLQRNAL 159

Query: 522 SVLEAPTXXXXXXXXXXXXXSFCGSFDMGDKDMNYSSIEYQKPTKPRVRHTRPWS----- 686
           SV+E PT               C +      D+     +  KP + R R  R +      
Sbjct: 160 SVIEPPTGNEDDDKFD------CENMQWNSSDLASDDAQSPKPQRSRSRQHRGFQTKSFS 213

Query: 687 -SCTTTSSSRANLHSTSKLRARVNLTKLGTPTLWRYWKHFNLVSMNPSPSEEQLFHGVQQ 863
            S +  S S+A+  S+S+   +V+L+KL    LWRYW+HFNL   +P+PS EQL   VQ+
Sbjct: 214 RSMSCDSHSKASFSSSSRAHTKVDLSKLEMTALWRYWRHFNL-DASPNPSREQLVDAVQR 272

Query: 864 HFQSQQLDELQVILGFIQTAKRLKT 938
           HF SQQLDELQVI+GF+Q AKRLKT
Sbjct: 273 HFVSQQLDELQVIVGFVQAAKRLKT 297



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>Os12g0117800:Os12g0117800 |
          Length = 465

 Score = 35.8 bits (81), Expect = 0.074
 Identities = 18/40 (45%), Positives = 20/40 (50%)
 Frame = +1

Query: 289 WGPMSVLRGCCRCPATRAATRSSPCCPGTPRSSSPVTTGQ 408
           WG  S  R C   P    A RS+P  P +  SSSP  TGQ
Sbjct: 334 WGRRSRRRSCAAPPRRSRARRSAPPPPSSSSSSSPTATGQ 373



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>AK111023:Os01g0863500 |
          Length = 129

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 20/46 (43%), Positives = 21/46 (45%)
 Frame = +1

Query: 232 SAPSSEQSRDREAGEAV**WGPMSVLRGCCRCPATRAATRSSPCCP 369
           S  SSE S D   G A    GP  VL GC RC      +R  P CP
Sbjct: 66  SCVSSEGSPDAAGGGA----GPPMVLAGCPRCMMYVMLSREDPRCP 107



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>AK099945:Os01g0889900 |
          Length = 826

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 853 PWNSCSSDGLGFMLTRLKCFQYLHSVGVPSFVRFTL 746
           PW+S SS G  F++  + C  +LH    PS    T+
Sbjct: 12  PWSSSSSCGSPFLMMLISCLLWLHREAAPSLAADTV 47



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>AK110042: |
          Length = 1271

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 20/104 (19%)
 Frame = -2

Query: 545 ASWS----------LQDTQGIP----LQLHLHTI--LQNQPVPASKANSL----LDNTL* 426
           ASWS          L +TQ IP    L+LH  T    QN+P PA +  S+    +D+   
Sbjct: 682 ASWSSRGYDADHSQLGETQAIPKGVSLRLHKETTGTHQNKPSPAPEPASIHSEPIDSARE 741

Query: 425 ADQHGLCPVVTGDDDLGVPGQHGELLVAALVAGQRQHPRRTDIG 294
            D+H   P +    +  VP    + + A+  A       ++ +G
Sbjct: 742 VDRHSRIPPIPDLGEASVPANRADAMGASANAPLESQVSQSSVG 785



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>AK107335: |
          Length = 774

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
 Frame = +2

Query: 734 EAASESEPDKA---WNAH------TMEILEALQPCEHEPESVRGAAVPWGPAAFPVPAIG 886
           ++  ES+P+ +   WN H      T   L  L P  H P+ V   AVP     FP+P + 
Sbjct: 649 DSGDESDPEDSETPWNCHLVLGPTTRIPLGTLSPAPHHPKLVGQLAVP-----FPLPDL- 702

Query: 887 *VAGDPGVHPDG 922
                 G+ PDG
Sbjct: 703 ---SSTGLGPDG 711



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>AK111323:Os10g0137100 |
          Length = 131

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -2

Query: 425 ADQHGLCPVVTGDD-DLGVPGQHGELLVAALVAGQRQHPRRTDIGPHHHTASPAS 264
           AD  G C    GDD  L      G   V A  AG R+ P R D+     TA+PAS
Sbjct: 62  ADGDGGCSAARGDDLRLAATSVTGRAAVGA--AGSRRRPARGDVVWVRRTATPAS 114



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>AK063708:Os02g0530300 |
          Length = 154

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 256 RDREAGEAV**WGPMSVLRGCCRCPATRAATRSSPCCPGTPRSSSPVTTG 405
           RDR+  E+     P+ V      CPAT  ++ SS  CP    SS+    G
Sbjct: 36  RDRQGREST---APVVVAAAASACPATHPSSPSSSSCPAFLPSSTAAEAG 82



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>Os05g0520100:Os05g0520100 |
          Length = 353

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/63 (31%), Positives = 23/63 (36%)
 Frame = +1

Query: 226 SGSAPSSEQSRDREAGEAV**WGPMSVLRGCCRCPATRAATRSSPCCPGTPRSSSPVTTG 405
           + +A S   S DR  G A     P S + G    P         P  PGTP    P    
Sbjct: 93  AAAAASRSPSWDRSRGRAS---APGSPMDGVVEPPRKEVLALPPPPSPGTPAPPPPAAEA 149

Query: 406 QSP 414
           QSP
Sbjct: 150 QSP 152



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>AK107200:Os08g0158800 |
          Length = 167

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 322 RCPATRAATRSSPCCPGTPRSS-SPVTTGQSPCW 420
           + PA R+A+ S+  CP  P +  +P   G  PCW
Sbjct: 134 KLPAARSASVSAARCPPPPAALLAPALAGPPPCW 167



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>Os04g0280200:Os04g0280200 |
          Length = 951

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 541 VGASKTLRAFLCNFTSTPFFRTSQCQPPRPTAFLTTPCRPTSTD 410
           V  SK  +    +  S+PF  +S   PP P  FL +P  P + D
Sbjct: 35  VPTSKQAKQPTPSAASSPFLPSSALHPPPPPLFLPSPTSPPAMD 78



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>AK110069: |
          Length = 788

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +2

Query: 719 PSLDLEAASESEPDKAWNAHTMEILEALQPCEHEPESVRGAAVPWGPAAFPVPA 880
           PS    A++E+ P++  ++    +     P E    S  G   P GPA  P P+
Sbjct: 189 PSASPSASTEASPEQPSSSAPAGVPTPSAPAEVPTPSAPGVPTPSGPAGVPTPS 242



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>AK107386:Os08g0193900 |
          Length = 396

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 627 SSIEYQKPTKPRVRHTRPWSSCTTTSSSRANLHSTSKLRAR 749
           SS+    P KP+   T P S+ TTTS  R N     + R R
Sbjct: 43  SSLPNPNPHKPQPHPTIPSSTTTTTSGRRRNRRGRGRGRGR 83



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>AK106333:Os01g0575200 |
          Length = 391

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = -2

Query: 425 ADQHGLCPVVTGDDDLGVPGQHGELLVAALVAGQRQHPRRTDIGPHHHTASPASLSLLCS 246
           ADQ G  P V GD D G      E       AG+  H RR   G   H  SP +      
Sbjct: 234 ADQRGQVPQVAGDGDHGAGRDEHE-------AGE-AHRRRRRRGGRRHEGSPGA----AE 281

Query: 245 DEGADPE 225
            +GAD +
Sbjct: 282 GQGADQQ 288



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>AK062820:Os08g0565800 |
          Length = 175

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
 Frame = +1

Query: 31  SSHPAPAFPPDRSICSDPIRFHPIRTSKQLDWIGL-----RSSSP 150
           S HP PA PP  SI +     HP+  S+   W  L      SSSP
Sbjct: 9   SIHPPPAIPPIPSITNAAAEPHPLPPSRGRPWPPLLFLLPASSSP 53


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 35,314,252
Number of extensions: 781139
Number of successful extensions: 3198
Number of sequences better than 10.0: 17
Number of HSP's gapped: 3184
Number of HSP's successfully gapped: 17
Length of query: 460
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 356
Effective length of database: 11,235,591
Effective search space: 3999870396
Effective search space used: 3999870396
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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