ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf34f12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | D89726:Os04g0397000 | 211 | 2e-55 | 2 | AK063198:Os04g0397000 | 211 | 2e-55 | 3 | AK111048:Os03g0438900 | 30 | 0.94 | 4 | AK067596:Os03g0281800 | 30 | 0.94 | 5 | Os06g0484800:Os06g0484800 | 29 | 2.7 | 6 | AK120566:Os06g0218200 | 29 | 2.7 | 7 | AK105182:Os03g0438200 | 29 | 2.7 | 8 | Os03g0757700:Os03g0757700 | 28 | 3.6 | 9 | Os03g0131600:Os03g0131600 | 28 | 3.6 | 10 | AK073713:Os02g0712400 | 28 | 3.6 | 11 | Os08g0248500:Os08g0248500 | 28 | 4.7 | 12 | Os01g0753000:Os01g0753000 | 28 | 6.1 | 13 | AK069587:Os09g0569300 | 25 | 6.2 | 14 | Os09g0343500:Os09g0343500 | 27 | 8.0 | 15 | Os07g0621900:Os07g0621900 | 27 | 8.0 | 16 | AK121669: | 27 | 8.0 | 17 | AK120832: | 27 | 8.0 | 18 | AK108241: | 27 | 8.0 | 19 | AK068631:Os04g0475000 | 27 | 8.0 |
|---|
>D89726:Os04g0397000 | Length = 114 Score = 211 bits (538), Expect = 2e-55 Identities = 107/114 (93%), Positives = 109/114 (95%) Frame = +1 Query: 112 MPKAAGDAKLLIQSLNKAYAATPTNLKIIDLYVVFAVATALVQVVYMGIVGSFPFNSFLS 291 MP+A DAKLLIQSL KAYAATPTNLKIIDLYVVFAVATAL+QVVYMGIVGSFPFNSFLS Sbjct: 1 MPRATSDAKLLIQSLGKAYAATPTNLKIIDLYVVFAVATALIQVVYMGIVGSFPFNSFLS 60 Query: 292 GVLSSIGTAVLGVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 453 GVLS IGTAVL VCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG Sbjct: 61 GVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 114
>AK063198:Os04g0397000 | Length = 114 Score = 211 bits (538), Expect = 2e-55 Identities = 107/114 (93%), Positives = 109/114 (95%) Frame = +1 Query: 112 MPKAAGDAKLLIQSLNKAYAATPTNLKIIDLYVVFAVATALVQVVYMGIVGSFPFNSFLS 291 MP+A DAKLLIQSL KAYAATPTNLKIIDLYVVFAVATAL+QVVYMGIVGSFPFNSFLS Sbjct: 1 MPRATSDAKLLIQSLGKAYAATPTNLKIIDLYVVFAVATALIQVVYMGIVGSFPFNSFLS 60 Query: 292 GVLSSIGTAVLGVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 453 GVLS IGTAVL VCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG Sbjct: 61 GVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 114
>AK111048:Os03g0438900 | Length = 146 Score = 30.4 bits (67), Expect = 0.94 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = -3 Query: 154 GTGSGAWHRPRPSASLFPSSRARSHPHPAPCCAVLCWGRRRR 29 G GS + R RPS P S R+HP P P A C RR R Sbjct: 57 GYGSHSARRRRPSTHELPPSPLRAHPVP-PSPAPRCGTRRSR 97
>AK067596:Os03g0281800 | Length = 139 Score = 30.4 bits (67), Expect = 0.94 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -3 Query: 172 RRRPC*GTGSGAWHRPRPSASLFPSSRARSHPHPAPCCAV-LCWG 41 RR P GS W PR SA+L SSR R+ P CA WG Sbjct: 95 RRSPRYPAGSTRWRGPRRSAALPRSSRRRTPPAGLWSCATDARWG 139
>Os06g0484800:Os06g0484800 | Length = 1661 Score = 28.9 bits (63), Expect = 2.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 186 SQDH*PVRGFRRGHCPGSGCLHGNSWVIPL 275 S D + G+ GH P + L G++W+ PL Sbjct: 470 SIDSTALNGYWNGHMPAANALDGHNWMFPL 499
>AK120566:Os06g0218200 | Length = 515 Score = 28.9 bits (63), Expect = 2.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 186 SQDH*PVRGFRRGHCPGSGCLHGNSWVIPL 275 S D + G+ GH P + L G++W+ PL Sbjct: 8 SIDSTALNGYWNGHMPAANALDGHNWMFPL 37
>AK105182:Os03g0438200 | Length = 145 Score = 28.9 bits (63), Expect = 2.7 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +3 Query: 42 PQHSTAQHGAG*GWERAREEGNKDAEGRGRCQAPDPVPQQ 161 PQ Q G GW R RE+G + EG A D QQ Sbjct: 73 PQPQQQQATGGRGWIRRREQGREPNEGYDDLGADDEEQQQ 112
>Os03g0757700:Os03g0757700 | Length = 441 Score = 28.5 bits (62), Expect = 3.6 Identities = 27/80 (33%), Positives = 30/80 (37%) Frame = -3 Query: 304 TTGHQTGKS*RGMTQLFPCKQPEPGQWPRRKPRTGQ*S*DSWAWRRRPC*GTGSGAWHRP 125 TTG Q G G T+ C P +P T AWR A HR Sbjct: 223 TTGKQAG----GATKSGACGGRRP------QPPTA-------AWRSMS--SKAPRALHRR 263 Query: 124 RPSASLFPSSRARSHPHPAP 65 RPS S P +RS P P P Sbjct: 264 RPSRSTLPCLSSRSLPSPLP 283
>Os03g0131600:Os03g0131600 | Length = 1497 Score = 28.5 bits (62), Expect = 3.6 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = +3 Query: 63 HGAG*GWERAREEGNKDAEGRGRCQAPDPVPQQGLRR-HAHESQD----H*PVRGFRRGH 227 HG G G R R N + +GRGR P P +G RR H S D H V+ R Sbjct: 116 HGGG-GGPRDRAPANGNPDGRGRA-GGSPEPARGPRRQHGSLSPDQRHGHHGVQTVVRDF 173 Query: 228 CPGSG 242 PG G Sbjct: 174 GPGGG 178
>AK073713:Os02g0712400 | Length = 294 Score = 28.5 bits (62), Expect = 3.6 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = -3 Query: 172 RRRPC*GTGSGAWHRPRPSASLFPSSRARSHPHPAPCCAVLCWGRRRRADSD 17 RRR G RP A P+SR R P P P W RR +D D Sbjct: 138 RRRRLEGERGAGGGRP---ALTSPASRRRRCPRPDPASPGRIWPPRRHSDDD 186
>Os08g0248500:Os08g0248500 | Length = 1827 Score = 28.1 bits (61), Expect = 4.7 Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = +3 Query: 63 HGAG*G-WERAREEGNKDAEGRGRCQAPDPVPQQG-LRRHAHESQD----H*PVRGFRRG 224 HG G G +RA +GN D GRGR P P +G RRH S D H V+ R Sbjct: 115 HGGGGGPRDRAPADGNPD--GRGRA-GGSPEPARGPRRRHGSLSPDRRHGHHGVQTVVRD 171 Query: 225 HCPGSG 242 PG G Sbjct: 172 FGPGGG 177
>Os01g0753000:Os01g0753000 | Length = 617 Score = 27.7 bits (60), Expect = 6.1 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +3 Query: 30 RRLLPQHSTAQHGAG*GWERAREEGNKDAEGRGRCQAPDPVPQQGLRRHAHE 185 +R LP ++ G GW +R++ KD G R DP P H +E Sbjct: 444 QRSLPDYN------GRGWHESRKQVMKDFGGLKRSYYMDPQPSNSYEWHLYE 489
>AK069587:Os09g0569300 | Length = 273 Score = 24.6 bits (52), Expect(2) = 6.2 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +3 Query: 81 WERAREEGNKDAEGRGRCQAPDPVPQQGLRRHAHESQDH*P 203 W+R G++D+ G A D P L R + DH P Sbjct: 23 WKRCLHSGDRDSATWGLASADDFAPVPRLCRLIMANYDHHP 63 Score = 21.6 bits (44), Expect(2) = 6.2 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = +2 Query: 299 CRPLELQCLVFASVFKSTRTTRNSRISP 382 C PL+ +C+V + TR R++P Sbjct: 64 CHPLDARCVVRRRTYADTR----GRVTP 87
>Os09g0343500:Os09g0343500 | Length = 334 Score = 27.3 bits (59), Expect = 8.0 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Frame = -3 Query: 178 AWRRRPC*GTGSGAWHRPRPSASLFPSSRARSHPHPAPCCAVL-CWGRRRRADSD 17 A RRRP G R +A++ RA A C CW RRR D D Sbjct: 42 ARRRRPLAGAQEARRRRRSSAAAVTAGRRAGGEAATAGLCGGKECWPVRRRRDGD 96 Score = 27.3 bits (59), Expect = 8.0 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -3 Query: 226 WPRRKPRTGQ*S*DSWAWRRRPC*GTGSGAWHRPRPSASLFPSSR-ARSHPHPAPCCAVL 50 WP R+ R G AWR+RP GT GA + P+ R A+ P A Sbjct: 87 WPVRRRRDGD---RGPAWRQRPLAGTKGGA---AATAGQCGPARRGAQGRPQTNKAAATA 140 Query: 49 CWGRR 35 GRR Sbjct: 141 RHGRR 145
>Os07g0621900:Os07g0621900 | Length = 220 Score = 27.3 bits (59), Expect = 8.0 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = -3 Query: 175 WRRRPC*GTGSGAWHRPRPSASLFPSSRARSHPHPAPCCAVLCWGRRRRA 26 W RR G G +RP S +L + R S P P L RRR A Sbjct: 10 WSRRGGAAAGKGGANRPHRSHALPRARRCPSSLRPPPPIIALPASRRRSA 59
>AK121669: | Length = 242 Score = 27.3 bits (59), Expect = 8.0 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Frame = -3 Query: 256 FPCKQPEP-GQWPRRKPRTGQ*---S*DSWAWRRRPC*GTGSGAWHRPRPSASLFPSSRA 89 FP QP P + P R PRT Q + R G G P A PSS + Sbjct: 138 FPPPQPRPPARRPPRNPRTAQQVCARVPACVCLRAAAGGEGVRGVETP---ARHLPSSLS 194 Query: 88 RSHPHPAPCCAVLCWGRRRRADSDLRIA 5 + APC A GR + ADS +A Sbjct: 195 STIISGAPCPAAARLGREKGADSGRALA 222
>AK120832: | Length = 242 Score = 27.3 bits (59), Expect = 8.0 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Frame = -3 Query: 256 FPCKQPEP-GQWPRRKPRTGQ*---S*DSWAWRRRPC*GTGSGAWHRPRPSASLFPSSRA 89 FP QP P + P R PRT Q + R G G P A PSS + Sbjct: 138 FPPPQPRPPARRPPRNPRTAQQVCARVPACVCLRAAAGGEGVRGVETP---ARHLPSSLS 194 Query: 88 RSHPHPAPCCAVLCWGRRRRADSDLRIA 5 + APC A GR + ADS +A Sbjct: 195 STIISGAPCPAAARLGREKGADSGRALA 222
>AK108241: | Length = 273 Score = 27.3 bits (59), Expect = 8.0 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 21 ESARRLLPQHSTAQHGAG*GWERAREEGNKDAE 119 E AR LLP+ +TA H G G A G + AE Sbjct: 235 ERARTLLPRVATADHPGGLGVLDAHHPGGEHAE 267
>AK068631:Os04g0475000 | Length = 131 Score = 27.3 bits (59), Expect = 8.0 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 8/53 (15%) Frame = +3 Query: 42 PQHSTAQHGAG*GWERARE--------EGNKDAEGRGRCQAPDPVPQQGLRRH 176 P H A+H G G ER + A R R + P P+PQ +RRH Sbjct: 39 PSHQRAEHTGG-GGERGHRGCCGGSAPNPSSFAARRLRRRLPHPLPQHRIRRH 90 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,993,573 Number of extensions: 478338 Number of successful extensions: 1936 Number of sequences better than 10.0: 19 Number of HSP's gapped: 1915 Number of HSP's successfully gapped: 21 Length of query: 202 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 106 Effective length of database: 11,555,919 Effective search space: 1224927414 Effective search space used: 1224927414 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
