ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31f01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK060379:Os03g0111200 | 127 | 1e-29 | 2 | AK073955:Os10g0503800 | 84 | 9e-17 | 3 | AK106182:Os04g0533300 | 76 | 3e-14 | 4 | AK103947:Os04g0533300 | 76 | 3e-14 | 5 | AK065139:Os04g0533300 | 76 | 3e-14 | 6 | AK105194:Os02g0642200 | 65 | 6e-11 | 7 | AK104678:Os04g0533300 | 64 | 2e-10 | 8 | AK061351:Os04g0533300 | 64 | 2e-10 | 9 | AK111296:Os02g0824500 | 56 | 3e-08 | 10 | AK105718:Os05g0508700 | 30 | 2.8 | 11 | Os06g0216000:Os06g0216000 | 29 | 3.6 | 12 | AK111420:Os04g0653100 | 29 | 4.7 | 13 | AK070494:Os01g0740800 | 29 | 4.7 | 14 | AK067094:Os04g0653100 | 29 | 4.7 | 15 | Os11g0237900:Os11g0237900 | 28 | 8.0 |
|---|
>AK060379:Os03g0111200 | Length = 175 Score = 127 bits (318), Expect = 1e-29 Identities = 78/160 (48%), Positives = 87/160 (54%), Gaps = 7/160 (4%) Frame = +3 Query: 177 DIAEEKAIVPV-------HDDSKAIVAVVKDAEGTRGSSERDAYLTKIMSEKRTTLINAW 335 DIAEEKA+VP+ HDDSKAIV +VK+AE T GS+ERDAYL KI+SEKR LINAW Sbjct: 13 DIAEEKAVVPLPTPPATEHDDSKAIV-LVKEAEATGGSAERDAYLAKIVSEKRLVLINAW 71 Query: 336 EESEKARAENRAAKNLSFITSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLH 515 EESEKARAENRAAK LS+ITSW +LH Sbjct: 72 EESEKARAENRAAKKLSYITSWENAKKAEMEAELKRIEQELEKKKAAYEEKLKNKLALLH 131 Query: 516 KSXXXXXXXXXXXXXXXXXXXXXXXXKYRAKGEAPTKLFG 635 K+ KYRAKGEAPTKLFG Sbjct: 132 KTAEEKRALTTAKRGEELIMAEEMAAKYRAKGEAPTKLFG 171
>AK073955:Os10g0503800 | Length = 153 Score = 84.3 bits (207), Expect = 9e-17 Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 3/78 (3%) Frame = +3 Query: 177 DIAEEKAIVPVHDDSKAIVAVVKDAE---GTRGSSERDAYLTKIMSEKRTTLINAWEESE 347 DIAEE+A VP ++SKA+ VV DAE T GS ERDA LT + +EKR +LI AWEE+E Sbjct: 36 DIAEERAAVPAPEESKAMT-VVDDAEKAAATGGSHERDALLTTVATEKRISLIKAWEENE 94 Query: 348 KARAENRAAKNLSFITSW 401 KA+A+N+AAK L+ I SW Sbjct: 95 KAKADNKAAKKLADIASW 112
>AK106182:Os04g0533300 | Length = 206 Score = 76.3 bits (186), Expect = 3e-14 Identities = 53/171 (30%), Positives = 70/171 (40%), Gaps = 18/171 (10%) Frame = +3 Query: 177 DIAEEKAIVPVH-----------DDSKAIVAVVKDAE-------GTRGSSERDAYLTKIM 302 D+AEEKA++P DDSKA+ V K A+ GS++RD L ++ Sbjct: 32 DVAEEKAVIPAPAPPAEEEKPPVDDSKALAIVEKVADEPPAEKPAQGGSNDRDVALARVE 91 Query: 303 SEKRTTLINAWEESEKARAENRAAKNLSFITSWXXXXXXXXXXXXXXXXXXXXXXXXXXX 482 +EKR +LI AWEE+EK +AEN+A+K LS I SW Sbjct: 92 TEKRNSLIKAWEENEKTKAENKASKKLSAILSWENTKKANIEAQLKKIEEQLEKKKAEYA 151 Query: 483 XXXXXXXXMLHKSXXXXXXXXXXXXXXXXXXXXXXXXKYRAKGEAPTKLFG 635 ++HK KYRA G AP KL G Sbjct: 152 EKMKNKVAIVHKEAEEKRAMVEAKRGEEVLKAEEMAAKYRATGHAPKKLIG 202
>AK103947:Os04g0533300 | Length = 206 Score = 76.3 bits (186), Expect = 3e-14 Identities = 53/171 (30%), Positives = 70/171 (40%), Gaps = 18/171 (10%) Frame = +3 Query: 177 DIAEEKAIVPVH-----------DDSKAIVAVVKDAE-------GTRGSSERDAYLTKIM 302 D+AEEKA++P DDSKA+ V K A+ GS++RD L ++ Sbjct: 32 DVAEEKAVIPAPAPPAEEEKPPVDDSKALAIVEKVADEPPAEKPAQGGSNDRDVALARVE 91 Query: 303 SEKRTTLINAWEESEKARAENRAAKNLSFITSWXXXXXXXXXXXXXXXXXXXXXXXXXXX 482 +EKR +LI AWEE+EK +AEN+A+K LS I SW Sbjct: 92 TEKRNSLIKAWEENEKTKAENKASKKLSAILSWENTKKANIEAQLKKIEEQLEKKKAEYA 151 Query: 483 XXXXXXXXMLHKSXXXXXXXXXXXXXXXXXXXXXXXXKYRAKGEAPTKLFG 635 ++HK KYRA G AP KL G Sbjct: 152 EKMKNKVAIVHKEAEEKRAMVEAKRGEEVLKAEEMAAKYRATGHAPKKLIG 202
>AK065139:Os04g0533300 | Length = 206 Score = 76.3 bits (186), Expect = 3e-14 Identities = 53/171 (30%), Positives = 70/171 (40%), Gaps = 18/171 (10%) Frame = +3 Query: 177 DIAEEKAIVPVH-----------DDSKAIVAVVKDAE-------GTRGSSERDAYLTKIM 302 D+AEEKA++P DDSKA+ V K A+ GS++RD L ++ Sbjct: 32 DVAEEKAVIPAPAPPAEEEKPPVDDSKALAIVEKVADEPPAEKPAQGGSNDRDVALARVE 91 Query: 303 SEKRTTLINAWEESEKARAENRAAKNLSFITSWXXXXXXXXXXXXXXXXXXXXXXXXXXX 482 +EKR +LI AWEE+EK +AEN+A+K LS I SW Sbjct: 92 TEKRNSLIKAWEENEKTKAENKASKKLSAILSWENTKKANIEAQLKKIEEQLEKKKAEYA 151 Query: 483 XXXXXXXXMLHKSXXXXXXXXXXXXXXXXXXXXXXXXKYRAKGEAPTKLFG 635 ++HK KYRA G AP KL G Sbjct: 152 EKMKNKVAIVHKEAEEKRAMVEAKRGEEVLKAEEMAAKYRATGHAPKKLIG 202
>AK105194:Os02g0642200 | Length = 203 Score = 65.1 bits (157), Expect = 6e-11 Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 13/79 (16%) Frame = +3 Query: 204 PVHDDSKAIVAVVKD-------------AEGTRGSSERDAYLTKIMSEKRTTLINAWEES 344 P DDSKA+V V+ A TR S++RD L K+ ++KR +LI AWEE+ Sbjct: 43 PPADDSKALVVFVEKVADKPHAEKATATATPTRTSNDRDIALAKVETDKRESLIKAWEEN 102 Query: 345 EKARAENRAAKNLSFITSW 401 EKA+AENRA+K L I SW Sbjct: 103 EKAKAENRASKKLLDIISW 121
>AK104678:Os04g0533300 | Length = 209 Score = 63.5 bits (153), Expect = 2e-10 Identities = 41/131 (31%), Positives = 54/131 (41%) Frame = +3 Query: 243 KDAEGTRGSSERDAYLTKIMSEKRTTLINAWEESEKARAENRAAKNLSFITSWXXXXXXX 422 K A+G GS++RD L ++ +EKR +LI AWEE+EK +AEN+A+K LS I SW Sbjct: 77 KPAQG--GSNDRDVALARVETEKRNSLIKAWEENEKTKAENKASKKLSAILSWENTKKAN 134 Query: 423 XXXXXXXXXXXXXXXXXXXXXXXXXXXXMLHKSXXXXXXXXXXXXXXXXXXXXXXXXKYR 602 ++HK KYR Sbjct: 135 IEAQLKKIEEQLEKKKAEYAEKMKNKVAIVHKEAEEKRAMVEAKRGEEVLKAEEMAAKYR 194 Query: 603 AKGEAPTKLFG 635 A G AP KL G Sbjct: 195 ATGHAPKKLIG 205
>AK061351:Os04g0533300 | Length = 209 Score = 63.5 bits (153), Expect = 2e-10 Identities = 41/131 (31%), Positives = 54/131 (41%) Frame = +3 Query: 243 KDAEGTRGSSERDAYLTKIMSEKRTTLINAWEESEKARAENRAAKNLSFITSWXXXXXXX 422 K A+G GS++RD L ++ +EKR +LI AWEE+EK +AEN+A+K LS I SW Sbjct: 77 KPAQG--GSNDRDVALARVETEKRNSLIKAWEENEKTKAENKASKKLSAILSWENTKKAN 134 Query: 423 XXXXXXXXXXXXXXXXXXXXXXXXXXXXMLHKSXXXXXXXXXXXXXXXXXXXXXXXXKYR 602 ++HK KYR Sbjct: 135 IEAQLKKIEEQLEKKKAEYAEKMKNKVAIVHKEAEEKRAMVEAKRGEEVLKAEEMAAKYR 194 Query: 603 AKGEAPTKLFG 635 A G AP KL G Sbjct: 195 ATGHAPKKLIG 205
>AK111296:Os02g0824500 | Length = 179 Score = 56.2 bits (134), Expect = 3e-08 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 6/76 (7%) Frame = +3 Query: 192 KAIVPVHDDSKAIV------AVVKDAEGTRGSSERDAYLTKIMSEKRTTLINAWEESEKA 353 +A+ P D+ A+ A A GS +RDA L + E++ ++I AWEESEK+ Sbjct: 22 EAVKPAAGDAGAVTKTNGPSAPAGKAATPTGSVDRDAILANVELERKLSMIKAWEESEKS 81 Query: 354 RAENRAAKNLSFITSW 401 +AEN+A K +S I SW Sbjct: 82 KAENKAQKKMSSILSW 97
>AK105718:Os05g0508700 | Length = 734 Score = 29.6 bits (65), Expect = 2.8 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 510 ASRACSSASPCTLLSSFPVAPRSFSVRPPSPLPWRAP 400 AS CS ++P + P+ RS + P+P+P ++P Sbjct: 242 ASANCSKSTPVDMEKDVPLPSRSPQINKPAPVPPKSP 278
>Os06g0216000:Os06g0216000 | Length = 486 Score = 29.3 bits (64), Expect = 3.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 401 GARQGSGDGGRTEKDRGATGKEESSVQGEAEE 496 G R+G GD GR G G+EE+ + AEE Sbjct: 174 GGRRGGGDRGRGPPCAGEAGEEEAKIWCGAEE 205
>AK111420:Os04g0653100 | Length = 127 Score = 28.9 bits (63), Expect = 4.7 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +2 Query: 401 GARQGSGD--GGRTEKDRGATGKEESSVQGEAEEQ 499 GA GSG GG +EK RG G EE GE EE+ Sbjct: 64 GAGDGSGSGGGGDSEKPRGGGGDEE----GEGEEE 94
>AK070494:Os01g0740800 | Length = 124 Score = 28.9 bits (63), Expect = 4.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +2 Query: 401 GARQGSGDGGRTEKDRGATGKEESSVQGEAEEQARDAP 514 G G GDGGR + DR G + V + RDAP Sbjct: 22 GGVGGGGDGGRRQLDRVGGGGQGEGVGAGVGARHRDAP 59
>AK067094:Os04g0653100 | Length = 207 Score = 28.9 bits (63), Expect = 4.7 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +2 Query: 401 GARQGSGD--GGRTEKDRGATGKEESSVQGEAEEQ 499 GA GSG GG +EK RG G EE GE EE+ Sbjct: 64 GAGDGSGSGGGGDSEKPRGGGGDEE----GEGEEE 94
>Os11g0237900:Os11g0237900 | Length = 1039 Score = 28.1 bits (61), Expect = 8.0 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = +2 Query: 395 FMGARQGSGDGGRTEKDRGATGKEESSVQGEAEEQARD 508 F G+R G G+ G ++ G G+ SV E + R+ Sbjct: 36 FAGSRSGDGEAGERREEGGGGGRWSPSVSPWGERRGRE 73 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,848,455 Number of extensions: 336743 Number of successful extensions: 1549 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1541 Number of HSP's successfully gapped: 16 Length of query: 281 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 182 Effective length of database: 11,435,796 Effective search space: 2081314872 Effective search space used: 2081314872 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
