ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf28i07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001062251.1| Oryza sativa (japonica cultivar-group) Os05g... 486 e-134
2dbj|AB110169.1| Oryza sativa (japonica cultivar-group) mRNA for ... 486 e-134
3emb|CT828130.1| Oryza sativa (indica cultivar-group) cDNA clone:... 478 e-131
4dbj|AK063881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 478 e-131
5dbj|AK073600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116
6gb|DQ245316.1| Zea mays clone 14420 mRNA sequence 369 1e-98
7gb|BT016222.1| Zea mays clone Contig55 mRNA sequence 369 1e-98
8gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome... 210 6e-51
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 210 6e-51
10ref|NM_001051345.1| Oryza sativa (japonica cultivar-group) Os01g... 105 2e-19
11dbj|AK108159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
13dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
14dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
15ref|NM_001061302.1| Oryza sativa (japonica cultivar-group) Os05g... 58 5e-05
16gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 58 5e-05
17gb|AY594285.1| Oryza sativa (japonica cultivar group) LRR-like p... 58 5e-05
18gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome... 58 5e-05
19dbj|AK063611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 5e-05
20dbj|AK063609.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 5e-05
21gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 54 8e-04
22gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 48 0.049
23gb|AE005844.1| Caulobacter crescentus CB15 section 170 of 359 of... 46 0.19
24ref|NM_001054597.1| Oryza sativa (japonica cultivar-group) Os02g... 44 0.76
25emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 44 0.76
26gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome 44 0.76
27emb|CT983806.1| partial cDNA sequence from a Lambda ZAP II norma... 44 0.76
28emb|CT983105.1| partial cDNA sequence from a Lambda ZAP II norma... 44 0.76
29emb|CT982741.1| partial cDNA sequence from a Lambda ZAP II norma... 44 0.76
30emb|CT982606.1| partial cDNA sequence from a Lambda ZAP II norma... 44 0.76
31emb|CT981189.1| partial cDNA sequence from a Lambda ZAP II norma... 44 0.76
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.76
33dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.76
34dbj|AK099698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.76
35emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthe... 44 0.76
36emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromo... 42 3.0
37emb|CT832960.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 3.0
38ref|NM_001068980.1| Oryza sativa (japonica cultivar-group) Os08g... 42 3.0
39ref|NM_001063821.1| Oryza sativa (japonica cultivar-group) Os06g... 42 3.0
40ref|NM_001062507.1| Oryza sativa (japonica cultivar-group) Os05g... 42 3.0
41gb|CP000384.1| Mycobacterium sp. MCS, complete genome 42 3.0
42dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynt... 42 3.0
43gb|AY486719.1| Hevea brasiliensis clone gHbCIRA2436 microsatelli... 42 3.0
44gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 42 3.0
45gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome... 42 3.0
46gb|AE012290.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 3.0
47gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 3.0
48dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.0
49dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.0
50gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 3.0
51emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, co... 42 3.0
52emb|BX323577.16| Zebrafish DNA sequence from clone CH211-277N6 i... 42 3.0
53dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 3.0
54dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.0
55dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D... 42 3.0
56emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in ... 42 3.0
57dbj|AK070238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.0
58dbj|AP006077.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 3.0
59dbj|AK065325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.0
60dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.0
61gb|AY104688.1| Zea mays PCO061445 mRNA sequence 42 3.0
62gb|AF046931.1|AF046931 Thiobacillus denitrificans Rubisco operon... 42 3.0
63dbj|AB022919.1| Rhodopseudomonas palustris psb operon genes for ... 42 3.0

>ref|NM_001062251.1| Oryza sativa (japonica cultivar-group) Os05g0453700 (Os05g0453700)
           mRNA, complete cds
          Length = 834
 Score =  486 bits (245), Expect = e-134
 Identities = 412/465 (88%), Gaps = 2/465 (0%)
 Strand = Plus / Plus

                                                                       
Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191
           ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 163 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 222

                                                                       
Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251
           ||| ||   |||||||||||||||||||||  | |||||||||||||||||||||  |||
Sbjct: 223 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 282

                                                                       
Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311
           |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || 
Sbjct: 283 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 342

                                                                       
Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371
           || ||||||||||| |||  || |||| || | ||||||||   ||||||||||||||||
Sbjct: 343 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 402

                                                                       
Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431
           ||||||||||||||||| || ||||||||| | ||||| |  || |||||||||||||||
Sbjct: 403 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 462

                                                                       
Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491
           ||||||||||||||||||||||||||||| || || ||||||||||||||||||||  ||
Sbjct: 463 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 522

                                                                       
Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550
           ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| ||
Sbjct: 523 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 581

                                                        
Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595
           ||||||| |||| ||||| || |||||||| |||||||| |||||
Sbjct: 582 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 626



to top

>dbj|AB110169.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 12YPG019
          Length = 782

 Score =  486 bits (245), Expect = e-134
 Identities = 412/465 (88%), Gaps = 2/465 (0%)
 Strand = Plus / Plus

                                                                       
Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191
           ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 111 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 170

                                                                       
Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251
           ||| ||   |||||||||||||||||||||  | |||||||||||||||||||||  |||
Sbjct: 171 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 230

                                                                       
Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311
           |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || 
Sbjct: 231 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 290

                                                                       
Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371
           || ||||||||||| |||  || |||| || | ||||||||   ||||||||||||||||
Sbjct: 291 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 350

                                                                       
Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431
           ||||||||||||||||| || ||||||||| | ||||| |  || |||||||||||||||
Sbjct: 351 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 410

                                                                       
Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491
           ||||||||||||||||||||||||||||| || || ||||||||||||||||||||  ||
Sbjct: 411 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 470

                                                                       
Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550
           ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| ||
Sbjct: 471 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 529

                                                        
Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595
           ||||||| |||| ||||| || |||||||| |||||||| |||||
Sbjct: 530 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 574



to top

>emb|CT828130.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123A02, full
           insert sequence
          Length = 1058

 Score =  478 bits (241), Expect = e-131
 Identities = 411/465 (88%), Gaps = 2/465 (0%)
 Strand = Plus / Plus

                                                                       
Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191
           ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 394 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 453

                                                                       
Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251
           ||| ||   |||||||||||||||||||||  | |||||||||||||||||||||  |||
Sbjct: 454 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 513

                                                                       
Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311
           |||||||||||||||||||||||| | || | |||||||||||||||||||||||| || 
Sbjct: 514 ggcggggaggaggccaagcacgccctgtgtggcaagtccggatccccgctgatccctctc 573

                                                                       
Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371
           || ||||||||||| |||  || |||| || | ||||||||   ||||||||||||||||
Sbjct: 574 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 633

                                                                       
Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431
           ||||||||||||||||| || ||||||||| | ||||| |  || |||||||||||||||
Sbjct: 634 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 693

                                                                       
Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491
           ||||||||||||||||||||||||||||| || || ||||||||||||||||||||  ||
Sbjct: 694 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 753

                                                                       
Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550
           ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| ||
Sbjct: 754 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 812

                                                        
Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595
           ||||||| |||| ||||| || |||||||| |||||||| |||||
Sbjct: 813 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 857



to top

>dbj|AK063881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-F08, full
           insert sequence
          Length = 834

 Score =  478 bits (241), Expect = e-131
 Identities = 411/465 (88%), Gaps = 2/465 (0%)
 Strand = Plus / Plus

                                                                       
Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191
           ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 163 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 222

                                                                       
Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251
           ||| ||   |||||||||||||||||||||  | |||||||||||||||||||||  |||
Sbjct: 223 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 282

                                                                       
Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311
           |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || 
Sbjct: 283 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 342

                                                                       
Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371
           || ||||||||||| |||  || |||| || | ||||||||   ||||||||||||||||
Sbjct: 343 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 402

                                                                       
Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431
           ||||||||||||||||| || ||||||||| | ||||| |  || |||||||||||| ||
Sbjct: 403 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctggac 462

                                                                       
Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491
           ||||||||||||||||||||||||||||| || || ||||||||||||||||||||  ||
Sbjct: 463 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 522

                                                                       
Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550
           ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| ||
Sbjct: 523 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 581

                                                        
Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595
           ||||||| |||| ||||| || |||||||| |||||||| |||||
Sbjct: 582 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 626



to top

>dbj|AK073600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I03, full
           insert sequence
          Length = 2257

 Score =  426 bits (215), Expect = e-116
 Identities = 341/383 (89%)
 Strand = Plus / Plus

                                                                       
Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191
           ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 166 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 225

                                                                       
Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251
           ||| ||   |||||||||||||||||||||  | |||||||||||||||||||||  |||
Sbjct: 226 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 285

                                                                       
Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311
           |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || 
Sbjct: 286 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 345

                                                                       
Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371
           || ||||||||||| |||  || |||| || | ||||||||   ||||||||||||||||
Sbjct: 346 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 405

                                                                       
Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431
           ||||||||||||||||| || ||||||||| | ||||| |  || |||||||||||||||
Sbjct: 406 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 465

                                                                       
Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491
           ||||||||||||||||||||||||||||| || || ||||||||||||||||||||  ||
Sbjct: 466 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 525

                                  
Query: 492 gtcatgggcagccacggcctcgg 514
           ||||||||||||| |||||||||
Sbjct: 526 gtcatgggcagccgcggcctcgg 548



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                        
Query: 525  aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584
            ||||||||||| || |||||||| ||||||||| |||| ||||| || |||||||| |||
Sbjct: 1979 aggattcttctggggagtgtgacaaactacgtgctgtcaaacgcatcatgccctgtaaca 2038

                       
Query: 585  gtcgtgaaggg 595
            ||||| |||||
Sbjct: 2039 gtcgtcaaggg 2049



to top

>gb|DQ245316.1| Zea mays clone 14420 mRNA sequence
          Length = 803

 Score =  369 bits (186), Expect = 1e-98
 Identities = 399/470 (84%)
 Strand = Plus / Plus

                                                                       
Query: 126 gacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
           ||||||||||| |||||||||||||| || |||||||||| ||||  ||||  |||||||
Sbjct: 96  gacggggagcgcaggatcggggtggccatcgactactcggagagcgccaagaaggcgctg 155

                                                                       
Query: 186 gagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctg 245
           || |||||| || | |||||||||| ||  || |||||| |||||||| |||||||||||
Sbjct: 156 gactgggccatcgacaacctgctccaccacggggacaccctcgtcgtcgtccacgtcctg 215

                                                                       
Query: 246 cgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatc 305
           | |||||||| ||||||| |||||||| |  |||||||||||||||||||||||||||||
Sbjct: 216 caccacggcgcggaggagaccaagcacacgctctgggccaagtccggatccccgctgatc 275

                                                                       
Query: 306 cccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgcc 365
           || || || |||||||||||||| ||||||||| ||  |||||||||   |  |||||||
Sbjct: 276 ccactctccgagttccgggagcccgaggtgatgcagggctacggcgtgcgccccgacgcc 335

                                                                       
Query: 366 gaggtgctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaag 425
           ||||||||||||  | ||||||| || |||||||||    |||| |||||||||||||||
Sbjct: 336 gaggtgctcgacgcgatcgacacggcagcgcgccagaagcagctgaaggtggtggcgaag 395

                                                                       
Query: 426 ctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgac 485
           ||||||||||||||||||||||||||||||||||| || || ||||| |  | |||||| 
Sbjct: 396 ctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggatctcaggatcgat 455

                                                                       
Query: 486 accatcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtg 545
            || |||||||||| || | ||||||||| |  |||||||||||||| || ||||| |||
Sbjct: 456 tccctcgtcatgggtagtcgcggcctcggcccgatccagaggattctcctgggaagcgtg 515

                                                             
Query: 546 accaactacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595
           || ||||||||| |||| ||||| |||||||| ||||||||||| |||||
Sbjct: 516 acaaactacgtgctgtcaaacgcatcgtgcccggtgacagtcgtcaaggg 565



to top

>gb|BT016222.1| Zea mays clone Contig55 mRNA sequence
          Length = 892

 Score =  369 bits (186), Expect = 1e-98
 Identities = 399/470 (84%)
 Strand = Plus / Plus

                                                                       
Query: 126 gacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
           ||||||||||| |||||||||||||| || |||||||||| ||||  ||||  |||||||
Sbjct: 96  gacggggagcgcaggatcggggtggccatcgactactcggagagcgccaagaaggcgctg 155

                                                                       
Query: 186 gagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctg 245
           || |||||| || | |||||||||| ||  || |||||| |||||||| |||||||||||
Sbjct: 156 gactgggccatcgacaacctgctccaccacggggacaccctcgtcgtcgtccacgtcctg 215

                                                                       
Query: 246 cgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatc 305
           | |||||||| ||||||| |||||||| |  |||||||||||||||||||||||||||||
Sbjct: 216 caccacggcgcggaggagaccaagcacacgctctgggccaagtccggatccccgctgatc 275

                                                                       
Query: 306 cccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgcc 365
           || || || |||||||||||||| ||||||||| ||  |||||||||   |  |||||||
Sbjct: 276 ccactctccgagttccgggagcccgaggtgatgcagggctacggcgtgcgccccgacgcc 335

                                                                       
Query: 366 gaggtgctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaag 425
           ||||||||||||  | ||||||| || |||||||||    |||| |||||||||||||||
Sbjct: 336 gaggtgctcgacgcgatcgacacggcagcgcgccagaagcagctgaaggtggtggcgaag 395

                                                                       
Query: 426 ctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgac 485
           ||||||||||||||||||||||||||||||||||| || || ||||| |  |||||||| 
Sbjct: 396 ctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggacctcaagatcgat 455

                                                                       
Query: 486 accatcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtg 545
            || |||||||||| || |  |||||||| |  |||||||||||||| || ||||| |||
Sbjct: 456 tccctcgtcatgggtagtcggggcctcggcccgatccagaggattctcctgggaagcgtg 515

                                                             
Query: 546 accaactacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595
           || ||||||||| |||| ||||| |||||||| ||||||||||| |||||
Sbjct: 516 acaaactacgtgctgtcaaacgcatcgtgcccggtgacagtcgtcaaggg 565



to top

>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01,
             complete sequence
          Length = 112761

 Score =  210 bits (106), Expect = 6e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                         
Query: 132   gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191
             ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 85281 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 85340

                                                                         
Query: 192   gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251
             ||| ||   |||||||||||||||||||||  | |||||||||||||||||||||  |||
Sbjct: 85341 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 85400

                                                           
Query: 252   ggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297
             |||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct: 85401 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccc 85446



 Score =  147 bits (74), Expect = 7e-32
 Identities = 92/98 (93%)
 Strand = Plus / Plus

                                                                         
Query: 417   gtggcgaagctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcag 476
             |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 85756 gtggcgaagctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggagcag 85815

                                                   
Query: 477   aagatcgacaccatcgtcatgggcagccacggcctcgg 514
             |||||||||||  ||||||||||||||| |||||||||
Sbjct: 85816 aagatcgacacgctcgtcatgggcagccgcggcctcgg 85853



 Score = 87.7 bits (44), Expect = 6e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                         
Query: 298   cgctgatccccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacct 357
             |||||||||| || || ||||||||||| |||  || |||| || | ||||||||   ||
Sbjct: 85544 cgctgatccctctctccgagttccgggatccgacggcgatgcagcagtacggcgtgcact 85603

                                                         
Query: 358   gcgacgccgaggtgctcgacatgctcgacaccgccgcgcgccag 401
             ||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 85604 gcgacgccgaggtgctcgacatgctcgacacggcggcgcgccag 85647



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 525   aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584
             ||||||||||| || |||||||| ||||||||| |||| ||||| || |||||||| |||
Sbjct: 87283 aggattcttctggggagtgtgacaaactacgtgctgtcaaacgcatcatgccctgtaaca 87342

                        
Query: 585   gtcgtgaaggg 595
             ||||| |||||
Sbjct: 87343 gtcgtcaaggg 87353



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  210 bits (106), Expect = 6e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                            
Query: 132      gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191
                ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 22131300 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 22131359

                                                                            
Query: 192      gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251
                ||| ||   |||||||||||||||||||||  | |||||||||||||||||||||  |||
Sbjct: 22131360 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 22131419

                                                              
Query: 252      ggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297
                |||||||||||||||||||||||| | |||| ||||||||||||||
Sbjct: 22131420 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccc 22131465



 Score =  147 bits (74), Expect = 7e-32
 Identities = 92/98 (93%)
 Strand = Plus / Plus

                                                                            
Query: 417      gtggcgaagctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcag 476
                |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 22131775 gtggcgaagctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggagcag 22131834

                                                      
Query: 477      aagatcgacaccatcgtcatgggcagccacggcctcgg 514
                |||||||||||  ||||||||||||||| |||||||||
Sbjct: 22131835 aagatcgacacgctcgtcatgggcagccgcggcctcgg 22131872



 Score = 87.7 bits (44), Expect = 6e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                            
Query: 298      cgctgatccccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacct 357
                |||||||||| || || ||||||||||| |||  || |||| || | ||||||||   ||
Sbjct: 22131563 cgctgatccctctctccgagttccgggatccgacggcgatgcagcagtacggcgtgcact 22131622

                                                            
Query: 358      gcgacgccgaggtgctcgacatgctcgacaccgccgcgcgccag 401
                ||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 22131623 gcgacgccgaggtgctcgacatgctcgacacggcggcgcgccag 22131666



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                            
Query: 525      aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584
                ||||||||||| || |||||||| ||||||||| |||| ||||| || |||||||| |||
Sbjct: 22133302 aggattcttctggggagtgtgacaaactacgtgctgtcaaacgcatcatgccctgtaaca 22133361

                           
Query: 585      gtcgtgaaggg 595
                ||||| |||||
Sbjct: 22133362 gtcgtcaaggg 22133372



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                            
Query: 141     atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
               ||||||||||||||||||| ||||||| ||||||||  |||||||
Sbjct: 4146691 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 4146735



 Score = 48.1 bits (24), Expect = 0.049
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 412     aggtggtggcgaagctgtactggggcga 439
               |||||||||||||| |||||||||||||
Sbjct: 4147634 aggtggtggcgaaggtgtactggggcga 4147661



 Score = 42.1 bits (21), Expect = 3.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 227     cgtcgtcctccacgtcctgcgccacggcg 255
               ||||||||||| |||||| ||||||||||
Sbjct: 2268891 cgtcgtcctcctcgtcctccgccacggcg 2268863



 Score = 42.1 bits (21), Expect = 3.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 207      ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243
                ||||||| ||||||| |||||||  ||||||||||||
Sbjct: 24551368 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 24551404



to top

>ref|NM_001051345.1| Oryza sativa (japonica cultivar-group) Os01g0849600 (Os01g0849600)
           mRNA, complete cds
          Length = 799

 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                       
Query: 490 tcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtgacca 549
           |||||||||||||||  |||||||| |  |||||||||||||| || ||||||||||| |
Sbjct: 464 tcgtcatgggcagccgtggcctcggccagatccagaggattctgctgggaagtgtgacta 523

                                                        
Query: 550 actacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaagg 594
           |||||||| ||||||| ||||| ||||||||||| ||||| ||||
Sbjct: 524 actacgtgctgtcgaatgcgtcttgccctgtgaccgtcgtcaagg 568



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 155/190 (81%)
 Strand = Plus / Plus

                                                                       
Query: 118 cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177
           |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| 
Sbjct: 92  cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 151

                                                                       
Query: 178 gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237
            ||||||| ||||||| | | | ||||| ||||||  |||||||||| ||||| ||||||
Sbjct: 152 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 211

                                                                       
Query: 238 acgtcctgcgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297
           || ||| || ||||||| | || ||||||||| ||| | ||||| |  |  ||||||| |
Sbjct: 212 acatccggcaccacggccgcgacgaggccaagaacgtcctctggtctcacaccggatcac 271

                     
Query: 298 cgctgatccc 307
           ||||||||||
Sbjct: 272 cgctgatccc 281



to top

>dbj|AK108159.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G10, full
           insert sequence
          Length = 799

 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                       
Query: 490 tcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtgacca 549
           |||||||||||||||  |||||||| |  |||||||||||||| || ||||||||||| |
Sbjct: 464 tcgtcatgggcagccgtggcctcggccagatccagaggattctgctgggaagtgtgacta 523

                                                        
Query: 550 actacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaagg 594
           |||||||| ||||||| ||||| ||||||||||| ||||| ||||
Sbjct: 524 actacgtgctgtcgaatgcgtcttgccctgtgaccgtcgtcaagg 568



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 155/190 (81%)
 Strand = Plus / Plus

                                                                       
Query: 118 cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177
           |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| 
Sbjct: 92  cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 151

                                                                       
Query: 178 gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237
            ||||||| ||||||| | | | ||||| ||||||  |||||||||| ||||| ||||||
Sbjct: 152 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 211

                                                                       
Query: 238 acgtcctgcgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297
           || ||| || ||||||| | || ||||||||| ||| | ||||| |  |  ||||||| |
Sbjct: 212 acatccggcaccacggccgcgacgaggccaagaacgtcctctggtctcacaccggatcac 271

                     
Query: 298 cgctgatccc 307
           ||||||||||
Sbjct: 272 cgctgatccc 281



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                            
Query: 118      cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177
                |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| 
Sbjct: 36491300 cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 36491241

                                                                            
Query: 178      gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237
                 ||||||| ||||||| | | | ||||| ||||||  |||||||||| ||||| ||||||
Sbjct: 36491240 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 36491181

                                                
Query: 238      acgtcctgcgccacggcggggaggaggccaag 269
                || ||| || ||||||| | || |||||||||
Sbjct: 36491180 acatccggcaccacggccgcgacgaggccaag 36491149



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 525      aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584
                |||||||| || ||||||||||| ||||||||| ||||||| ||||| ||||||||||| 
Sbjct: 36490493 aggattctgctgggaagtgtgactaactacgtgctgtcgaatgcgtcttgccctgtgacc 36490434

                          
Query: 585      gtcgtgaagg 594
                ||||| ||||
Sbjct: 36490433 gtcgtcaagg 36490424



to top

>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0414E03
          Length = 139598

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/152 (82%)
 Strand = Plus / Minus

                                                                        
Query: 118  cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177
            |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| 
Sbjct: 4675 cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 4616

                                                                        
Query: 178  gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237
             ||||||| ||||||| | | | ||||| ||||||  |||||||||| ||||| ||||||
Sbjct: 4615 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 4556

                                            
Query: 238  acgtcctgcgccacggcggggaggaggccaag 269
            || ||| || ||||||| | || |||||||||
Sbjct: 4555 acatccggcaccacggccgcgacgaggccaag 4524



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                        
Query: 525  aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584
            |||||||| || ||||||||||| ||||||||| ||||||| ||||| ||||||||||| 
Sbjct: 3868 aggattctgctgggaagtgtgactaactacgtgctgtcgaatgcgtcttgccctgtgacc 3809

                      
Query: 585  gtcgtgaagg 594
            ||||| ||||
Sbjct: 3808 gtcgtcaagg 3799



to top

>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0005H10
          Length = 142885

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                          
Query: 525    aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584
              |||||||| || ||||||||||| ||||||||| ||||||| ||||| ||||||||||| 
Sbjct: 142332 aggattctgctgggaagtgtgactaactacgtgctgtcgaatgcgtcttgccctgtgacc 142273

                        
Query: 585    gtcgtgaagg 594
              ||||| ||||
Sbjct: 142272 gtcgtcaagg 142263



to top

>ref|NM_001061302.1| Oryza sativa (japonica cultivar-group) Os05g0170200 (Os05g0170200)
           mRNA, partial cds
          Length = 773

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
           ||||||||||||||||||| ||||||| ||||||||  |||||||
Sbjct: 139 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 183



 Score = 48.1 bits (24), Expect = 0.049
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 412 aggtggtggcgaagctgtactggggcga 439
           |||||||||||||| |||||||||||||
Sbjct: 413 aggtggtggcgaaggtgtactggggcga 440



to top

>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 141   atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
             ||||||||||||||||||| ||||||| ||||||||  |||||||
Sbjct: 33170 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 33214



 Score = 48.1 bits (24), Expect = 0.049
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 412   aggtggtggcgaagctgtactggggcga 439
             |||||||||||||| |||||||||||||
Sbjct: 34113 aggtggtggcgaaggtgtactggggcga 34140



to top

>gb|AY594285.1| Oryza sativa (japonica cultivar group) LRR-like protein mRNA,
           complete cds
          Length = 666

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
           ||||||||||||||||||| ||||||| ||||||||  |||||||
Sbjct: 12  atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 56



 Score = 48.1 bits (24), Expect = 0.049
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 412 aggtggtggcgaagctgtactggggcga 439
           |||||||||||||| |||||||||||||
Sbjct: 287 aggtggtggcgaaggtgtactggggcga 314



to top

>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04,
              complete sequence
          Length = 136713

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 141    atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
              ||||||||||||||||||| ||||||| ||||||||  |||||||
Sbjct: 121385 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 121429



 Score = 48.1 bits (24), Expect = 0.049
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 412    aggtggtggcgaagctgtactggggcga 439
              |||||||||||||| |||||||||||||
Sbjct: 122328 aggtggtggcgaaggtgtactggggcga 122355



to top

>dbj|AK063611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D04, full
           insert sequence
          Length = 773

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
           ||||||||||||||||||| ||||||| ||||||||  |||||||
Sbjct: 139 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 183



 Score = 48.1 bits (24), Expect = 0.049
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 412 aggtggtggcgaagctgtactggggcga 439
           |||||||||||||| |||||||||||||
Sbjct: 413 aggtggtggcgaaggtgtactggggcga 440



to top

>dbj|AK063609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D02, full
           insert sequence
          Length = 512

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185
           ||||||||||||||||||| ||||||| ||||||||  |||||||
Sbjct: 147 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 191



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 99      agcgcgatggccggcggcgcggacgcggacgggga 133
               |||||||||||||||||||||| || |||||||||
Sbjct: 2165796 agcgcgatggccggcggcgcgggcggggacgggga 2165762



to top

>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 48.1 bits (24), Expect = 0.049
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 98      cagcgcgatggccggcggcgcggacgcg 125
               |||||||| |||||||||||||||||||
Sbjct: 5368435 cagcgcgaaggccggcggcgcggacgcg 5368462



to top

>gb|AE005844.1| Caulobacter crescentus CB15 section 170 of 359 of the complete
           genome
          Length = 11698

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 98  cagcgcgatggccggcggcgcgg 120
           |||||||||||||||||||||||
Sbjct: 668 cagcgcgatggccggcggcgcgg 646



to top

>ref|NM_001054597.1| Oryza sativa (japonica cultivar-group) Os02g0738600 (Os02g0738600)
            mRNA, complete cds
          Length = 1978

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 110  cggcggcgcggacgcggacggggagcggag 139
            |||||||||||||||| ||| |||||||||
Sbjct: 1189 cggcggcgcggacgcgaacgtggagcggag 1218



to top

>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 176     gcgggcgctggagtgggccgtc 197
               ||||||||||||||||||||||
Sbjct: 4738010 gcgggcgctggagtgggccgtc 4738031



to top

>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome
          Length = 9139763

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 476     gaagatcgacaccatcgtcatg 497
               ||||||||||||||||||||||
Sbjct: 1140601 gaagatcgacaccatcgtcatg 1140580



to top

>emb|CT983806.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 789

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 421 cgaagctgtactggggcgacgccagggagaagct 454
           |||||||||||||||| || || |||||||||||
Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420



to top

>emb|CT983105.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 790

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 421 cgaagctgtactggggcgacgccagggagaagct 454
           |||||||||||||||| || || |||||||||||
Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420



to top

>emb|CT982741.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 789

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 421 cgaagctgtactggggcgacgccagggagaagct 454
           |||||||||||||||| || || |||||||||||
Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420



to top

>emb|CT982606.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 791

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 421 cgaagctgtactggggcgacgccagggagaagct 454
           |||||||||||||||| || || |||||||||||
Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420



to top

>emb|CT981189.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 793

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 421 cgaagctgtactggggcgacgccagggagaagct 454
           |||||||||||||||| || || |||||||||||
Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 110      cggcggcgcggacgcggacggggagcggag 139
                |||||||||||||||| ||| |||||||||
Sbjct: 30860293 cggcggcgcggacgcgaacgtggagcggag 30860322



to top

>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684F11
          Length = 147731

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 110   cggcggcgcggacgcggacggggagcggag 139
             |||||||||||||||| ||| |||||||||
Sbjct: 43870 cggcggcgcggacgcgaacgtggagcggag 43899



to top

>dbj|AK099698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K14, full
            insert sequence
          Length = 1980

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 110  cggcggcgcggacgcggacggggagcggag 139
            |||||||||||||||| ||| |||||||||
Sbjct: 1191 cggcggcgcggacgcgaacgtggagcggag 1220



to top

>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster
            region
          Length = 43220

 Score = 44.1 bits (22), Expect = 0.76
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 457  gcgatgcggtggaggagcagaagatc 482
            |||| |||||||||||||||||||||
Sbjct: 1946 gcgacgcggtggaggagcagaagatc 1921



to top

>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm
          Length = 1367119

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    gcgggcgctggagtgggccgt 196
              |||||||||||||||||||||
Sbjct: 323620 gcgggcgctggagtgggccgt 323640



to top

>emb|CT832960.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA233C22, full
            insert sequence
          Length = 2057

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 107  ggccggcggcgcggacgcggacggggagcggag 139
            ||||||||||||||||||  ||| |||||||||
Sbjct: 1204 ggccggcggcgcggacgccaacgtggagcggag 1236



to top

>ref|NM_001068980.1| Oryza sativa (japonica cultivar-group) Os08g0550200 (Os08g0550200)
           mRNA, complete cds
          Length = 1935

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 agcggaggatcggggtggcga 153
           |||||||||||||||||||||
Sbjct: 591 agcggaggatcggggtggcga 571



to top

>ref|NM_001063821.1| Oryza sativa (japonica cultivar-group) Os06g0247900 (Os06g0247900)
           mRNA, partial cds
          Length = 1592

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 107 ggccggcggcgcggacgcggacggggagcggag 139
           ||||||||||||||||||  ||| |||||||||
Sbjct: 742 ggccggcggcgcggacgccaacgtggagcggag 774



to top

>ref|NM_001062507.1| Oryza sativa (japonica cultivar-group) Os05g0501700 (Os05g0501700)
           mRNA, complete cds
          Length = 1117

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 207 ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243
           ||||||| ||||||| |||||||  ||||||||||||
Sbjct: 333 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 369



to top

>gb|CP000384.1| Mycobacterium sp. MCS, complete genome
          Length = 5705448

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 333    gtgatgaagaactacggcgtc 353
              |||||||||||||||||||||
Sbjct: 695468 gtgatgaagaactacggcgtc 695488



to top

>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster,
             partial and complete cds
          Length = 113234

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   cggcgcggacgcggacgggga 133
             |||||||||||||||||||||
Sbjct: 40924 cggcgcggacgcggacgggga 40944



to top

>gb|AY486719.1| Hevea brasiliensis clone gHbCIRA2436 microsatellite sequence
          Length = 483

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 136 ggaggatcggggtggcgatggactactcggcgagcagcaag 176
           ||||||| || || || ||||||| ||||||||||||||||
Sbjct: 286 ggaggataggtgtagccatggacttctcggcgagcagcaag 326



to top

>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 207   ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243
             ||||||| ||||||| |||||||  ||||||||||||
Sbjct: 65550 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 65586



to top

>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13,
              complete sequence
          Length = 126332

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 227    cgtcgtcctccacgtcctgcgccacggcg 255
              ||||||||||| |||||| ||||||||||
Sbjct: 101322 cgtcgtcctcctcgtcctccgccacggcg 101294



to top

>gb|AE012290.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 198
            of 460 of the complete genome
          Length = 11880

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 374  cgacatgctcgacaccgccgcgcgccagctcga 406
            ||||||||||| || || |||||||||||||||
Sbjct: 3155 cgacatgctcggcagcggcgcgcgccagctcga 3123



to top

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 362     cgccgaggtgctcgacatgct 382
               |||||||||||||||||||||
Sbjct: 2714830 cgccgaggtgctcgacatgct 2714850



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 133      agcggaggatcggggtggcga 153
                |||||||||||||||||||||
Sbjct: 27587392 agcggaggatcggggtggcga 27587412



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 107     ggccggcggcgcggacgcggacggggagcggag 139
               ||||||||||||||||||  ||| |||||||||
Sbjct: 7682924 ggccggcggcgcggacgccaacgtggagcggag 7682892



to top

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 374     cgacatgctcgacaccgccgcgcgccagctcga 406
               ||||||||||| || || |||||||||||||||
Sbjct: 2796697 cgacatgctcggcagcggcgcgcgccagctcga 2796729



to top

>emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              2/8
          Length = 341553

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    ggcgacaccgtcgtcgtcctc 236
              |||||||||||||||||||||
Sbjct: 274239 ggcgacaccgtcgtcgtcctc 274219



to top

>emb|BX323577.16| Zebrafish DNA sequence from clone CH211-277N6 in linkage group 24,
             complete sequence
          Length = 55628

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   ccgaggtgctcgacatgctcg 384
             |||||||||||||||||||||
Sbjct: 23775 ccgaggtgctcgacatgctcg 23795



to top

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 489     atcgtcatgggcagccacggcctcggtct 517
               |||||||||||||||| ||| ||||||||
Sbjct: 1561508 atcgtcatgggcagccgcggactcggtct 1561480



to top

>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1136_C11
          Length = 124827

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 107    ggccggcggcgcggacgcggacggggagcggag 139
              ||||||||||||||||||  ||| |||||||||
Sbjct: 106179 ggccggcggcgcggacgccaacgtggagcggag 106147



to top

>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   agcggaggatcggggtggcga 153
             |||||||||||||||||||||
Sbjct: 69682 agcggaggatcggggtggcga 69702



to top

>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17,
              complete sequence
          Length = 247607

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 364    ccgaggtgctcgacatgctcg 384
              |||||||||||||||||||||
Sbjct: 204945 ccgaggtgctcgacatgctcg 204965



to top

>dbj|AK070238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043J23, full
           insert sequence
          Length = 1936

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 agcggaggatcggggtggcga 153
           |||||||||||||||||||||
Sbjct: 592 agcggaggatcggggtggcga 572



to top

>dbj|AP006077.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46B01, TM0116,
             complete sequence
          Length = 121207

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 747   attcggattcaaattcagtaaagtgttat 775
             ||||||||||||||||||| |||| ||||
Sbjct: 14574 attcggattcaaattcagtcaagttttat 14602



to top

>dbj|AK065325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P24, full
           insert sequence
          Length = 1596

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 107 ggccggcggcgcggacgcggacggggagcggag 139
           ||||||||||||||||||  ||| |||||||||
Sbjct: 744 ggccggcggcgcggacgccaacgtggagcggag 776



to top

>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full
           insert sequence
          Length = 1118

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 207 ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243
           ||||||| ||||||| |||||||  ||||||||||||
Sbjct: 334 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 370



to top

>gb|AY104688.1| Zea mays PCO061445 mRNA sequence
          Length = 991

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 111 ggcggcgcggacgcggacggg 131
           |||||||||||||||||||||
Sbjct: 86  ggcggcgcggacgcggacggg 66



to top

>gb|AF046931.1|AF046931 Thiobacillus denitrificans Rubisco operon transcriptional regulator
           (cbbRII) gene, complete cds
          Length = 1185

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 362 cgccgaggtgctcgacatgct 382
           |||||||||||||||||||||
Sbjct: 529 cgccgaggtgctcgacatgct 549



to top

>dbj|AB022919.1| Rhodopseudomonas palustris psb operon genes for aerobic degradation
           of para-substituted benzoate derivatives, complete cds
          Length = 7517

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 101 cgcgatggccggcggcgcgga 121
           |||||||||||||||||||||
Sbjct: 543 cgcgatggccggcggcgcgga 523


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 111,870,580
Number of extensions: 5862664
Number of successful extensions: 129890
Number of sequences better than 10.0: 63
Number of HSP's gapped: 129880
Number of HSP's successfully gapped: 83
Length of query: 800
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 778
Effective length of database: 18,508,616,841
Effective search space: 14399703902298
Effective search space used: 14399703902298
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top