| Clone Name | FLbaf28i07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062251.1| Oryza sativa (japonica cultivar-group) Os05g0453700 (Os05g0453700) mRNA, complete cds Length = 834 Score = 486 bits (245), Expect = e-134 Identities = 412/465 (88%), Gaps = 2/465 (0%) Strand = Plus / Plus Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 163 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 222 Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251 ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct: 223 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 282 Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311 |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || Sbjct: 283 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 342 Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371 || ||||||||||| ||| || |||| || | |||||||| |||||||||||||||| Sbjct: 343 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 402 Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431 ||||||||||||||||| || ||||||||| | ||||| | || ||||||||||||||| Sbjct: 403 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 462 Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491 ||||||||||||||||||||||||||||| || || |||||||||||||||||||| || Sbjct: 463 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 522 Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550 ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| || Sbjct: 523 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 581 Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595 ||||||| |||| ||||| || |||||||| |||||||| ||||| Sbjct: 582 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 626
>dbj|AB110169.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 12YPG019 Length = 782 Score = 486 bits (245), Expect = e-134 Identities = 412/465 (88%), Gaps = 2/465 (0%) Strand = Plus / Plus Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 111 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 170 Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251 ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct: 171 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 230 Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311 |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || Sbjct: 231 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 290 Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371 || ||||||||||| ||| || |||| || | |||||||| |||||||||||||||| Sbjct: 291 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 350 Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431 ||||||||||||||||| || ||||||||| | ||||| | || ||||||||||||||| Sbjct: 351 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 410 Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491 ||||||||||||||||||||||||||||| || || |||||||||||||||||||| || Sbjct: 411 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 470 Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550 ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| || Sbjct: 471 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 529 Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595 ||||||| |||| ||||| || |||||||| |||||||| ||||| Sbjct: 530 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 574
>emb|CT828130.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123A02, full insert sequence Length = 1058 Score = 478 bits (241), Expect = e-131 Identities = 411/465 (88%), Gaps = 2/465 (0%) Strand = Plus / Plus Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 394 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 453 Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251 ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct: 454 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 513 Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311 |||||||||||||||||||||||| | || | |||||||||||||||||||||||| || Sbjct: 514 ggcggggaggaggccaagcacgccctgtgtggcaagtccggatccccgctgatccctctc 573 Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371 || ||||||||||| ||| || |||| || | |||||||| |||||||||||||||| Sbjct: 574 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 633 Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431 ||||||||||||||||| || ||||||||| | ||||| | || ||||||||||||||| Sbjct: 634 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 693 Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491 ||||||||||||||||||||||||||||| || || |||||||||||||||||||| || Sbjct: 694 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 753 Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550 ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| || Sbjct: 754 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 812 Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595 ||||||| |||| ||||| || |||||||| |||||||| ||||| Sbjct: 813 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 857
>dbj|AK063881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-F08, full insert sequence Length = 834 Score = 478 bits (241), Expect = e-131 Identities = 411/465 (88%), Gaps = 2/465 (0%) Strand = Plus / Plus Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 163 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 222 Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251 ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct: 223 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 282 Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311 |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || Sbjct: 283 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 342 Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371 || ||||||||||| ||| || |||| || | |||||||| |||||||||||||||| Sbjct: 343 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 402 Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431 ||||||||||||||||| || ||||||||| | ||||| | || |||||||||||| || Sbjct: 403 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctggac 462 Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491 ||||||||||||||||||||||||||||| || || |||||||||||||||||||| || Sbjct: 463 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 522 Query: 492 gtcatgggcagccacggcctcggtctc-atccagaggattcttctaggaagtgtgaccaa 550 ||||||||||||| ||||||||| ||| ||||||||||||||||| || |||||||| || Sbjct: 523 gtcatgggcagccgcggcctcgg-ctcgatccagaggattcttctggggagtgtgacaaa 581 Query: 551 ctacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595 ||||||| |||| ||||| || |||||||| |||||||| ||||| Sbjct: 582 ctacgtgctgtcaaacgcatcatgccctgtaacagtcgtcaaggg 626
>dbj|AK073600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I03, full insert sequence Length = 2257 Score = 426 bits (215), Expect = e-116 Identities = 341/383 (89%) Strand = Plus / Plus Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 166 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 225 Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251 ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct: 226 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 285 Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatccccctg 311 |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| || Sbjct: 286 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccccgctgatccctctc 345 Query: 312 tcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgccgaggtg 371 || ||||||||||| ||| || |||| || | |||||||| |||||||||||||||| Sbjct: 346 tccgagttccgggatccgacggcgatgcagcagtacggcgtgcactgcgacgccgaggtg 405 Query: 372 ctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaagctgtac 431 ||||||||||||||||| || ||||||||| | ||||| | || ||||||||||||||| Sbjct: 406 ctcgacatgctcgacacggcggcgcgccagttggagcttaccgtagtggcgaagctgtac 465 Query: 432 tggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgacaccatc 491 ||||||||||||||||||||||||||||| || || |||||||||||||||||||| || Sbjct: 466 tggggcgacgccagggagaagctctgcgacgccgtcgaggagcagaagatcgacacgctc 525 Query: 492 gtcatgggcagccacggcctcgg 514 ||||||||||||| ||||||||| Sbjct: 526 gtcatgggcagccgcggcctcgg 548 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 525 aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584 ||||||||||| || |||||||| ||||||||| |||| ||||| || |||||||| ||| Sbjct: 1979 aggattcttctggggagtgtgacaaactacgtgctgtcaaacgcatcatgccctgtaaca 2038 Query: 585 gtcgtgaaggg 595 ||||| ||||| Sbjct: 2039 gtcgtcaaggg 2049
>gb|DQ245316.1| Zea mays clone 14420 mRNA sequence Length = 803 Score = 369 bits (186), Expect = 1e-98 Identities = 399/470 (84%) Strand = Plus / Plus Query: 126 gacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||| |||||||||||||| || |||||||||| |||| |||| ||||||| Sbjct: 96 gacggggagcgcaggatcggggtggccatcgactactcggagagcgccaagaaggcgctg 155 Query: 186 gagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctg 245 || |||||| || | |||||||||| || || |||||| |||||||| ||||||||||| Sbjct: 156 gactgggccatcgacaacctgctccaccacggggacaccctcgtcgtcgtccacgtcctg 215 Query: 246 cgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatc 305 | |||||||| ||||||| |||||||| | ||||||||||||||||||||||||||||| Sbjct: 216 caccacggcgcggaggagaccaagcacacgctctgggccaagtccggatccccgctgatc 275 Query: 306 cccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgcc 365 || || || |||||||||||||| ||||||||| || ||||||||| | ||||||| Sbjct: 276 ccactctccgagttccgggagcccgaggtgatgcagggctacggcgtgcgccccgacgcc 335 Query: 366 gaggtgctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaag 425 |||||||||||| | ||||||| || ||||||||| |||| ||||||||||||||| Sbjct: 336 gaggtgctcgacgcgatcgacacggcagcgcgccagaagcagctgaaggtggtggcgaag 395 Query: 426 ctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgac 485 ||||||||||||||||||||||||||||||||||| || || ||||| | | |||||| Sbjct: 396 ctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggatctcaggatcgat 455 Query: 486 accatcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtg 545 || |||||||||| || | ||||||||| | |||||||||||||| || ||||| ||| Sbjct: 456 tccctcgtcatgggtagtcgcggcctcggcccgatccagaggattctcctgggaagcgtg 515 Query: 546 accaactacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595 || ||||||||| |||| ||||| |||||||| ||||||||||| ||||| Sbjct: 516 acaaactacgtgctgtcaaacgcatcgtgcccggtgacagtcgtcaaggg 565
>gb|BT016222.1| Zea mays clone Contig55 mRNA sequence Length = 892 Score = 369 bits (186), Expect = 1e-98 Identities = 399/470 (84%) Strand = Plus / Plus Query: 126 gacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||| |||||||||||||| || |||||||||| |||| |||| ||||||| Sbjct: 96 gacggggagcgcaggatcggggtggccatcgactactcggagagcgccaagaaggcgctg 155 Query: 186 gagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctg 245 || |||||| || | |||||||||| || || |||||| |||||||| ||||||||||| Sbjct: 156 gactgggccatcgacaacctgctccaccacggggacaccctcgtcgtcgtccacgtcctg 215 Query: 246 cgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccccgctgatc 305 | |||||||| ||||||| |||||||| | ||||||||||||||||||||||||||||| Sbjct: 216 caccacggcgcggaggagaccaagcacacgctctgggccaagtccggatccccgctgatc 275 Query: 306 cccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacctgcgacgcc 365 || || || |||||||||||||| ||||||||| || ||||||||| | ||||||| Sbjct: 276 ccactctccgagttccgggagcccgaggtgatgcagggctacggcgtgcgccccgacgcc 335 Query: 366 gaggtgctcgacatgctcgacaccgccgcgcgccagctcgagctcaaggtggtggcgaag 425 |||||||||||| | ||||||| || ||||||||| |||| ||||||||||||||| Sbjct: 336 gaggtgctcgacgcgatcgacacggcagcgcgccagaagcagctgaaggtggtggcgaag 395 Query: 426 ctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcagaagatcgac 485 ||||||||||||||||||||||||||||||||||| || || ||||| | |||||||| Sbjct: 396 ctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggacctcaagatcgat 455 Query: 486 accatcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtg 545 || |||||||||| || | |||||||| | |||||||||||||| || ||||| ||| Sbjct: 456 tccctcgtcatgggtagtcggggcctcggcccgatccagaggattctcctgggaagcgtg 515 Query: 546 accaactacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaaggg 595 || ||||||||| |||| ||||| |||||||| ||||||||||| ||||| Sbjct: 516 acaaactacgtgctgtcaaacgcatcgtgcccggtgacagtcgtcaaggg 565
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 210 bits (106), Expect = 6e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 85281 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 85340 Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251 ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct: 85341 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 85400 Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297 |||||||||||||||||||||||| | |||| |||||||||||||| Sbjct: 85401 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccc 85446 Score = 147 bits (74), Expect = 7e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 417 gtggcgaagctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcag 476 |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 85756 gtggcgaagctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggagcag 85815 Query: 477 aagatcgacaccatcgtcatgggcagccacggcctcgg 514 ||||||||||| ||||||||||||||| ||||||||| Sbjct: 85816 aagatcgacacgctcgtcatgggcagccgcggcctcgg 85853 Score = 87.7 bits (44), Expect = 6e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 298 cgctgatccccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacct 357 |||||||||| || || ||||||||||| ||| || |||| || | |||||||| || Sbjct: 85544 cgctgatccctctctccgagttccgggatccgacggcgatgcagcagtacggcgtgcact 85603 Query: 358 gcgacgccgaggtgctcgacatgctcgacaccgccgcgcgccag 401 ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 85604 gcgacgccgaggtgctcgacatgctcgacacggcggcgcgccag 85647 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 525 aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584 ||||||||||| || |||||||| ||||||||| |||| ||||| || |||||||| ||| Sbjct: 87283 aggattcttctggggagtgtgacaaactacgtgctgtcaaacgcatcatgccctgtaaca 87342 Query: 585 gtcgtgaaggg 595 ||||| ||||| Sbjct: 87343 gtcgtcaaggg 87353
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 210 bits (106), Expect = 6e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 132 gagcggaggatcggggtggcgatggactactcggcgagcagcaagcgggcgctggagtgg 191 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 22131300 gagcgaaggatcggggtggcgatggactactcggcgagcagcaagagggcgctggactgg 22131359 Query: 192 gccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctccacgtcctgcgccac 251 ||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct: 22131360 gccatcgccaacctgctccgccggggcgaccacctcgtcgtcctccacgtcctgcatcac 22131419 Query: 252 ggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297 |||||||||||||||||||||||| | |||| |||||||||||||| Sbjct: 22131420 ggcggggaggaggccaagcacgccctgtggggcaagtccggatccc 22131465 Score = 147 bits (74), Expect = 7e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 417 gtggcgaagctgtactggggcgacgccagggagaagctctgcgatgcggtggaggagcag 476 |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 22131775 gtggcgaagctgtactggggcgacgccagggagaagctctgcgacgccgtcgaggagcag 22131834 Query: 477 aagatcgacaccatcgtcatgggcagccacggcctcgg 514 ||||||||||| ||||||||||||||| ||||||||| Sbjct: 22131835 aagatcgacacgctcgtcatgggcagccgcggcctcgg 22131872 Score = 87.7 bits (44), Expect = 6e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 298 cgctgatccccctgtcggagttccgggagccggaggtgatgaagaactacggcgtcacct 357 |||||||||| || || ||||||||||| ||| || |||| || | |||||||| || Sbjct: 22131563 cgctgatccctctctccgagttccgggatccgacggcgatgcagcagtacggcgtgcact 22131622 Query: 358 gcgacgccgaggtgctcgacatgctcgacaccgccgcgcgccag 401 ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 22131623 gcgacgccgaggtgctcgacatgctcgacacggcggcgcgccag 22131666 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 525 aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584 ||||||||||| || |||||||| ||||||||| |||| ||||| || |||||||| ||| Sbjct: 22133302 aggattcttctggggagtgtgacaaactacgtgctgtcaaacgcatcatgccctgtaaca 22133361 Query: 585 gtcgtgaaggg 595 ||||| ||||| Sbjct: 22133362 gtcgtcaaggg 22133372 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 4146691 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 4146735 Score = 48.1 bits (24), Expect = 0.049 Identities = 27/28 (96%) Strand = Plus / Plus Query: 412 aggtggtggcgaagctgtactggggcga 439 |||||||||||||| ||||||||||||| Sbjct: 4147634 aggtggtggcgaaggtgtactggggcga 4147661 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 227 cgtcgtcctccacgtcctgcgccacggcg 255 ||||||||||| |||||| |||||||||| Sbjct: 2268891 cgtcgtcctcctcgtcctccgccacggcg 2268863 Score = 42.1 bits (21), Expect = 3.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 207 ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243 ||||||| ||||||| ||||||| |||||||||||| Sbjct: 24551368 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 24551404
>ref|NM_001051345.1| Oryza sativa (japonica cultivar-group) Os01g0849600 (Os01g0849600) mRNA, complete cds Length = 799 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 490 tcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtgacca 549 ||||||||||||||| |||||||| | |||||||||||||| || ||||||||||| | Sbjct: 464 tcgtcatgggcagccgtggcctcggccagatccagaggattctgctgggaagtgtgacta 523 Query: 550 actacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaagg 594 |||||||| ||||||| ||||| ||||||||||| ||||| |||| Sbjct: 524 actacgtgctgtcgaatgcgtcttgccctgtgaccgtcgtcaagg 568 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 118 cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177 |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| Sbjct: 92 cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 151 Query: 178 gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237 ||||||| ||||||| | | | ||||| |||||| |||||||||| ||||| |||||| Sbjct: 152 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 211 Query: 238 acgtcctgcgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297 || ||| || ||||||| | || ||||||||| ||| | ||||| | | ||||||| | Sbjct: 212 acatccggcaccacggccgcgacgaggccaagaacgtcctctggtctcacaccggatcac 271 Query: 298 cgctgatccc 307 |||||||||| Sbjct: 272 cgctgatccc 281
>dbj|AK108159.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G10, full insert sequence Length = 799 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 490 tcgtcatgggcagccacggcctcggtctcatccagaggattcttctaggaagtgtgacca 549 ||||||||||||||| |||||||| | |||||||||||||| || ||||||||||| | Sbjct: 464 tcgtcatgggcagccgtggcctcggccagatccagaggattctgctgggaagtgtgacta 523 Query: 550 actacgtgttgtcgaacgcgtcgtgccctgtgacagtcgtgaagg 594 |||||||| ||||||| ||||| ||||||||||| ||||| |||| Sbjct: 524 actacgtgctgtcgaatgcgtcttgccctgtgaccgtcgtcaagg 568 Score = 99.6 bits (50), Expect = 1e-17 Identities = 155/190 (81%) Strand = Plus / Plus Query: 118 cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177 |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| Sbjct: 92 cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 151 Query: 178 gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237 ||||||| ||||||| | | | ||||| |||||| |||||||||| ||||| |||||| Sbjct: 152 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 211 Query: 238 acgtcctgcgccacggcggggaggaggccaagcacgccgtctgggccaagtccggatccc 297 || ||| || ||||||| | || ||||||||| ||| | ||||| | | ||||||| | Sbjct: 212 acatccggcaccacggccgcgacgaggccaagaacgtcctctggtctcacaccggatcac 271 Query: 298 cgctgatccc 307 |||||||||| Sbjct: 272 cgctgatccc 281
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 118 cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177 |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| Sbjct: 36491300 cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 36491241 Query: 178 gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237 ||||||| ||||||| | | | ||||| |||||| |||||||||| ||||| |||||| Sbjct: 36491240 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 36491181 Query: 238 acgtcctgcgccacggcggggaggaggccaag 269 || ||| || ||||||| | || ||||||||| Sbjct: 36491180 acatccggcaccacggccgcgacgaggccaag 36491149 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 525 aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584 |||||||| || ||||||||||| ||||||||| ||||||| ||||| ||||||||||| Sbjct: 36490493 aggattctgctgggaagtgtgactaactacgtgctgtcgaatgcgtcttgccctgtgacc 36490434 Query: 585 gtcgtgaagg 594 ||||| |||| Sbjct: 36490433 gtcgtcaagg 36490424
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0414E03 Length = 139598 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 118 cggacgcggacggggagcggaggatcggggtggcgatggactactcggcgagcagcaagc 177 |||| |||| ||| ||||| |||||||| ||||| ||||||| |||| ||||||||||| Sbjct: 4675 cggaggcgggcggcgagcgcaggatcggcgtggccatggacttctcgccgagcagcaaga 4616 Query: 178 gggcgctggagtgggccgtcaagaacctgctccgccggggcgacaccgtcgtcgtcctcc 237 ||||||| ||||||| | | | ||||| |||||| |||||||||| ||||| |||||| Sbjct: 4615 aggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcc 4556 Query: 238 acgtcctgcgccacggcggggaggaggccaag 269 || ||| || ||||||| | || ||||||||| Sbjct: 4555 acatccggcaccacggccgcgacgaggccaag 4524 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 525 aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584 |||||||| || ||||||||||| ||||||||| ||||||| ||||| ||||||||||| Sbjct: 3868 aggattctgctgggaagtgtgactaactacgtgctgtcgaatgcgtcttgccctgtgacc 3809 Query: 585 gtcgtgaagg 594 ||||| |||| Sbjct: 3808 gtcgtcaagg 3799
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 525 aggattcttctaggaagtgtgaccaactacgtgttgtcgaacgcgtcgtgccctgtgaca 584 |||||||| || ||||||||||| ||||||||| ||||||| ||||| ||||||||||| Sbjct: 142332 aggattctgctgggaagtgtgactaactacgtgctgtcgaatgcgtcttgccctgtgacc 142273 Query: 585 gtcgtgaagg 594 ||||| |||| Sbjct: 142272 gtcgtcaagg 142263
>ref|NM_001061302.1| Oryza sativa (japonica cultivar-group) Os05g0170200 (Os05g0170200) mRNA, partial cds Length = 773 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 139 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 183 Score = 48.1 bits (24), Expect = 0.049 Identities = 27/28 (96%) Strand = Plus / Plus Query: 412 aggtggtggcgaagctgtactggggcga 439 |||||||||||||| ||||||||||||| Sbjct: 413 aggtggtggcgaaggtgtactggggcga 440
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 33170 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 33214 Score = 48.1 bits (24), Expect = 0.049 Identities = 27/28 (96%) Strand = Plus / Plus Query: 412 aggtggtggcgaagctgtactggggcga 439 |||||||||||||| ||||||||||||| Sbjct: 34113 aggtggtggcgaaggtgtactggggcga 34140
>gb|AY594285.1| Oryza sativa (japonica cultivar group) LRR-like protein mRNA, complete cds Length = 666 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 12 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 56 Score = 48.1 bits (24), Expect = 0.049 Identities = 27/28 (96%) Strand = Plus / Plus Query: 412 aggtggtggcgaagctgtactggggcga 439 |||||||||||||| ||||||||||||| Sbjct: 287 aggtggtggcgaaggtgtactggggcga 314
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 121385 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 121429 Score = 48.1 bits (24), Expect = 0.049 Identities = 27/28 (96%) Strand = Plus / Plus Query: 412 aggtggtggcgaagctgtactggggcga 439 |||||||||||||| ||||||||||||| Sbjct: 122328 aggtggtggcgaaggtgtactggggcga 122355
>dbj|AK063611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D04, full insert sequence Length = 773 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 139 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 183 Score = 48.1 bits (24), Expect = 0.049 Identities = 27/28 (96%) Strand = Plus / Plus Query: 412 aggtggtggcgaagctgtactggggcga 439 |||||||||||||| ||||||||||||| Sbjct: 413 aggtggtggcgaaggtgtactggggcga 440
>dbj|AK063609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D02, full insert sequence Length = 512 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 141 atcggggtggcgatggactactcggcgagcagcaagcgggcgctg 185 ||||||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 147 atcggggtggcgatggacttctcggcgtgcagcaaggcggcgctg 191
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 54.0 bits (27), Expect = 8e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 99 agcgcgatggccggcggcgcggacgcggacgggga 133 |||||||||||||||||||||| || ||||||||| Sbjct: 2165796 agcgcgatggccggcggcgcgggcggggacgggga 2165762
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 48.1 bits (24), Expect = 0.049 Identities = 27/28 (96%) Strand = Plus / Plus Query: 98 cagcgcgatggccggcggcgcggacgcg 125 |||||||| ||||||||||||||||||| Sbjct: 5368435 cagcgcgaaggccggcggcgcggacgcg 5368462
>gb|AE005844.1| Caulobacter crescentus CB15 section 170 of 359 of the complete genome Length = 11698 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 cagcgcgatggccggcggcgcgg 120 ||||||||||||||||||||||| Sbjct: 668 cagcgcgatggccggcggcgcgg 646
>ref|NM_001054597.1| Oryza sativa (japonica cultivar-group) Os02g0738600 (Os02g0738600) mRNA, complete cds Length = 1978 Score = 44.1 bits (22), Expect = 0.76 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 cggcggcgcggacgcggacggggagcggag 139 |||||||||||||||| ||| ||||||||| Sbjct: 1189 cggcggcgcggacgcgaacgtggagcggag 1218
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 gcgggcgctggagtgggccgtc 197 |||||||||||||||||||||| Sbjct: 4738010 gcgggcgctggagtgggccgtc 4738031
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 476 gaagatcgacaccatcgtcatg 497 |||||||||||||||||||||| Sbjct: 1140601 gaagatcgacaccatcgtcatg 1140580
>emb|CT983806.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 789 Score = 44.1 bits (22), Expect = 0.76 Identities = 31/34 (91%) Strand = Plus / Plus Query: 421 cgaagctgtactggggcgacgccagggagaagct 454 |||||||||||||||| || || ||||||||||| Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420
>emb|CT983105.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 790 Score = 44.1 bits (22), Expect = 0.76 Identities = 31/34 (91%) Strand = Plus / Plus Query: 421 cgaagctgtactggggcgacgccagggagaagct 454 |||||||||||||||| || || ||||||||||| Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420
>emb|CT982741.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 789 Score = 44.1 bits (22), Expect = 0.76 Identities = 31/34 (91%) Strand = Plus / Plus Query: 421 cgaagctgtactggggcgacgccagggagaagct 454 |||||||||||||||| || || ||||||||||| Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420
>emb|CT982606.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 791 Score = 44.1 bits (22), Expect = 0.76 Identities = 31/34 (91%) Strand = Plus / Plus Query: 421 cgaagctgtactggggcgacgccagggagaagct 454 |||||||||||||||| || || ||||||||||| Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420
>emb|CT981189.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 793 Score = 44.1 bits (22), Expect = 0.76 Identities = 31/34 (91%) Strand = Plus / Plus Query: 421 cgaagctgtactggggcgacgccagggagaagct 454 |||||||||||||||| || || ||||||||||| Sbjct: 387 cgaagctgtactggggggatgcgagggagaagct 420
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.76 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 cggcggcgcggacgcggacggggagcggag 139 |||||||||||||||| ||| ||||||||| Sbjct: 30860293 cggcggcgcggacgcgaacgtggagcggag 30860322
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 44.1 bits (22), Expect = 0.76 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 cggcggcgcggacgcggacggggagcggag 139 |||||||||||||||| ||| ||||||||| Sbjct: 43870 cggcggcgcggacgcgaacgtggagcggag 43899
>dbj|AK099698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K14, full insert sequence Length = 1980 Score = 44.1 bits (22), Expect = 0.76 Identities = 28/30 (93%) Strand = Plus / Plus Query: 110 cggcggcgcggacgcggacggggagcggag 139 |||||||||||||||| ||| ||||||||| Sbjct: 1191 cggcggcgcggacgcgaacgtggagcggag 1220
>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster region Length = 43220 Score = 44.1 bits (22), Expect = 0.76 Identities = 25/26 (96%) Strand = Plus / Minus Query: 457 gcgatgcggtggaggagcagaagatc 482 |||| ||||||||||||||||||||| Sbjct: 1946 gcgacgcggtggaggagcagaagatc 1921
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gcgggcgctggagtgggccgt 196 ||||||||||||||||||||| Sbjct: 323620 gcgggcgctggagtgggccgt 323640
>emb|CT832960.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA233C22, full insert sequence Length = 2057 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 107 ggccggcggcgcggacgcggacggggagcggag 139 |||||||||||||||||| ||| ||||||||| Sbjct: 1204 ggccggcggcgcggacgccaacgtggagcggag 1236
>ref|NM_001068980.1| Oryza sativa (japonica cultivar-group) Os08g0550200 (Os08g0550200) mRNA, complete cds Length = 1935 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 agcggaggatcggggtggcga 153 ||||||||||||||||||||| Sbjct: 591 agcggaggatcggggtggcga 571
>ref|NM_001063821.1| Oryza sativa (japonica cultivar-group) Os06g0247900 (Os06g0247900) mRNA, partial cds Length = 1592 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 107 ggccggcggcgcggacgcggacggggagcggag 139 |||||||||||||||||| ||| ||||||||| Sbjct: 742 ggccggcggcgcggacgccaacgtggagcggag 774
>ref|NM_001062507.1| Oryza sativa (japonica cultivar-group) Os05g0501700 (Os05g0501700) mRNA, complete cds Length = 1117 Score = 42.1 bits (21), Expect = 3.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 207 ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243 ||||||| ||||||| ||||||| |||||||||||| Sbjct: 333 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 369
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gtgatgaagaactacggcgtc 353 ||||||||||||||||||||| Sbjct: 695468 gtgatgaagaactacggcgtc 695488
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 cggcgcggacgcggacgggga 133 ||||||||||||||||||||| Sbjct: 40924 cggcgcggacgcggacgggga 40944
>gb|AY486719.1| Hevea brasiliensis clone gHbCIRA2436 microsatellite sequence Length = 483 Score = 42.1 bits (21), Expect = 3.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 136 ggaggatcggggtggcgatggactactcggcgagcagcaag 176 ||||||| || || || ||||||| |||||||||||||||| Sbjct: 286 ggaggataggtgtagccatggacttctcggcgagcagcaag 326
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 42.1 bits (21), Expect = 3.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 207 ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243 ||||||| ||||||| ||||||| |||||||||||| Sbjct: 65550 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 65586
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 227 cgtcgtcctccacgtcctgcgccacggcg 255 ||||||||||| |||||| |||||||||| Sbjct: 101322 cgtcgtcctcctcgtcctccgccacggcg 101294
>gb|AE012290.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 198 of 460 of the complete genome Length = 11880 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 374 cgacatgctcgacaccgccgcgcgccagctcga 406 ||||||||||| || || ||||||||||||||| Sbjct: 3155 cgacatgctcggcagcggcgcgcgccagctcga 3123
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cgccgaggtgctcgacatgct 382 ||||||||||||||||||||| Sbjct: 2714830 cgccgaggtgctcgacatgct 2714850
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 agcggaggatcggggtggcga 153 ||||||||||||||||||||| Sbjct: 27587392 agcggaggatcggggtggcga 27587412
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 107 ggccggcggcgcggacgcggacggggagcggag 139 |||||||||||||||||| ||| ||||||||| Sbjct: 7682924 ggccggcggcgcggacgccaacgtggagcggag 7682892
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 374 cgacatgctcgacaccgccgcgcgccagctcga 406 ||||||||||| || || ||||||||||||||| Sbjct: 2796697 cgacatgctcggcagcggcgcgcgccagctcga 2796729
>emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 2/8 Length = 341553 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 ggcgacaccgtcgtcgtcctc 236 ||||||||||||||||||||| Sbjct: 274239 ggcgacaccgtcgtcgtcctc 274219
>emb|BX323577.16| Zebrafish DNA sequence from clone CH211-277N6 in linkage group 24, complete sequence Length = 55628 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 ccgaggtgctcgacatgctcg 384 ||||||||||||||||||||| Sbjct: 23775 ccgaggtgctcgacatgctcg 23795
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 489 atcgtcatgggcagccacggcctcggtct 517 |||||||||||||||| ||| |||||||| Sbjct: 1561508 atcgtcatgggcagccgcggactcggtct 1561480
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 107 ggccggcggcgcggacgcggacggggagcggag 139 |||||||||||||||||| ||| ||||||||| Sbjct: 106179 ggccggcggcgcggacgccaacgtggagcggag 106147
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 agcggaggatcggggtggcga 153 ||||||||||||||||||||| Sbjct: 69682 agcggaggatcggggtggcga 69702
>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17, complete sequence Length = 247607 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 ccgaggtgctcgacatgctcg 384 ||||||||||||||||||||| Sbjct: 204945 ccgaggtgctcgacatgctcg 204965
>dbj|AK070238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043J23, full insert sequence Length = 1936 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 agcggaggatcggggtggcga 153 ||||||||||||||||||||| Sbjct: 592 agcggaggatcggggtggcga 572
>dbj|AP006077.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46B01, TM0116, complete sequence Length = 121207 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 747 attcggattcaaattcagtaaagtgttat 775 ||||||||||||||||||| |||| |||| Sbjct: 14574 attcggattcaaattcagtcaagttttat 14602
>dbj|AK065325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P24, full insert sequence Length = 1596 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 107 ggccggcggcgcggacgcggacggggagcggag 139 |||||||||||||||||| ||| ||||||||| Sbjct: 744 ggccggcggcgcggacgccaacgtggagcggag 776
>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full insert sequence Length = 1118 Score = 42.1 bits (21), Expect = 3.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 207 ctccgccggggcgacaccgtcgtcgtcctccacgtcc 243 ||||||| ||||||| ||||||| |||||||||||| Sbjct: 334 ctccgcccgggcgacgccgtcgtgctcctccacgtcc 370
>gb|AY104688.1| Zea mays PCO061445 mRNA sequence Length = 991 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ggcggcgcggacgcggacggg 131 ||||||||||||||||||||| Sbjct: 86 ggcggcgcggacgcggacggg 66
>gb|AF046931.1|AF046931 Thiobacillus denitrificans Rubisco operon transcriptional regulator (cbbRII) gene, complete cds Length = 1185 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cgccgaggtgctcgacatgct 382 ||||||||||||||||||||| Sbjct: 529 cgccgaggtgctcgacatgct 549
>dbj|AB022919.1| Rhodopseudomonas palustris psb operon genes for aerobic degradation of para-substituted benzoate derivatives, complete cds Length = 7517 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 cgcgatggccggcggcgcgga 121 ||||||||||||||||||||| Sbjct: 543 cgcgatggccggcggcgcgga 523 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 111,870,580 Number of extensions: 5862664 Number of successful extensions: 129890 Number of sequences better than 10.0: 63 Number of HSP's gapped: 129880 Number of HSP's successfully gapped: 83 Length of query: 800 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 778 Effective length of database: 18,508,616,841 Effective search space: 14399703902298 Effective search space used: 14399703902298 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)