No.
Definition
Score (bits)
E Value
1 emb|CT832024.1| Oryza sativa (indica cultivar-group) cDNA clone:...
432
e-117
2 ref|NM_001072301.1| Oryza sativa (japonica cultivar-group) Os11g...
424
e-115
3 dbj|AK073222.1| Oryza sativa (japonica cultivar-group) cDNA clon...
424
e-115
4 emb|CT832025.1| Oryza sativa (indica cultivar-group) cDNA clone:...
359
2e-95
5 gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom...
228
5e-56
6 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
228
5e-56
7 gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
220
1e-53
8 ref|NM_001072700.1| Oryza sativa (japonica cultivar-group) Os12g...
182
3e-42
9 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
182
3e-42
10 emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb...
182
3e-42
11 ref|NM_001072302.1| Oryza sativa (japonica cultivar-group) Os11g...
113
2e-21
12 ref|NM_001072701.1| Oryza sativa (japonica cultivar-group) Os12g...
100
3e-17
13 dbj|AK107301.1| Oryza sativa (japonica cultivar-group) cDNA clon...
100
3e-17
14 emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb...
100
3e-17
15 ref|NM_001059265.1| Oryza sativa (japonica cultivar-group) Os04g...
90
3e-14
16 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
90
3e-14
17 emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,...
90
3e-14
18 dbj|AK121649.1| Oryza sativa (japonica cultivar-group) cDNA clon...
90
3e-14
19 gb|K02637.1|BLYAMYABD Hordeum vulgare subsp. vulgare alpha-amyla...
72
7e-09
20 ref|NM_115142.4| Arabidopsis thaliana hydrolase/ protein serine/...
68
1e-07
21 gb|AF492668.1| Arabidopsis thaliana purple acid phosphatase (PAP...
68
1e-07
22 gb|BT006218.1| Arabidopsis thaliana At3g52820 gene, complete cds
68
1e-07
23 emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA...
68
1e-07
24 dbj|AK118546.1| Arabidopsis thaliana At3g52820 mRNA for putative...
68
1e-07
25 emb|BX822887.1|CNS0A7CB Arabidopsis thaliana Full-length cDNA Co...
68
1e-07
26 emb|BX824575.1|CNS0A6WW Arabidopsis thaliana Full-length cDNA Co...
68
1e-07
27 emb|BX822888.1|CNS0A70G Arabidopsis thaliana Full-length cDNA Co...
68
1e-07
28 emb|X52103.1|TAEMG T.aestivum Em gene
50
0.025
29 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.025
30 dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic D...
50
0.025
31 ref|NM_001068547.1| Oryza sativa (japonica cultivar-group) Os08g...
48
0.099
32 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.099
33 dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D...
48
0.099
34 dbj|AK109599.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.099
35 dbj|AK241534.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
46
0.39
36 ref|NM_001073902.1| Oryza sativa (japonica cultivar-group) Os12g...
46
0.39
37 ref|NM_001073901.1| Oryza sativa (japonica cultivar-group) Os12g...
46
0.39
38 dbj|AB066561.1| Oryza sativa ossap2 mRNA for secretory acid phos...
46
0.39
39 dbj|AK066273.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.39
40 dbj|AK058368.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.39
41 emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119...
46
0.39
42 ref|NM_001058426.1| Oryza sativa (japonica cultivar-group) Os03g...
44
1.6
43 gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s...
44
1.6
44 ref|NM_112942.3| Arabidopsis thaliana hydrolase/ protein serine/...
44
1.6
45 gb|AF448725.1| Arabidopsis thaliana putative purple acid phospha...
44
1.6
46 gb|AF441416.1| Aspergillus nomius isolate 174 AFLR (aflR) gene, ...
44
1.6
47 ref|NM_141274.1| Drosophila melanogaster CG2669-RA (CG2669), mRNA
44
1.6
48 gb|AY121655.1| Drosophila melanogaster RE04029 full insert cDNA
44
1.6
49 gb|AY093272.1| Arabidopsis thaliana purple acid phosphatase-like...
44
1.6
50 emb|CR665028.2|CNS0FC3U Tetraodon nigroviridis full-length cDNA
44
1.6
51 gb|AY062488.1| Arabidopsis thaliana purple acid phosphatase-like...
44
1.6
52 gb|AC007575.10| Drosophila melanogaster, chromosome 3R, region 8...
44
1.6
53 gb|AC008190.7|AC008190 Drosophila melanogaster, chromosome 3R, r...
44
1.6
54 dbj|AP000410.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
44
1.6
55 dbj|AK072278.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
1.6
56 gb|AY104536.1| Zea mays PCO116759 mRNA sequence
44
1.6
57 gb|CP000454.1| Arthrobacter sp. FB24, complete genome
42
6.1
58 gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome
42
6.1
59 ref|NM_001066285.1| Oryza sativa (japonica cultivar-group) Os07g...
42
6.1
60 gb|DQ895679.1| Homo sapiens clone FLH186577.01L; RZPDo839G0161D ...
42
6.1
61 gb|DQ892466.1| Synthetic construct Homo sapiens clone FLH186581....
42
6.1
62 gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl...
42
6.1
63 gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequ...
42
6.1
64 ref|NM_115141.2| Arabidopsis thaliana hydrolase/ protein serine/...
42
6.1
65 gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, comple...
42
6.1
66 gb|AC123645.7| Mus musculus chromosome 15, clone RP23-99N19, com...
42
6.1
67 gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ...
42
6.1
68 gb|AC115742.13| Mus musculus chromosome 7, clone RP23-477E13, co...
42
6.1
69 gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosom...
42
6.1
70 gb|BC038504.1| Homo sapiens SNF1-like kinase, mRNA (cDNA clone M...
42
6.1
71 gb|AF492667.1| Arabidopsis thaliana purple acid phosphatase (PAP...
42
6.1
72 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
42
6.1
73 emb|AL356481.16| Human DNA sequence from clone RP11-216B9 on chr...
42
6.1
74 gb|AY228176.1|AY228176S1 Streptomyces WP 4669 PD 116740 angucycl...
42
6.1
75 ref|NM_173354.3| Homo sapiens SNF1-like kinase (SNF1LK), mRNA >g...
42
6.1
76 dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D...
42
6.1
77 dbj|AK131076.1| Homo sapiens mRNA for FLJ00263 protein
42
6.1
78 emb|BX822817.1|CNS0A79J Arabidopsis thaliana Full-length cDNA Co...
42
6.1
79 emb|BX822722.1|CNS0A78D Arabidopsis thaliana Full-length cDNA Co...
42
6.1
80 emb|BX822589.1|CNS0A4UY Arabidopsis thaliana Full-length cDNA Co...
42
6.1
81 dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio...
42
6.1
82 gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co...
42
6.1
83 emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
42
6.1
84 dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:K...
42
6.1
>emb|CT832024.1 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA242E10, full
insert sequence
Length = 2240
Score = 432 bits (218), Expect = e-117
Identities = 499/593 (84%), Gaps = 6/593 (1%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||
Sbjct: 1293 cggtggcggatgccgcgggaggagagcggctcgccgtcgaacctctactactcgttcgac 1352
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgccagtttcgagcagggg 820
|||||||||||||||| ||||| | |||||||| |||||||| |||||| | |||
Sbjct: 1353 gcggcgggcggcgcggcgcacgtggtgatgctgggatcctacgcggagttcgaggaaggg 1412
Query: 821 tcggagcaacatgcatggttgaagagggacctcgccggcgtggaccggcagaggacgccg 880
||| ||| | || ||| || || |||||||||||||||| ||||||| | ||||||||
Sbjct: 1413 tcgccgcagcgggcgtggctggagcgggacctcgccggcgtcgaccggcggcggacgccg 1472
Query: 881 tggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcaccaggacgag 940
|||||| ||| |||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1473 tggctgctggcgctggtgcacgcgccgtggtacaacacgaacgaggcgcaccagggcgag 1532
Query: 941 gacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaacgtcgac 1000
| ||||| | |||||| |||||||||||| |||||||| |||||| |||||||
Sbjct: 1533 g------gcgagcggatgcgccgcgccatggagagcctcctctacgaggcccgcgtcgac 1586
Query: 1001 gtcgtcttcgccggacatgtccatgcctatgagcgctttacgaggatctacgacaacaag 1060
|||||||||||||| || ||||| ||||| |||||||| |||||||||||||||||| ||
Sbjct: 1587 gtcgtcttcgccggccacgtccacgcctacgagcgcttcacgaggatctacgacaacgag 1646
Query: 1061 gccgacgcccggggtccagtgtacatcaccatcggcgatggtggcaacagggaaggcctt 1120
|| ||| |||||| ||| ||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1647 gctgacagccggggcccaatgtacatcaccattggcgacgggggcaacagggaaggcctt 1706
Query: 1121 gcttccaaattcatcaaggatcacaagtcggcgccgctttccttgttccgtgaggcgagc 1180
||| ||| |||||||||| ||||||||||||| || || |||| | |||||||||
Sbjct: 1707 gctctcaagttcatcaaggggcacaagtcggcgcacctgtcggagttcagggaggcgagc 1766
Query: 1181 ttcggacacgggcgactgaggattgtaaacgagacaaccgccgtctggaggtggcaccgt 1240
||||| |||||||| |||||||| | |||||||| | ||||||||||| |||||||||
Sbjct: 1767 ttcgggcacgggcggctgaggatcctgaacgagacgagcgccgtctggacgtggcaccgc 1826
Query: 1241 aacgacgacaagttcgccaccgtggccgacgaggtctggctggagagcttggc 1293
||||||||| ||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 1827 aacgacgaccagttcgccaccgtccgcgacgaggtctggctgcacagcttggc 1879
Score = 159 bits (80), Expect = 4e-35
Identities = 122/136 (89%)
Strand = Plus / Plus
Query: 530 gactacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctg 589
||||||||| |||||||||||||||||||||| |||||||| |||| | ||||||||||
Sbjct: 1107 gactacgacgtgctgctgctccccggcgacctgtcgtacgccgacacgcagcagccgctg 1166
Query: 590 tgggactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacg 649
|||||| ||||||| || ||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 1167 tgggacacgttcgggcggctggtgcagccgctggcgagcgcgcggccgtggatggtgacg 1226
Query: 650 gagggtaaccatgaga 665
||||| ||||| ||||
Sbjct: 1227 gaggggaaccacgaga 1242
Score = 52.0 bits (26), Expect = 0.006
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 89 gccgatgagtatgtccggccgccgccgagaccgctggt 126
||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 675 gccgacgagtacgtccggccgccgccgagcccgctggt 712
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 239 gcgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
|||||||| |||||||||||||| || || || ||||| |||||||||||
Sbjct: 816 gcgccgtccgtggtggagtacgggacgtcgccggggaagtacacggcgtc 865
>ref|NM_001072301.1 | Oryza sativa (japonica cultivar-group) Os11g0151700 (Os11g0151700)
mRNA, complete cds
Length = 1768
Score = 424 bits (214), Expect = e-115
Identities = 498/593 (83%), Gaps = 6/593 (1%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||
Sbjct: 849 cggtggcggatgccgcgggaggagagcggctcgccgtcgaacctctactactcgttcgac 908
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgccagtttcgagcagggg 820
|||||||||||||||| ||||| | |||||||| |||||||| |||||| | |||
Sbjct: 909 gcggcgggcggcgcggcgcacgtggtgatgctgggatcctacgcggagttcgaggaaggg 968
Query: 821 tcggagcaacatgcatggttgaagagggacctcgccggcgtggaccggcagaggacgccg 880
||| ||| | || ||| || || |||||||||||||||| ||||||| | ||||||||
Sbjct: 969 tcgccgcagcgggcgtggctggagcgggacctcgccggcgtcgaccggcggcggacgccg 1028
Query: 881 tggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcaccaggacgag 940
|||||| ||| |||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1029 tggctgctggcgctggtgcacgcgccgtggtacaacacgaacgaggcgcaccagggcgag 1088
Query: 941 gacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaacgtcgac 1000
| ||||| | |||||| |||||||||||| |||||||| |||||| |||||||
Sbjct: 1089 g------gcgagcggatgcgccgcgccatggagagcctcctctacgaggcccgcgtcgac 1142
Query: 1001 gtcgtcttcgccggacatgtccatgcctatgagcgctttacgaggatctacgacaacaag 1060
|||||||||||||| || ||||| ||||| |||||||| |||||||||||||||||| ||
Sbjct: 1143 gtcgtcttcgccggccacgtccacgcctacgagcgcttcacgaggatctacgacaacgag 1202
Query: 1061 gccgacgcccggggtccagtgtacatcaccatcggcgatggtggcaacagggaaggcctt 1120
|| ||| |||||| ||| ||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1203 gctgacagccggggcccaatgtacatcaccattggcgacgggggcaacagggaaggcctt 1262
Query: 1121 gcttccaaattcatcaaggatcacaagtcggcgccgctttccttgttccgtgaggcgagc 1180
||| ||| |||||||||| ||||||||||||| || || |||| | |||||||||
Sbjct: 1263 gctctcaagttcatcaaggggcacaagtcggcgcacctgtcggagttcagggaggcgagc 1322
Query: 1181 ttcggacacgggcgactgaggattgtaaacgagacaaccgccgtctggaggtggcaccgt 1240
||||| |||||||| |||||| | | |||||||| | ||||||||||| |||||||||
Sbjct: 1323 ttcgggcacgggcggctgagggtcctgaacgagacgagcgccgtctggacgtggcaccgc 1382
Query: 1241 aacgacgacaagttcgccaccgtggccgacgaggtctggctggagagcttggc 1293
||||||||| ||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 1383 aacgacgaccagttcgccaccgtccgcgacgaggtctggctgcacagcttggc 1435
Score = 167 bits (84), Expect = 2e-37
Identities = 256/313 (81%), Gaps = 9/313 (2%)
Strand = Plus / Plus
Query: 359 atcggcccgctcaagcccagcaccacctactactaccggtgcgggaaggtcggcgacgcc 418
|||||||||||| || | ||||| || ||| ||||||||||||| |||| ||||||||
Sbjct: 489 atcggcccgctcgaggcgagcacgacgtaccactaccggtgcggcaaggccggcgacgag 548
Query: 419 gacatgtccctcaggactcctccggcgaacctgcccatcgagttggttgtcatcggtgac 478
|| |||||||||| |||||||||| ||||| | ||||| || || |||| |||
Sbjct: 549 ttca---ccctcaggacgcctccggcgaggctgcctgtggagttcgtcgtggtcggcgac 605
Query: 479 ctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcag------ac 532
|||||||||||| ||||| |||||||||||| |||||| ||| || | ||
Sbjct: 606 ctcgggcagacgaagtggacggcgtcgacgctgtcccacatcggcggcggcggcggcgac 665
Query: 533 tacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgtgg 592
|||||| |||||||||||||||||||||| |||||||| |||| | |||||||||||||
Sbjct: 666 tacgacgtgctgctgctccccggcgacctgtcgtacgccgacacgcagcagccgctgtgg 725
Query: 593 gactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacggag 652
||| ||||||| || ||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 726 gacacgttcgggcggctggtgcagccgctggcgagcgcgcggccgtggatggtgacggag 785
Query: 653 ggtaaccatgaga 665
|| ||||| ||||
Sbjct: 786 gggaaccacgaga 798
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 gccgatgagtatgtccggccgccgccgagaccgctggtgttgacggcgca 138
||||| ||||| ||||||||||| ||||| ||||||||| | ||||||||
Sbjct: 231 gccgacgagtacgtccggccgccaccgagcccgctggtgctcacggcgca 280
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 239 gcgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
|||||||| |||||||||||||| || || || ||||| |||||||||||
Sbjct: 372 gcgccgtccgtggtggagtacgggacgtcgccggggaagtacacggcgtc 421
>dbj|AK073222.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033024D09, full
insert sequence
Length = 1769
Score = 424 bits (214), Expect = e-115
Identities = 498/593 (83%), Gaps = 6/593 (1%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||
Sbjct: 850 cggtggcggatgccgcgggaggagagcggctcgccgtcgaacctctactactcgttcgac 909
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgccagtttcgagcagggg 820
|||||||||||||||| ||||| | |||||||| |||||||| |||||| | |||
Sbjct: 910 gcggcgggcggcgcggcgcacgtggtgatgctgggatcctacgcggagttcgaggaaggg 969
Query: 821 tcggagcaacatgcatggttgaagagggacctcgccggcgtggaccggcagaggacgccg 880
||| ||| | || ||| || || |||||||||||||||| ||||||| | ||||||||
Sbjct: 970 tcgccgcagcgggcgtggctggagcgggacctcgccggcgtcgaccggcggcggacgccg 1029
Query: 881 tggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcaccaggacgag 940
|||||| ||| |||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 1030 tggctgctggcgctggtgcacgcgccgtggtacaacacgaacgaggcgcaccagggcgag 1089
Query: 941 gacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaacgtcgac 1000
| ||||| | |||||| |||||||||||| |||||||| |||||| |||||||
Sbjct: 1090 g------gcgagcggatgcgccgcgccatggagagcctcctctacgaggcccgcgtcgac 1143
Query: 1001 gtcgtcttcgccggacatgtccatgcctatgagcgctttacgaggatctacgacaacaag 1060
|||||||||||||| || ||||| ||||| |||||||| |||||||||||||||||| ||
Sbjct: 1144 gtcgtcttcgccggccacgtccacgcctacgagcgcttcacgaggatctacgacaacgag 1203
Query: 1061 gccgacgcccggggtccagtgtacatcaccatcggcgatggtggcaacagggaaggcctt 1120
|| ||| |||||| ||| ||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 1204 gctgacagccggggcccaatgtacatcaccattggcgacgggggcaacagggaaggcctt 1263
Query: 1121 gcttccaaattcatcaaggatcacaagtcggcgccgctttccttgttccgtgaggcgagc 1180
||| ||| |||||||||| ||||||||||||| || || |||| | |||||||||
Sbjct: 1264 gctctcaagttcatcaaggggcacaagtcggcgcacctgtcggagttcagggaggcgagc 1323
Query: 1181 ttcggacacgggcgactgaggattgtaaacgagacaaccgccgtctggaggtggcaccgt 1240
||||| |||||||| |||||| | | |||||||| | ||||||||||| |||||||||
Sbjct: 1324 ttcgggcacgggcggctgagggtcctgaacgagacgagcgccgtctggacgtggcaccgc 1383
Query: 1241 aacgacgacaagttcgccaccgtggccgacgaggtctggctggagagcttggc 1293
||||||||| ||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 1384 aacgacgaccagttcgccaccgtccgcgacgaggtctggctgcacagcttggc 1436
Score = 167 bits (84), Expect = 2e-37
Identities = 256/313 (81%), Gaps = 9/313 (2%)
Strand = Plus / Plus
Query: 359 atcggcccgctcaagcccagcaccacctactactaccggtgcgggaaggtcggcgacgcc 418
|||||||||||| || | ||||| || ||| ||||||||||||| |||| ||||||||
Sbjct: 490 atcggcccgctcgaggcgagcacgacgtaccactaccggtgcggcaaggccggcgacgag 549
Query: 419 gacatgtccctcaggactcctccggcgaacctgcccatcgagttggttgtcatcggtgac 478
|| |||||||||| |||||||||| ||||| | ||||| || || |||| |||
Sbjct: 550 ttca---ccctcaggacgcctccggcgaggctgcctgtggagttcgtcgtggtcggcgac 606
Query: 479 ctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcag------ac 532
|||||||||||| ||||| |||||||||||| |||||| ||| || | ||
Sbjct: 607 ctcgggcagacgaagtggacggcgtcgacgctgtcccacatcggcggcggcggcggcgac 666
Query: 533 tacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgtgg 592
|||||| |||||||||||||||||||||| |||||||| |||| | |||||||||||||
Sbjct: 667 tacgacgtgctgctgctccccggcgacctgtcgtacgccgacacgcagcagccgctgtgg 726
Query: 593 gactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacggag 652
||| ||||||| || ||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 727 gacacgttcgggcggctggtgcagccgctggcgagcgcgcggccgtggatggtgacggag 786
Query: 653 ggtaaccatgaga 665
|| ||||| ||||
Sbjct: 787 gggaaccacgaga 799
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 89 gccgatgagtatgtccggccgccgccgagaccgctggtgttgacggcgca 138
||||| ||||| ||||||||||| ||||| ||||||||| | ||||||||
Sbjct: 232 gccgacgagtacgtccggccgccaccgagcccgctggtgctcacggcgca 281
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 239 gcgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
|||||||| |||||||||||||| || || || ||||| |||||||||||
Sbjct: 373 gcgccgtccgtggtggagtacgggacgtcgccggggaagtacacggcgtc 422
>emb|CT832025.1 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI208P02, full
insert sequence
Length = 2190
Score = 359 bits (181), Expect = 2e-95
Identities = 369/432 (85%), Gaps = 6/432 (1%)
Strand = Plus / Plus
Query: 862 ggaccggcagaggacgccgtggctggtggtgctgttgcacgcgccgtggtacaacaccaa 921
|||||||| | |||||||||||||| ||| |||| |||||||||||||||||||||| ||
Sbjct: 1428 ggaccggcggcggacgccgtggctgctggcgctggtgcacgcgccgtggtacaacacgaa 1487
Query: 922 cgaggcgcaccaggacgaggacgtgggcgagagcatgcgcaccgccatggagaggctcct 981
|||||||||||||| ||||| ||||| | |||||| |||||||||||| |||||
Sbjct: 1488 cgaggcgcaccagggcgagg------gcgagcggatgcgccgcgccatggagagcctcct 1541
Query: 982 ctatgaggccaacgtcgacgtcgtcttcgccggacatgtccatgcctatgagcgctttac 1041
||| |||||| ||||||||||||||||||||| || ||||| ||||| |||||||| ||
Sbjct: 1542 ctacgaggcccgcgtcgacgtcgtcttcgccggccacgtccacgcctacgagcgcttcac 1601
Query: 1042 gaggatctacgacaacaaggccgacgcccggggtccagtgtacatcaccatcggcgatgg 1101
|||||||||||||||| |||| ||| |||||| ||| ||||||||||||| ||||| ||
Sbjct: 1602 gaggatctacgacaacgaggctgacagccggggcccaatgtacatcaccattggcgacgg 1661
Query: 1102 tggcaacagggaaggccttgcttccaaattcatcaaggatcacaagtcggcgccgctttc 1161
||||||||||||||||||||| ||| |||||||||| ||||||||||||| || ||
Sbjct: 1662 gggcaacagggaaggccttgctctcaagttcatcaaggggcacaagtcggcgcacctgtc 1721
Query: 1162 cttgttccgtgaggcgagcttcggacacgggcgactgaggattgtaaacgagacaaccgc 1221
|||| | |||||||||||||| |||||||| |||||||| | |||||||| | |||
Sbjct: 1722 ggagttcagggaggcgagcttcgggcacgggcggctgaggatcctgaacgagacgagcgc 1781
Query: 1222 cgtctggaggtggcaccgtaacgacgacaagttcgccaccgtggccgacgaggtctggct 1281
|||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct: 1782 cgtctggacgtggcaccgcaacgacgaccagttcgccaccgtccgcgacgaggtctggct 1841
Query: 1282 ggagagcttggc 1293
| | ||||||||
Sbjct: 1842 gcacagcttggc 1853
Score = 159 bits (80), Expect = 4e-35
Identities = 122/136 (89%)
Strand = Plus / Plus
Query: 530 gactacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctg 589
||||||||| |||||||||||||||||||||| |||||||| |||| | ||||||||||
Sbjct: 1096 gactacgacgtgctgctgctccccggcgacctgtcgtacgccgacacgcagcagccgctg 1155
Query: 590 tgggactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacg 649
|||||| ||||||| || ||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 1156 tgggacacgttcgggcggctggtgcagccgctggcgagcgcgcggccgtggatggtgacg 1215
Query: 650 gagggtaaccatgaga 665
||||| ||||| ||||
Sbjct: 1216 gaggggaaccacgaga 1231
Score = 87.7 bits (44), Expect = 1e-13
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||
Sbjct: 1282 cggtggcggatgccgcgggaggagagcggctcgccgtcgaacctctactactcgttcgac 1341
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgc 804
|||||||||||||||| ||||| | |||||||| ||||||||
Sbjct: 1342 gcggcgggcggcgcggcgcacgtggtgatgctgggatcctacgc 1385
Score = 52.0 bits (26), Expect = 0.006
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 89 gccgatgagtatgtccggccgccgccgagaccgctggt 126
||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 664 gccgacgagtacgtccggccgccgccgagcccgctggt 701
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 239 gcgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
|||||||| |||||||||||||| || || || ||||| |||||||||||
Sbjct: 805 gcgccgtccgtggtggagtacgggacgtcgccggggaagtacacggcgtc 854
>gb|AC116949.11 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0040B10 map R2918, complete sequence
Length = 149132
Score = 228 bits (115), Expect = 5e-56
Identities = 282/338 (83%), Gaps = 6/338 (1%)
Strand = Plus / Minus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||
Sbjct: 59892 cggtggcggatgccgcgggaggagagcggctcgccgtcgaacctctactactcgttcgac 59833
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgccagtttcgagcagggg 820
|||||||||||||||| ||||| | |||||||| |||||||| |||||| | |||
Sbjct: 59832 gcggcgggcggcgcggcgcacgtggtgatgctgggatcctacgcggagttcgaggaaggg 59773
Query: 821 tcggagcaacatgcatggttgaagagggacctcgccggcgtggaccggcagaggacgccg 880
||| ||| | || ||| || || |||||||||||||||| ||||||| | ||||||||
Sbjct: 59772 tcgccgcagcgggcgtggctggagcgggacctcgccggcgtcgaccggcggcggacgccg 59713
Query: 881 tggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcaccaggacgag 940
|||||| ||| |||| |||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 59712 tggctgctggcgctggtgcacgcgccgtggtacaacacgaacgaggcgcaccagggcga- 59654
Query: 941 gacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaacgtcgac 1000
||||||| | |||||| |||||||||||| |||||||| |||||| |||||||
Sbjct: 59653 -----gggcgagcggatgcgccgcgccatggagagcctcctctacgaggcccgcgtcgac 59599
Query: 1001 gtcgtcttcgccggacatgtccatgcctatgagcgctt 1038
|||||||||||||| || ||||| ||||| ||||||||
Sbjct: 59598 gtcgtcttcgccggccacgtccacgcctacgagcgctt 59561
Score = 167 bits (84), Expect = 2e-37
Identities = 256/313 (81%), Gaps = 9/313 (2%)
Strand = Plus / Minus
Query: 359 atcggcccgctcaagcccagcaccacctactactaccggtgcgggaaggtcggcgacgcc 418
|||||||||||| || | ||||| || ||| ||||||||||||| |||| ||||||||
Sbjct: 60252 atcggcccgctcgaggcgagcacgacgtaccactaccggtgcggcaaggccggcgacgag 60193
Query: 419 gacatgtccctcaggactcctccggcgaacctgcccatcgagttggttgtcatcggtgac 478
|| |||||||||| |||||||||| ||||| | ||||| || || |||| |||
Sbjct: 60192 ttca---ccctcaggacgcctccggcgaggctgcctgtggagttcgtcgtggtcggcgac 60136
Query: 479 ctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcag------ac 532
|||||||||||| ||||| |||||||||||| |||||| ||| || | ||
Sbjct: 60135 ctcgggcagacgaagtggacggcgtcgacgctgtcccacatcggcggcggcggcggcgac 60076
Query: 533 tacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgtgg 592
|||||| |||||||||||||||||||||| |||||||| |||| | |||||||||||||
Sbjct: 60075 tacgacgtgctgctgctccccggcgacctgtcgtacgccgacacgcagcagccgctgtgg 60016
Query: 593 gactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacggag 652
||| ||||||| || ||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 60015 gacacgttcgggcggctggtgcagccgctggcgagcgcgcggccgtggatggtgacggag 59956
Query: 653 ggtaaccatgaga 665
|| ||||| ||||
Sbjct: 59955 gggaaccacgaga 59943
Score = 119 bits (60), Expect = 3e-23
Identities = 138/164 (84%)
Strand = Plus / Minus
Query: 1130 ttcatcaaggatcacaagtcggcgccgctttccttgttccgtgaggcgagcttcggacac 1189
|||||||||| ||||||||||||| || || |||| | |||||||||||||| |||
Sbjct: 59039 ttcatcaaggggcacaagtcggcgcacctgtcggagttcagggaggcgagcttcgggcac 58980
Query: 1190 gggcgactgaggattgtaaacgagacaaccgccgtctggaggtggcaccgtaacgacgac 1249
||||| |||||| | | |||||||| | ||||||||||| ||||||||| |||||||||
Sbjct: 58979 gggcggctgagggtcctgaacgagacgagcgccgtctggacgtggcaccgcaacgacgac 58920
Query: 1250 aagttcgccaccgtggccgacgaggtctggctggagagcttggc 1293
||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 58919 cagttcgccaccgtccgcgacgaggtctggctgcacagcttggc 58876
Score = 111 bits (56), Expect = 8e-21
Identities = 155/188 (82%)
Strand = Plus / Plus
Query: 473 ggtgacctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcagac 532
||||| || ||||||||||| ||||| |||||||||| ||||||| ||| || |||
Sbjct: 70853 ggtgatcttgggcagacgggatggacggagtcgacgctccggcacatcggcggcgacgac 70912
Query: 533 tacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgtgg 592
||||||||||||||||||||||||||||| |||||||| ||| | |||||| ||||
Sbjct: 70913 tacgacatgctgctgctccccggcgacctgtcgtacgccgacctgtaccagccgaggtgg 70972
Query: 593 gactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacggag 652
||| ||| ||| || || || |||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 70973 gacacgtacggccgcctcgtggagccgctggcgagcgcgcggccatggatggtgacgcag 71032
Query: 653 ggtaacca 660
|| |||||
Sbjct: 71033 gggaacca 71040
Score = 95.6 bits (48), Expect = 5e-16
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 1040 acgaggatctacgacaacaaggccgacgcccggggtccagtgtacatcaccatcggcgat 1099
|||||||||||||||||| |||| ||| |||||| ||| ||||||||||||| |||||
Sbjct: 59482 acgaggatctacgacaacgaggctgacagccggggcccaatgtacatcaccattggcgac 59423
Query: 1100 ggtggcaacagggaaggccttgct 1123
|| |||||||||||||||||||||
Sbjct: 59422 gggggcaacagggaaggccttgct 59399
Score = 89.7 bits (45), Expect = 3e-14
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 737 tccaacctctactactccttcgacgcggcgggcggcgcggtacacgtcctcatgctgggc 796
||||||||||||||||||||||||| || |||||||| || |||||| |||||||||||
Sbjct: 71138 tccaacctctactactccttcgacgtcgccggcggcgccgtgcacgtcatcatgctgggc 71197
Query: 797 tcctacgcc 805
|||||||||
Sbjct: 71198 tcctacgcc 71206
Score = 65.9 bits (33), Expect = 4e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 885 tggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcaccaggacgagg 941
|||||| |||| ||||||||||||||||||||| |||||| ||||||| || |||||
Sbjct: 71286 tggtggcgctggtgcacgcgccgtggtacaacagcaacgaagcgcaccggggcgagg 71342
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 239 gcgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
|||||||| |||||||||||||| || || || ||||| |||||||||||
Sbjct: 60369 gcgccgtccgtggtggagtacgggacgtcgccggggaagtacacggcgtc 60320
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 89 gccgatgagtatgtccggccgccgccgagaccgctggtgttgacggcgca 138
||||| ||||| ||||||||||| ||||| ||||||||| | ||||||||
Sbjct: 61056 gccgacgagtacgtccggccgccaccgagcccgctggtgctcacggcgca 61007
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 228 bits (115), Expect = 5e-56
Identities = 282/338 (83%), Gaps = 6/338 (1%)
Strand = Plus / Minus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||
Sbjct: 2407795 cggtggcggatgccgcgggaggagagcggctcgccgtcgaacctctactactcgttcgac 2407736
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgccagtttcgagcagggg 820
|||||||||||||||| ||||| | |||||||| |||||||| |||||| | |||
Sbjct: 2407735 gcggcgggcggcgcggcgcacgtggtgatgctgggatcctacgcggagttcgaggaaggg 2407676
Query: 821 tcggagcaacatgcatggttgaagagggacctcgccggcgtggaccggcagaggacgccg 880
||| ||| | || ||| || || |||||||||||||||| ||||||| | ||||||||
Sbjct: 2407675 tcgccgcagcgggcgtggctggagcgggacctcgccggcgtcgaccggcggcggacgccg 2407616
Query: 881 tggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcaccaggacgag 940
|||||| ||| |||| |||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 2407615 tggctgctggcgctggtgcacgcgccgtggtacaacacgaacgaggcgcaccagggcga- 2407557
Query: 941 gacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaacgtcgac 1000
||||||| | |||||| |||||||||||| |||||||| |||||| |||||||
Sbjct: 2407556 -----gggcgagcggatgcgccgcgccatggagagcctcctctacgaggcccgcgtcgac 2407502
Query: 1001 gtcgtcttcgccggacatgtccatgcctatgagcgctt 1038
|||||||||||||| || ||||| ||||| ||||||||
Sbjct: 2407501 gtcgtcttcgccggccacgtccacgcctacgagcgctt 2407464
Score = 167 bits (84), Expect = 2e-37
Identities = 256/313 (81%), Gaps = 9/313 (2%)
Strand = Plus / Minus
Query: 359 atcggcccgctcaagcccagcaccacctactactaccggtgcgggaaggtcggcgacgcc 418
|||||||||||| || | ||||| || ||| ||||||||||||| |||| ||||||||
Sbjct: 2408155 atcggcccgctcgaggcgagcacgacgtaccactaccggtgcggcaaggccggcgacgag 2408096
Query: 419 gacatgtccctcaggactcctccggcgaacctgcccatcgagttggttgtcatcggtgac 478
|| |||||||||| |||||||||| ||||| | ||||| || || |||| |||
Sbjct: 2408095 ttca---ccctcaggacgcctccggcgaggctgcctgtggagttcgtcgtggtcggcgac 2408039
Query: 479 ctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcag------ac 532
|||||||||||| ||||| |||||||||||| |||||| ||| || | ||
Sbjct: 2408038 ctcgggcagacgaagtggacggcgtcgacgctgtcccacatcggcggcggcggcggcgac 2407979
Query: 533 tacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgtgg 592
|||||| |||||||||||||||||||||| |||||||| |||| | |||||||||||||
Sbjct: 2407978 tacgacgtgctgctgctccccggcgacctgtcgtacgccgacacgcagcagccgctgtgg 2407919
Query: 593 gactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacggag 652
||| ||||||| || ||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 2407918 gacacgttcgggcggctggtgcagccgctggcgagcgcgcggccgtggatggtgacggag 2407859
Query: 653 ggtaaccatgaga 665
|| ||||| ||||
Sbjct: 2407858 gggaaccacgaga 2407846
Score = 119 bits (60), Expect = 3e-23
Identities = 138/164 (84%)
Strand = Plus / Minus
Query: 1130 ttcatcaaggatcacaagtcggcgccgctttccttgttccgtgaggcgagcttcggacac 1189
|||||||||| ||||||||||||| || || |||| | |||||||||||||| |||
Sbjct: 2406942 ttcatcaaggggcacaagtcggcgcacctgtcggagttcagggaggcgagcttcgggcac 2406883
Query: 1190 gggcgactgaggattgtaaacgagacaaccgccgtctggaggtggcaccgtaacgacgac 1249
||||| |||||| | | |||||||| | ||||||||||| ||||||||| |||||||||
Sbjct: 2406882 gggcggctgagggtcctgaacgagacgagcgccgtctggacgtggcaccgcaacgacgac 2406823
Query: 1250 aagttcgccaccgtggccgacgaggtctggctggagagcttggc 1293
||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 2406822 cagttcgccaccgtccgcgacgaggtctggctgcacagcttggc 2406779
Score = 111 bits (56), Expect = 8e-21
Identities = 155/188 (82%)
Strand = Plus / Plus
Query: 473 ggtgacctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcagac 532
||||| || ||||||||||| ||||| |||||||||| ||||||| ||| || |||
Sbjct: 2418756 ggtgatcttgggcagacgggatggacggagtcgacgctccggcacatcggcggcgacgac 2418815
Query: 533 tacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgtgg 592
||||||||||||||||||||||||||||| |||||||| ||| | |||||| ||||
Sbjct: 2418816 tacgacatgctgctgctccccggcgacctgtcgtacgccgacctgtaccagccgaggtgg 2418875
Query: 593 gactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacggag 652
||| ||| ||| || || || |||||||||| ||||| ||||| |||||||||||| ||
Sbjct: 2418876 gacacgtacggccgcctcgtggagccgctggcgagcgcgcggccatggatggtgacgcag 2418935
Query: 653 ggtaacca 660
|| |||||
Sbjct: 2418936 gggaacca 2418943
Score = 95.6 bits (48), Expect = 5e-16
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 1040 acgaggatctacgacaacaaggccgacgcccggggtccagtgtacatcaccatcggcgat 1099
|||||||||||||||||| |||| ||| |||||| ||| ||||||||||||| |||||
Sbjct: 2407385 acgaggatctacgacaacgaggctgacagccggggcccaatgtacatcaccattggcgac 2407326
Query: 1100 ggtggcaacagggaaggccttgct 1123
|| |||||||||||||||||||||
Sbjct: 2407325 gggggcaacagggaaggccttgct 2407302
Score = 89.7 bits (45), Expect = 3e-14
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 737 tccaacctctactactccttcgacgcggcgggcggcgcggtacacgtcctcatgctgggc 796
||||||||||||||||||||||||| || |||||||| || |||||| |||||||||||
Sbjct: 2419041 tccaacctctactactccttcgacgtcgccggcggcgccgtgcacgtcatcatgctgggc 2419100
Query: 797 tcctacgcc 805
|||||||||
Sbjct: 2419101 tcctacgcc 2419109
Score = 65.9 bits (33), Expect = 4e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 885 tggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcaccaggacgagg 941
|||||| |||| ||||||||||||||||||||| |||||| ||||||| || |||||
Sbjct: 2419189 tggtggcgctggtgcacgcgccgtggtacaacagcaacgaagcgcaccggggcgagg 2419245
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 239 gcgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
|||||||| |||||||||||||| || || || ||||| |||||||||||
Sbjct: 2408272 gcgccgtccgtggtggagtacgggacgtcgccggggaagtacacggcgtc 2408223
Score = 52.0 bits (26), Expect = 0.006
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 89 gccgatgagtatgtccggccgccgccgagaccgctggtgttgacggcgca 138
||||| ||||| ||||||||||| ||||| ||||||||| | ||||||||
Sbjct: 2408959 gccgacgagtacgtccggccgccaccgagcccgctggtgctcacggcgca 2408910
>ref|NM_001072700.1 | Oryza sativa (japonica cultivar-group) Os12g0150700 (Os12g0150700)
mRNA, complete cds
Length = 1173
Score = 182 bits (92), Expect = 3e-42
Identities = 203/240 (84%)
Strand = Plus / Plus
Query: 427 cctcaggactcctccggcgaacctgcccatcgagttggttgtcatcggtgacctcgggca 486
||||||||||||||||||||| |||||| | ||||| || |||||||| ||| | |||||
Sbjct: 423 cctcaggactcctccggcgaagctgcccgttgagttcgtcgtcatcggcgacgtggggca 482
Query: 487 gacgggctggaccaagtcgacgctgtcgcacatccgcgacgcagactacgacatgctgct 546
||||| ||||| | ||||||||||||||||| |||| || |||||| || |||
Sbjct: 483 gacggagtggacggcggcgacgctgtcgcacatcggcgaaaaggattacgacgtggcgct 542
Query: 547 gctccccggcgacctatcgtacgcggacagggtgcagccgctgtgggactcgttcggtcg 606
|| |||||||||| |||||||||||| || |||||||||||||||||||||||| ||
Sbjct: 543 cgtcgccggcgacctgtcgtacgcggacgggaagcagccgctgtgggactcgttcgggcg 602
Query: 607 tctggttcagccgctggccagcgcccggccgtggatggtgacggagggtaaccatgagaa 666
||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 603 gctggtgcagccgctggcgagcgcgcggccgtggatggtgacggagggcaaccacgagaa 662
Score = 63.9 bits (32), Expect = 2e-06
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| ||||||||||| || || | |||||||||||| ||||||
Sbjct: 748 cggtggcggatgccgcgggaggagagcgggtcgccgtcgagcctctactactcgttcgac 807
Query: 761 gcggcgggcggcgcgg 776
||||||||||||||||
Sbjct: 808 gcggcgggcggcgcgg 823
Score = 54.0 bits (27), Expect = 0.002
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 98 tatgtccggccgccgccgagaccgctggtgt 128
|||||||||||||||||||| ||||||||||
Sbjct: 94 tatgtccggccgccgccgaggccgctggtgt 124
Score = 50.1 bits (25), Expect = 0.025
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 240 cgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
||||||| || |||||||||||||| ||||| ||| | |||||||||||
Sbjct: 239 cgccgtccgtcgtggagtacggcacgtctccgggggagtacacggcgtc 287
Score = 44.1 bits (22), Expect = 1.6
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 335 tccggcgcgatacatgaggtgacgatcggcccgctcaagcccagcaccacctactactac 394
|||||||||||||| | || || |||||||||||| |||| |||||| |||||||||
Sbjct: 331 tccggcgcgatacaccacgtcaccatcggcccgctcgagccggccaccacgtactactac 390
Query: 395 cg 396
||
Sbjct: 391 cg 392
Score = 42.1 bits (21), Expect = 6.1
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 1040 acgaggatctacgacaacaaggccgacgcccggggtccagtgtacatcaccatcggcgat 1099
|||||||||||||||||| | ||| || || ||| || ||||||||||||| |||||
Sbjct: 901 acgaggatctacgacaacgaagccaacagccagggcccgatgtacatcaccattggcgac 960
Query: 1100 ggtggcaac 1108
|| ||||||
Sbjct: 961 ggaggcaac 969
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
Length = 27566993
Score = 182 bits (92), Expect = 3e-42
Identities = 203/240 (84%)
Strand = Plus / Minus
Query: 427 cctcaggactcctccggcgaacctgcccatcgagttggttgtcatcggtgacctcgggca 486
||||||||||||||||||||| |||||| | ||||| || |||||||| ||| | |||||
Sbjct: 2522078 cctcaggactcctccggcgaagctgcccgttgagttcgtcgtcatcggcgacgtggggca 2522019
Query: 487 gacgggctggaccaagtcgacgctgtcgcacatccgcgacgcagactacgacatgctgct 546
||||| ||||| | ||||||||||||||||| |||| || |||||| || |||
Sbjct: 2522018 gacggagtggacggcggcgacgctgtcgcacatcggcgaaaaggattacgacgtggcgct 2521959
Query: 547 gctccccggcgacctatcgtacgcggacagggtgcagccgctgtgggactcgttcggtcg 606
|| |||||||||| |||||||||||| || |||||||||||||||||||||||| ||
Sbjct: 2521958 cgtcgccggcgacctgtcgtacgcggacgggaagcagccgctgtgggactcgttcgggcg 2521899
Query: 607 tctggttcagccgctggccagcgcccggccgtggatggtgacggagggtaaccatgagaa 666
||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 2521898 gctggtgcagccgctggcgagcgcgcggccgtggatggtgacggagggcaaccacgagaa 2521839
Score = 105 bits (53), Expect = 5e-19
Identities = 154/188 (81%), Gaps = 6/188 (3%)
Strand = Plus / Minus
Query: 848 gacctcgccggcgtggaccggcagaggacgccgtggctggtggtgctgttgcacgcgccg 907
|||||||||||||||||| ||| ||||||||||||| |||||| | || ||||| ||||
Sbjct: 2521594 gacctcgccggcgtggacaggcggaggacgccgtgggtggtggcggtggcgcacgggccg 2521535
Query: 908 tggtacaacaccaacgaggcgcaccaggacgaggacgtgggcgagagcatgcgcaccgcc 967
||||||| |||||||| ||||||||||| ||| ||||||| | |||||| ||||
Sbjct: 2521534 tggtacagcaccaacggggcgcaccagggcga------gggcgagcggatgcgccgcgcc 2521481
Query: 968 atggagaggctcctctatgaggccaacgtcgacgtcgtcttcgccggacatgtccatgcc 1027
|||||| |||||||| || ||| |||||||||||||||| ||| || ||||| |||
Sbjct: 2521480 atggagcccctcctctacgacgcccgcgtcgacgtcgtcttctccgcccacgtccacgcc 2521421
Query: 1028 tatgagcg 1035
|| |||||
Sbjct: 2521420 tacgagcg 2521413
Score = 99.6 bits (50), Expect = 3e-17
Identities = 155/190 (81%)
Strand = Plus / Plus
Query: 471 tcggtgacctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcag 530
|||| |||||||| |||||||| ||||| |||||||||| |||| || || || |
Sbjct: 2536900 tcggcgacctcggccagacggggtggacggcgtcgacgctgcggcacgtcgccgccgacg 2536959
Query: 531 actacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgt 590
||||||||||||||| |||||||||||||| |||||||| ||| ||||||| ||
Sbjct: 2536960 tctacgacatgctgctcctccccggcgacctgtcgtacgccgacttctaccagccgcggt 2537019
Query: 591 gggactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacgg 650
||||| ||||||| || || || |||||||||| ||||| ||||| |||||||||||||
Sbjct: 2537020 gggacacgttcggccgcctcgtcgagccgctggcgagcgcgcggccatggatggtgacgg 2537079
Query: 651 agggtaacca 660
|||| |||||
Sbjct: 2537080 agggcaacca 2537089
Score = 81.8 bits (41), Expect = 7e-12
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 737 tccaacctctactactccttcgacgcggcgggcggcgcggtacacgtcctcatgctgggc 796
||||||||||||||||||||||||| || |||||||| || |||||| ||||||||||
Sbjct: 2537187 tccaacctctactactccttcgacgtcgccggcggcgccgtgcacgtcgtcatgctgggg 2537246
Query: 797 tcctacgcc 805
|||||||||
Sbjct: 2537247 tcctacgcc 2537255
Score = 65.9 bits (33), Expect = 4e-07
Identities = 87/105 (82%)
Strand = Plus / Minus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| ||||||||||| || || | |||||||||||| ||||||
Sbjct: 2521753 cggtggcggatgccgcgggaggagagcgggtcgccgtcgagcctctactactcgttcgac 2521694
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgcc 805
|||||||||||||||| ||||| | |||||||| || ||||||
Sbjct: 2521693 gcggcgggcggcgcggcgcacgtggttatgctggggtcgtacgcc 2521649
Score = 56.0 bits (28), Expect = 4e-04
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 885 tggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcacc 932
|||||| |||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 2537335 tggtggcgctggtgcacgcgccgtggtacaacagcaacagggcgcacc 2537382
Score = 54.0 bits (27), Expect = 0.002
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 98 tatgtccggccgccgccgagaccgctggtgt 128
|||||||||||||||||||| ||||||||||
Sbjct: 2522407 tatgtccggccgccgccgaggccgctggtgt 2522377
Score = 52.0 bits (26), Expect = 0.006
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 359 atcggcccgctcaagcccagcaccacctactactaccg 396
|||||||| ||||| |||||||||||||||| ||||||
Sbjct: 2536788 atcggcccactcaaacccagcaccacctacttctaccg 2536825
Score = 50.1 bits (25), Expect = 0.025
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 240 cgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
||||||| || |||||||||||||| ||||| ||| | |||||||||||
Sbjct: 2522262 cgccgtccgtcgtggagtacggcacgtctccgggggagtacacggcgtc 2522214
Score = 46.1 bits (23), Expect = 0.39
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1002 tcgtcttcgccggacatgtccatgcctatgagcgc 1036
||||||||||||| |||||||| ||||| ||||||
Sbjct: 27346693 tcgtcttcgccggccatgtccacgcctacgagcgc 27346659
Score = 44.1 bits (22), Expect = 1.6
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 335 tccggcgcgatacatgaggtgacgatcggcccgctcaagcccagcaccacctactactac 394
|||||||||||||| | || || |||||||||||| |||| |||||| |||||||||
Sbjct: 2522170 tccggcgcgatacaccacgtcaccatcggcccgctcgagccggccaccacgtactactac 2522111
Query: 395 cg 396
||
Sbjct: 2522110 cg 2522109
Score = 42.1 bits (21), Expect = 6.1
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 1040 acgaggatctacgacaacaaggccgacgcccggggtccagtgtacatcaccatcggcgat 1099
|||||||||||||||||| | ||| || || ||| || ||||||||||||| |||||
Sbjct: 2521107 acgaggatctacgacaacgaagccaacagccagggcccgatgtacatcaccattggcgac 2521048
Query: 1100 ggtggcaac 1108
|| ||||||
Sbjct: 2521047 ggaggcaac 2521039
>emb|AL928755.5 |CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 122901
Score = 182 bits (92), Expect = 3e-42
Identities = 203/240 (84%)
Strand = Plus / Plus
Query: 427 cctcaggactcctccggcgaacctgcccatcgagttggttgtcatcggtgacctcgggca 486
||||||||||||||||||||| |||||| | ||||| || |||||||| ||| | |||||
Sbjct: 21414 cctcaggactcctccggcgaagctgcccgttgagttcgtcgtcatcggcgacgtggggca 21473
Query: 487 gacgggctggaccaagtcgacgctgtcgcacatccgcgacgcagactacgacatgctgct 546
||||| ||||| | ||||||||||||||||| |||| || |||||| || |||
Sbjct: 21474 gacggagtggacggcggcgacgctgtcgcacatcggcgaaaaggattacgacgtggcgct 21533
Query: 547 gctccccggcgacctatcgtacgcggacagggtgcagccgctgtgggactcgttcggtcg 606
|| |||||||||| |||||||||||| || |||||||||||||||||||||||| ||
Sbjct: 21534 cgtcgccggcgacctgtcgtacgcggacgggaagcagccgctgtgggactcgttcgggcg 21593
Query: 607 tctggttcagccgctggccagcgcccggccgtggatggtgacggagggtaaccatgagaa 666
||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 21594 gctggtgcagccgctggcgagcgcgcggccgtggatggtgacggagggcaaccacgagaa 21653
Score = 105 bits (53), Expect = 5e-19
Identities = 154/188 (81%), Gaps = 6/188 (3%)
Strand = Plus / Plus
Query: 848 gacctcgccggcgtggaccggcagaggacgccgtggctggtggtgctgttgcacgcgccg 907
|||||||||||||||||| ||| ||||||||||||| |||||| | || ||||| ||||
Sbjct: 21898 gacctcgccggcgtggacaggcggaggacgccgtgggtggtggcggtggcgcacgggccg 21957
Query: 908 tggtacaacaccaacgaggcgcaccaggacgaggacgtgggcgagagcatgcgcaccgcc 967
||||||| |||||||| ||||||||||| ||| ||||||| | |||||| ||||
Sbjct: 21958 tggtacagcaccaacggggcgcaccagggcga------gggcgagcggatgcgccgcgcc 22011
Query: 968 atggagaggctcctctatgaggccaacgtcgacgtcgtcttcgccggacatgtccatgcc 1027
|||||| |||||||| || ||| |||||||||||||||| ||| || ||||| |||
Sbjct: 22012 atggagcccctcctctacgacgcccgcgtcgacgtcgtcttctccgcccacgtccacgcc 22071
Query: 1028 tatgagcg 1035
|| |||||
Sbjct: 22072 tacgagcg 22079
Score = 99.6 bits (50), Expect = 3e-17
Identities = 155/190 (81%)
Strand = Plus / Minus
Query: 471 tcggtgacctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcag 530
|||| |||||||| |||||||| ||||| |||||||||| |||| || || || |
Sbjct: 6592 tcggcgacctcggccagacggggtggacggcgtcgacgctgcggcacgtcgccgccgacg 6533
Query: 531 actacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgt 590
||||||||||||||| |||||||||||||| |||||||| ||| ||||||| ||
Sbjct: 6532 tctacgacatgctgctcctccccggcgacctgtcgtacgccgacttctaccagccgcggt 6473
Query: 591 gggactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacgg 650
||||| ||||||| || || || |||||||||| ||||| ||||| |||||||||||||
Sbjct: 6472 gggacacgttcggccgcctcgtcgagccgctggcgagcgcgcggccatggatggtgacgg 6413
Query: 651 agggtaacca 660
|||| |||||
Sbjct: 6412 agggcaacca 6403
Score = 81.8 bits (41), Expect = 7e-12
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 737 tccaacctctactactccttcgacgcggcgggcggcgcggtacacgtcctcatgctgggc 796
||||||||||||||||||||||||| || |||||||| || |||||| ||||||||||
Sbjct: 6305 tccaacctctactactccttcgacgtcgccggcggcgccgtgcacgtcgtcatgctgggg 6246
Query: 797 tcctacgcc 805
|||||||||
Sbjct: 6245 tcctacgcc 6237
Score = 65.9 bits (33), Expect = 4e-07
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| ||||||| ||||||||||| || || | |||||||||||| ||||||
Sbjct: 21739 cggtggcggatgccgcgggaggagagcgggtcgccgtcgagcctctactactcgttcgac 21798
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgcc 805
|||||||||||||||| ||||| | |||||||| || ||||||
Sbjct: 21799 gcggcgggcggcgcggcgcacgtggttatgctggggtcgtacgcc 21843
Score = 56.0 bits (28), Expect = 4e-04
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 885 tggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcacc 932
|||||| |||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 6157 tggtggcgctggtgcacgcgccgtggtacaacagcaacagggcgcacc 6110
Score = 54.0 bits (27), Expect = 0.002
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 98 tatgtccggccgccgccgagaccgctggtgt 128
|||||||||||||||||||| ||||||||||
Sbjct: 21085 tatgtccggccgccgccgaggccgctggtgt 21115
Score = 52.0 bits (26), Expect = 0.006
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 359 atcggcccgctcaagcccagcaccacctactactaccg 396
|||||||| ||||| |||||||||||||||| ||||||
Sbjct: 6704 atcggcccactcaaacccagcaccacctacttctaccg 6667
Score = 50.1 bits (25), Expect = 0.025
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 240 cgccgtcggtggtggagtacggcacatctcctgggaactacacggcgtc 288
||||||| || |||||||||||||| ||||| ||| | |||||||||||
Sbjct: 21230 cgccgtccgtcgtggagtacggcacgtctccgggggagtacacggcgtc 21278
Score = 44.1 bits (22), Expect = 1.6
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 335 tccggcgcgatacatgaggtgacgatcggcccgctcaagcccagcaccacctactactac 394
|||||||||||||| | || || |||||||||||| |||| |||||| |||||||||
Sbjct: 21322 tccggcgcgatacaccacgtcaccatcggcccgctcgagccggccaccacgtactactac 21381
Query: 395 cg 396
||
Sbjct: 21382 cg 21383
Score = 42.1 bits (21), Expect = 6.1
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 1040 acgaggatctacgacaacaaggccgacgcccggggtccagtgtacatcaccatcggcgat 1099
|||||||||||||||||| | ||| || || ||| || ||||||||||||| |||||
Sbjct: 22385 acgaggatctacgacaacgaagccaacagccagggcccgatgtacatcaccattggcgac 22444
Query: 1100 ggtggcaac 1108
|| ||||||
Sbjct: 22445 ggaggcaac 22453
>emb|AL929350.3 |CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 136490
Score = 99.6 bits (50), Expect = 3e-17
Identities = 155/190 (81%)
Strand = Plus / Minus
Query: 471 tcggtgacctcgggcagacgggctggaccaagtcgacgctgtcgcacatccgcgacgcag 530
|||| |||||||| |||||||| ||||| |||||||||| |||| || || || |
Sbjct: 131109 tcggcgacctcggccagacggggtggacggcgtcgacgctgcggcacgtcgccgccgacg 131050
Query: 531 actacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctgt 590
||||||||||||||| |||||||||||||| |||||||| ||| ||||||| ||
Sbjct: 131049 tctacgacatgctgctcctccccggcgacctgtcgtacgccgacttctaccagccgcggt 130990
Query: 591 gggactcgttcggtcgtctggttcagccgctggccagcgcccggccgtggatggtgacgg 650
||||| ||||||| || || || |||||||||| ||||| ||||| |||||||||||||
Sbjct: 130989 gggacacgttcggccgcctcgtcgagccgctggcgagcgcgcggccatggatggtgacgg 130930
Query: 651 agggtaacca 660
|||| |||||
Sbjct: 130929 agggcaacca 130920
Score = 81.8 bits (41), Expect = 7e-12
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 737 tccaacctctactactccttcgacgcggcgggcggcgcggtacacgtcctcatgctgggc 796
||||||||||||||||||||||||| || |||||||| || |||||| ||||||||||
Sbjct: 130822 tccaacctctactactccttcgacgtcgccggcggcgccgtgcacgtcgtcatgctgggg 130763
Query: 797 tcctacgcc 805
|||||||||
Sbjct: 130762 tcctacgcc 130754
Score = 56.0 bits (28), Expect = 4e-04
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 885 tggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcacc 932
|||||| |||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 130674 tggtggcgctggtgcacgcgccgtggtacaacagcaacagggcgcacc 130627
Score = 52.0 bits (26), Expect = 0.006
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 359 atcggcccgctcaagcccagcaccacctactactaccg 396
|||||||| ||||| |||||||||||||||| ||||||
Sbjct: 131221 atcggcccactcaaacccagcaccacctacttctaccg 131184
>ref|NM_001059265.1 | Oryza sativa (japonica cultivar-group) Os04g0410600 (Os04g0410600)
mRNA, complete cds
Length = 1626
Score = 89.7 bits (45), Expect = 3e-14
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 743 cggtggcggatgccgtacgaggagagcggctcggggaccagcctctactactccttcgac 802
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgcc 805
|| || |||||||| || |||||| ||||||| ||||| ||||||
Sbjct: 803 gccgccggcggcgccgtccacgtcgtcatgctcggctcgtacgcc 847
Score = 85.7 bits (43), Expect = 5e-13
Identities = 195/246 (79%), Gaps = 6/246 (2%)
Strand = Plus / Plus
Query: 874 gacgccgtggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcacca 933
|||||| ||| | ||||||||| |||||||||| ||||||||||| |||| ||||||
Sbjct: 916 gacgccctgggtcgtggtgctgctgcacgcgccctggtacaacacgaacgcggcgca--- 972
Query: 934 ggacgaggacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaa 993
||||| | ||||||| |||| | | ||||||||| | |||||||| ||||||
Sbjct: 973 ---cgagggggagggcgaggccatgaggaaggccatggagcgcctcctctacgaggcccg 1029
Query: 994 cgtcgacgtcgtcttcgccggacatgtccatgcctatgagcgctttacgaggatctacga 1053
||||||| ||||||||||||| |||||||| ||||| || ||||| || ||| | || |
Sbjct: 1030 cgtcgacatcgtcttcgccggccatgtccacgcctacgaacgcttcacaagggtatataa 1089
Query: 1054 caacaaggccgacgcccggggtccagtgtacatcaccatcggcgatggtggcaacaggga 1113
|||| |||| || | | || || ||| |||||||||| ||||| || |||||||||||
Sbjct: 1090 caacgaggcgaacccgtgtggaccggtgcacatcaccataggcgacggcggcaacaggga 1149
Query: 1114 aggcct 1119
||||||
Sbjct: 1150 aggcct 1155
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 530 gactacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctg 589
||||||||| |||||||| | ||||||||||| || ||||| ||| ||||||||||
Sbjct: 551 gactacgacgtgctgctggttcccggcgacctgtcctacgccgacgcccagcagccgctg 610
Query: 590 tgggactcgttcgg 603
||||||||||||||
Sbjct: 611 tgggactcgttcgg 624
Score = 54.0 bits (27), Expect = 0.002
Identities = 99/123 (80%)
Strand = Plus / Plus
Query: 1172 gaggcgagcttcggacacgggcgactgaggattgtaaacgagacaaccgccgtctggagg 1231
|||||||||||||| |||||||| ||||| | || |||| ||| |||| ||||| |
Sbjct: 1208 gaggcgagcttcgggcacgggcggctgagcgtggtgaacgcgaccgccgcgcgctggacg 1267
Query: 1232 tggcaccgtaacgacgacaagttcgccaccgtggccgacgaggtctggctggagagcttg 1291
|||||||| ||||||||| | |||||||| ||||||| |||||||||||||| ||
Sbjct: 1268 tggcaccgcaacgacgacgccgactccaccgtgcgcgacgagatctggctggagagcctg 1327
Query: 1292 gct 1294
|||
Sbjct: 1328 gct 1330
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 89.7 bits (45), Expect = 3e-14
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 20293571 cggtggcggatgccgtacgaggagagcggctcggggaccagcctctactactccttcgac 20293512
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgcc 805
|| || |||||||| || |||||| ||||||| ||||| ||||||
Sbjct: 20293511 gccgccggcggcgccgtccacgtcgtcatgctcggctcgtacgcc 20293467
Score = 75.8 bits (38), Expect = 4e-10
Identities = 133/165 (80%), Gaps = 6/165 (3%)
Strand = Plus / Minus
Query: 874 gacgccgtggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcacca 933
|||||| ||| | ||||||||| |||||||||| ||||||||||| |||| ||||||
Sbjct: 20293398 gacgccctgggtcgtggtgctgctgcacgcgccctggtacaacacgaacgcggcgca--- 20293342
Query: 934 ggacgaggacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaa 993
||||| | ||||||| |||| | | ||||||||| | |||||||| ||||||
Sbjct: 20293341 ---cgagggggagggcgaggccatgaggaaggccatggagcgcctcctctacgaggcccg 20293285
Query: 994 cgtcgacgtcgtcttcgccggacatgtccatgcctatgagcgctt 1038
||||||| ||||||||||||| |||||||| ||||| || |||||
Sbjct: 20293284 cgtcgacatcgtcttcgccggccatgtccacgcctacgaacgctt 20293240
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 530 gactacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctg 589
||||||||| |||||||| | ||||||||||| || ||||| ||| ||||||||||
Sbjct: 20293763 gactacgacgtgctgctggttcccggcgacctgtcctacgccgacgcccagcagccgctg 20293704
Query: 590 tgggactcgttcgg 603
||||||||||||||
Sbjct: 20293703 tgggactcgttcgg 20293690
Score = 54.0 bits (27), Expect = 0.002
Identities = 99/123 (80%)
Strand = Plus / Minus
Query: 1172 gaggcgagcttcggacacgggcgactgaggattgtaaacgagacaaccgccgtctggagg 1231
|||||||||||||| |||||||| ||||| | || |||| ||| |||| ||||| |
Sbjct: 20292925 gaggcgagcttcgggcacgggcggctgagcgtggtgaacgcgaccgccgcgcgctggacg 20292866
Query: 1232 tggcaccgtaacgacgacaagttcgccaccgtggccgacgaggtctggctggagagcttg 1291
|||||||| ||||||||| | |||||||| ||||||| |||||||||||||| ||
Sbjct: 20292865 tggcaccgcaacgacgacgccgactccaccgtgcgcgacgagatctggctggagagcctg 20292806
Query: 1292 gct 1294
|||
Sbjct: 20292805 gct 20292803
Score = 50.1 bits (25), Expect = 0.025
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1083 acatcaccatcggcgatggtggcaacagggaaggcct 1119
|||||||||| ||||| || |||||||||||||||||
Sbjct: 20293101 acatcaccataggcgacggcggcaacagggaaggcct 20293065
>emb|AL662947.3 |OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
complete sequence
Length = 143301
Score = 89.7 bits (45), Expect = 3e-14
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 24204 cggtggcggatgccgtacgaggagagcggctcggggaccagcctctactactccttcgac 24145
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgcc 805
|| || |||||||| || |||||| ||||||| ||||| ||||||
Sbjct: 24144 gccgccggcggcgccgtccacgtcgtcatgctcggctcgtacgcc 24100
Score = 75.8 bits (38), Expect = 4e-10
Identities = 133/165 (80%), Gaps = 6/165 (3%)
Strand = Plus / Minus
Query: 874 gacgccgtggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcacca 933
|||||| ||| | ||||||||| |||||||||| ||||||||||| |||| ||||||
Sbjct: 24031 gacgccctgggtcgtggtgctgctgcacgcgccctggtacaacacgaacgcggcgca--- 23975
Query: 934 ggacgaggacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaa 993
||||| | ||||||| |||| | | ||||||||| | |||||||| ||||||
Sbjct: 23974 ---cgagggggagggcgaggccatgaggaaggccatggagcgcctcctctacgaggcccg 23918
Query: 994 cgtcgacgtcgtcttcgccggacatgtccatgcctatgagcgctt 1038
||||||| ||||||||||||| |||||||| ||||| || |||||
Sbjct: 23917 cgtcgacatcgtcttcgccggccatgtccacgcctacgaacgctt 23873
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 530 gactacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctg 589
||||||||| |||||||| | ||||||||||| || ||||| ||| ||||||||||
Sbjct: 24396 gactacgacgtgctgctggttcccggcgacctgtcctacgccgacgcccagcagccgctg 24337
Query: 590 tgggactcgttcgg 603
||||||||||||||
Sbjct: 24336 tgggactcgttcgg 24323
Score = 54.0 bits (27), Expect = 0.002
Identities = 99/123 (80%)
Strand = Plus / Minus
Query: 1172 gaggcgagcttcggacacgggcgactgaggattgtaaacgagacaaccgccgtctggagg 1231
|||||||||||||| |||||||| ||||| | || |||| ||| |||| ||||| |
Sbjct: 23558 gaggcgagcttcgggcacgggcggctgagcgtggtgaacgcgaccgccgcgcgctggacg 23499
Query: 1232 tggcaccgtaacgacgacaagttcgccaccgtggccgacgaggtctggctggagagcttg 1291
|||||||| ||||||||| | |||||||| ||||||| |||||||||||||| ||
Sbjct: 23498 tggcaccgcaacgacgacgccgactccaccgtgcgcgacgagatctggctggagagcctg 23439
Query: 1292 gct 1294
|||
Sbjct: 23438 gct 23436
Score = 50.1 bits (25), Expect = 0.025
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1083 acatcaccatcggcgatggtggcaacagggaaggcct 1119
|||||||||| ||||| || |||||||||||||||||
Sbjct: 23734 acatcaccataggcgacggcggcaacagggaaggcct 23698
>dbj|AK121649.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033060H09, full
insert sequence
Length = 1643
Score = 89.7 bits (45), Expect = 3e-14
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 701 cggtggcgcatgccgcacgaggagagcggctccaactccaacctctactactccttcgac 760
|||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 760 cggtggcggatgccgtacgaggagagcggctcggggaccagcctctactactccttcgac 819
Query: 761 gcggcgggcggcgcggtacacgtcctcatgctgggctcctacgcc 805
|| || |||||||| || |||||| ||||||| ||||| ||||||
Sbjct: 820 gccgccggcggcgccgtccacgtcgtcatgctcggctcgtacgcc 864
Score = 85.7 bits (43), Expect = 5e-13
Identities = 195/246 (79%), Gaps = 6/246 (2%)
Strand = Plus / Plus
Query: 874 gacgccgtggctggtggtgctgttgcacgcgccgtggtacaacaccaacgaggcgcacca 933
|||||| ||| | ||||||||| |||||||||| ||||||||||| |||| ||||||
Sbjct: 933 gacgccctgggtcgtggtgctgctgcacgcgccctggtacaacacgaacgcggcgca--- 989
Query: 934 ggacgaggacgtgggcgagagcatgcgcaccgccatggagaggctcctctatgaggccaa 993
||||| | ||||||| |||| | | ||||||||| | |||||||| ||||||
Sbjct: 990 ---cgagggggagggcgaggccatgaggaaggccatggagcgcctcctctacgaggcccg 1046
Query: 994 cgtcgacgtcgtcttcgccggacatgtccatgcctatgagcgctttacgaggatctacga 1053
||||||| ||||||||||||| |||||||| ||||| || ||||| || ||| | || |
Sbjct: 1047 cgtcgacatcgtcttcgccggccatgtccacgcctacgaacgcttcacaagggtatataa 1106
Query: 1054 caacaaggccgacgcccggggtccagtgtacatcaccatcggcgatggtggcaacaggga 1113
|||| |||| || | | || || ||| |||||||||| ||||| || |||||||||||
Sbjct: 1107 caacgaggcgaacccgtgtggaccggtgcacatcaccataggcgacggcggcaacaggga 1166
Query: 1114 aggcct 1119
||||||
Sbjct: 1167 aggcct 1172
Score = 60.0 bits (30), Expect = 3e-05
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 530 gactacgacatgctgctgctccccggcgacctatcgtacgcggacagggtgcagccgctg 589
||||||||| |||||||| | ||||||||||| || ||||| ||| ||||||||||
Sbjct: 568 gactacgacgtgctgctggttcccggcgacctgtcctacgccgacgcccagcagccgctg 627
Query: 590 tgggactcgttcgg 603
||||||||||||||
Sbjct: 628 tgggactcgttcgg 641
Score = 54.0 bits (27), Expect = 0.002
Identities = 99/123 (80%)
Strand = Plus / Plus
Query: 1172 gaggcgagcttcggacacgggcgactgaggattgtaaacgagacaaccgccgtctggagg 1231
|||||||||||||| |||||||| ||||| | || |||| ||| |||| ||||| |
Sbjct: 1225 gaggcgagcttcgggcacgggcggctgagcgtggtgaacgcgaccgccgcgcgctggacg 1284
Query: 1232 tggcaccgtaacgacgacaagttcgccaccgtggccgacgaggtctggctggagagcttg 1291
|||||||| ||||||||| | |||||||| ||||||| |||||||||||||| ||
Sbjct: 1285 tggcaccgcaacgacgacgccgactccaccgtgcgcgacgagatctggctggagagcctg 1344
Query: 1292 gct 1294
|||
Sbjct: 1345 gct 1347
>emb|AL356481.16 | Human DNA sequence from clone RP11-216B9 on chromosome 9 Contains the 3'
end of the GLE1L gene for GLE1 RNA export mediator-like
(yeast), the SPTAN1 gene for spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN), a
novel gene (MGC20486), a pseudogene similar to part of
vesicle transport through interaction with t-SNAREs homolog
1B (yeast) (VTI1B), two novel genes, the 5' end of the SET
gene for SET translocation (myeloid leukemia-associated)
(2PP2A, I2PP2A, PHAPII, TAF-IBETA) and three CpG islands,
complete sequence
Length = 175666
Score = 42.1 bits (21), Expect = 6.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 536 gacatgctgctgctccccggc 556
|||||||||||||||||||||
Sbjct: 108171 gacatgctgctgctccccggc 108151
>dbj|AP001046.1 | Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
region, complete sequence
Length = 158063
Score = 42.1 bits (21), Expect = 6.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 857 ggcgtggaccggcagaggacg 877
|||||||||||||||||||||
Sbjct: 152878 ggcgtggaccggcagaggacg 152858
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 219,947,606
Number of extensions: 11814220
Number of successful extensions: 240587
Number of sequences better than 10.0: 84
Number of HSP's gapped: 240557
Number of HSP's successfully gapped: 212
Length of query: 1608
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1585
Effective length of database: 18,503,978,556
Effective search space: 29328806011260
Effective search space used: 29328806011260
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)