| Clone Name | FLbaf25i13 |
|---|---|
| Clone Library Name | barley_pub |
>O54916:REPS1_MOUSE RalBP1-associated Eps domain-containing protein 1 - Mus musculus| (Mouse) Length = 743 Score = 36.6 bits (83), Expect = 0.33 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 7/77 (9%) Frame = -1 Query: 1376 ALIHKAPLRCPPAQIHLEAQWRLPSSQDHKRP*TQL*ALSSLLPHRHN-------PSSST 1218 A++H P+R P++IH++ +S DH P + L S L + PS +T Sbjct: 397 AIVHPVPIRMTPSKIHMQEMELKRTSSDHTNPTSPLLVKPSDLSEENKINSSVKFPSGNT 456 Query: 1217 LNSIQMAYQHPSDHQRI 1167 ++ + PSD ++I Sbjct: 457 VDGYSSSDSFPSDPEQI 473
>Q61CX7:LIN28_CAEBR Protein lin-28 - Caenorhabditis briggsae| Length = 237 Score = 35.4 bits (80), Expect = 0.74 Identities = 28/106 (26%), Positives = 44/106 (41%) Frame = +2 Query: 389 VVADGKQASPPSLQEPAAGVSSLKESLSATTLEENSGQPDQDTVMAPTPSPPGSGIWERI 568 VV++G+ P VS ++ +LEE G P D + +PTP GS W + Sbjct: 4 VVSEGRNGGNERYS-PQDDVSKELPDINGLSLEETMGIPSFDRLPSPTPRYFGSCKWFNV 62 Query: 569 RRDWGLAYYIRVDLGGSFHTYPYAGGPFQSLEEAEKAMDRYFLQHR 706 + +G H F+SL+E E+ Y++Q R Sbjct: 63 SKGYGFVIDDNTGEDLFVHQSNLNMQGFRSLDEGERV--SYYIQER 106
>P50851:LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein - Homo| sapiens (Human) Length = 2863 Score = 33.1 bits (74), Expect = 3.7 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 18/112 (16%) Frame = +2 Query: 266 FRDLEDAVRARYVSI----YLSWHRRSKHRDLPPPSTDRMFHFLFVVADGKQASPPSLQE 433 FRD+ED+ +A+++++ ++S SK+RD+ P +R H G + SL E Sbjct: 1520 FRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNER--HSQSCTETGSENENVSLSE 1577 Query: 434 --PAA----GVSSLKESLSATTLEENSGQPDQDTV--------MAPTPSPPG 547 PAA +S++ES S ++ ++T + P +PPG Sbjct: 1578 ITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHVEVTPHTAPPG 1629
>O18964:SYNJ1_BOVIN Synaptojanin-1 - Bos taurus (Bovine)| Length = 1324 Score = 32.7 bits (73), Expect = 4.8 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 8/122 (6%) Frame = -1 Query: 728 DALIVLDPDVEGNSDPWLSQLPLGSETALP-HKDTCGKSPRDRP*C---NTLIPSHVVF- 564 DA + D D+EG+ D + +++ E LP H S RP + SH+ + Sbjct: 1002 DAEVTADFDMEGDVDDYSAEV----EEILPQHLQPSSSSALARPPVLHPGPVPASHLPYR 1057 Query: 563 ---VPKCLTREAMVSVP*QCPDPAAQSSPPMS*RSATP*GTRHLQQVPATKEVKPASHPP 393 VP R + P + P P A S P+ AT LQQ +++ ++P PP Sbjct: 1058 RGPVPSLPVRPSRA--PSRTPGPPASQSSPVDTLPAT-----QLQQKDSSQTLEPKRPPP 1110 Query: 392 PR 387 PR Sbjct: 1111 PR 1112
>Q811L6:MAST4_MOUSE Microtubule-associated serine/threonine-protein kinase 4 - Mus| musculus (Mouse) Length = 2618 Score = 32.7 bits (73), Expect = 4.8 Identities = 21/79 (26%), Positives = 35/79 (44%) Frame = +2 Query: 443 GVSSLKESLSATTLEENSGQPDQDTVMAPTPSPPGSGIWERIRRDWGLAYYIRVDLGGSF 622 G SS + S + TL E G+P + + + P PPG + R+ W A + ++ G Sbjct: 35 GASSAESSSGSETLSEE-GEPSRFSCRSQPPRPPGGALGTRLPAAWAPA-RVALERGVPT 92 Query: 623 HTYPYAGGPFQSLEEAEKA 679 P+ GG + + A Sbjct: 93 LPLPHPGGAVLPVPQVSSA 111
>P39935:IF4F1_YEAST Eukaryotic initiation factor 4F subunit p150 - Saccharomyces| cerevisiae (Baker's yeast) Length = 952 Score = 32.3 bits (72), Expect = 6.2 Identities = 22/69 (31%), Positives = 29/69 (42%) Frame = +2 Query: 269 RDLEDAVRARYVSIYLSWHRRSKHRDLPPPSTDRMFHFLFVVADGKQASPPSLQEPAAGV 448 R L++ R+ S +R S RD PP S D Q +PP +EPAA Sbjct: 875 RQLKNNSRSNSRRTNNSSNRHSFRRDAPPASKDSFITTRTYSQRNSQRAPPPKEEPAAPT 934 Query: 449 SSLKESLSA 475 S+ SA Sbjct: 935 STATNMFSA 943
>Q864S8:BRCA2_FELCA Breast cancer type 2 susceptibility protein homolog - Felis| silvestris catus (Cat) Length = 3372 Score = 32.3 bits (72), Expect = 6.2 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +2 Query: 392 VADGKQASPPSLQEPAAGVSSLKES-LSATTLEENSGQPDQDTVMAPTPSPPGS 550 VAD K+ P++ +P+ S +++S + TL+ S PD+ + + P P P S Sbjct: 718 VADRKEEILPAVSQPSVPYSEVEDSGIHFQTLKSFSSDPDKSSQLTPHPRDPPS 771
>O95359:TACC2_HUMAN Transforming acidic coiled-coil-containing protein 2 - Homo sapiens| (Human) Length = 2948 Score = 32.0 bits (71), Expect = 8.1 Identities = 20/69 (28%), Positives = 30/69 (43%) Frame = +2 Query: 338 HRDLPPPSTDRMFHFLFVVADGKQASPPSLQEPAAGVSSLKESLSATTLEENSGQPDQDT 517 H LPP + + + D +AS PS +PA +S +S EE P+ T Sbjct: 1907 HAGLPPSAAEHIVSPSAPAGDRVEASTPSCPDPAKDLSRSSDS------EEAFETPESTT 1960 Query: 518 VMAPTPSPP 544 + P+PP Sbjct: 1961 PVKAPPAPP 1969
>P49796:RGS3_HUMAN Regulator of G-protein signaling 3 - Homo sapiens (Human)| Length = 1198 Score = 32.0 bits (71), Expect = 8.1 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = -1 Query: 509 DPAAQSSPPMS*RSATP*GTRHLQQVPATKEVKPASHPPPRTGSGTSYRLKGGADP 342 +PA P S SAT G+ P +K+V P PPP L G +P Sbjct: 733 EPAPSQEPLSSKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLSPCQDLPAGQEP 788 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 303,382,808 Number of extensions: 7147852 Number of successful extensions: 21926 Number of sequences better than 10.0: 9 Number of HSP's gapped: 21907 Number of HSP's successfully gapped: 9 Length of query: 568 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 449 Effective length of database: 68,045,334 Effective search space: 30552354966 Effective search space used: 30552354966 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)