ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf25i13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001063259.1| Oryza sativa (japonica cultivar-group) Os06g... 92 8e-15
2dbj|AK073180.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 8e-15
3ref|NM_001068665.1| Oryza sativa (japonica cultivar-group) Os08g... 84 2e-12
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 80 3e-11
5dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic D... 80 3e-11
6emb|CT832958.1| Oryza sativa (indica cultivar-group) cDNA clone:... 68 1e-07
7ref|NM_001068664.1| Oryza sativa (japonica cultivar-group) Os08g... 68 1e-07
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-07
9dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-07
10dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-07
11dbj|AK065332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-07
12emb|CT828873.1| Oryza sativa (indica cultivar-group) cDNA clone:... 64 2e-06
13ref|NM_001068666.1| Oryza sativa (japonica cultivar-group) Os08g... 46 0.42
14ref|NM_001063251.1| Oryza sativa (japonica cultivar-group) Os06g... 46 0.42
15dbj|AK068098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.42
16dbj|AK063440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.42
17gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 44 1.6
18gb|AY192738.1| Presbytis entellus apolipoprotein B (APOB) gene, ... 44 1.6
19gb|AY192732.1| Nasalis larvatus apolipoprotein B (APOB) gene, ex... 44 1.6
20gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, com... 44 1.6
21gb|AC004860.1|AC004860 Homo sapiens PAC clone RP4-691L7 from 7, ... 44 1.6
22dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 44 1.6
23gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome... 44 1.6
24ref|XM_415577.2| PREDICTED: Gallus gallus hypothetical LOC417305... 42 6.5
25ref|NM_117255.2| Arabidopsis thaliana PLDGAMMA1; phospholipase D... 42 6.5
26gb|AE009279.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 6.5
27gb|AE008333.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 6.5
28gb|AY814505.1| Schistosoma japonicum SJCHGC06326 protein mRNA, c... 42 6.5
29gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome... 42 6.5
30dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 42 6.5
31gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome ... 42 6.5
32gb|AY099569.1| Arabidopsis thaliana putative phospholipase D-gam... 42 6.5
33emb|AL772195.4| Mouse DNA sequence from clone RP23-218C5 on chro... 42 6.5
34emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, ... 42 6.5
35emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, B... 42 6.5
36ref|XM_958697.1| Neurospora crassa OR74A hypothetical protein (N... 42 6.5
37gb|BT002140.1| Arabidopsis thaliana putative phospholipase D-gam... 42 6.5
38gb|AF027408.1|AF027408 Arabidopsis thaliana phospholipase D-gamm... 42 6.5
39emb|AL645854.10| Mouse DNA sequence from clone RP23-192P17 on ch... 42 6.5 
>ref|NM_001063259.1| Oryza sativa (japonica cultivar-group) Os06g0136100 (Os06g0136100)
           mRNA, complete cds
          Length = 1481
 Score = 91.7 bits (46), Expect = 8e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                       
Query: 851 caagctttggtggacaagtataatgaggatcacaatcttttgggggattttgcttatgaa 910
           |||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 759 caagctttagtggagaagtataatgaggatcataatcttttgggggattttgcgtatgaa 818

             
Query: 911 ct 912
           ||
Sbjct: 819 ct 820
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>dbj|AK073180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000O24, full
           insert sequence
          Length = 1482

 Score = 91.7 bits (46), Expect = 8e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                       
Query: 851 caagctttggtggacaagtataatgaggatcacaatcttttgggggattttgcttatgaa 910
           |||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 760 caagctttagtggagaagtataatgaggatcataatcttttgggggattttgcgtatgaa 819

             
Query: 911 ct 912
           ||
Sbjct: 820 ct 821
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>ref|NM_001068665.1| Oryza sativa (japonica cultivar-group) Os08g0495200 (Os08g0495200)
           mRNA, complete cds
          Length = 1224

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 849 ttcaagctttggtggacaagtataatgaggatcacaatcttttgggggat 898
           |||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 650 ttcaagctttagtggacaagtataatgaggatcacaatctttttggggat 699



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 957 ggtactatcatctcaatttcac 978
           ||||||||||||||||||||||
Sbjct: 758 ggtactatcatctcaatttcac 779
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                                
Query: 849      ttcaagctttggtggacaagtataatgaggatcacaatcttttggggg 896
                |||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 24442685 ttcaagctttagtggacaagtataatgaggatcacaatctttttgggg 24442732



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 851      caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
                ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 24403436 caagcattagtggacaagtataatgatgatcacaatcttttggggg 24403481



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 863      gacaagtataatgaggatcacaatcttttggggg 896
                |||||||||||||| |||||||||||||||||||
Sbjct: 24448276 gacaagtataatgatgatcacaatcttttggggg 24448309



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                            
Query: 592      ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
                |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 24402451 ttacatcagggttgatcttcagggatctttccacacatatcctgatgtgggtgggccatt 24402510

                                                        
Query: 652      tcagagcctagaggaagctgagaaagccatggatcgctat 691
                ||| |||  | |||||||||| || || || |||||||||
Sbjct: 24402511 tcaaagctcacaggaagctgacaaggctattgatcgctat 24402550



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 955      gtggtactatcatctcaatttcac 978
                ||||||||||||||||||||||||
Sbjct: 24403811 gtggtactatcatctcaatttcac 24403834



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                            
Query: 592      ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
                |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 24447274 ttacatcagggttgatcttcagggatctttccacacatatcctaatgtgggtgggccatt 24447333

                                                        
Query: 652      tcagagcctagaggaagctgagaaagccatggatcgctat 691
                ||| |||  | ||||| |||| || || || |||||||||
Sbjct: 24447334 tcaaagctcacaggaaactgacaaggctattgatcgctat 24447373



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 1066     ggtcagctgcttctgcatgattaatcctacagataatgg 1104
                ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 24403934 ggtcagctgtttctgcgtgattaatcctattgataatgg 24403972



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 956      tggtactatcatctcaatttcac 978
                |||||||||||||||||||||||
Sbjct: 24448477 tggtactatcatctcaatttcac 24448499



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 957      ggtactatcatctcaatttcac 978
                ||||||||||||||||||||||
Sbjct: 24442890 ggtactatcatctcaatttcac 24442911
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>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1142B04
          Length = 161964

 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                             
Query: 849   ttcaagctttggtggacaagtataatgaggatcacaatcttttggggg 896
             |||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 58401 ttcaagctttagtggacaagtataatgaggatcacaatctttttgggg 58448



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 851   caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
             ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 19152 caagcattagtggacaagtataatgatgatcacaatcttttggggg 19197



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 863   gacaagtataatgaggatcacaatcttttggggg 896
             |||||||||||||| |||||||||||||||||||
Sbjct: 63992 gacaagtataatgatgatcacaatcttttggggg 64025



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                         
Query: 592   ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
             |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 18167 ttacatcagggttgatcttcagggatctttccacacatatcctgatgtgggtgggccatt 18226

                                                     
Query: 652   tcagagcctagaggaagctgagaaagccatggatcgctat 691
             ||| |||  | |||||||||| || || || |||||||||
Sbjct: 18227 tcaaagctcacaggaagctgacaaggctattgatcgctat 18266



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 955   gtggtactatcatctcaatttcac 978
             ||||||||||||||||||||||||
Sbjct: 19527 gtggtactatcatctcaatttcac 19550



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                         
Query: 592   ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
             |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 62990 ttacatcagggttgatcttcagggatctttccacacatatcctaatgtgggtgggccatt 63049

                                                     
Query: 652   tcagagcctagaggaagctgagaaagccatggatcgctat 691
             ||| |||  | ||||| |||| || || || |||||||||
Sbjct: 63050 tcaaagctcacaggaaactgacaaggctattgatcgctat 63089



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 1066  ggtcagctgcttctgcatgattaatcctacagataatgg 1104
             ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 19650 ggtcagctgtttctgcgtgattaatcctattgataatgg 19688



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 956   tggtactatcatctcaatttcac 978
             |||||||||||||||||||||||
Sbjct: 64193 tggtactatcatctcaatttcac 64215



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 957   ggtactatcatctcaatttcac 978
             ||||||||||||||||||||||
Sbjct: 58606 ggtactatcatctcaatttcac 58627
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>emb|CT832958.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F21, full
           insert sequence
          Length = 1751

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 851 caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
           ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 694 caagcattagtggacaagtataatgatgatcacaatcttttggggg 739



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 592 ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
           |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 429 ttacatcagggttgatcttcagggatctttccacacatatcctgatgtgggtgggccatt 488

                                                   
Query: 652 tcagagcctagaggaagctgagaaagccatggatcgctat 691
           ||| |||  | |||||||||| || || || |||||||||
Sbjct: 489 tcaaagctcacaggaagctgacaaggctattgatcgctat 528



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 955  gtggtactatcatctcaatttcac 978
            ||||||||||||||||||||||||
Sbjct: 1069 gtggtactatcatctcaatttcac 1092



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 1066 ggtcagctgcttctgcatgattaatcctacagataatgg 1104
            ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 1192 ggtcagctgtttctgcgtgattaatcctattgataatgg 1230
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>ref|NM_001068664.1| Oryza sativa (japonica cultivar-group) Os08g0494400 (Os08g0494400)
           mRNA, partial cds
          Length = 1791

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 851 caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
           ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 696 caagcattagtggacaagtataatgatgatcacaatcttttggggg 741



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 592 ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
           |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 431 ttacatcagggttgatcttcagggatctttccacacatatcctgatgtgggtgggccatt 490

                                                   
Query: 652 tcagagcctagaggaagctgagaaagccatggatcgctat 691
           ||| |||  | |||||||||| || || || |||||||||
Sbjct: 491 tcaaagctcacaggaagctgacaaggctattgatcgctat 530



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 955  gtggtactatcatctcaatttcac 978
            ||||||||||||||||||||||||
Sbjct: 1071 gtggtactatcatctcaatttcac 1094



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 1066 ggtcagctgcttctgcatgattaatcctacagataatgg 1104
            ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 1194 ggtcagctgtttctgcgtgattaatcctattgataatgg 1232
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                             
Query: 851     caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
               |||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 1914585 caagctttagtggagaagtataatgaggatcataatcttttggggg 1914540



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 851     caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
               |||||||| || || ||||| ||||| ||||| |||||||||||||
Sbjct: 1805341 caagctttagttgagaagtacaatgatgatcataatcttttggggg 1805386
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>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0001H02
          Length = 147160

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                            
Query: 851    caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
              |||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 115063 caagctttagtggagaagtataatgaggatcataatcttttggggg 115018



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 851  caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
            |||||||| || || ||||| ||||| ||||| |||||||||||||
Sbjct: 5819 caagctttagttgagaagtacaatgatgatcataatcttttggggg 5864
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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548D03
          Length = 156709

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 851   caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
             |||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 43365 caagctttagtggagaagtataatgaggatcataatcttttggggg 43320
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>dbj|AK065332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K10, full
           insert sequence
          Length = 1792

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 851 caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
           ||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 697 caagcattagtggacaagtataatgatgatcacaatcttttggggg 742



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 592 ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
           |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 432 ttacatcagggttgatcttcagggatctttccacacatatcctgatgtgggtgggccatt 491

                                                   
Query: 652 tcagagcctagaggaagctgagaaagccatggatcgctat 691
           ||| |||  | |||||||||| || || || |||||||||
Sbjct: 492 tcaaagctcacaggaagctgacaaggctattgatcgctat 531



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 955  gtggtactatcatctcaatttcac 978
            ||||||||||||||||||||||||
Sbjct: 1072 gtggtactatcatctcaatttcac 1095



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 1066 ggtcagctgcttctgcatgattaatcctacagataatgg 1104
            ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 1195 ggtcagctgtttctgcgtgattaatcctattgataatgg 1233
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>emb|CT828873.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109H19, full
           insert sequence
          Length = 1407

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 851 caagctttggtggacaagtataatgaggatcacaatcttttggg 894
           ||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 584 caagcattagtggacaagtataatgatgatcacaatcttttggg 627



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 592 ttacatcagggtcgatctcgggggctctttccacacgtatccttatgcgggagggccgtt 651
           |||||||||||| |||||   ||| ||||||||||| |||||| ||| ||| ||||| ||
Sbjct: 319 ttacatcagggttgatcttcagggatctttccacacatatcctgatgtgggtgggccatt 378

                                                   
Query: 652 tcagagcctagaggaagctgagaaagccatggatcgctat 691
           ||| |||  | |||||||||| || || || |||||||||
Sbjct: 379 tcaaagctcacaggaagctgacaaggctattgatcgctat 418



 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 955 gtggtactatcatctcaatttcac 978
           ||||||||||||||||||||||||
Sbjct: 687 gtggtactatcatctcaatttcac 710



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 1066 ggtcagctgcttctgcatgattaatcctacagataatgg 1104
            ||||||||| |||||| ||||||||||||  ||||||||
Sbjct: 810  ggtcagctgtttctgcgtgattaatcctattgataatgg 848
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>ref|NM_001068666.1| Oryza sativa (japonica cultivar-group) Os08g0495300 (Os08g0495300)
           mRNA, complete cds
          Length = 732

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 956 tggtactatcatctcaatttcac 978
           |||||||||||||||||||||||
Sbjct: 298 tggtactatcatctcaatttcac 320
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>ref|NM_001063251.1| Oryza sativa (japonica cultivar-group) Os06g0134500 (Os06g0134500)
           mRNA, complete cds
          Length = 1398

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 863 gacaagtataatgaggatcacaatcttttgggggattttgcttatgaactcaaag 917
           |||| |||||| || || ||||||||||||| |||| |||||| ||| |||||||
Sbjct: 844 gacatgtataacgatgaccacaatcttttggaggatcttgcttttgagctcaaag 898
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>dbj|AK068098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135D15, full
           insert sequence
          Length = 1529

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 863 gacaagtataatgaggatcacaatcttttgggggattttgcttatgaactcaaagatgt 921
           |||| ||||||||| ||||||| |||||| |||| | |||| || || |||||||||||
Sbjct: 860 gacatgtataatgacgatcacagtcttttagggggtcttgcatacgagctcaaagatgt 918
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>dbj|AK063440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E11, full
           insert sequence
          Length = 1398

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 863 gacaagtataatgaggatcacaatcttttgggggattttgcttatgaactcaaag 917
           |||| |||||| || || ||||||||||||| |||| |||||| ||| |||||||
Sbjct: 844 gacatgtataacgatgaccacaatcttttggaggatcttgcttttgagctcaaag 898
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 851    caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
              |||||||| || || ||||| ||||| ||||| |||||||||||||
Sbjct: 125633 caagctttagttgagaagtacaatgatgatcataatcttttggggg 125678
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>gb|AY192738.1| Presbytis entellus apolipoprotein B (APOB) gene, exon 19 and
           partial cds
          Length = 1217

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 762 aagcagctctttactggcctga 783
           ||||||||||||||||||||||
Sbjct: 661 aagcagctctttactggcctga 682
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>gb|AY192732.1| Nasalis larvatus apolipoprotein B (APOB) gene, exon 19 and partial
           cds
          Length = 1195

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 762 aagcagctctttactggcctga 783
           ||||||||||||||||||||||
Sbjct: 644 aagcagctctttactggcctga 665
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>gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, complete sequence
          Length = 173677

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 656   agcctagaggaagctgagaaag 677
             ||||||||||||||||||||||
Sbjct: 70270 agcctagaggaagctgagaaag 70249
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>gb|AC004860.1|AC004860 Homo sapiens PAC clone RP4-691L7 from 7, complete sequence
          Length = 136225

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 656    agcctagaggaagctgagaaag 677
              ||||||||||||||||||||||
Sbjct: 111794 agcctagaggaagctgagaaag 111815
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0679C08
          Length = 156266

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 851    caagctttggtggacaagtataatgaggatcacaatcttttggggg 896
              |||||||| || || ||||| ||||| ||||| |||||||||||||
Sbjct: 130490 caagctttagttgagaagtacaatgatgatcataatcttttggggg 130535
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>gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome 6, complete sequence
          Length = 177971

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 1246   ggaagcaaagaagaaagagctcagag 1271
              |||||||||||||| |||||||||||
Sbjct: 128463 ggaagcaaagaagacagagctcagag 128488
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>ref|XM_415577.2| PREDICTED: Gallus gallus hypothetical LOC417305 (LOC417305), mRNA
          Length = 2557

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1213 ttcagagtggagctactgggattat 1237
            |||||||||||||||||| ||||||
Sbjct: 585  ttcagagtggagctactgtgattat 609
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>ref|NM_117255.2| Arabidopsis thaliana PLDGAMMA1; phospholipase D (PLDGAMMA1) mRNA,
            complete cds
          Length = 3069

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 804  aatcagatcacactgagagag 824
            |||||||||||||||||||||
Sbjct: 2923 aatcagatcacactgagagag 2903
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>gb|AE009279.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 49 of 187
             of the complete sequence
          Length = 12141

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1064  tcggtcagctgcttctgcatg 1084
             |||||||||||||||||||||
Sbjct: 10322 tcggtcagctgcttctgcatg 10342
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>gb|AE008333.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 137 of
            187 of the complete sequence
          Length = 10241

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1064 tcggtcagctgcttctgcatg 1084
            |||||||||||||||||||||
Sbjct: 2021 tcggtcagctgcttctgcatg 2001
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>gb|AY814505.1| Schistosoma japonicum SJCHGC06326 protein mRNA, complete cds
          Length = 1535

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1361 ctttgtgtatgagagccagag 1381
            |||||||||||||||||||||
Sbjct: 455  ctttgtgtatgagagccagag 435
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>gb|AC141638.3| Mus musculus BAC clone RP23-415K1 from chromosome 7, complete sequence
          Length = 190553

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1367  gtatgagagccagagagctgg 1387
             |||||||||||||||||||||
Sbjct: 21860 gtatgagagccagagagctgg 21880
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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 659    ctagaggaagctgagaaagcc 679
              |||||||||||||||||||||
Sbjct: 620953 ctagaggaagctgagaaagcc 620933
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>gb|AC155933.3| Mus musculus BAC clone RP23-89K6 from chromosome 7, complete sequence
          Length = 265770

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1367  gtatgagagccagagagctgg 1387
             |||||||||||||||||||||
Sbjct: 45345 gtatgagagccagagagctgg 45325
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>gb|AY099569.1| Arabidopsis thaliana putative phospholipase D-gamma (At4g11850) mRNA,
            complete cds
          Length = 2894

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 804  aatcagatcacactgagagag 824
            |||||||||||||||||||||
Sbjct: 2786 aatcagatcacactgagagag 2766
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>emb|AL772195.4| Mouse DNA sequence from clone RP23-218C5 on chromosome 11 Contains the
             5' end of the Ugp2 gene for  UDP-glucose pyrophosphorylase
             2, two novel genes, a cytoplasmic dynein light chain 1
             (Dnclc1) pseudogene, a RAB5A member RAS oncogene family
             (Rab5a) pseudogene, a novel pseudogene and a CpG island,
             complete sequence
          Length = 173182

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1367  gtatgagagccagagagctgg 1387
             |||||||||||||||||||||
Sbjct: 61502 gtatgagagccagagagctgg 61482
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>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32
          Length = 198788

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 804    aatcagatcacactgagagag 824
              |||||||||||||||||||||
Sbjct: 180205 aatcagatcacactgagagag 180225
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>emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, BAC clone T26M18 (ESSA project)
          Length = 90824

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 804   aatcagatcacactgagagag 824
             |||||||||||||||||||||
Sbjct: 42905 aatcagatcacactgagagag 42925
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>ref|XM_958697.1| Neurospora crassa OR74A hypothetical protein (NCU03068.1) partial
            mRNA
          Length = 663

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1334 tttgtgccggagggcagcggagagg 1358
            |||||||||||| ||||||||||||
Sbjct: 592  tttgtgccggagagcagcggagagg 616
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>gb|BT002140.1| Arabidopsis thaliana putative phospholipase D-gamma (At4g11850) mRNA,
            complete cds
          Length = 2678

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 804  aatcagatcacactgagagag 824
            |||||||||||||||||||||
Sbjct: 2660 aatcagatcacactgagagag 2640
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>gb|AF027408.1|AF027408 Arabidopsis thaliana phospholipase D-gamma mRNA, complete cds
          Length = 3234

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 804  aatcagatcacactgagagag 824
            |||||||||||||||||||||
Sbjct: 2963 aatcagatcacactgagagag 2943
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>emb|AL645854.10| Mouse DNA sequence from clone RP23-192P17 on chromosome 11, complete
             sequence
          Length = 211829

 Score = 42.1 bits (21), Expect = 6.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1627  ataaagagtacataatactct 1647
             |||||||||||||||||||||
Sbjct: 89355 ataaagagtacataatactct 89375


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 282,599,257
Number of extensions: 14615617
Number of successful extensions: 276328
Number of sequences better than 10.0: 39
Number of HSP's gapped: 276328
Number of HSP's successfully gapped: 70
Length of query: 1706
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1683
Effective length of database: 18,503,978,556
Effective search space: 31142195909748
Effective search space used: 31142195909748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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