ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf28d08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068973:Os02g0504100 | 144 | 2e-34 | 2 | AK119778:Os12g0407300 | 34 | 0.24 | 3 | AK071435:Os08g0144100 | 33 | 0.70 | 4 | Os01g0364800:Os01g0364800 | 32 | 1.6 | 5 | AK107458:Os08g0270500 | 31 | 2.0 | 6 | AK066297:Os04g0544100 | 31 | 2.0 | 7 | D78504:Os01g0158000 | 31 | 2.7 | 8 | AK103127:Os01g0158000 | 31 | 2.7 | 9 | AK058679:Os01g0158000 | 31 | 2.7 | 10 | Os09g0309300:Os09g0309300 | 31 | 2.7 | 11 | Os01g0255700:Os01g0255700 | 30 | 3.5 | 12 | AK064584:Os04g0286500 | 30 | 3.5 | 13 | Os03g0789400:Os03g0789400 | 30 | 3.5 | 14 | AK072880:Os03g0857500 | 30 | 4.5 | 15 | Os01g0516900:Os01g0516900 | 30 | 5.9 | 16 | AK072503:Os12g0620400 | 30 | 5.9 | 17 | AK066673:Os01g0694200 | 30 | 5.9 | 18 | AK059006:Os12g0620400 | 30 | 5.9 | 19 | AK066400:Os07g0467500 | 30 | 5.9 | 20 | Os03g0691700:Os03g0691700 | 29 | 7.7 | 21 | AK110881:Os09g0507300 | 29 | 7.7 |
|---|
>AK068973:Os02g0504100 | Length = 107 Score = 144 bits (362), Expect = 2e-34 Identities = 69/97 (71%), Positives = 81/97 (83%) Frame = +2 Query: 947 RILKNIDPEVEDAIKSLVSSAIVDPDAKGGLRWAFGNESIGERFSIVGVWHTSYKAFRNK 1126 +++ + EV++AI LVSSA++DPD KGGLRW G ESI ERFSIVGVWHT+YKAFRN+ Sbjct: 5 KVIWFLQAEVKNAINCLVSSAVIDPDVKGGLRWPLGKESIDERFSIVGVWHTNYKAFRNE 64 Query: 1127 TLRLKLRCADRFDHRSSTGEISNEVTFKLTGISKRLQ 1237 LRLKLR ADRFDHRSSTGE+SNEVTFKL GIS L+ Sbjct: 65 KLRLKLRHADRFDHRSSTGEVSNEVTFKLIGISASLE 101
>AK119778:Os12g0407300 | Length = 707 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/43 (41%), Positives = 20/43 (46%) Frame = -2 Query: 1352 LVSIPKLKARSYRSKQYPRSSAPQTPTSPSECPPLDSHPAVSW 1224 L S P R+ P SS P TP+S S PP HPA W Sbjct: 81 LTSEPAPTPRAPSRHATPSSSPPSTPSSASAPPPSGRHPAFPW 123
>AK071435:Os08g0144100 | Length = 196 Score = 32.7 bits (73), Expect = 0.70 Identities = 24/84 (28%), Positives = 40/84 (47%) Frame = -1 Query: 447 MAATAASVEPGEIFGEEGARTRGLAPVFRSMGSQGKGTRREDSASSEPGGKGGSGDQRET 268 +AAT ++ P G G R + R++G G+ +A+ EPG GG GD+ E Sbjct: 71 LAATVSAYVPE---GAAGLRFEDFDALHRALGDALFGSLDGAAAAGEPG--GGGGDEEEE 125 Query: 267 QPAAWMILLLDGRRWWRPRGLEEM 196 A+ + +DG + L+E+ Sbjct: 126 MREAFKVFDVDGDGFISASELQEV 149
>Os01g0364800:Os01g0364800 | Length = 472 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/50 (34%), Positives = 30/50 (60%) Frame = +2 Query: 728 KLTDLEFDSSKEHYHVKVFDKQRSDSTMSCKCTVQEDGKLAIHKVELNQI 877 KLTD++ ++H + +FDK +SD ++ K Q + + A +K E +QI Sbjct: 87 KLTDVKKKYFQQHGGLILFDKMKSDQGLAFKVFTQAELEHATNKFEKSQI 136
>AK107458:Os08g0270500 | Length = 88 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +2 Query: 290 PPFPPGSDDAESSRLVPFPCDPIERKTGAKPLVLAPSSP 406 PP PP S A +R P P+ R PL LAP P Sbjct: 43 PPLPPSSATARRTRPHFLPLPPLPRLADLSPLNLAPVPP 81
>AK066297:Os04g0544100 | Length = 841 Score = 31.2 bits (69), Expect = 2.0 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = -1 Query: 441 ATAASVEPGEIFGEEGARTRGLAPVFRSMGSQGKGTRREDSASSEPGGKGGSGDQRETQ 265 A AA+V G + G G + RGL +GS G + + GSGD R + Sbjct: 40 AAAAAVAGGGVAGTPGGKGRGLGASGEGVGSSGGRGDPQSRRCTRSASAKGSGDARSVE 98
>D78504:Os01g0158000 | Length = 528 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/45 (40%), Positives = 28/45 (62%) Frame = -3 Query: 1357 MYLSAYPSSRLDLIGQNSIPDHLHRRLQHPLQSVHLLIPILQSLG 1223 +YLSA + LI ++S+P L RL +++ LLIP+L+ LG Sbjct: 288 VYLSALSDRGISLIVRSSVPQLLIGRL-FSSENLQLLIPVLRGLG 331
>AK103127:Os01g0158000 | Length = 528 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/45 (40%), Positives = 28/45 (62%) Frame = -3 Query: 1357 MYLSAYPSSRLDLIGQNSIPDHLHRRLQHPLQSVHLLIPILQSLG 1223 +YLSA + LI ++S+P L RL +++ LLIP+L+ LG Sbjct: 288 VYLSALSDRGISLIVRSSVPQLLIGRL-FSSENLQLLIPVLRGLG 331
>AK058679:Os01g0158000 | Length = 528 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/45 (40%), Positives = 28/45 (62%) Frame = -3 Query: 1357 MYLSAYPSSRLDLIGQNSIPDHLHRRLQHPLQSVHLLIPILQSLG 1223 +YLSA + LI ++S+P L RL +++ LLIP+L+ LG Sbjct: 288 VYLSALSDRGISLIVRSSVPQLLIGRL-FSSENLQLLIPVLRGLG 331
>Os09g0309300:Os09g0309300 | Length = 173 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Frame = -1 Query: 444 AATAASVEPGEIFGEEGARTRGLAPVFRSMGSQGKGTRR-----EDSASSEPGGKGGSGD 280 AA AA E G E R RG+ R G G G RR E SA+ G GG G+ Sbjct: 10 AAAAARDEAASGGGGERQRRRGM----RRRGGGGGGERRRGVAEEASAAEARRGGGGGGE 65 Query: 279 QR 274 QR Sbjct: 66 QR 67
>Os01g0255700:Os01g0255700 | Length = 450 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = -3 Query: 349 AGEGNEAGRFGVVGARWE--GRERGPAGDAARGV-DDLVVGRAEV 224 AG+ EAG G AR G E GP GD A GV ++ +V R V Sbjct: 116 AGDHGEAGEAGAAAARGHGGGGEVGPDGDGADGVQEEALVARCVV 160
>AK064584:Os04g0286500 | Length = 417 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Frame = +2 Query: 11 FPAQSTAKFPSF-PFSPPQNLHLVTSSPP 94 F S F +F PF PP N HL SSPP Sbjct: 45 FTQASPPNFQTFNPFGPPANYHLYGSSPP 73
>Os03g0789400:Os03g0789400 | Length = 123 Score = 30.4 bits (67), Expect = 3.5 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = -1 Query: 375 APVFRSMGSQGKGTRRE----DSASSEPGGKGGSGDQRETQPAAWMILLLDGRRWWRPR 211 A + S+G G RR SAS + G + E P +W + + G R WRPR Sbjct: 27 AVLHSSVGDAAGGRRRRRPVAGSASPDLVEDGSRARRSEVAPVSWGMEVAPGGRGWRPR 85
>AK072880:Os03g0857500 | Length = 252 Score = 30.0 bits (66), Expect = 4.5 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -3 Query: 352 IAGEGNEAGRFGVVGARWEG 293 + G+ N AGR GVVG+ W+G Sbjct: 23 LGGQSNMAGRGGVVGSHWDG 42
>Os01g0516900:Os01g0516900 | Length = 2072 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +3 Query: 1014 LILMPKGDLDGHLGMSRLVRGSA*LECGIQAIKLSGIK 1127 LIL+ DLD LGM L R ++C + IKL+ K Sbjct: 1513 LILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAK 1550
>AK072503:Os12g0620400 | Length = 303 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = +2 Query: 293 PFPPGSDD-----AESSRLVPFPCDPIERKTGAKP----LVLAPSSPKISPGSTEAAVAA 445 P P G++ AES P P + E+K AKP AP S P + +AA AA Sbjct: 200 PAPAGTEKEDAKPAESEAAPPAPSEGGEKKEDAKPAEPEAAAAPPSNPTEPSAPKAAAAA 259 Query: 446 IVD 454 V+ Sbjct: 260 PVE 262
>AK066673:Os01g0694200 | Length = 460 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/21 (61%), Positives = 13/21 (61%) Frame = -2 Query: 569 PCPPLPRGSASPPRLPWAAHR 507 P PP P SPPRLP AHR Sbjct: 4 PPPPPPPPPPSPPRLPLTAHR 24
>AK059006:Os12g0620400 | Length = 303 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = +2 Query: 293 PFPPGSDD-----AESSRLVPFPCDPIERKTGAKP----LVLAPSSPKISPGSTEAAVAA 445 P P G++ AES P P + E+K AKP AP S P + +AA AA Sbjct: 200 PAPAGTEKEDAKPAESEAAPPAPSEGGEKKEDAKPAEPEAAAAPPSNPTEPSAPKAAAAA 259 Query: 446 IVD 454 V+ Sbjct: 260 PVE 262
>AK066400:Os07g0467500 | Length = 269 Score = 29.6 bits (65), Expect = 5.9 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -1 Query: 342 KGTRREDSASSEPGGKGGSGDQRETQPAA 256 +G ++DSAS+ PGG GG G E + ++ Sbjct: 4 EGEAKKDSASNPPGGGGGGGGGEEEEDSS 32
>Os03g0691700:Os03g0691700 | Length = 279 Score = 29.3 bits (64), Expect = 7.7 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = -1 Query: 648 PSAPAFAASRTESRETGPPLGPGWNRTLPTLAKR 547 P APAF+ASR S G P G R P +R Sbjct: 160 PPAPAFSASRAVSSRKGAPRGTARARVSPPTYRR 193
>AK110881:Os09g0507300 | Length = 574 Score = 29.3 bits (64), Expect = 7.7 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -1 Query: 633 FAASRTESRETGPPLGPGWNRTLPTLAKRLSF 538 +A++ + T PP GP WN T +A+ SF Sbjct: 321 YASAAVDHPRTPPPTGPRWNDTASRVAQSRSF 352 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 42,170,337 Number of extensions: 989340 Number of successful extensions: 4631 Number of sequences better than 10.0: 21 Number of HSP's gapped: 4611 Number of HSP's successfully gapped: 21 Length of query: 505 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 400 Effective length of database: 11,195,550 Effective search space: 4478220000 Effective search space used: 4478220000 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
