ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK100846:Os01g0521500 32 2.6
2AK107779:Os03g0357500 31 3.4
3AK067227:Os01g0120700 31 3.4
4AK100466:Os01g0698100 30 5.7
5Os02g0730100:Os02g0730100 30 7.5
6AB110701: 30 7.5
7Os05g0457300:Os05g0457300 30 9.8
8Os09g0547900:Os09g0547900 30 9.8
9Os01g0595100:Os01g0595100 30 9.8
10AK109049:Os12g0105500 30 9.8

>AK100846:Os01g0521500 |
          Length = 603
 Score = 31.6 bits (70), Expect = 2.6
 Identities = 28/99 (28%), Positives = 37/99 (37%)
 Frame = -2

Query: 501 QDSGKVASKAYKSISRSCHHHHCEEDADSGDEQGVLVHGRRRQR*GDDEANGGKHQEPHQ 322
           + SG    KA  S  R  HHHH                GR R+   DD+    + +   +
Sbjct: 58  RSSGSKRRKASSSSRRHRHHHHKSS-------------GRSRRSRDDDDERRRRRRRRDE 104

Query: 321 YRVRDTG*VACKAYKCSHHVGRSDSRIEDAEECMRDHLG 205
            R R  G     A + S        R E+A E +RD LG
Sbjct: 105 ERGRRGG----DASESSGSGSEEPDRAEEAREIVRDILG 139



 Score = 30.0 bits (66), Expect = 7.5
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 14/75 (18%)
 Frame = -2

Query: 906 RIHDSGKVASKAYKSISRSCHHHH-----CEEDADSGDEQRVLVHGRRRQRYADD----- 757
           R   SG    KA  S  R  HHHH          D  DE+R     RRR+R  ++     
Sbjct: 56  RSRSSGSKRRKASSSSRRHRHHHHKSSGRSRRSRDDDDERR-----RRRRRRDEERGRRG 110

Query: 756 ----EANGGKHQQPD 724
               E++G   ++PD
Sbjct: 111 GDASESSGSGSEEPD 125



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>AK107779:Os03g0357500 |
          Length = 264

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 789 HGRRRQRYADDEANGGKHQQPDH*RIHDSEQVHQY-RVYNSGQVARKSKNCIQW 631
           HGRR +   DD+  GG     DH   HD +  H++    +  +  R  ++C +W
Sbjct: 170 HGRRGRLRGDDDDEGGGGDDDDH---HDDDDDHEHDHDEHHDEELRAYRDCCRW 220



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>AK067227:Os01g0120700 |
          Length = 285

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 5/194 (2%)
 Frame = -2

Query: 888 KVASKAYKSISRSCHHHHCEEDADSGDEQRVLVHGRRRQRYADDEANGGK-HQQPDH*RI 712
           K+ S+ ++    S      + D+D   + R     +R +++   +++  K H++    R 
Sbjct: 47  KLKSRKHRRRGHSSSDSESDSDSDGDRKHRKRKDRKRHRKHGHSDSDEAKRHKRRSKRRS 106

Query: 711 HDSEQVHQYRVYNSGQVARKSKNCIQWRSXXXXXXXXXXXXXXXGVLTRQR*GDDGANDA 532
            DS        Y+SG    + +N  + RS                        D  A+D 
Sbjct: 107 SDSSDDTDSDEYDSGS---EEENRRKKRSHRRKHRRHSSR------------SDSDASDY 151

Query: 531 KHQQPRH*SVQDSGKVASKAYKSISRSC-HHHHCEEDADSG---DEQGVLVHGRRRQR*G 364
                   S  D  + +SK   S SRS  HHHH     DSG   +E+G   H ++  R  
Sbjct: 152 --------SSDDEERRSSKKDHSSSRSHRHHHHRSSGDDSGSESEERGRSRH-KKHHRSS 202

Query: 363 DDEANGGKHQEPHQ 322
           D++A    +   H+
Sbjct: 203 DEDATSDSNNHKHR 216



 Score = 30.4 bits (67), Expect = 5.7
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = -2

Query: 897 DSGKVASKAYKSISRS-CHHHHCEEDADSGDE------QRVLVHGRRRQRYADDEANGGK 739
           D  + +SK   S SRS  HHHH     DSG E       R   H R     A  ++N  K
Sbjct: 155 DEERRSSKKDHSSSRSHRHHHHRSSGDDSGSESEERGRSRHKKHHRSSDEDATSDSNNHK 214

Query: 738 HQQ 730
           H++
Sbjct: 215 HRR 217



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>AK100466:Os01g0698100 |
          Length = 900

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
 Frame = -2

Query: 549  DGANDAKHQQPRH*SVQDSGKVASKAYKSISRSCHHHHCEEDADSGDEQGVLVHGRRRQR 370
            +G+N AK ++       DS    ++A K   +    HH E D ++ D +    H R++ R
Sbjct: 719  EGSNLAKQEK-------DSDDERNRARKYRKK----HHPESDEENYDSEESYKHSRKKHR 767

Query: 369  *GDDEANGG---KHQ--------EPHQYRVRDTG*VACKAYKC--SHHVGRSDSRIEDAE 229
              D  A+     KH+        EP  +R RD+       ++   S H  R D    + +
Sbjct: 768  SEDSRAHTSDVHKHKLKRHSKDLEPRHHRHRDSSSEDEHEHRSSKSRHRHRDDYHYHEDD 827

Query: 228  ECMRDHLGIGSGQKQSRSISPATR--SLPWSPRTSVLPLVS 112
            E    H      Q+  RS S   +      S +T VLP VS
Sbjct: 828  EHRSSH----RHQRDHRSSSKRKKDDDRDKSKQTIVLPEVS 864



 Score = 29.6 bits (65), Expect = 9.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 13/66 (19%)
 Frame = -2

Query: 840 HHCEEDADSGDEQRVLVHGRRRQRYADDEANGG---KHQ--------QPDH*RIHD--SE 700
           HH E D ++ D +    H R++ R  D  A+     KH+        +P H R  D  SE
Sbjct: 744 HHPESDEENYDSEESYKHSRKKHRSEDSRAHTSDVHKHKLKRHSKDLEPRHHRHRDSSSE 803

Query: 699 QVHQYR 682
             H++R
Sbjct: 804 DEHEHR 809



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>Os02g0730100:Os02g0730100 |
          Length = 402

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 48  SATGEGGQAHHRLLLRAWPPSRRLAGAPTSLATTATSVLQARCCATASAHCQSPSDLSYT 227
           S+ G+G    + LL +A     RL    + LA       +AR C  + +     S L++T
Sbjct: 290 SSLGDGLGKGYGLLGQAGSGKLRLLAGQSRLAAKVAKRFKARSCDRSESRSGLTSTLAFT 349

Query: 228 PLH-LQFSNQICRHD 269
           P+  ++ SN +  +D
Sbjct: 350 PVQGMELSNPLVHND 364



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>AB110701: |
          Length = 342

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 18/78 (23%), Positives = 35/78 (44%)
 Frame = -2

Query: 930 KHQQPDH*RIHDSGKVASKAYKSISRSCHHHHCEEDADSGDEQRVLVHGRRRQRYADDEA 751
           +H++ DH +  D    A +   S     HHHH E++ +  +E   +   RR+  + ++E+
Sbjct: 200 EHEEDDHEQA-DEASPAVERLISFHHRRHHHHEEDNHEQREEGAPMKRFRRQHHHYEEES 258

Query: 750 NGGKHQQPDH*RIHDSEQ 697
                +   H    D E+
Sbjct: 259 EMRTKRFHQHHHKDDDER 276



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>Os05g0457300:Os05g0457300 |
          Length = 279

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 45  PSATGEGGQAHHRLLLRAWPPSRRLAGAPTS 137
           PSA G G  AHH L  R+ P   R A A T+
Sbjct: 186 PSACGIGALAHHELQRRSLPSPPRAAAAATA 216



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>Os09g0547900:Os09g0547900 |
          Length = 1229

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +1

Query: 1738 EETKVEHKRDMEKIISLGSNLLAEEIKDLKHDVLYQGAIQRLVIYMVTVLIITMGCMIVG 1917
            E+ K++ K     I+S   N    EI+DL HD L    +   V+ +  V++      +  
Sbjct: 468  EKIKLKLKNAPADILSTKFNEACAEIRDLWHDFLEISVLDFRVVILPHVMVFIWERFLQR 527

Query: 1918 FTENAYGELIN 1950
             +E A  E +N
Sbjct: 528  MSEKAASESVN 538



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>Os01g0595100:Os01g0595100 |
          Length = 837

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = -2

Query: 549 DGANDAKHQQPRH*SVQDSGKVA---SKAYKSISRSCH-HHHCEEDADSGDEQGVL 394
           D     KH   RH  V+     A    KA++    S   HHH EED  S + +G+L
Sbjct: 687 DELQSVKHHLKRHLRVEGFRMAARGLKKAFRWFPHSNEDHHHLEEDEGSSERRGLL 742



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>AK109049:Os12g0105500 |
          Length = 280

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +1

Query: 652 LPGYLAGIVYPVLVYLLGIVYPLVVWLLVFAAISFVVCI--PLPSSAMDEHPLLISTVSI 825
           L G+LA I+Y    +L G V      ++ F   S    I   LP S   +  L +   S+
Sbjct: 183 LAGFLASILYMCYFHLFGFVEESWTMVIAFGVTSLSAAIVESLPISTRLDDNLTVPLASV 242

Query: 826 LLTVVV 843
           L+ V+V
Sbjct: 243 LIGVLV 248


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 73,153,332
Number of extensions: 1807383
Number of successful extensions: 6420
Number of sequences better than 10.0: 10
Number of HSP's gapped: 6387
Number of HSP's successfully gapped: 13
Length of query: 777
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 669
Effective length of database: 11,075,427
Effective search space: 7409460663
Effective search space used: 7409460663
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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