>Q53198:Y4UE_RHISN Putative transposase y4uE - Rhizobium sp. (strain NGR234)|
          Length = 359
 Score = 35.8 bits (81), Expect = 0.82
 Identities = 20/66 (30%), Positives = 24/66 (36%)
 Frame = +3

Query: 1089 PCTRVAAGVCRHQLRHQHRVPSITAAAGHGQVPITHVHCPHLPNSGADENAMEYNSWPRR 1268
            PC R  A       R   R+          Q P  + HCPH P   A +       WP R
Sbjct: 293  PCARYIAPAAAQGRRRNDRIR---------QRPRHYAHCPHPPRQPAAQTGASSAGWPDR 343

Query: 1269 LPSRDR 1286
             P R+R
Sbjct: 344  QPHRNR 349

>P31602:CITN_KLEPN Citrate-sodium symporter - Klebsiella pneumoniae|
          Length = 446

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = +1

Query: 661 YLAGIVYPVLVYLLGIVYPLVVWLLVFAAISFVVCIPLPSSAMDEHPLLISTVSILLTVV 840
           Y+ G   PV+++L+   +       V+A I     I   S+ MD+   L   +++L+T  
Sbjct: 78  YIGGA--PVMIFLVAAYF-------VYAGIFTQKEIDAISNVMDKSNFLNLFIAVLITGA 128

Query: 841 VMTTPRDTLV-SLAGYLPGIVYPLVVWLLVFAAISFVVCIPL 963
           +++  R  L+ SL GY+P I+  +V   +   AI  V  IP+
Sbjct: 129 ILSVNRRLLLKSLLGYIPTILMGIVGASIFGIAIGLVFGIPV 170

>Q6R8F2:CADH1_BOVIN Epithelial-cadherin precursor - Bos taurus (Bovine)|
          Length = 882

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -2

Query: 888 KVASKAYKSISRSCHHHHCEEDADSGDEQRVLV-----HGRRRQR 769
           K+++K    +S   HHHH   D+ SG +  VL      HG RRQ+
Sbjct: 109 KLSTKVTLEVSAHHHHHHSHHDSPSGTQTEVLTFPGPHHGLRRQK 153



 Score = 34.3 bits (77), Expect = 2.4
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -2

Query: 489 KVASKAYKSISRSCHHHHCEEDADSGDEQGVLV-----HGRRRQR 370
           K+++K    +S   HHHH   D+ SG +  VL      HG RRQ+
Sbjct: 109 KLSTKVTLEVSAHHHHHHSHHDSPSGTQTEVLTFPGPHHGLRRQK 153

>P50175:PENK_MESAU Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin|
           - Mesocricetus auratus (Golden hamster)
          Length = 268

 Score = 33.5 bits (75), Expect = 4.0
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = +3

Query: 138 LATTATSVLQARC---CATASAHCQSPSDLSYTPLHLQFSNQICRHDGY-TCKPCRLPSR 305
           L +   + +QA C   CA  S H  SP D+++    L+   Q+  H  + TCK     S+
Sbjct: 14  LGSCLLATVQAECSQDCAKCSYHLVSPGDINFLACTLECEGQMPSHKIWETCKDLLQVSK 73

Query: 306 YRVPCTGV 329
              PC  +
Sbjct: 74  PEFPCDSI 81

>P52172:SRP_DROME Box A-binding factor - Drosophila melanogaster (Fruit fly)|
          Length = 1264

 Score = 32.7 bits (73), Expect = 6.9
 Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
 Frame = +3

Query: 48   SATGEGGQAHHRLLLRAWPPSRRLAGAPTSLA------TTATSVLQARCCATASAH---C 200
            S++  G  + H+LL +  P S   A A  + A      T A S+     C+TASA     
Sbjct: 1064 SSSNSGSTSDHQLLAQLLPNSITAAAAAAAAAAAAAIKTEALSLTSQANCSTASAGLMVT 1123

Query: 201  QSPSDLSYTPLHLQFSNQICRHDGY------TCKPCR-LPSRYRVP 317
             +P+  S T   L  SN I   + Y       CKP R  P  Y  P
Sbjct: 1124 STPTTASSTLSSLSHSNIISLQNPYHQAGMTLCKPTRPSPPYYLTP 1169

>P54516:YQHR_BACSU Uncharacterized protein yqhR - Bacillus subtilis|
          Length = 178

 Score = 32.3 bits (72), Expect = 9.0
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
 Frame = +1

Query: 241 NSRIRSADMMATLVSLAGYLAGIAYPV---LVWLLVFAAIS-FVVSLPLPSSAMDEHPL- 405
           N + +    MA  V+  G+  G+ +     + +L  F+ IS  ++  P       +H L 
Sbjct: 15  NEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFHFSEISPNMILQPFVLGEWKKHGLG 74

Query: 406 ------LISTVSIFLTVVVMTTPRDTLVSLAGYLPGILYTLVAWLLVFGVISSI 549
                 LI  +SI    +        L  L    PGILY LV WLLVF V + I
Sbjct: 75  TVISIILIGVISIGAAFLYFLL----LKRLKTMWPGILYGLVLWLLVFFVFNPI 124

>Q98937:FOXD1_CHICK Forkhead box protein D1 - Gallus gallus (Chicken)|
          Length = 440

 Score = 32.3 bits (72), Expect = 9.0
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 831 EEDADSGDEQRVLVHGRRRQRYADDEANGGKHQQPDH*RIHD 706
           EED +  +E+    H RRR+ YA+DE    + ++ D   +HD
Sbjct: 24  EEDDEEDEEEPQPRHRRRRRSYAEDEEEEEEEEEEDAGDLHD 65


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 425,819,502
Number of extensions: 9661785
Number of successful extensions: 27854
Number of sequences better than 10.0: 7
Number of HSP's gapped: 27800
Number of HSP's successfully gapped: 8
Length of query: 777
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 656
Effective length of database: 67,496,744
Effective search space: 44277864064
Effective search space used: 44277864064
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)