| Clone Name | FLbaf34c05 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os10g11060:12010.t00907:unspliced-genomic ACI13, putative, expressed| Length = 3742 Score = 72.5 bits (152), Expect(7) = 2e-51 Identities = 30/37 (81%), Positives = 34/37 (91%) Frame = +3 / +1 Query: 213 KYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEH 323 +YI+ENYSKIRDVEKELENL+LE+KLTAGPKKA H Sbjct: 1669 RYIQENYSKIRDVEKELENLSLEMKLTAGPKKAGS*H 1779 Score = 54.2 bits (112), Expect(7) = 2e-51 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = +3 / +1 Query: 570 GINTVQHATTNSVRQQPTSQNLANAISPASNVHEPATSGTQQQ 698 G+NT QHATT+SV QQ +QN NA SPA+N + ++ +QQQ Sbjct: 3256 GMNTAQHATTSSVPQQAAAQNPQNAPSPANNANHDSSGLSQQQ 3384 Score = 52.8 bits (109), Expect(7) = 2e-51 Identities = 19/21 (90%), Positives = 21/21 (100%) Frame = +3 / +1 Query: 759 VMVLPKGRGSSGSGWTGAGFE 821 VM+LPKGRGSSGSGWTGAGF+ Sbjct: 3445 VMILPKGRGSSGSGWTGAGFD 3507 Score = 45.1 bits (92), Expect(7) = 2e-51 Identities = 18/32 (56%), Positives = 23/32 (71%) Frame = +2 / +3 Query: 470 VGSRECGFTIFEVRRIKKAFRMSKSHQGFC*C 565 +G RE F IF++R K+AFR+ KS GFC*C Sbjct: 3060 LGPRERRFPIFKIRGAKEAFRIPKSQPGFC*C 3155 Score = 41.8 bits (85), Expect(7) = 2e-51 Identities = 18/18 (100%), Positives = 18/18 (100%) Frame = +3 / +1 Query: 312 ALEHLRKKIEISTERIRL 365 ALEHLRKKIEISTERIRL Sbjct: 1867 ALEHLRKKIEISTERIRL 1920 Score = 38.2 bits (77), Expect(7) = 2e-51 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +3 / +3 Query: 138 DGLARDSPVLAYTEKVIAEEQLQ 206 DGLAR++PV+AYTEKV A Q Q Sbjct: 156 DGLARENPVIAYTEKVRAGGQAQ 224 Score = 24.9 bits (48), Expect(7) = 2e-51 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +3 / +1 Query: 450 LCDDLNRLV 476 LCDDLNRLV Sbjct: 2923 LCDDLNRLV 2949 Score = 51.9 bits (107), Expect(7) = 2e-37 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = -1 / -3 Query: 574 IPETSTEALMGFRHSKRLFNSSNLEYCEAALS*T 473 + ETSTEA +GFR SKR F+SSNLE EAALS T Sbjct: 3164 LTETSTEARLGFRDSKRFFSSSNLENWEAALSWT 3063 Score = 44.1 bits (90), Expect(7) = 2e-37 Identities = 21/43 (48%), Positives = 22/43 (51%) Frame = -1 / -3 Query: 697 CCCVPLVAGSWTLLAGEIAFARFCDVGCCRTELVVACCTVLIP 569 CC + L AG AF FC C TELVVACC V IP Sbjct: 3383 CCWDSPLESWLALFAGLGAF*GFCAAAC*GTELVVACCAVFIP 3255 Score = 44.1 bits (90), Expect(7) = 2e-37 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -1 / -3 Query: 373 TLAKRILSVEISIFFLKCSSA 311 TLA RILSV+ISIFFLKCSSA Sbjct: 1928 TLANRILSVDISIFFLKCSSA 1866 Score = 43.2 bits (88), Expect(7) = 2e-37 Identities = 17/26 (65%), Positives = 19/26 (73%) Frame = -2 / -1 Query: 825 MFQIQHLSILIQSFPFPWGGPSHRLS 748 + Q QHLSIL +F FPWGG SH LS Sbjct: 3511 LHQTQHLSILTLNFLFPWGGSSHPLS 3434 Score = 36.3 bits (73), Expect(7) = 2e-37 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -3 / -2 Query: 323 MLECCFLWSSCQFNF*SQIL 264 ML CFLW SC F+F*+QIL Sbjct: 1779 MLTTCFLWPSC*FHF*TQIL 1720 Score = 34.1 bits (68), Expect(7) = 2e-37 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -2 / -2 Query: 177 RCRPGRGSLWRGRQGRS 127 RCR RGS WRGR+GRS Sbjct: 195 RCRR*RGSPWRGRRGRS 145 Score = 27.2 bits (53), Expect(7) = 2e-37 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -1 / -2 Query: 217 YFFSCSCSSAMT 182 +FFSCSCSS +T Sbjct: 384 HFFSCSCSSKIT 349 Score = 48.7 bits (100), Expect(7) = 4e-34 Identities = 17/24 (70%), Positives = 19/24 (79%) Frame = +2 / +3 Query: 749 ERRCDGPPQGKGKLWIRMDRCWI* 820 ER CD PPQGK K +RMDRCW+* Sbjct: 3435 ERGCDDPPQGKRKFRVRMDRCWV* 3506 Score = 46.9 bits (96), Expect(7) = 4e-34 Identities = 20/37 (54%), Positives = 28/37 (75%) Frame = +2 / +3 Query: 200 AATEEIY*GKLFQNSGC*EGA*ESDSRS*TDSWTKES 310 + +I+ G+LFQNS C*+GA ES+ R+ T+SW KES Sbjct: 1656 STVSQIHSGELFQNS*C*KGARESEFRNETNSWAKES 1766 Score = 45.1 bits (92), Expect(7) = 4e-34 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +2 / +3 Query: 572 YQHCTACYH*FGTAATHITKSSECNLPCKQC 664 Y++CTAC H F +A TKSS+C PCK C Sbjct: 3258 YEYCTACNHKFSASAGCGTKSSKCT*PCK*C 3350 Score = 40.9 bits (83), Expect(7) = 4e-34 Identities = 22/40 (55%), Positives = 24/40 (60%) Frame = +3 / +1 Query: 450 LCDDLNRLVQESAASQYSXXXXXXXXXXCLNPIRASVDVS 569 L D L+ VQESAASQ+S LNP RASVDVS Sbjct: 3040 LIDRLDY*VQESAASQFSRLEELKKRLESLNPSRASVDVS 3159 Score = 40.5 bits (82), Expect(7) = 4e-34 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = +2 / +3 Query: 308 SSTRAFEEKD*DFN*ENTFG*GERGRCKK 394 SST AF++KD*+ N ENT G*GERG K+ Sbjct: 1863 SST*AFKKKD*NINRENTVG*GERGTGKE 1949 Score = 24.4 bits (47), Expect(7) = 4e-34 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +3 / +2 Query: 174 TEKVIAEEQLQLKK 215 + +VI EEQLQLKK Sbjct: 341 SSQVILEEQLQLKK 382 Score = 23.1 bits (44), Expect(7) = 4e-34 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +1 / +1 Query: 133 ALTASPETPPSWPTP 177 A TASP PS PTP Sbjct: 151 APTASPGRTPSSPTP 195 Score = 42.8 bits (87), Expect(6) = 5e-22 Identities = 20/33 (60%), Positives = 21/33 (63%) Frame = -2 / -1 Query: 570 QKHQQKP*WDLDILNAFLILLTSNIVKPHSLEP 472 Q+HQQKP WDL ILNA L L I K SL P Sbjct: 3160 QRHQQKPGWDLGILNASLAPLILKIGKRRSLGP 3062 Score = 39.6 bits (80), Expect(6) = 5e-22 Identities = 17/28 (60%), Positives = 19/28 (67%) Frame = -3 / -2 Query: 395 LFCIVLFHLSQTYSLS*NLNLFPQMLEC 312 L C+ LFH SQ YSL * NLF ML+C Sbjct: 1950 LLCLFLFHPSQPYSLC*YFNLFS*MLKC 1867 Score = 38.6 bits (78), Expect(6) = 5e-22 Identities = 16/21 (76%), Positives = 16/21 (76%) Frame = -3 / -2 Query: 818 KSSTCPS*SRASPSLGEDHHT 756 K STCPS* S SLGEDHHT Sbjct: 3504 KPSTCPS*P*TSSSLGEDHHT 3442 Score = 33.1 bits (66), Expect(6) = 5e-22 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -2 / -1 Query: 678 WRAHGHCLQGRLHSLDFVMWVAAVPN*W*HAVQC*Y 571 W H LQG +H DFV A N W HAVQ Y Sbjct: 3364 WSHGWHYLQG*VHFEDFVPQPAEALNLWLHAVQYSY 3257 Score = 29.9 bits (59), Expect(6) = 5e-22 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -1 / -1 Query: 202 SCSSAMTFSV*ARTGESLAR 143 +C A TFSV*A TG SLAR Sbjct: 220 ACPPARTFSV*AMTGFSLAR 161 Score = 24.9 bits (48), Expect(6) = 5e-22 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = -1 / -3 Query: 730 DDPCFISALAGCCCVPLVAGSWTLL 656 D F+SA AG CC SW L Sbjct: 3419 DGLLFLSASAGLCCWDSPLESWLAL 3345 Score = 53.3 bits (110), Expect(3) = 2e-15 Identities = 34/89 (38%), Positives = 45/89 (50%) Frame = +1 / +2 Query: 553 LLLMFLVSTLYSMLPLIRYGSNPHHKI*RMQSPLQAMSMSPPPAEHSNNLPRRK*SRDHQ 732 L ++ V L+SM P ++ S HKI +M LQ M P S+ + R+ Sbjct: 3239 LYVIIRV*ILHSMQPQVQCLSRLRHKILKMHLALQIMPTMTPADYPSSKDLPMQKGREDH 3418 Query: 733 TREEEGEAV*WSSPREGEALDQDGQVLDL 819 + + GE V* SSPRE E QDGQVL L Sbjct: 3419 HKWDGGEGV**SSPREEEVQGQDGQVLGL 3505 Score = 40.5 bits (82), Expect(3) = 2e-15 Identities = 18/27 (66%), Positives = 20/27 (74%) Frame = +1 / +2 Query: 310 QHSSI*GKRLRFQLREYVWLR*KRTMQ 390 QH SI* KRL++Q REY WL *KR Q Sbjct: 1865 QHLSI*EKRLKYQQREYGWLG*KRNRQ 1945 Score = 35.0 bits (70), Expect(3) = 2e-15 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +1 / +2 Query: 478 KRVRLHNIRG*KN*KGV*NV*IPSGLLLMFL 570 KR L N + *++*+ V*N *IP+GLLLM L Sbjct: 3068 KRAPLPNFQD*RS*RSV*NP*IPAGLLLMSL 3160 Score = 32.7 bits (65), Expect(3) = 3e-05 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 / -3 Query: 820 SNPAPVHPDPE 788 SNPAPVHPDPE Sbjct: 3506 SNPAPVHPDPE 3474 Score = 31.8 bits (63), Expect(3) = 3e-05 Identities = 15/22 (68%), Positives = 16/22 (72%) Frame = -2 / -1 Query: 381 PLSP*PNVFSQLKSQSFSSNAR 316 PLSP*P VFS L QSF NA+ Sbjct: 1936 PLSP*PTVFSLLIFQSFFLNAQ 1871 Score = 29.0 bits (57), Expect(3) = 3e-05 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = -3 / -2 Query: 569 RNINRSPDGI*TF*TPF*FF*PRIL*SRTLLNQPVKVV 456 R+INRSP GI* F*T * * L S LL+ +K + Sbjct: 3159 RDINRSPAGI*GF*TLL*LL*S*KLGSGALLDLIIKSI 3046
>LOC_Os03g59240:12003.t05172:unspliced-genomic carboxyl-terminal peptidase, putative, expressed| Length = 3795 Score = 28.6 bits (56), Expect(2) = 0.16 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = +3 / -1 Query: 780 RGSSGSGWTGAGF 818 R SS SGW GAGF Sbjct: 144 RSSSSSGWVGAGF 106 Score = 26.3 bits (51), Expect(2) = 0.16 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +1 / -1 Query: 673 PPPAEHSNNLPRRK*SRDHQTREE 744 PPP+ N PRR+* R R + Sbjct: 252 PPPSSSPTNSPRRR*PRRRSPRAD 181
>LOC_Os03g04020:12003.t00283:unspliced-genomic expansin-like 3 precursor, putative, expressed| Length = 2175 Score = 36.8 bits (74), Expect = 0.25 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 / -2 Query: 634 RFCDVGCCRTELVVACCTVLIP 569 RFCD CR ++V CC V +P Sbjct: 1208 RFCDTNTCRLLMIVLCCAVFLP 1143
>LOC_Os01g52570:12001.t04683:unspliced-genomic lachrymatory-factor synthase precursor, putative, expressed| Length = 1017 Score = 35.0 bits (70), Expect = 0.91 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 / -2 Query: 727 DPCFISALAGCCCVPLVAGSWTL 659 +PC +A A CC +P+ G WTL Sbjct: 155 EPCASAAAAACCIMPVENGDWTL 87
>LOC_Os11g26500:12011.t02266:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4426 Score = 34.5 bits (69), Expect = 1.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 / -2 Query: 712 SALAGCCCVPLVAGSWTLLAGEIA 641 S LAGCCCV +W+L+A +A Sbjct: 915 SLLAGCCCVEAANRTWSLIADVVA 844
>LOC_Os02g10990:12002.t00947:unspliced-genomic UVR3, putative, expressed| Length = 3458 Score = 34.1 bits (68), Expect = 1.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +3 / +2 Query: 591 ATTNSVRQQPTSQNLANAISPASNVHEPATSGTQQQPA 704 A+ +S R PTS + A +PAS+ PAT+ T P+ Sbjct: 215 ASASSSRASPTSTRASAASAPASSSSAPATTATSPAPS 328
>LOC_Os04g53990:12004.t04872:unspliced-genomic DNA binding protein, putative, expressed| Length = 2881 Score = 34.1 bits (68), Expect = 1.7 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 / -1 Query: 721 CFISALAGCCCVPLVAGSWTLLAGEIAFARFCDVG 617 C+ A AGCCC GS LL+ E + DVG Sbjct: 928 CWSPAKAGCCCCCFAVGSMRLLSSEDWNPPYGDVG 824
>LOC_Os04g13220:12004.t01143:unspliced-genomic multidrug resistance-associated protein 4, putative, expressed| Length = 8557 Score = 34.1 bits (68), Expect = 1.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 / +1 Query: 975 CLQLTSLKNNMFYCCTKYIHFQHSSSNQAIV 883 CL ++S K + YCCTKY++ H IV Sbjct: 6298 CLAISSRKVFLKYCCTKYLYGSHLVEETRIV 6390
>LOC_Os02g21170:12002.t01907:unspliced-genomic hypothetical protein| Length = 468 Score = 34.1 bits (68), Expect = 1.7 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -2 / -2 Query: 738 PSLMIPASFPPWQVVAVFRWWRAHGHCL 655 PSLM S PP V+ V R+ R HG C+ Sbjct: 314 PSLMATLSSPPAAVITVDRFLRQHGWCI 231
>LOC_Os07g43780:12007.t04022:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1505 Score = 33.6 bits (67), Expect = 2.4 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -2 / -1 Query: 975 CLQLTSLKNNMFYCCTKYIHFQH 907 CLQ S + N+F+CC +YI +H Sbjct: 944 CLQAFSDQFNLFFCCLEYIRTEH 876
>LOC_Os08g23829:12008.t02154:unspliced-genomic conserved hypothetical protein| Length = 1395 Score = 33.1 bits (66), Expect = 3.2 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +3 Query: 710 GNEAGIIKLGRKRERRCDGPPQGKGKLWIRMDRCW 814 G AG++ + R+R RR G G+G W + R W Sbjct: 663 GARAGVVDVARRRRRRGRGGGFGRGGCWRGVGRRW 767
>LOC_Os12g36760:12012.t03356:unspliced-genomic expressed protein| Length = 10372 Score = 30.4 bits (60), Expect(2) = 3.3 Identities = 14/51 (27%), Positives = 26/51 (50%) Frame = -2 / +1 Query: 939 YCCTKYIHFQHSSSNQAIVLYQHNHANSFKYITTDPSIMFQIQHLSILIQS 787 +CC + HF + + +V + ++ +S K++ D F I HL L+ S Sbjct: 4366 FCCYIFNHFTLAVLSFLVVNHFGSYLSSHKFLLFDDLYTFVINHLYFLLIS 4518 Score = 26.3 bits (51), Expect(2) = 3.3 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -2 / +1 Query: 681 WWRAHGHCLQGRLHSLDF 628 WW+ HG L G + +L F Sbjct: 6505 WWKRHGVVLDGEIAALFF 6558
>LOC_Os06g19900:12006.t01807:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7240 Score = 26.7 bits (52), Expect(2) = 3.9 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 / -2 Query: 674 RHQRNTATTCQGGNEAGIIKLGRKRERRCD 763 R +R+ GG + G + GR+RERR D Sbjct: 558 RRRRDDHGEAAGGGKYGGDRHGRRRERRSD 469 Score = 23.1 bits (44), Expect(2) = 3.9 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = +3 / -2 Query: 777 GRGSSGSGW 803 GRG GSGW Sbjct: 354 GRGGGGSGW 328
>LOC_Os02g49840:12002.t04568:unspliced-genomic MADS-box transcription factor 57, putative, expressed| Length = 6094 Score = 32.7 bits (65), Expect = 4.4 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -1 / -2 Query: 706 LAGCCCVPLVAGSWTLLAGEIAFARFCDVGCC 611 L C +P +A +W + F RFC +G C Sbjct: 2574 LGTCSNLPPLAHAWLAALANLKFRRFCTIGLC 2479
>LOC_Os10g35490:12010.t02845:unspliced-genomic epoxide hydrolase, putative, expressed| Length = 2114 Score = 29.0 bits (57), Expect(2) = 4.9 Identities = 11/36 (30%), Positives = 14/36 (38%) Frame = -2 / -2 Query: 774 WGGPSHRLSLFLPSLMIPASFPPWQVVAVFRWWRAH 667 WG H L L + + PW+ A W R H Sbjct: 781 WGSS*HLHKLLLDLNVFSCLYSPWESTASLEWPRGH 674 Score = 24.9 bits (48), Expect(2) = 4.9 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = -1 / -2 Query: 688 VPLVAGSWTLLAGEIAFARFCDVGCCRTELVVA 590 V LV W A + A DV CC + VVA Sbjct: 247 VRLVTDGWHKDAHTLCEASSADVFCCFCQFVVA 149
>LOC_Os01g50010:12001.t04438:unspliced-genomic clathrin assembly protein, putative, expressed| Length = 6023 Score = 29.5 bits (58), Expect(2) = 5.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 / +3 Query: 14 RKKKDPAEGNNRQRLKESGSGSRR 85 RKK A+G R++ K G GSRR Sbjct: 108 RKK*SEAKGGEREKKKSRGGGSRR 179 Score = 25.8 bits (50), Expect(2) = 5.0 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = +2 / +2 Query: 479 RECGFTIFEVRRIKKAFRMSKSHQ 550 +ECGF ++ R+ +S++HQ Sbjct: 1808 KECGFCNYQTSRMTPPLLVSRAHQ 1879
>LOC_Os11g38920:12011.t03435:unspliced-genomic HVA22-like protein c, putative, expressed| Length = 4461 Score = 26.7 bits (52), Expect(3) = 5.8 Identities = 8/21 (38%), Positives = 16/21 (76%) Frame = -1 / -1 Query: 946 HVLLLHKIYTLSTFQFQPSNR 884 H++L+HK T+ +Q +P+N+ Sbjct: 3099 HIILVHKGCTIEVWQDKPANK 3037 Score = 24.4 bits (47), Expect(3) = 5.8 Identities = 11/41 (26%), Positives = 21/41 (51%) Frame = -1 / -2 Query: 613 CRTELVVACCTVLIPETSTEALMGFRHSKRLFNSSNLEYCE 491 C +V+ CT++ ++ R+S RLFN ++ C+ Sbjct: 1517 CPKLALVSLCTMIATRHE*QSTK**RNSSRLFNHTHSPACD 1395 Score = 23.1 bits (44), Expect(3) = 5.8 Identities = 12/44 (27%), Positives = 19/44 (43%) Frame = -2 / -3 Query: 165 GRGSLWRGRQGRSXXXXXXXXXAVQPFRREPDPLSFNLWRLLPS 34 G G GR R + ++PDP+S L+ +LP+ Sbjct: 394 GGGGESEGRAVRLTDPARTSKFLARTLSKDPDPISPPLFPILPA 263
>LOC_Os10g09470:12010.t00763:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3173 Score = 32.2 bits (64), Expect = 6.1 Identities = 12/44 (27%), Positives = 24/44 (54%) Frame = -1 / -3 Query: 658 LAGEIAFARFCDVGCCRTELVVACCTVLIPETSTEALMGFRHSK 527 L E++F+RFCD C T++ + + L ++ + + RH + Sbjct: 2163 LPRELSFSRFCDFSSCSTQMCLRLTSSLPQSSACRSCVLVRHPR 2032
>LOC_Os06g33970:12006.t03093:unspliced-genomic VQ motif family protein, expressed| Length = 882 Score = 32.2 bits (64), Expect = 6.1 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 / -1 Query: 697 CCCVPLVAGSWTLLAGE 647 CCC L+A WT +AGE Sbjct: 99 CCCCSLLAAPWTSIAGE 49
>LOC_Os03g44840:12003.t03868:unspliced-genomic expressed protein| Length = 4221 Score = 32.2 bits (64), Expect = 6.1 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -1 / +3 Query: 721 CFISALAGCCCVPLVAGSWTL 659 CF+SA+ G LVAGSW L Sbjct: 2982 CFLSAVTGGALASLVAGSWAL 3044
>LOC_Os02g54520:12002.t05031:unspliced-genomic myb-like DNA-binding domain containing protein, expressed| Length = 4137 Score = 32.2 bits (64), Expect = 6.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 / +1 Query: 710 GNEAGIIKLGRKRERRCDGPPQGKGKLWIR 799 GN +L R E RC G +G+G+ WI+ Sbjct: 352 GNRGDTGELSRDGESRCGGRARGRGEAWIQ 441
>LOC_Os02g35144:12002.t05508:unspliced-genomic RING-H2 finger protein ATL1G, putative, expressed| Length = 3421 Score = 32.2 bits (64), Expect = 6.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 / +3 Query: 732 LMIPASFPPWQVVAVFRWWRAH 667 L P + PP V + F WWRAH Sbjct: 651 LHFPPTLPPIAVCSFFVWWRAH 716
>LOC_Os01g39960:12001.t03522:unspliced-genomic lycopene epsilon cyclase, chloroplast precursor, putative,| expressed Length = 3738 Score = 32.2 bits (64), Expect = 6.1 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = -1 / +2 Query: 697 CCCVPLVAGSWTLL 656 CCC+P + G+WT+L Sbjct: 758 CCCLPYLCGAWTIL 799
>LOC_Os01g23990:12001.t02123:unspliced-genomic expressed protein| Length = 554 Score = 27.6 bits (54), Expect(2) = 6.4 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = -2 / -2 Query: 765 PSHRLSLFLPSLMIPASFPPWQVVAVFRWW 676 P++R +L LP P PW ++ WW Sbjct: 175 PAYRSTLDLPPPPPPMPSEPWLMIFFVVWW 86 Score = 24.0 bits (46), Expect(2) = 6.4 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -1 / -2 Query: 946 HVLLLHKIYTLSTFQFQPS 890 HVL +HK +T ST +PS Sbjct: 511 HVLYMHKDHTASTS*ARPS 455
>LOC_Os09g27050:12009.t02384:unspliced-genomic RSH2, putative, expressed| Length = 3554 Score = 24.9 bits (48), Expect(2) = 7.5 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = -2 / +2 Query: 684 RWWRAHGHCLQGRL 643 RWW G CL G + Sbjct: 2672 RWWNGLGGCLHGNV 2713 Score = 24.0 bits (46), Expect(2) = 7.5 Identities = 10/20 (50%), Positives = 10/20 (50%) Frame = -1 / +1 Query: 856 FQVYNYRSQHHVSNPAPVHP 797 F Y YRS H V VHP Sbjct: 2506 FAFYRYRSLHTVVMSENVHP 2565
>LOC_Os06g40450:12006.t03741:unspliced-genomic WDL1, putative, expressed| Length = 4837 Score = 31.8 bits (63), Expect = 8.3 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 / +3 Query: 374 HLSQTYSLS*NLNLFPQMLECCFLWSSCQFNF*SQIL 264 H++ +Y L * LFP L C FL+S NF IL Sbjct: 4725 HMTISYFLG*KNLLFPYELPCLFLFSK*AINFVHSIL 4835
>LOC_Os02g33240:12002.t02967:unspliced-genomic F-box domain containing protein, expressed| Length = 1206 Score = 31.8 bits (63), Expect = 8.3 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +3 / -1 Query: 648 SPASNVHEPATSGTQQQPAKAEMKQ 722 SPA +VH PA + QQ PA+ ++++ Sbjct: 651 SPARHVHRPAGARVQQDPAQLQLRR 577
>LOC_Os11g36470:12011.t03194:unspliced-genomic cysteine-type endopeptidase/ double-stranded DNA binding protein,| putative, expressed Length = 19413 Score = 31.8 bits (63), Expect = 8.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 / +3 Query: 640 MQSPLQAMSMSPPPAEHSNNLPRRK*SRDHQTREE 744 +Q+PL M+PPP E SN L R R + E Sbjct: 195 LQAPLSMTMMTPPPLEVSNRLSARARER*RERERE 299
>LOC_Os11g22130:12011.t01883:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2189 Score = 31.8 bits (63), Expect = 8.4 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -2 / +3 Query: 915 FQHSSSNQAIVLYQHNHANSFKYITTDPSIMFQIQHLSILIQSFPF 778 F S+ I Y H+ S I+ DP F I + +++ SFP+ Sbjct: 2037 FPFSTHKFTIHTYAHS*PESMSCISVDPLFDFAIYVMQVMLYSFPY 2174
>LOC_Os06g36940:12006.t03389:unspliced-genomic expressed protein| Length = 1927 Score = 31.8 bits (63), Expect = 8.4 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 / -1 Query: 707 GGNEAGIIKLGRKRERRCDGPPQGKGKLWIRMDRC 811 GG G + GR+R RR PP+G + + RC Sbjct: 148 GGPRGGARRCGRRRRRRGRAPPRGSRRRGTPVARC 44
>LOC_Os01g15350:12001.t01386:unspliced-genomic zinc finger CCCH type domain-containing protein ZFN-like 3,| putative, expressed Length = 5623 Score = 30.4 bits (60), Expect(2) = 8.5 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 / -3 Query: 625 HKI*RMQSPLQAMSMSPPPAEHSNNLPRRK*SRDHQTREE 744 H + + P + SPPP + S PRR+ SRD ++ E Sbjct: 308 HLLLLLPPPPPRTAPSPPPPQTSPPSPRRRSSRDRRSETE 189 Score = 24.0 bits (46), Expect(2) = 8.5 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +1 / -1 Query: 451 YVTTLTGWFKRVRLHNI 501 Y TLTGW K + L I Sbjct: 4888 YQVTLTGWLKTLWLEGI 4838
>LOC_Os10g06240:12010.t00493:unspliced-genomic transposon protein, putative, unclassified| Length = 2958 Score = 29.0 bits (57), Expect(2) = 8.8 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +2 / +2 Query: 5 AITRKKKDPAEGNNRQRLKESGSGSRR 85 A R ++ +GN R+R +ESG RR Sbjct: 239 AAVRARRVAGDGNRRRRRRESGGSGRR 319 Score = 24.4 bits (47), Expect(2) = 8.8 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +2 / +1 Query: 710 GNEAGIIKLGRKRERRCDGPPQGKG 784 G AG++ + R R RR G G+G Sbjct: 991 GARAGVVDVARGRRRRGRGDGCGRG 1065 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 371,768,378 Number of extensions: 5985213 Number of successful extensions: 29072 Number of sequences better than 10.0: 32 Length of query: 340 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 290 Effective length of database: 52,799,986 Effective search space: 15311995940 Effective search space used: 15311995940 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)