ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf34c05 |
|---|---|
| Clone Library Name | barley_pub |
>Q8NHX4:SPTA3_HUMAN Spermatogenesis-associated protein 3 - Homo sapiens (Human)| Length = 183 Score = 34.3 bits (77), Expect = 0.84 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +3 Query: 576 NTVQHATTNSVRQQPTSQNLANAISPASNVHEPATSGTQQQPA 704 +T QHA++NS QQP+ ++ SP S + T +QPA Sbjct: 17 STSQHASSNSTSQQPSPESTPQQPSPESTPQHSSLETTSRQPA 59
>P52611:FLIH_BORBU Flagellar assembly protein fliH - Borrelia burgdorferi (Lyme| disease spirochete) Length = 306 Score = 34.3 bits (77), Expect = 0.84 Identities = 16/49 (32%), Positives = 28/49 (57%) Frame = +3 Query: 219 IKENYSKIRDVEKELENLTLEVKLTAGPKKAALEHLRKKIEISTERIRL 365 IKE K+ D+E ++ NL E++L K E L K+ E++ E +++ Sbjct: 32 IKEKEGKVYDIESQISNLKEELQLLRDEKLQLEEELAKRQELAKEEVQI 80
>O15197:EPHB6_HUMAN Ephrin type-B receptor 6 precursor - Homo sapiens (Human)| Length = 1006 Score = 33.1 bits (74), Expect = 1.9 Identities = 19/58 (32%), Positives = 21/58 (36%) Frame = +2 Query: 629 KSSECNLPCKQCP*ARHQRNTATTCQGGNEAGIIKLGRKRERRCDGPPQGKGKLWIRM 802 KSS N PC CP H N A E E C GPP +LW + Sbjct: 308 KSSAGNAPCSPCPARSHAPNPAAPVCPCLEGFYRASSDPPEAPCTGPPSAPQELWFEV 365
>Q9ZD55:PPDK_RICPR Pyruvate, phosphate dikinase - Rickettsia prowazekii| Length = 880 Score = 32.7 bits (73), Expect = 2.4 Identities = 17/72 (23%), Positives = 38/72 (52%) Frame = +3 Query: 144 LARDSPVLAYTEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEH 323 +A DS + + +E Q+ K ++E+Y ++D+E +EN L + T K+ A+ Sbjct: 295 IANDSNSMQAMMPEVFKELSQIAKKLEEHYLDMQDIEFTIENNKLYILQTRTAKRTAIAA 354 Query: 324 LRKKIEISTERI 359 + +++ E++ Sbjct: 355 INIAVQMVKEKL 366
>Q4ULI7:PPDK_RICFE Pyruvate, phosphate dikinase - Rickettsia felis (Rickettsia azadi)| Length = 878 Score = 32.7 bits (73), Expect = 2.4 Identities = 17/72 (23%), Positives = 38/72 (52%) Frame = +3 Query: 144 LARDSPVLAYTEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEH 323 +A DS + + +E Q+ K ++E+Y ++D+E +EN L + T K+ A+ Sbjct: 294 IANDSNSMQAMMPEVFKELSQIAKKLEEHYLDMQDIEFTIENNKLYILQTRTAKRTAIAA 353 Query: 324 LRKKIEISTERI 359 + +++ E++ Sbjct: 354 INIAVQMVEEKL 365
>P0C0K6:EPHB6_PANTR Ephrin type-B receptor 6 precursor - Pan troglodytes (Chimpanzee)| Length = 1005 Score = 32.3 bits (72), Expect = 3.2 Identities = 18/58 (31%), Positives = 21/58 (36%) Frame = +2 Query: 629 KSSECNLPCKQCP*ARHQRNTATTCQGGNEAGIIKLGRKRERRCDGPPQGKGKLWIRM 802 K+S N PC CP H N A E E C GPP +LW + Sbjct: 307 KASAGNAPCSPCPARSHAANPAAPVCPCLEGFYRASSDPPEAPCTGPPSAPQELWFEV 364
>O00308:WWP2_HUMAN NEDD4-like E3 ubiquitin-protein ligase WWP2 - Homo sapiens (Human)| Length = 870 Score = 31.6 bits (70), Expect = 5.4 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +3 Query: 603 SVRQQPTSQNLANAISPASNVHEPATSGTQQQPAKAE 713 SV P + +L +PA EP+TSGTQQ PA A+ Sbjct: 262 SVTPNPNTTSLPAPATPAEG-EEPSTSGTQQLPAAAQ 297
>P35748:MYH11_RABIT Myosin-11 - Oryctolagus cuniculus (Rabbit)| Length = 1972 Score = 31.6 bits (70), Expect = 5.4 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 195 EQLQLKKYIKENYSKIRD-VEKELENLTLEVKLTAGPKKAALEHLRKKIEISTERIR 362 EQL+ K K N K + +EKE +L E+++ G K +EH +KK+E+ + ++ Sbjct: 1210 EQLEQFKRAKANLDKTKQTLEKENADLAGELRVL-GQAKQEVEHKKKKLEVQLQELQ 1265
>P43920:CAPP_HAEIN Phosphoenolpyruvate carboxylase - Haemophilus influenzae| Length = 879 Score = 31.6 bits (70), Expect = 5.4 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +3 Query: 204 QLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEHL-RKKIEIS 347 +L K +KE + + +V K +E L +E+ LTA P + L K IEI+ Sbjct: 107 ELFKRLKEQNASVEEVHKTVEKLLIELVLTAHPTETTRRSLIHKHIEIN 155
>Q99JD2:TEKT1_RAT Tektin-1 - Rattus norvegicus (Rat)| Length = 418 Score = 31.2 bits (69), Expect = 7.1 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +3 Query: 174 TEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEHLRKKIE-IST 350 +E+++AE Q +++ K DV K+LE EVK LEHL + E + T Sbjct: 34 SERLVAESQRLVEEIEKTTRKSQSDVNKKLEQRLEEVKFWKKELDDKLEHLVNETEDLLT 93 Query: 351 ERIRL 365 +IRL Sbjct: 94 YKIRL 98
>Q92HI8:PPDK_RICCN Pyruvate, phosphate dikinase - Rickettsia conorii| Length = 878 Score = 31.2 bits (69), Expect = 7.1 Identities = 16/72 (22%), Positives = 38/72 (52%) Frame = +3 Query: 144 LARDSPVLAYTEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEH 323 +A DS + + +E Q+ + ++E+Y ++D+E +EN L + T K+ A+ Sbjct: 294 IANDSNSMQAMMPEVFKELSQIAQKLEEHYLDMQDIEFTIENNKLYILQTRTAKRTAIAA 353 Query: 324 LRKKIEISTERI 359 + +++ E++ Sbjct: 354 INIAVQMVEEKL 365
>Q96LT7:CI072_HUMAN Uncharacterized protein C9orf72 - Homo sapiens (Human)| Length = 481 Score = 31.2 bits (69), Expect = 7.1 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +3 Query: 141 GLARDSPVLAYTEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALE 320 GL+ S LA V+ + L L KYI+++ K + K L NL +++ LTA + Sbjct: 390 GLSLRSTFLAQFLLVLHRKALTLIKYIEDDTQKGKKPFKSLRNLKIDLDLTAEGDLNIIM 449 Query: 321 HLRKKIE 341 L +KI+ Sbjct: 450 ALAEKIK 456
>Q01513:CYAA_PODAN Adenylate cyclase - Podospora anserina| Length = 2145 Score = 31.2 bits (69), Expect = 7.1 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 17 KKKDPAEGNNRQRLKESGSGSRRNG 91 KK DPA+ N R R++E+G RNG Sbjct: 1590 KKHDPADPNERTRIREAGGWVSRNG 1614
>P04460:MYH6_RABIT Myosin-6 - Oryctolagus cuniculus (Rabbit)| Length = 465 Score = 30.8 bits (68), Expect = 9.3 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Frame = +3 Query: 186 IAEEQ---LQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEHLRKKIEISTER 356 I +EQ LQL+K +KEN ++I ++E+E LE + TA +A +E LR + E Sbjct: 291 IEDEQALVLQLQKKLKENQARIEELEEE-----LEAERTA---RAKVEKLRSDLSRELEE 342 Query: 357 I 359 I Sbjct: 343 I 343
>Q02566:MYH6_MOUSE Myosin-6 - Mus musculus (Mouse)| Length = 1938 Score = 30.8 bits (68), Expect = 9.3 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Frame = +3 Query: 186 IAEEQ---LQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEHLRKKIEISTER 356 I +EQ LQL+K +KEN ++I ++E+E LE + TA +A +E LR + E Sbjct: 1096 IEDEQALALQLQKKLKENQARIEELEEE-----LEAERTA---RAKVEKLRSDLSRELEE 1147 Query: 357 I 359 I Sbjct: 1148 I 1148
>P13533:MYH6_HUMAN Myosin-6 - Homo sapiens (Human)| Length = 1939 Score = 30.8 bits (68), Expect = 9.3 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Frame = +3 Query: 186 IAEEQ---LQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALEHLRKKIEISTER 356 I +EQ LQL+K +KEN ++I ++E+E LE + TA +A +E LR + E Sbjct: 1096 IEDEQALALQLQKKLKENQARIEELEEE-----LEAERTA---RAKVEKLRSDLSRELEE 1147 Query: 357 I 359 I Sbjct: 1148 I 1148
>O51125:MUTS2_BORBU MutS2 protein - Borrelia burgdorferi (Lyme disease spirochete)| Length = 780 Score = 30.8 bits (68), Expect = 9.3 Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = +3 Query: 171 YTEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVK---LTAGPKKAALEHLRKKIE 341 Y + ++ E+ ++ K + E +++ K LENL E+K + KA + L K ++ Sbjct: 557 YQDLLLREKNIETK-LLNEQNEFLKNSRKVLENLVREIKEGNINVAKNKAFISDLEKNVD 615 Query: 342 ISTERI 359 + T ++ Sbjct: 616 LKTNKV 621
>Q6F148:GRPE_MESFL Protein grpE - Mesoplasma florum (Acholeplasma florum)| Length = 187 Score = 30.8 bits (68), Expect = 9.3 Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = +3 Query: 144 LARDSPVLAYTEKVIAEEQLQLKKYIKENYSKI-RDVEKELENLTLEVKLTAGPKKAALE 320 L ++ + EK +A E+++ +K ++Y KI +D+EK++E+ E++ + A + Sbjct: 7 LKKEETSVENKEKKVATEEIKKEK---KDYKKIIQDLEKQIESCQKEIEFQKSLRNADIA 63 Query: 321 HLRKK 335 +L KK Sbjct: 64 NLTKK 68
>Q8J207:ERG3_LEPMC C-5 sterol desaturase - Leptosphaeria maculans (Blackleg fungus)| Length = 356 Score = 30.8 bits (68), Expect = 9.3 Identities = 18/44 (40%), Positives = 26/44 (59%) Frame = +3 Query: 576 NTVQHATTNSVRQQPTSQNLANAISPASNVHEPATSGTQQQPAK 707 N +AT +S+RQ+PT A A+ AS +EPAT +P+K Sbjct: 31 NATANATLSSIRQEPT----AYALPHASWQYEPATKYFSIEPSK 70
>Q63603:DOCK9_RAT Dedicator of cytokinesis protein 9 - Rattus norvegicus (Rat)| Length = 720 Score = 30.8 bits (68), Expect = 9.3 Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 3/59 (5%) Frame = +3 Query: 165 LAYTEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALE---HLRK 332 LA E++I E+QL+ ++ +K NY R++ KEL ++ + ++ G K A + HL++ Sbjct: 600 LAVNERLIKEDQLEYQEEMKANY---REIRKELSDIIVP-RICPGEDKRATKFPAHLQR 654
>Q66HC3:CI072_RAT Uncharacterized protein C9orf72 homolog - Rattus norvegicus (Rat)| Length = 481 Score = 30.8 bits (68), Expect = 9.3 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = +3 Query: 141 GLARDSPVLAYTEKVIAEEQLQLKKYIKENYSKIRDVEKELENLTLEVKLTAGPKKAALE 320 GL+ S LA ++ + L L KYI+++ K + K L NL +++ LTA + Sbjct: 390 GLSLRSTFLAQFLLILHRKALTLIKYIEDDTQKGKKPFKSLRNLKIDLDLTAEGDLNIIM 449 Query: 321 HLRKKIE 341 L +KI+ Sbjct: 450 ALAEKIK 456 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 156,271,860 Number of extensions: 3261857 Number of successful extensions: 9612 Number of sequences better than 10.0: 21 Number of HSP's gapped: 9602 Number of HSP's successfully gapped: 21 Length of query: 340 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 226 Effective length of database: 69,416,809 Effective search space: 15688198834 Effective search space used: 15688198834 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
