ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31b21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054651.1| Oryza sativa (japonica cultivar-group) Os02g0747500 (Os02g0747500) mRNA, complete cds Length = 931 Score = 440 bits (222), Expect = e-120 Identities = 465/546 (85%) Strand = Plus / Plus Query: 44 tccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggcccatagtt 103 ||||||||||||||||||||| | || | ||| |||||||||| || ||||| |||||| Sbjct: 150 tccggatctttcctcaaggtggtggtaaagaacttggatgttcttgcggggcctatagtt 209 Query: 104 tcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcctatagat 163 ||||| |||||||| || ||||| ||||||||||| ||||||||||||||| || ||||| Sbjct: 210 tcacttgcttatccactatatgcatctgttcgagcgatagaaacaaaatctgctgtagat 269 Query: 164 gatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgagctcacc 223 ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct: 270 gatcagcaatggctcacatactgggtgttgtactcgtttatcactctatttgagctcact 329 Query: 224 tttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttcaattgc 283 ||| || | ||| |||||||||| ||||| |||||||| | ||| |||||||||||||| Sbjct: 330 ttttctccggtacttgaatggcttcctttatggtcttatgctaaattgtttttcaattgc 389 Query: 284 tggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtgcggcca 343 |||||||||||||||||||| || ||||| || ||||| ||||| || |||||| ||||| Sbjct: 390 tggttggtcttgccctacttcaatggtgctgcacatgtctatgaacactttgtgaggcca 449 Query: 344 atgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaattcagat 403 ||| |||| ||||||||| | || || |||||||| || |||| |||||| | |||||| Sbjct: 450 atggttgtcaaccagcaaatagttaatatctggtacatcccaagaaaggatgagtcagat 509 Query: 404 aaacccgacgatgtaatttcagctgcacagaaatacattgaacaaaatggatctaaagca 463 | |||||| ||||| || |||||||| |||| ||||||||||||||||||||| | ||| Sbjct: 510 agacccgatgatgtgatatcagctgcgcagagatacattgaacaaaatggatcaagagcg 569 Query: 464 tttgagactctcgttaacaagtttaagactacaaacgcgaggcgctctattttggaggag 523 ||||| | ||| ||||||||||||||| || ||||| | |||||||| ||| |||||||| Sbjct: 570 tttgaaagtctggttaacaagtttaaggcttcaaacacaaggcgctccattctggaggag 629 Query: 524 gtagaggtggaaaggagagcgagggccgaacgagaactggaagctagggatgtgaatcca 583 ||||||| ||||| ||||| | ||| |||| |||| ||||| ||||||| |||||| Sbjct: 630 gtagaggctgaaagaagagccaaggctgaactagaagcagaagcaagggatgagaatcct 689 Query: 584 ttcttc 589 |||||| Sbjct: 690 ttcttc 695
>dbj|AK108482.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-F05, full insert sequence Length = 932 Score = 440 bits (222), Expect = e-120 Identities = 465/546 (85%) Strand = Plus / Plus Query: 44 tccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggcccatagtt 103 ||||||||||||||||||||| | || | ||| |||||||||| || ||||| |||||| Sbjct: 151 tccggatctttcctcaaggtggtggtaaagaacttggatgttcttgcggggcctatagtt 210 Query: 104 tcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcctatagat 163 ||||| |||||||| || ||||| ||||||||||| ||||||||||||||| || ||||| Sbjct: 211 tcacttgcttatccactatatgcatctgttcgagcgatagaaacaaaatctgctgtagat 270 Query: 164 gatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgagctcacc 223 ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct: 271 gatcagcaatggctcacatactgggtgttgtactcgtttatcactctatttgagctcact 330 Query: 224 tttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttcaattgc 283 ||| || | ||| |||||||||| ||||| |||||||| | ||| |||||||||||||| Sbjct: 331 ttttctccggtacttgaatggcttcctttatggtcttatgctaaattgtttttcaattgc 390 Query: 284 tggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtgcggcca 343 |||||||||||||||||||| || ||||| || ||||| ||||| || |||||| ||||| Sbjct: 391 tggttggtcttgccctacttcaatggtgctgcacatgtctatgaacactttgtgaggcca 450 Query: 344 atgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaattcagat 403 ||| |||| ||||||||| | || || |||||||| || |||| |||||| | |||||| Sbjct: 451 atggttgtcaaccagcaaatagttaatatctggtacatcccaagaaaggatgagtcagat 510 Query: 404 aaacccgacgatgtaatttcagctgcacagaaatacattgaacaaaatggatctaaagca 463 | |||||| ||||| || |||||||| |||| ||||||||||||||||||||| | ||| Sbjct: 511 agacccgatgatgtgatatcagctgcgcagagatacattgaacaaaatggatcaagagcg 570 Query: 464 tttgagactctcgttaacaagtttaagactacaaacgcgaggcgctctattttggaggag 523 ||||| | ||| ||||||||||||||| || ||||| | |||||||| ||| |||||||| Sbjct: 571 tttgaaagtctggttaacaagtttaaggcttcaaacacaaggcgctccattctggaggag 630 Query: 524 gtagaggtggaaaggagagcgagggccgaacgagaactggaagctagggatgtgaatcca 583 ||||||| ||||| ||||| | ||| |||| |||| ||||| ||||||| |||||| Sbjct: 631 gtagaggctgaaagaagagccaaggctgaactagaagcagaagcaagggatgagaatccc 690 Query: 584 ttcttc 589 |||||| Sbjct: 691 ttcttc 696
>gb|AY110077.1| Zea mays CL20590_1 mRNA sequence Length = 1056 Score = 321 bits (162), Expect = 2e-84 Identities = 303/350 (86%) Strand = Plus / Plus Query: 44 tccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggcccatagtt 103 |||||||||||||||||||| | |||| |||| ||||||| ||||| ||||| | ||| Sbjct: 182 tccggatctttcctcaaggtcttggtcaacaacatggatgtcctcgcggggcctttggtt 241 Query: 104 tcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcctatagat 163 ||||| || |||||||||||||| |||||| ||||||| |||||||||||| || | ||| Sbjct: 242 tcacttgcgtatcctctgtatgcctctgttagagcaattgaaacaaaatctgctgtggat 301 Query: 164 gatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgagctcacc 223 ||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||| Sbjct: 302 gatcagcaatggctcacgtactgggtgctgtactcatttatcactctattcgagctcacc 361 Query: 224 tttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttcaattgc 283 |||||| | ||| | |||||||| ||||| |||||||| | ||| ||||| ||||||||| Sbjct: 362 tttgctccggtactcgaatggcttcctttctggtcttatgcaaagctgttcttcaattgc 421 Query: 284 tggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtgcggcca 343 ||||| || ||||| | || || || || || ||||| ||||||||||||||| ||||| Sbjct: 422 tggttagtattgccacagttcaatggagctgcacatgtatatgagcattttgtgaggcca 481 Query: 344 atgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaagga 393 |||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 482 atgattgtaaatcagcaagttgtaaacatctggtatattccaaagaagga 531 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 503 aggcgctctattttggaggaggtagaggtggaaaggag 540 |||||||| ||| |||||||||||||||| |||||||| Sbjct: 641 aggcgctcaattctggaggaggtagaggttgaaaggag 678
>emb|CT830095.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN065D02, full insert sequence Length = 998 Score = 268 bits (135), Expect = 3e-68 Identities = 303/359 (84%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 |||||||| ||||||||||||||| |||| | || |||| | || || ||||||||||| Sbjct: 64 atggggtctggatctttcctcaagctgctggccaacaacttcgacgtcctcgccgggcca 123 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 |||||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 124 ttagtttcacttgcttatccattatatgcctctgtgagagcaatagaaacaaaatctcct 183 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 184 gttgatgatcagcaatggctcacttactgggtgctgtactcgtttatcactttgtttgag 243 Query: 218 ctcacctttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttc 277 || || |||||| |||||||||||||||| ||||||||||| || | ||| |||| ||| Sbjct: 244 cttacttttgctccagtaattgaatggcttcctttttggtcctatgcaaagttgttcttc 303 Query: 278 aattgctggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtg 337 || |||||||||||||| || | ||| | ||||| || |||||||||| || |||||| Sbjct: 304 aactgctggttggtcttaccttgcttccatggtgctgcttatgtttatgatcactttgtg 363 Query: 338 cggccaatgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaa 396 ||||||||| ||||||| | ||| | ||||| |||||||| |||||| ||| ||||| Sbjct: 364 cggccaatgtttgtgaatcgtcaaatagtaaatgtctggtatgttccaagaaaagaaaa 422
>emb|CT830094.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA010G06, full insert sequence Length = 1022 Score = 268 bits (135), Expect = 3e-68 Identities = 303/359 (84%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 |||||||| ||||||||||||||| |||| | || |||| | || || ||||||||||| Sbjct: 107 atggggtctggatctttcctcaagctgctggccaacaacttcgacgtcctcgccgggcca 166 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 |||||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 167 ttagtttcacttgcttatccattatatgcctctgtgagagcaatagaaacaaaatctcct 226 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 227 gttgatgatcagcaatggctcacttactgggtgctgtactcgtttatcactttgtttgag 286 Query: 218 ctcacctttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttc 277 || || |||||| |||||||||||||||| ||||||||||| || | ||| |||| ||| Sbjct: 287 cttacttttgctccagtaattgaatggcttcctttttggtcctatgcaaagttgttcttc 346 Query: 278 aattgctggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtg 337 || |||||||||||||| || | ||| | ||||| || |||||||||| || |||||| Sbjct: 347 aactgctggttggtcttaccttgcttccatggtgctgcttatgtttatgatcactttgtg 406 Query: 338 cggccaatgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaa 396 ||||||||| ||||||| | ||| | ||||| |||||||| |||||| ||| ||||| Sbjct: 407 cggccaatgtttgtgaatcgtcaaatagtaaatgtctggtatgttccaagaaaagaaaa 465
>ref|NM_001063739.1| Oryza sativa (japonica cultivar-group) Os06g0226600 (Os06g0226600) mRNA, complete cds Length = 1083 Score = 268 bits (135), Expect = 3e-68 Identities = 303/359 (84%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 |||||||| ||||||||||||||| |||| | || |||| | || || ||||||||||| Sbjct: 170 atggggtctggatctttcctcaagctgctggccaacaacttcgacgtcctcgccgggcca 229 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 |||||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 230 ttagtttcacttgcttatccattatatgcctctgtgagagcaatagaaacaaaatctcct 289 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 290 gttgatgatcagcaatggctcacttactgggtgctgtactcgtttatcactttgtttgag 349 Query: 218 ctcacctttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttc 277 || || |||||| |||||||||||||||| ||||||||||| || | ||| |||| ||| Sbjct: 350 cttacttttgctccagtaattgaatggcttcctttttggtcctatgcaaagttgttcttc 409 Query: 278 aattgctggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtg 337 || |||||||||||||| || | ||| | ||||| || |||||||||| || |||||| Sbjct: 410 aactgctggttggtcttaccttgcttccatggtgctgcttatgtttatgatcactttgtg 469 Query: 338 cggccaatgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaa 396 ||||||||| ||||||| | ||| | ||||| |||||||| |||||| ||| ||||| Sbjct: 470 cggccaatgtttgtgaatcgtcaaatagtaaatgtctggtatgttccaagaaaagaaaa 528
>dbj|AK102752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106M05, full insert sequence Length = 1084 Score = 268 bits (135), Expect = 3e-68 Identities = 303/359 (84%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 |||||||| ||||||||||||||| |||| | || |||| | || || ||||||||||| Sbjct: 171 atggggtctggatctttcctcaagctgctggccaacaacttcgacgtcctcgccgggcca 230 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 |||||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 231 ttagtttcacttgcttatccattatatgcctctgtgagagcaatagaaacaaaatctcct 290 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 291 gttgatgatcagcaatggctcacttactgggtgctgtactcgtttatcactttgtttgag 350 Query: 218 ctcacctttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttc 277 || || |||||| |||||||||||||||| ||||||||||| || | ||| |||| ||| Sbjct: 351 cttacttttgctccagtaattgaatggcttcctttttggtcctatgcaaagttgttcttc 410 Query: 278 aattgctggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtg 337 || |||||||||||||| || | ||| | ||||| || |||||||||| || |||||| Sbjct: 411 aactgctggttggtcttaccttgcttccatggtgctgcttatgtttatgatcactttgtg 470 Query: 338 cggccaatgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaa 396 ||||||||| ||||||| | ||| | ||||| |||||||| |||||| ||| ||||| Sbjct: 471 cggccaatgtttgtgaatcgtcaaatagtaaatgtctggtatgttccaagaaaagaaaa 529
>dbj|AK061806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A03, full insert sequence Length = 1072 Score = 268 bits (135), Expect = 3e-68 Identities = 303/359 (84%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 |||||||| ||||||||||||||| |||| | || |||| | || || ||||||||||| Sbjct: 114 atggggtctggatctttcctcaagctgctggccaacaacttcgacgtcctcgccgggcca 173 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 |||||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 174 ttagtttcacttgcttatccattatatgcctctgtgagagcaatagaaacaaaatctcct 233 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 234 gttgatgatcagcaatggctcacttactgggtgctgtactcgtttatcactttgtttgag 293 Query: 218 ctcacctttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttc 277 || || |||||| |||||||||||||||| ||||||||||| || | ||| |||| ||| Sbjct: 294 cttacttttgctccagtaattgaatggcttcctttttggtcctatgcaaagttgttcttc 353 Query: 278 aattgctggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtg 337 || |||||||||||||| || | ||| | ||||| || |||||||||| || |||||| Sbjct: 354 aactgctggttggtcttaccttgcttccatggtgctgcttatgtttatgatcactttgtg 413 Query: 338 cggccaatgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaa 396 ||||||||| ||||||| | ||| | ||||| |||||||| |||||| ||| ||||| Sbjct: 414 cggccaatgtttgtgaatcgtcaaatagtaaatgtctggtatgttccaagaaaagaaaa 472
>gb|BT017605.1| Zea mays clone EL01N0432C07.c mRNA sequence Length = 1249 Score = 232 bits (117), Expect = 2e-57 Identities = 291/349 (83%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 ||||||||||||||||||||||||||||| | || ||| | ||||| || |||||||| Sbjct: 274 atggggtccggatctttcctcaaggtgctggccaataacttcgatgtccttgccgggcca 333 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 | | ||||| ||||||||||| ||||| |||||| |||| ||||| |||||| |||| Sbjct: 334 ctcatatcacttgcttatcctctatatgcttctgttagagctatagagacaaaaaatcct 393 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 394 gtagatgatcagcagtggctcacttactgggtgttgtactcgtttatcactttgtttgag 453 Query: 218 ctcacctttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttc 277 || || |||||| || | || || ||||| || |||||||| || | ||| ||||| || Sbjct: 454 ctaacttttgctccaattatcgagtggcttccattttggtcgtatgcaaagctgttcttt 513 Query: 278 aattgctggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtg 337 || ||||||||||||||||| | || || ||||| || ||||||| || ||||||||| Sbjct: 514 aactgctggttggtcttgccttggttcaatggtgctgcctatgtttacgaccattttgtg 573 Query: 338 cggccaatgattgtgaaccagcaagttgtaaacatctggtatattccaa 386 ||||||||| ||||||||| ||| | || ||||| ||||||||||||| Sbjct: 574 cggccaatgtttgtgaaccgccaaatagtgaacatatggtatattccaa 622
>gb|AY106282.1| Zea mays PCO142333 mRNA sequence Length = 802 Score = 232 bits (117), Expect = 2e-57 Identities = 354/433 (81%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 ||||||||||||||||||||||||||||| | || ||| | ||||| || |||||||| Sbjct: 226 atggggtccggatctttcctcaaggtgctggccaataacttcgatgtccttgccgggcca 285 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 | | ||||| ||||||||||| ||||| |||||| |||| ||||| |||||| |||| Sbjct: 286 ctcatatcacttgcttatcctctatatgcttctgttagagctatagagacaaaaaatcct 345 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct: 346 gtagatgatcagcagtggctcacttactgggtgttgtactcatttatcactttgtttgag 405 Query: 218 ctcacctttgctgcagtaattgaatggctccctttttggtcttacggaaaactgtttttc 277 || || |||||| || | || || ||||| || |||||||| || | ||| ||||| || Sbjct: 406 ctaacttttgctccaattatcgagtggcttccattttggtcgtatgcaaagctgttcttt 465 Query: 278 aattgctggttggtcttgccctactttaacggtgcagcgcatgtttatgagcattttgtg 337 || ||||||||||||||||| | || || ||||| || ||||||| || ||||||||| Sbjct: 466 aactgctggttggtcttgccttggttcaatggtgctgcctatgtttacgaccattttgtg 525 Query: 338 cggccaatgattgtgaaccagcaagttgtaaacatctggtatattccaaaaaaggaaaat 397 ||||||||| ||||||||| ||| | || ||||| ||||||||||||| ||| || || Sbjct: 526 cggccaatgtttgtgaaccgccaaatagtgaacatatggtatattccaagaaatgagaag 585 Query: 398 tcagataaacccgacgatgtaatttcagctgcacagaaatacattgaacaaaatggatct 457 || |||| | || ||||| | ||||||||| ||| ||| ||||||||||| ||| | Sbjct: 586 ctaggtaaatctgatgatgttctgtcagctgcagagagatatattgaacaaaacggacca 645 Query: 458 aaagcatttgaga 470 |||||||||||| Sbjct: 646 gaagcatttgaga 658
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 178 bits (90), Expect = 2e-41 Identities = 204/242 (84%) Strand = Plus / Plus Query: 243 ggctccctttttggtcttacggaaaactgtttttcaattgctggttggtcttgccctact 302 |||| ||||| |||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 31427251 ggcttcctttatggtcttatgctaaattgtttttcaattgctggttggtcttgccctact 31427310 Query: 303 ttaacggtgcagcgcatgtttatgagcattttgtgcggccaatgattgtgaaccagcaag 362 | || ||||| || ||||| ||||| || |||||| |||||||| |||| ||||||||| Sbjct: 31427311 tcaatggtgctgcacatgtctatgaacactttgtgaggccaatggttgtcaaccagcaaa 31427370 Query: 363 ttgtaaacatctggtatattccaaaaaaggaaaattcagataaacccgacgatgtaattt 422 | || || |||||||| || |||| |||||| | ||||||| |||||| ||||| || | Sbjct: 31427371 tagttaatatctggtacatcccaagaaaggatgagtcagatagacccgatgatgtgatat 31427430 Query: 423 cagctgcacagaaatacattgaacaaaatggatctaaagcatttgagactctcgttaaca 482 ||||||| |||| ||||||||||||||||||||| | ||| ||||| | ||| ||||||| Sbjct: 31427431 cagctgcgcagagatacattgaacaaaatggatcaagagcgtttgaaagtctggttaaca 31427490 Query: 483 ag 484 || Sbjct: 31427491 ag 31427492 Score = 149 bits (75), Expect = 2e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 122 tatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaatggctcact 181 ||||| ||||||||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 31426841 tatgcatctgttcgagcgatagaaacaaaatctgctgtagatgatcagcaatggctcaca 31426900 Query: 182 tactgggtgttgtactcgtttatcactctgttcgagctcacctttgctgcagtaattgaa 241 ||||||||||||||||||||||||||||| || |||||||| ||| || | ||| ||||| Sbjct: 31426901 tactgggtgttgtactcgtttatcactctatttgagctcactttttctccggtacttgaa 31426960 Query: 242 tgg 244 ||| Sbjct: 31426961 tgg 31426963 Score = 61.9 bits (31), Expect = 4e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 483 agtttaagactacaaacgcgaggcgctctattttggaggaggtagaggtggaaaggagag 542 |||||||| || ||||| | |||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 31427653 agtttaaggcttcaaacacaaggcgctccattctggaggaggtagaggctgaaagaagag 31427712 Query: 543 cgagggccgaacgagaactggaagctagggatgtgaatccattcttc 589 | | ||| |||| |||| ||||| ||||||| |||||| |||||| Sbjct: 31427713 ccaaggctgaactagaagcagaagcaagggatgagaatcctttcttc 31427759 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 tccggatctttcctcaaggtg 64 ||||||||||||||||||||| Sbjct: 31425839 tccggatctttcctcaaggtg 31425859
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 178 bits (90), Expect = 2e-41 Identities = 204/242 (84%) Strand = Plus / Plus Query: 243 ggctccctttttggtcttacggaaaactgtttttcaattgctggttggtcttgccctact 302 |||| ||||| |||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 109825 ggcttcctttatggtcttatgctaaattgtttttcaattgctggttggtcttgccctact 109884 Query: 303 ttaacggtgcagcgcatgtttatgagcattttgtgcggccaatgattgtgaaccagcaag 362 | || ||||| || ||||| ||||| || |||||| |||||||| |||| ||||||||| Sbjct: 109885 tcaatggtgctgcacatgtctatgaacactttgtgaggccaatggttgtcaaccagcaaa 109944 Query: 363 ttgtaaacatctggtatattccaaaaaaggaaaattcagataaacccgacgatgtaattt 422 | || || |||||||| || |||| |||||| | ||||||| |||||| ||||| || | Sbjct: 109945 tagttaatatctggtacatcccaagaaaggatgagtcagatagacccgatgatgtgatat 110004 Query: 423 cagctgcacagaaatacattgaacaaaatggatctaaagcatttgagactctcgttaaca 482 ||||||| |||| ||||||||||||||||||||| | ||| ||||| | ||| ||||||| Sbjct: 110005 cagctgcgcagagatacattgaacaaaatggatcaagagcgtttgaaagtctggttaaca 110064 Query: 483 ag 484 || Sbjct: 110065 ag 110066 Score = 149 bits (75), Expect = 2e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 122 tatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaatggctcact 181 ||||| ||||||||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 109415 tatgcatctgttcgagcgatagaaacaaaatctgctgtagatgatcagcaatggctcaca 109474 Query: 182 tactgggtgttgtactcgtttatcactctgttcgagctcacctttgctgcagtaattgaa 241 ||||||||||||||||||||||||||||| || |||||||| ||| || | ||| ||||| Sbjct: 109475 tactgggtgttgtactcgtttatcactctatttgagctcactttttctccggtacttgaa 109534 Query: 242 tgg 244 ||| Sbjct: 109535 tgg 109537 Score = 61.9 bits (31), Expect = 4e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 483 agtttaagactacaaacgcgaggcgctctattttggaggaggtagaggtggaaaggagag 542 |||||||| || ||||| | |||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 110227 agtttaaggcttcaaacacaaggcgctccattctggaggaggtagaggctgaaagaagag 110286 Query: 543 cgagggccgaacgagaactggaagctagggatgtgaatccattcttc 589 | | ||| |||| |||| ||||| ||||||| |||||| |||||| Sbjct: 110287 ccaaggctgaactagaagcagaagcaagggatgagaatcctttcttc 110333 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 tccggatctttcctcaaggtg 64 ||||||||||||||||||||| Sbjct: 108413 tccggatctttcctcaaggtg 108433
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 178 bits (90), Expect = 2e-41 Identities = 204/242 (84%) Strand = Plus / Plus Query: 243 ggctccctttttggtcttacggaaaactgtttttcaattgctggttggtcttgccctact 302 |||| ||||| |||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 62648 ggcttcctttatggtcttatgctaaattgtttttcaattgctggttggtcttgccctact 62707 Query: 303 ttaacggtgcagcgcatgtttatgagcattttgtgcggccaatgattgtgaaccagcaag 362 | || ||||| || ||||| ||||| || |||||| |||||||| |||| ||||||||| Sbjct: 62708 tcaatggtgctgcacatgtctatgaacactttgtgaggccaatggttgtcaaccagcaaa 62767 Query: 363 ttgtaaacatctggtatattccaaaaaaggaaaattcagataaacccgacgatgtaattt 422 | || || |||||||| || |||| |||||| | ||||||| |||||| ||||| || | Sbjct: 62768 tagttaatatctggtacatcccaagaaaggatgagtcagatagacccgatgatgtgatat 62827 Query: 423 cagctgcacagaaatacattgaacaaaatggatctaaagcatttgagactctcgttaaca 482 ||||||| |||| ||||||||||||||||||||| | ||| ||||| | ||| ||||||| Sbjct: 62828 cagctgcgcagagatacattgaacaaaatggatcaagagcgtttgaaagtctggttaaca 62887 Query: 483 ag 484 || Sbjct: 62888 ag 62889 Score = 149 bits (75), Expect = 2e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 122 tatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaatggctcact 181 ||||| ||||||||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 62238 tatgcatctgttcgagcgatagaaacaaaatctgctgtagatgatcagcaatggctcaca 62297 Query: 182 tactgggtgttgtactcgtttatcactctgttcgagctcacctttgctgcagtaattgaa 241 ||||||||||||||||||||||||||||| || |||||||| ||| || | ||| ||||| Sbjct: 62298 tactgggtgttgtactcgtttatcactctatttgagctcactttttctccggtacttgaa 62357 Query: 242 tgg 244 ||| Sbjct: 62358 tgg 62360 Score = 61.9 bits (31), Expect = 4e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 483 agtttaagactacaaacgcgaggcgctctattttggaggaggtagaggtggaaaggagag 542 |||||||| || ||||| | |||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 63050 agtttaaggcttcaaacacaaggcgctccattctggaggaggtagaggctgaaagaagag 63109 Query: 543 cgagggccgaacgagaactggaagctagggatgtgaatccattcttc 589 | | ||| |||| |||| ||||| ||||||| |||||| |||||| Sbjct: 63110 ccaaggctgaactagaagcagaagcaagggatgagaatcctttcttc 63156 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 tccggatctttcctcaaggtg 64 ||||||||||||||||||||| Sbjct: 61236 tccggatctttcctcaaggtg 61256
>gb|DQ244758.1| Zea mays clone 10524 mRNA sequence Length = 583 Score = 159 bits (80), Expect = 2e-35 Identities = 164/192 (85%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 ||||||||||||||||||||||||||||| | || ||| | ||||| || |||||||| Sbjct: 208 atggggtccggatctttcctcaaggtgctggccaagaacttcgatgtccttgccgggcca 267 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 | | ||||| ||||||||||| ||||| |||||| |||||||||| |||||| |||| Sbjct: 268 ctcatatcacttgcttatcctctatatgcttctgttagagcaatagagacaaaaaatcct 327 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 ||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||| ||| Sbjct: 328 gtagatgatcagcagtggctcacttactgggtgttgtactcatttgtcactttgtttgag 387 Query: 218 ctcacctttgct 229 || || |||||| Sbjct: 388 ctaacttttgct 399
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 157 bits (79), Expect = 8e-35 Identities = 112/123 (91%) Strand = Plus / Minus Query: 122 tatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaatggctcact 181 ||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 6572400 tatgcctctgtgagagcaatagaaacaaaatctcctgttgatgatcagcaatggctcact 6572341 Query: 182 tactgggtgttgtactcgtttatcactctgttcgagctcacctttgctgcagtaattgaa 241 ||||||||| ||||||||||||||||| |||| ||||| || |||||| ||||||||||| Sbjct: 6572340 tactgggtgctgtactcgtttatcactttgtttgagcttacttttgctccagtaattgaa 6572281 Query: 242 tgg 244 ||| Sbjct: 6572280 tgg 6572278 Score = 67.9 bits (34), Expect = 6e-08 Identities = 124/154 (80%) Strand = Plus / Minus Query: 243 ggctccctttttggtcttacggaaaactgtttttcaattgctggttggtcttgccctact 302 |||| ||||||||||| || | ||| |||| ||||| |||||||||||||| || | || Sbjct: 6571978 ggcttcctttttggtcctatgcaaagttgttcttcaactgctggttggtcttaccttgct 6571919 Query: 303 ttaacggtgcagcgcatgtttatgagcattttgtgcggccaatgattgtgaaccagcaag 362 | | ||||| || |||||||||| || ||||||||||||||| ||||||| | ||| Sbjct: 6571918 tccatggtgctgcttatgtttatgatcactttgtgcggccaatgtttgtgaatcgtcaaa 6571859 Query: 363 ttgtaaacatctggtatattccaaaaaaggaaaa 396 | ||||| |||||||| |||||| ||| ||||| Sbjct: 6571858 tagtaaatgtctggtatgttccaagaaaagaaaa 6571825 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 atggggtccggatctttcctcaaggtgct 66 |||||||| ||||||||||||||| |||| Sbjct: 6574009 atggggtctggatctttcctcaagctgct 6573981
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 157 bits (79), Expect = 8e-35 Identities = 112/123 (91%) Strand = Plus / Minus Query: 122 tatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaatggctcact 181 ||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 6526 tatgcctctgtgagagcaatagaaacaaaatctcctgttgatgatcagcaatggctcact 6467 Query: 182 tactgggtgttgtactcgtttatcactctgttcgagctcacctttgctgcagtaattgaa 241 ||||||||| ||||||||||||||||| |||| ||||| || |||||| ||||||||||| Sbjct: 6466 tactgggtgctgtactcgtttatcactttgtttgagcttacttttgctccagtaattgaa 6407 Query: 242 tgg 244 ||| Sbjct: 6406 tgg 6404 Score = 67.9 bits (34), Expect = 6e-08 Identities = 124/154 (80%) Strand = Plus / Minus Query: 243 ggctccctttttggtcttacggaaaactgtttttcaattgctggttggtcttgccctact 302 |||| ||||||||||| || | ||| |||| ||||| |||||||||||||| || | || Sbjct: 6104 ggcttcctttttggtcctatgcaaagttgttcttcaactgctggttggtcttaccttgct 6045 Query: 303 ttaacggtgcagcgcatgtttatgagcattttgtgcggccaatgattgtgaaccagcaag 362 | | ||||| || |||||||||| || ||||||||||||||| ||||||| | ||| Sbjct: 6044 tccatggtgctgcttatgtttatgatcactttgtgcggccaatgtttgtgaatcgtcaaa 5985 Query: 363 ttgtaaacatctggtatattccaaaaaaggaaaa 396 | ||||| |||||||| |||||| ||| ||||| Sbjct: 5984 tagtaaatgtctggtatgttccaagaaaagaaaa 5951 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 atggggtccggatctttcctcaaggtgct 66 |||||||| ||||||||||||||| |||| Sbjct: 8135 atggggtctggatctttcctcaagctgct 8107
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 157 bits (79), Expect = 8e-35 Identities = 112/123 (91%) Strand = Plus / Minus Query: 122 tatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaatggctcact 181 ||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 88776 tatgcctctgtgagagcaatagaaacaaaatctcctgttgatgatcagcaatggctcact 88717 Query: 182 tactgggtgttgtactcgtttatcactctgttcgagctcacctttgctgcagtaattgaa 241 ||||||||| ||||||||||||||||| |||| ||||| || |||||| ||||||||||| Sbjct: 88716 tactgggtgctgtactcgtttatcactttgtttgagcttacttttgctccagtaattgaa 88657 Query: 242 tgg 244 ||| Sbjct: 88656 tgg 88654 Score = 67.9 bits (34), Expect = 6e-08 Identities = 124/154 (80%) Strand = Plus / Minus Query: 243 ggctccctttttggtcttacggaaaactgtttttcaattgctggttggtcttgccctact 302 |||| ||||||||||| || | ||| |||| ||||| |||||||||||||| || | || Sbjct: 88354 ggcttcctttttggtcctatgcaaagttgttcttcaactgctggttggtcttaccttgct 88295 Query: 303 ttaacggtgcagcgcatgtttatgagcattttgtgcggccaatgattgtgaaccagcaag 362 | | ||||| || |||||||||| || ||||||||||||||| ||||||| | ||| Sbjct: 88294 tccatggtgctgcttatgtttatgatcactttgtgcggccaatgtttgtgaatcgtcaaa 88235 Query: 363 ttgtaaacatctggtatattccaaaaaaggaaaa 396 | ||||| |||||||| |||||| ||| ||||| Sbjct: 88234 tagtaaatgtctggtatgttccaagaaaagaaaa 88201 Score = 42.1 bits (21), Expect = 3.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 atggggtccggatctttcctcaaggtgct 66 |||||||| ||||||||||||||| |||| Sbjct: 90385 atggggtctggatctttcctcaagctgct 90357
>emb|CT830798.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA244C09, full insert sequence Length = 2302 Score = 93.7 bits (47), Expect = 1e-15 Identities = 155/191 (81%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 ||||||||||||||||| |||||||| || | || ||| | |||||||| || ||||| Sbjct: 247 atggggtccggatctttgctcaaggttcttgccaagaacttcgatgttcttgctgggcct 306 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 | ||| |||| |||||||| |||| || || ||| ||||||||||| ||||| ||| Sbjct: 307 ttggttgcactagcttatccgttgtacgcttcagttaaggcaatagaaaccaaatcccct 366 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||| ||||||||||| ||||||||| ||||||| || || || ||||| ||| Sbjct: 367 gtggatgatcaacaatggctcacatactgggtgatgtactcattaataacactgtttgag 426 Query: 218 ctcacctttgc 228 ||||| ||||| Sbjct: 427 ctcacatttgc 437
>ref|NM_001074762.1| Oryza sativa (japonica cultivar-group) Os11g0602300 (Os11g0602300) mRNA, complete cds Length = 1429 Score = 93.7 bits (47), Expect = 1e-15 Identities = 155/191 (81%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 ||||||||||||||||| |||||||| || | || ||| | |||||||| || ||||| Sbjct: 248 atggggtccggatctttgctcaaggttcttgccaagaacttcgatgttcttgctgggcct 307 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 | ||| |||| |||||||| |||| || || ||| ||||||||||| ||||| ||| Sbjct: 308 ttggttgcactagcttatccgttgtacgcttcagttaaggcaatagaaaccaaatcccct 367 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||| ||||||||||| ||||||||| ||||||| || || || ||||| ||| Sbjct: 368 gtggatgatcaacaatggctcacatactgggtgatgtactcattaataacactgtttgag 427 Query: 218 ctcacctttgc 228 ||||| ||||| Sbjct: 428 ctcacatttgc 438
>dbj|AK103473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130B07, full insert sequence Length = 1430 Score = 93.7 bits (47), Expect = 1e-15 Identities = 155/191 (81%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggtgctcgtcagcaacctggatgttctcgccgggccc 97 ||||||||||||||||| |||||||| || | || ||| | |||||||| || ||||| Sbjct: 249 atggggtccggatctttgctcaaggttcttgccaagaacttcgatgttcttgctgggcct 308 Query: 98 atagtttcactcgcttatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcct 157 | ||| |||| |||||||| |||| || || ||| ||||||||||| ||||| ||| Sbjct: 309 ttggttgcactagcttatccgttgtacgcttcagttaaggcaatagaaaccaaatcccct 368 Query: 158 atagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgag 217 | |||||||| ||||||||||| ||||||||| ||||||| || || || ||||| ||| Sbjct: 369 gtggatgatcaacaatggctcacatactgggtgatgtactcattaataacactgtttgag 428 Query: 218 ctcacctttgc 228 ||||| ||||| Sbjct: 429 ctcacatttgc 439
>gb|AY107684.1| Zea mays PCO095447 mRNA sequence Length = 627 Score = 87.7 bits (44), Expect = 6e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 413 gatgtaatttcagctgcacagaaatacattgaacaaaatggatctaaagcatttgagact 472 |||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||| | Sbjct: 15 gatgtaatttcagctgcacagaggtacattgagcaaaatggatcaaaagcgtttgagaat 74 Query: 473 ctcgttaacaag 484 || ||||||||| Sbjct: 75 cttgttaacaag 86
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 79.8 bits (40), Expect = 2e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 137 gcaatagaaacaaaatctcctatagatgatcagcaatggctcacttactgggtgttgtac 196 ||||||||||| ||||| ||| | |||||||| ||||||||||| ||||||||| ||||| Sbjct: 21414 gcaatagaaaccaaatcccctgtggatgatcaacaatggctcacatactgggtgatgtac 21355 Query: 197 tcgtttatcactctgttcgagctcacctttgc 228 || || || || ||||| |||||||| ||||| Sbjct: 21354 tcattaataacactgtttgagctcacatttgc 21323 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Minus Query: 38 atggggtccggatctttcctcaaggt 63 ||||||||||||||||| |||||||| Sbjct: 23143 atggggtccggatctttgctcaaggt 23118
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 79.8 bits (40), Expect = 2e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 137 gcaatagaaacaaaatctcctatagatgatcagcaatggctcacttactgggtgttgtac 196 ||||||||||| ||||| ||| | |||||||| ||||||||||| ||||||||| ||||| Sbjct: 132932 gcaatagaaaccaaatcccctgtggatgatcaacaatggctcacatactgggtgatgtac 132873 Query: 197 tcgtttatcactctgttcgagctcacctttgc 228 || || || || ||||| |||||||| ||||| Sbjct: 132872 tcattaataacactgtttgagctcacatttgc 132841 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Minus Query: 38 atggggtccggatctttcctcaaggt 63 ||||||||||||||||| |||||||| Sbjct: 134661 atggggtccggatctttgctcaaggt 134636
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 79.8 bits (40), Expect = 2e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 137 gcaatagaaacaaaatctcctatagatgatcagcaatggctcacttactgggtgttgtac 196 ||||||||||| ||||| ||| | |||||||| ||||||||||| ||||||||| ||||| Sbjct: 22319884 gcaatagaaaccaaatcccctgtggatgatcaacaatggctcacatactgggtgatgtac 22319943 Query: 197 tcgtttatcactctgttcgagctcacctttgc 228 || || || || ||||| |||||||| ||||| Sbjct: 22319944 tcattaataacactgtttgagctcacatttgc 22319975 Score = 44.1 bits (22), Expect = 0.87 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 atggggtccggatctttcctcaaggt 63 ||||||||||||||||| |||||||| Sbjct: 22318155 atggggtccggatctttgctcaaggt 22318180
>emb|CT986550.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 812 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 113 tatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaa 172 |||||||||||||| || || | ||||| || || ||||||||||||||||||||||| Sbjct: 100 tatcctctgtatgcttccgtcagggcaattgagactaaatctcctatagatgatcagcag 159 Query: 173 tggctcacttactgggtgttgtactcgtttatcactctgttcgagctcaccttt 226 ||||| || || ||||| | || || || ||||||| || |||||||||||| Sbjct: 160 tggcttacctattgggttctttattcccttctcactctctttgagctcaccttt 213
>emb|CT982087.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 813 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 113 tatcctctgtatgcgtctgttcgagcaatagaaacaaaatctcctatagatgatcagcaa 172 |||||||||||||| || || | ||||| || || ||||||||||||||||||||||| Sbjct: 100 tatcctctgtatgcttccgtcagggcaattgagactaaatctcctatagatgatcagcag 159 Query: 173 tggctcacttactgggtgttgtactcgtttatcactctgttcgagctcaccttt 226 ||||| || || ||||| | || || || ||||||| || |||||||||||| Sbjct: 160 tggcttacctattgggttctttattcccttctcactctctttgagctcaccttt 213
>gb|BT019011.1| Zea mays clone Contig503.F mRNA sequence Length = 1527 Score = 52.0 bits (26), Expect = 0.004 Identities = 53/62 (85%) Strand = Plus / Plus Query: 137 gcaatagaaacaaaatctcctatagatgatcagcaatggctcacttactgggtgttgtac 196 |||||||| || ||||||||| | |||||||| ||||||||||| || ||||| ||||| Sbjct: 358 gcaatagagaccaaatctcctgtggatgatcaacaatggctcacatattgggtcctgtac 417 Query: 197 tc 198 || Sbjct: 418 tc 419
>gb|AY105948.1| Zea mays PCO067819 mRNA sequence Length = 1115 Score = 52.0 bits (26), Expect = 0.004 Identities = 53/62 (85%) Strand = Plus / Plus Query: 137 gcaatagaaacaaaatctcctatagatgatcagcaatggctcacttactgggtgttgtac 196 |||||||| || ||||||||| | |||||||| ||||||||||| || ||||| ||||| Sbjct: 311 gcaatagagaccaaatctcctgtggatgatcaacaatggctcacatattgggtcctgtac 370 Query: 197 tc 198 || Sbjct: 371 tc 372
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.014 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 gatgatcagcaatggctcacttactgggt 189 |||||||||||||||||||| |||||||| Sbjct: 30358121 gatgatcagcaatggctcacctactgggt 30358093
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 50.1 bits (25), Expect = 0.014 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 gatgatcagcaatggctcacttactgggt 189 |||||||||||||||||||| |||||||| Sbjct: 146440 gatgatcagcaatggctcacctactgggt 146412
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 50.1 bits (25), Expect = 0.014 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 gatgatcagcaatggctcacttactgggt 189 |||||||||||||||||||| |||||||| Sbjct: 43848 gatgatcagcaatggctcacctactgggt 43820
>emb|AL442223.13| Human DNA sequence from clone RP11-426P2 on chromosome 1 Contains the 5' end of a variant of the DAB1 gene for disabled homolog 1 (Drosophila) and a CpG island, complete sequence Length = 54683 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 429 cacagaaatacattgaacaaaa 450 |||||||||||||||||||||| Sbjct: 11509 cacagaaatacattgaacaaaa 11530
>gb|AC016205.7| Homo sapiens, clone RP11-25C13, complete sequence Length = 167292 Score = 44.1 bits (22), Expect = 0.87 Identities = 22/22 (100%) Strand = Plus / Plus Query: 270 tgtttttcaattgctggttggt 291 |||||||||||||||||||||| Sbjct: 24796 tgtttttcaattgctggttggt 24817
>gb|AC115714.14| Mus musculus chromosome 12, clone RP23-477C24, complete sequence Length = 164272 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 tgtgaatccattcttccaccc 594 ||||||||||||||||||||| Sbjct: 100158 tgtgaatccattcttccaccc 100138
>gb|AY935269.1| Antirrhinum majus plena (PLE) gene, complete sequence Length = 85060 Score = 42.1 bits (21), Expect = 3.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 159 tagatgatcagcaatggctcacttactgggtgttgtactcgtttatcactctgttcgagc 218 |||| |||||||| ||||| || |||||||| | ||||||||||| || || ||||||| Sbjct: 53220 tagacgatcagcagtggctaacatactgggttatatactcgtttataacgctattcgagc 53279 Query: 219 t 219 | Sbjct: 53280 t 53280
>gb|BC103504.1| Homo sapiens cDNA clone IMAGE:40001827, with apparent retained intron Length = 3555 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 674 ttttagcttattactatattt 694 ||||||||||||||||||||| Sbjct: 2728 ttttagcttattactatattt 2708
>gb|AC022023.7| Homo sapiens chromosome 10 clone RP11-411P18, complete sequence Length = 160420 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 674 ttttagcttattactatattt 694 ||||||||||||||||||||| Sbjct: 114265 ttttagcttattactatattt 114245
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 agaaacaaaatctcctatagatgat 166 ||||||||||||||||||| ||||| Sbjct: 238906 agaaacaaaatctcctatatatgat 238930
>gb|AC108035.3| Homo sapiens BAC clone RP11-140P5 from 4, complete sequence Length = 137055 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 ctggtatattccaaaaaaggaaaat 397 |||||||||| |||||||||||||| Sbjct: 99391 ctggtatattacaaaaaaggaaaat 99415
>dbj|BS000096.1| Pan troglodytes chromosome 22 clone:PTB-103C09, map 22, complete sequences Length = 58243 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 agcaatagaaacaaaatctcctata 160 |||||||||||||||||||| |||| Sbjct: 39015 agcaatagaaacaaaatctcttata 38991
>emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in linkage group 20, complete sequence Length = 165014 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 804 gctgaacagttatgaaatgtt 824 ||||||||||||||||||||| Sbjct: 100624 gctgaacagttatgaaatgtt 100604
>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete sequence Length = 191270 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 catgtttatgagcattttgtg 337 ||||||||||||||||||||| Sbjct: 32457 catgtttatgagcattttgtg 32477
>dbj|AP001691.1| Homo sapiens genomic DNA, chromosome 21q, section 35/105 Length = 340000 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 agcaatagaaacaaaatctcctata 160 |||||||||||||||||||| |||| Sbjct: 23849 agcaatagaaacaaaatctcttata 23825
>gb|AC145914.4| Gallus gallus BAC clone CH261-78G10 from chromosome unknown, complete sequence Length = 228201 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 694 tagtcctgcattttgtatgat 714 ||||||||||||||||||||| Sbjct: 133772 tagtcctgcattttgtatgat 133752
>emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chromosome 10 Contains the ADRB1 gene for adrenergic beta-1- receptor, a ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1) pseudogene, the gene for CTCL tumor antigen L14-2 (FLJ10188 DKFZp762M1412 FLJ32946 FLJ37179 FLJ21086 FLJ32946 FLJ35301), the 5' end of the TDRD1 gene for tudor domain containing 1 and three CpG islands, complete sequence Length = 179009 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 674 ttttagcttattactatattt 694 ||||||||||||||||||||| Sbjct: 122310 ttttagcttattactatattt 122330
>gb|AC163609.4| Mus musculus chromosome 1, clone RP24-128P11, complete sequence Length = 164997 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 gcatgtttatgagcattttgt 336 ||||||||||||||||||||| Sbjct: 37767 gcatgtttatgagcattttgt 37747
>dbj|AP000964.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B838J12, LL56-APP region, complete sequence Length = 95595 Score = 42.1 bits (21), Expect = 3.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 agcaatagaaacaaaatctcctata 160 |||||||||||||||||||| |||| Sbjct: 20761 agcaatagaaacaaaatctcttata 20737 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 173,976,637 Number of extensions: 9382969 Number of successful extensions: 186937 Number of sequences better than 10.0: 47 Number of HSP's gapped: 186918 Number of HSP's successfully gapped: 67 Length of query: 913 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 890 Effective length of database: 18,503,978,556 Effective search space: 16468540914840 Effective search space used: 16468540914840 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
