| Clone Name | FLbaf34a16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243360.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100061I19, full insert sequence Length = 1554 Score = 256 bits (129), Expect = 2e-64 Identities = 192/213 (90%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 273 gaggaggtggtgatgcgcgtctacatgcactgcgagggctgcgccaggaaggtccggaag 332 Query: 357 atcctcaagagattcgatggagtagaggacgtcattgccgactctaaggcacacaaggtg 416 ||||||||| ||||||||||||| ||||| || || |||||||| ||||| ||||||||| Sbjct: 333 atcctcaagggattcgatggagtggaggatgtgatcgccgactcgaaggcgcacaaggtg 392 Query: 417 gttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgtgttcagaag 476 | |||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 393 ttggtgaaagggaagaaggcggctgcagacccgatgaaggtggtggagcgagttcagaag 452 Query: 477 aagacaggccgcaaggtggagctcctctcgccg 509 ||||| ||||| |||||||||||||| |||||| Sbjct: 453 aagaccggccggaaggtggagctcctgtcgccg 485 Score = 184 bits (93), Expect = 5e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || |||||||||||||||||||| || |||||||| || |||| || Sbjct: 570 ccggtgatcgcggttgtgctgaaggtgcacatgcattgtgaggcctgtgctcaggggatc 629 Query: 654 aagaagaggatcgaaaagatgaaaggagtgcaatctgcagagccagacctgaaggcctcg 713 | |||||||||| ||||||||||| || ||||| || ||||| ||||||||||| ||| Sbjct: 630 aggaagaggatcctcaagatgaaaggggtacaatcagctgagcctgacctgaaggcgtcg 689 Query: 714 gaagtgacggtgaagggcgtgtttgaggagaccaagctggctgagtacgtgcacaagcgc 773 || || || |||||||| |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 690 gaggtaaccgtgaagggtgtgtttgaggaggccaagctggccgagtacgtgcacaagcgc 749 Query: 774 accggcaagcatgcagccattatcaagtc 802 ||||||||||| || ||||| |||||||| Sbjct: 750 accggcaagcacgctgccatcatcaagtc 778 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 931 acccgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaaaaag 987 ||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 1168 acccgtcgcagatcttcagcgacgaaaacccgaatgcctgctctgtcatgtaaaaag 1224 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 849 gatgaaaagaaggcagcggaaggcggcgaggagaag 884 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 822 gatgagaagaaggcagccgaaggcggcgatgagaag 857 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1106 gcagcttgaagaaagtaccaggc 1128 ||||||||||||||||||||||| Sbjct: 1336 gcagcttgaagaaagtaccaggc 1358
>ref|NM_001059174.1| Oryza sativa (japonica cultivar-group) Os04g0390100 (Os04g0390100) mRNA, complete cds Length = 1158 Score = 256 bits (129), Expect = 2e-64 Identities = 192/213 (90%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 211 gaggaggtggtgatgcgcgtctacatgcactgcgagggctgcgccaggaaggtccggaag 270 Query: 357 atcctcaagagattcgatggagtagaggacgtcattgccgactctaaggcacacaaggtg 416 ||||||||| ||||||||||||| ||||| || || |||||||| ||||| ||||||||| Sbjct: 271 atcctcaagggattcgatggagtggaggatgtgatcgccgactcgaaggcgcacaaggtg 330 Query: 417 gttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgtgttcagaag 476 | |||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 331 ttggtgaaagggaagaaggcggctgcagacccgatgaaggtggtggagcgagttcagaag 390 Query: 477 aagacaggccgcaaggtggagctcctctcgccg 509 ||||| ||||| |||||||||||||| |||||| Sbjct: 391 aagaccggccggaaggtggagctcctgtcgccg 423 Score = 184 bits (93), Expect = 5e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || |||||||||||||||||||| || |||||||| || |||| || Sbjct: 508 ccggtgatcgcggttgtgctgaaggtgcacatgcattgtgaggcctgtgctcaggggatc 567 Query: 654 aagaagaggatcgaaaagatgaaaggagtgcaatctgcagagccagacctgaaggcctcg 713 | |||||||||| ||||||||||| || ||||| || ||||| ||||||||||| ||| Sbjct: 568 aggaagaggatcctcaagatgaaaggggtacaatcagctgagcctgacctgaaggcgtcg 627 Query: 714 gaagtgacggtgaagggcgtgtttgaggagaccaagctggctgagtacgtgcacaagcgc 773 || || || |||||||| |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 628 gaggtaaccgtgaagggtgtgtttgaggaggccaagctggccgagtacgtgcacaagcgc 687 Query: 774 accggcaagcatgcagccattatcaagtc 802 ||||||||||| || ||||| |||||||| Sbjct: 688 accggcaagcacgctgccatcatcaagtc 716 Score = 65.9 bits (33), Expect = 3e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 931 acccgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaa 983 ||||| ||||||||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 1106 acccgtcgcagatcttcagcgacgaaaacccgaatgcctgctctgtcatgtaa 1158 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 849 gatgaaaagaaggcagcggaaggcggcgaggagaag 884 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 760 gatgagaagaaggcagccgaaggcggcgatgagaag 795
>gb|BT018956.1| Zea mays clone Contig167.F mRNA sequence Length = 1302 Score = 196 bits (99), Expect = 1e-46 Identities = 195/227 (85%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||||| |||||||||||||||||||||||| || |||||| | ||||||||||| Sbjct: 168 gaggaggtcgagatgcgggtctacatgcactgcgaagggtgcgcccgcaaggtcaagaag 227 Query: 357 atcctcaagagattcgatggagtagaggacgtcattgccgactctaaggcacacaaggtg 416 ||||||| | | ||||| ||||| ||||| || || |||||||| ||||| ||||||||| Sbjct: 228 atcctcaggcgcttcgacggagtggaggatgtgatcgccgactccaaggcgcacaaggtg 287 Query: 417 gttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgtgttcagaag 476 | ||||| || ||||||||||| |||||||| ||||||||||| ||||| || |||||| Sbjct: 288 ctggtgaaggggaagaaggcggccgccgaccccatgaaggtggtggagcgcgtgcagaag 347 Query: 477 aagacaggccgcaaggtggagctcctctcgccgttaccgccgccgcc 523 ||||| ||||||||||| ||||| || |||||| | ||||| ||||| Sbjct: 348 aagaccggccgcaaggtcgagctgctgtcgccgatgccgcccccgcc 394 Score = 194 bits (98), Expect = 5e-46 Identities = 188/218 (86%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||| || Sbjct: 495 ccggtgatcgctgtggtgctgaaggtgcacatgcactgcgaggcgtgcgccgaggggatc 554 Query: 654 aagaagaggatcgaaaagatgaaaggagtgcaatctgcagagccagacctgaaggcctcg 713 |||||||||||| ||||||||||| ||||| || | ||| || ||||| ||||| ||| Sbjct: 555 aagaagaggatcctcaagatgaaaggcgtgcagtccgtagaaccggacctcaaggcgtcg 614 Query: 714 gaagtgacggtgaagggcgtgtttgaggagaccaagctggctgagtacgtgcacaagcgc 773 || |||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||| Sbjct: 615 gaggtgacggtgaagggcgtgttcgaggagtccaagctggcggagtacgtgtacaagcgc 674 Query: 774 accggcaagcatgcagccattatcaagtccgagccggc 811 || |||||||| || ||| | |||||||||||||||| Sbjct: 675 acgggcaagcacgcggccgtcgtcaagtccgagccggc 712 Score = 89.7 bits (45), Expect = 2e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1084 cgccgcagatcttcagcgacgagaaccccaacgcctgctccgtcatgta 1132
>gb|BT018531.1| Zea mays clone EL01N0434A08.d mRNA sequence Length = 1267 Score = 194 bits (98), Expect = 5e-46 Identities = 188/218 (86%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||| || Sbjct: 273 ccggtgatcgctgtggtgctgaaggtgcacatgcactgcgaggcgtgcgccgaggggatc 332 Query: 654 aagaagaggatcgaaaagatgaaaggagtgcaatctgcagagccagacctgaaggcctcg 713 |||||||||||| ||||||||||| ||||| || | ||| || ||||| ||||| ||| Sbjct: 333 aagaagaggatcctcaagatgaaaggcgtgcagtccgtagaaccggacctcaaggcgtcg 392 Query: 714 gaagtgacggtgaagggcgtgtttgaggagaccaagctggctgagtacgtgcacaagcgc 773 || |||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||| Sbjct: 393 gaggtgacggtgaagggcgtgttcgaggagtccaagctggcggagtacgtgtacaagcgc 452 Query: 774 accggcaagcatgcagccattatcaagtccgagccggc 811 || |||||||| || ||| | |||||||||||||||| Sbjct: 453 acgggcaagcacgcggccgtcgtcaagtccgagccggc 490 Score = 121 bits (61), Expect = 6e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 375 ggagtagaggacgtcattgccgactctaaggcacacaaggtggttgtgaaaggaaagaag 434 ||||| ||||| || || |||||||| ||||| ||||||||| | ||||| || |||||| Sbjct: 24 ggagtggaggatgtgatcgccgactccaaggcgcacaaggtgctggtgaaggggaagaag 83 Query: 435 gcggctgccgacccgatgaaggtggtcgagcgtgttcagaagaagacaggccgcaaggtg 494 ||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 84 gcggccgccgaccccatgaaggtggtggagcgcgtgcagaagaagaccggccgcaaggtc 143 Query: 495 gagctcctctcgccgttaccgccgccgcc 523 ||||| || |||||| | ||||| ||||| Sbjct: 144 gagctgctgtcgccgatgccgcccccgcc 172 Score = 89.7 bits (45), Expect = 2e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 862 cgccgcagatcttcagcgacgagaaccccaacgcctgctccgtcatgta 910
>gb|AY110604.1| Zea mays CL32636_1 mRNA sequence Length = 1024 Score = 180 bits (91), Expect = 8e-42 Identities = 166/191 (86%) Strand = Plus / Minus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||| || Sbjct: 982 ccggtgatcgctgtggtgctgaaggtgcacatgcactgcgaggcgtgcgccgaggggatc 923 Query: 654 aagaagaggatcgaaaagatgaaaggagtgcaatctgcagagccagacctgaaggcctcg 713 |||||||||||| ||||||||||| ||||| || | ||| || ||||| ||||| ||| Sbjct: 922 aagaagaggatcctcaagatgaaaggcgtgcagtccgtagaaccggacctcaaggcgtcg 863 Query: 714 gaagtgacggtgaagggcgtgtttgaggagaccaagctggctgagtacgtgcacaagcgc 773 || |||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||| Sbjct: 862 gaggtgacggtgaagggcgtgttcgaggagtccaagctggcggagtacgtgtacaagcgc 803 Query: 774 accggcaagca 784 || |||||||| Sbjct: 802 acgggcaagca 792 Score = 89.7 bits (45), Expect = 2e-14 Identities = 48/49 (97%) Strand = Plus / Minus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 393 cgccgcagatcttcagcgacgagaaccccaacgcctgctccgtcatgta 345
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 149 bits (75), Expect = 3e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 375 ggagtagaggacgtcattgccgactctaaggcacacaaggtggttgtgaaaggaaagaag 434 ||||| ||||| || || |||||||| ||||| ||||||||| | |||||||| |||||| Sbjct: 19201330 ggagtggaggatgtgatcgccgactcgaaggcgcacaaggtgttggtgaaagggaagaag 19201389 Query: 435 gcggctgccgacccgatgaaggtggtcgagcgtgttcagaagaagacaggccgcaaggtg 494 |||||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 19201390 gcggctgcagacccgatgaaggtggtggagcgagttcagaagaagaccggccggaaggtg 19201449 Query: 495 gagctcctctcgccg 509 |||||||| |||||| Sbjct: 19201450 gagctcctgtcgccg 19201464 Score = 133 bits (67), Expect = 2e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 684 caatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtttgaggag 743 ||||| || ||||| ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 19202282 caatcagctgagcctgacctgaaggcgtcggaggtaaccgtgaagggtgtgtttgaggag 19202341 Query: 744 accaagctggctgagtacgtgcacaagcgcaccggcaagcatgcagccattatcaagtc 802 |||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 19202342 gccaagctggccgagtacgtgcacaagcgcaccggcaagcacgctgccatcatcaagtc 19202400 Score = 111 bits (56), Expect = 6e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 19200359 gaggaggtggtgatgcgcgtctacatgcactgcgagggctgcgccaggaaggtccggaag 19200418 Query: 357 atcctcaagagattcgatgg 376 ||||||||| |||||||||| Sbjct: 19200419 atcctcaagggattcgatgg 19200438 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 931 acccgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaaaaag 987 ||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 19202790 acccgtcgcagatcttcagcgacgaaaacccgaatgcctgctctgtcatgtaaaaag 19202846 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| |||||||||||||||||||| Sbjct: 9420174 cttcagcgacgagaaccccaacgcctgctccgtcatgta 9420136 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || |||||||||||||||||||| || |||||||| || |||| || Sbjct: 19201708 ccggtgatcgcggttgtgctgaaggtgcacatgcattgtgaggcctgtgctcaggggatc 19201767 Query: 654 aagaagaggatcgaaaagatgaaagg 679 | |||||||||| ||||||||||| Sbjct: 19201768 aggaagaggatcctcaagatgaaagg 19201793 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 849 gatgaaaagaaggcagcggaaggcggcgaggagaag 884 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 19202444 gatgagaagaaggcagccgaaggcggcgatgagaag 19202479 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1106 gcagcttgaagaaagtaccaggc 1128 ||||||||||||||||||||||| Sbjct: 19202958 gcagcttgaagaaagtaccaggc 19202980
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 149 bits (75), Expect = 3e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 375 ggagtagaggacgtcattgccgactctaaggcacacaaggtggttgtgaaaggaaagaag 434 ||||| ||||| || || |||||||| ||||| ||||||||| | |||||||| |||||| Sbjct: 134852 ggagtggaggatgtgatcgccgactcgaaggcgcacaaggtgttggtgaaagggaagaag 134911 Query: 435 gcggctgccgacccgatgaaggtggtcgagcgtgttcagaagaagacaggccgcaaggtg 494 |||||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 134912 gcggctgcagacccgatgaaggtggtggagcgagttcagaagaagaccggccggaaggtg 134971 Query: 495 gagctcctctcgccg 509 |||||||| |||||| Sbjct: 134972 gagctcctgtcgccg 134986 Score = 133 bits (67), Expect = 2e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 684 caatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtttgaggag 743 ||||| || ||||| ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 135804 caatcagctgagcctgacctgaaggcgtcggaggtaaccgtgaagggtgtgtttgaggag 135863 Query: 744 accaagctggctgagtacgtgcacaagcgcaccggcaagcatgcagccattatcaagtc 802 |||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 135864 gccaagctggccgagtacgtgcacaagcgcaccggcaagcacgctgccatcatcaagtc 135922 Score = 111 bits (56), Expect = 6e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 133881 gaggaggtggtgatgcgcgtctacatgcactgcgagggctgcgccaggaaggtccggaag 133940 Query: 357 atcctcaagagattcgatgg 376 ||||||||| |||||||||| Sbjct: 133941 atcctcaagggattcgatgg 133960 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 931 acccgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaaaaag 987 ||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 136312 acccgtcgcagatcttcagcgacgaaaacccgaatgcctgctctgtcatgtaaaaag 136368 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || |||||||||||||||||||| || |||||||| || |||| || Sbjct: 135230 ccggtgatcgcggttgtgctgaaggtgcacatgcattgtgaggcctgtgctcaggggatc 135289 Query: 654 aagaagaggatcgaaaagatgaaagg 679 | |||||||||| ||||||||||| Sbjct: 135290 aggaagaggatcctcaagatgaaagg 135315 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 849 gatgaaaagaaggcagcggaaggcggcgaggagaag 884 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 135966 gatgagaagaaggcagccgaaggcggcgatgagaag 136001 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1106 gcagcttgaagaaagtaccaggc 1128 ||||||||||||||||||||||| Sbjct: 136480 gcagcttgaagaaagtaccaggc 136502
>gb|BT024052.1| Zea mays clone EL01N0437G11 mRNA sequence Length = 1768 Score = 147 bits (74), Expect = 1e-31 Identities = 116/130 (89%) Strand = Plus / Plus Query: 681 gtgcaatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtttgag 740 ||||||||||||||||||||||| ||||| ||||| ||| | |||||||||||||| ||| Sbjct: 759 gtgcaatctgcagagccagacctcaaggcgtcggaggtggcagtgaagggcgtgttcgag 818 Query: 741 gagaccaagctggctgagtacgtgcacaagcgcaccggcaagcatgcagccattatcaag 800 ||| |||||||||| ||||||||| ||||||||||||||||||| || ||| | ||||| Sbjct: 819 gagtccaagctggcggagtacgtgtacaagcgcaccggcaagcacgcggccgtcgtcaag 878 Query: 801 tccgagccgg 810 |||||||||| Sbjct: 879 tccgagccgg 888 Score = 127 bits (64), Expect = 1e-25 Identities = 149/176 (84%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 345 aaggtcaagaaaatcctcaagagattcgatggagtagaggacgtcattgccgactctaag 404 ||||||||||| ||||||||| | ||||| ||||| |||||||| | |||||||| ||| Sbjct: 16 aaggtcaagaagatcctcaagcgcttcgaaggagtggaggacgtggtcgccgactccaag 75 Query: 405 gcacacaaggtggttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgag 464 | |||||||||| ||||| || ||||||||||| |||||||| |||| |||||| ||| Sbjct: 76 tcg-acaaggtggtggtgaaggggaagaaggcggccgccgaccccatgagggtggtggag 134 Query: 465 cgtgttcagaagaagacaggccgcaaggtggagctcctctcgccgttaccgccgcc 520 || || ||||||||||| ||||||||||||||||| | |||||| | |||||||| Sbjct: 135 cgcgtgcagaagaagaccggccgcaaggtggagctggtgtcgccgatcccgccgcc 190 Score = 91.7 bits (46), Expect = 6e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaa 983 |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1273 cgccgcagatcttcagcgacgagaaccccaacgcctgctccgtcatgtaa 1322 Score = 83.8 bits (42), Expect = 1e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || ||||||||||||||||||||||||||||||||||| |||| || Sbjct: 264 ccggtgatcgccgtggtgctgaaggtgcacatgcactgcgaggcctgcgcccaggggatc 323 Query: 654 aagaagaggatcgaaaagatgaaagg 679 | |||||||||| ||||||||||| Sbjct: 324 aggaagaggatcctcaagatgaaagg 349
>gb|BT024032.1| Zea mays clone EL01N0422H11 mRNA sequence Length = 1804 Score = 147 bits (74), Expect = 1e-31 Identities = 116/130 (89%) Strand = Plus / Plus Query: 681 gtgcaatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtttgag 740 ||||||||||||||||||||||| ||||| ||||| ||| | |||||||||||||| ||| Sbjct: 798 gtgcaatctgcagagccagacctcaaggcgtcggaggtggcagtgaagggcgtgttcgag 857 Query: 741 gagaccaagctggctgagtacgtgcacaagcgcaccggcaagcatgcagccattatcaag 800 ||| |||||||||| ||||||||| ||||||||||||||||||| || ||| | ||||| Sbjct: 858 gagtccaagctggcggagtacgtgtacaagcgcaccggcaagcacgcggccgtcgtcaag 917 Query: 801 tccgagccgg 810 |||||||||| Sbjct: 918 tccgagccgg 927 Score = 111 bits (56), Expect = 6e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 409 acaaggtggttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgtg 468 |||||||||| ||||| || ||||||||||| |||||||| |||| |||||| ||||| | Sbjct: 9 acaaggtggtggtgaaggggaagaaggcggccgccgaccccatgagggtggtggagcgcg 68 Query: 469 ttcagaagaagacaggccgcaaggtggagctcctctcgccgttaccgccgcc 520 | ||||||||||| ||||||||||||||||| || |||||| | |||||||| Sbjct: 69 tgcagaagaagaccggccgcaaggtggagctgctgtcgccgatcccgccgcc 120 Score = 91.7 bits (46), Expect = 6e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaa 983 |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1312 cgccgcagatcttcagcgacgagaaccccaacgcctgctccgtcatgtaa 1361 Score = 83.8 bits (42), Expect = 1e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || ||||||||||||||||||||||||||||||||||| |||| || Sbjct: 303 ccggtgatcgccgtggtgctgaaggtgcacatgcactgcgaggcctgcgcccaggggatc 362 Query: 654 aagaagaggatcgaaaagatgaaagg 679 | |||||||||| ||||||||||| Sbjct: 363 aggaagaggatcctcaagatgaaagg 388
>emb|CR855100.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0132D06, complete sequence Length = 98092 Score = 141 bits (71), Expect = 7e-30 Identities = 119/135 (88%) Strand = Plus / Plus Query: 375 ggagtagaggacgtcattgccgactctaaggcacacaaggtggttgtgaaaggaaagaag 434 ||||| ||||| || || |||||||| ||| | ||||||||| | |||||||| |||||| Sbjct: 13452 ggagtggaggatgtgatcgccgactcgaagtcgcacaaggtgttggtgaaagggaagaag 13511 Query: 435 gcggctgccgacccgatgaaggtggtcgagcgtgttcagaagaagacaggccgcaaggtg 494 || ||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 13512 gcagctgcagacccgatgaaggtggtggagcgagttcagaagaagaccggccggaaggtg 13571 Query: 495 gagctcctctcgccg 509 ||||||||||||||| Sbjct: 13572 gagctcctctcgccg 13586 Score = 133 bits (67), Expect = 2e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 684 caatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtttgaggag 743 ||||| || ||||| ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 14404 caatcagctgagcctgacctgaaggcgtcggaggtaaccgtgaagggtgtgtttgaggag 14463 Query: 744 accaagctggctgagtacgtgcacaagcgcaccggcaagcatgcagccattatcaagtc 802 |||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 14464 gccaagctggccgagtacgtgcacaagcgcaccggcaagcacgctgccatcatcaagtc 14522 Score = 111 bits (56), Expect = 6e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 12484 gaggaggtggtgatgcgcgtctacatgcactgcgagggctgcgccaggaaggtccggaag 12543 Query: 357 atcctcaagagattcgatgg 376 ||||||||| |||||||||| Sbjct: 12544 atcctcaagggattcgatgg 12563 Score = 85.7 bits (43), Expect = 3e-13 Identities = 79/90 (87%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 931 acccgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaaaaaggag 990 ||||| ||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 14900 acccgtcgcagatcttcagcgacgaaaacccgaatgcctgctccgtcatgtaaaaag--t 14957 Query: 991 gttagaaccttggtggtctagagtggaaaa 1020 ||||||||| || ||||||||||| |||| Sbjct: 14958 tttagaacctggggggtctagagtgaaaaa 14987 Score = 67.9 bits (34), Expect = 8e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || |||||||||||||||||||| || |||||||| || |||| || Sbjct: 13830 ccggtgatcgcggttgtgctgaaggtgcacatgcattgtgaggcctgtgctcaggggatc 13889 Query: 654 aagaagaggatcgaaaagatgaaagg 679 |||||||||||| ||||||||||| Sbjct: 13890 aagaagaggatcctcaagatgaaagg 13915 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 849 gatgaaaagaaggcagcggaaggcggcgaggagaag 884 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 14566 gatgagaagaaggcagccgaaggcggcgatgagaag 14601 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1106 gcagcttgaagaaagtaccaggc 1128 ||||||||||||||||||||||| Sbjct: 15068 gcagcttgaagaaagtaccaggc 15090
>emb|CR855099.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0096P03, complete sequence Length = 88065 Score = 141 bits (71), Expect = 7e-30 Identities = 119/135 (88%) Strand = Plus / Plus Query: 375 ggagtagaggacgtcattgccgactctaaggcacacaaggtggttgtgaaaggaaagaag 434 ||||| ||||| || || |||||||| ||| | ||||||||| | |||||||| |||||| Sbjct: 70105 ggagtggaggatgtgatcgccgactcgaagtcgcacaaggtgttggtgaaagggaagaag 70164 Query: 435 gcggctgccgacccgatgaaggtggtcgagcgtgttcagaagaagacaggccgcaaggtg 494 || ||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 70165 gcagctgcagacccgatgaaggtggtggagcgagttcagaagaagaccggccggaaggtg 70224 Query: 495 gagctcctctcgccg 509 ||||||||||||||| Sbjct: 70225 gagctcctctcgccg 70239 Score = 133 bits (67), Expect = 2e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 684 caatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtttgaggag 743 ||||| || ||||| ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 71057 caatcagctgagcctgacctgaaggcgtcggaggtaaccgtgaagggtgtgtttgaggag 71116 Query: 744 accaagctggctgagtacgtgcacaagcgcaccggcaagcatgcagccattatcaagtc 802 |||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 71117 gccaagctggccgagtacgtgcacaagcgcaccggcaagcacgctgccatcatcaagtc 71175 Score = 111 bits (56), Expect = 6e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 69137 gaggaggtggtgatgcgcgtctacatgcactgcgagggctgcgccaggaaggtccggaag 69196 Query: 357 atcctcaagagattcgatgg 376 ||||||||| |||||||||| Sbjct: 69197 atcctcaagggattcgatgg 69216 Score = 85.7 bits (43), Expect = 3e-13 Identities = 79/90 (87%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 931 acccgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaaaaaggag 990 ||||| ||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 71553 acccgtcgcagatcttcagcgacgaaaacccgaatgcctgctccgtcatgtaaaaag--t 71610 Query: 991 gttagaaccttggtggtctagagtggaaaa 1020 ||||||||| || ||||||||||| |||| Sbjct: 71611 tttagaacctggggggtctagagtgaaaaa 71640 Score = 67.9 bits (34), Expect = 8e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 594 ccggtgatctctgtagtgctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcata 653 ||||||||| | || |||||||||||||||||||| || |||||||| || |||| || Sbjct: 70483 ccggtgatcgcggttgtgctgaaggtgcacatgcattgtgaggcctgtgctcaggggatc 70542 Query: 654 aagaagaggatcgaaaagatgaaagg 679 |||||||||||| ||||||||||| Sbjct: 70543 aagaagaggatcctcaagatgaaagg 70568 Score = 48.1 bits (24), Expect = 0.076 Identities = 33/36 (91%) Strand = Plus / Plus Query: 849 gatgaaaagaaggcagcggaaggcggcgaggagaag 884 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 71219 gatgagaagaaggcagccgaaggcggcgatgagaag 71254 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1106 gcagcttgaagaaagtaccaggc 1128 ||||||||||||||||||||||| Sbjct: 71721 gcagcttgaagaaagtaccaggc 71743
>ref|NM_001053469.1| Oryza sativa (japonica cultivar-group) Os02g0510600 (Os02g0510600) mRNA, complete cds Length = 1470 Score = 141 bits (71), Expect = 7e-30 Identities = 170/203 (83%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| ||||||||||||| |||||||||||| || ||||| | ||||||||||| Sbjct: 291 gaggaggtggtgatgcgggtcttcatgcactgcgaagggtgcgctcgcaaggtcaagaag 350 Query: 357 atcctcaagagattcgatggagtagaggacgtcattgccgactctaaggcacacaaggtg 416 || |||| | |||| |||||||| || || || | || ||||| || || ||||||||| Sbjct: 351 atactcaggggatttgatggagtggaagatgttgtcgcggactcgaaagctcacaaggtg 410 Query: 417 gttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgtgttcagaag 476 | ||||| ||||||||||| ||||| ||||| ||||||||||| | ||||| |||||| Sbjct: 411 atcgtgaagggaaagaaggctgctgctgacccaatgaaggtggtgcaccgtgtgcagaag 470 Query: 477 aagacaggccgcaaggtggagct 499 ||||||||||||||||| ||||| Sbjct: 471 aagacaggccgcaaggttgagct 493 Score = 111 bits (56), Expect = 6e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 612 ctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcataaagaagaggatcgaaaag 671 ||||||||||| ||||| || |||||||| ||||| || || | ||||| ||| ||| Sbjct: 603 ctgaaggtgcatatgcattgtgaggcctgtgcgcaagttatcaggaagaaaatcctcaag 662 Query: 672 atgaaaggagtgcaatctgcagagccagacctgaaggcctcggaagtgacggtgaagggc 731 ||||||||||||||||| |||||||||||| ||||||| || |||||||||||||||| Sbjct: 663 atgaaaggagtgcaatcagcagagccagacatgaaggcatcacaagtgacggtgaagggt 722 Query: 732 gtgtttgaggag 743 |||||||||||| Sbjct: 723 gtgtttgaggag 734 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 846 aaggatgaaaagaaggcagcggaaggcggcgaggagaagga 886 |||||||| |||||||| || ||||| |||||||||||||| Sbjct: 837 aaggatgacaagaaggcggccgaaggtggcgaggagaagga 877 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctg 970 |||||||| ||||||| |||||||| ||||||||||| Sbjct: 1078 cgccgcagctcttcagtgacgagaatccaaacgcctg 1114
>dbj|AK073949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073M20, full insert sequence Length = 1468 Score = 141 bits (71), Expect = 7e-30 Identities = 170/203 (83%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| ||||||||||||| |||||||||||| || ||||| | ||||||||||| Sbjct: 288 gaggaggtggtgatgcgggtcttcatgcactgcgaagggtgcgctcgcaaggtcaagaag 347 Query: 357 atcctcaagagattcgatggagtagaggacgtcattgccgactctaaggcacacaaggtg 416 || |||| | |||| |||||||| || || || | || ||||| || || ||||||||| Sbjct: 348 atactcaggggatttgatggagtggaagatgttgtcgcggactcgaaagctcacaaggtg 407 Query: 417 gttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgtgttcagaag 476 | ||||| ||||||||||| ||||| ||||| ||||||||||| | ||||| |||||| Sbjct: 408 atcgtgaagggaaagaaggctgctgctgacccaatgaaggtggtgcaccgtgtgcagaag 467 Query: 477 aagacaggccgcaaggtggagct 499 ||||||||||||||||| ||||| Sbjct: 468 aagacaggccgcaaggttgagct 490 Score = 111 bits (56), Expect = 6e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 612 ctgaaggtgcacatgcactgcgaggcctgcgcgcaggtcataaagaagaggatcgaaaag 671 ||||||||||| ||||| || |||||||| ||||| || || | ||||| ||| ||| Sbjct: 600 ctgaaggtgcatatgcattgtgaggcctgtgcgcaagttatcaggaagaaaatcctcaag 659 Query: 672 atgaaaggagtgcaatctgcagagccagacctgaaggcctcggaagtgacggtgaagggc 731 ||||||||||||||||| |||||||||||| ||||||| || |||||||||||||||| Sbjct: 660 atgaaaggagtgcaatcagcagagccagacatgaaggcatcacaagtgacggtgaagggt 719 Query: 732 gtgtttgaggag 743 |||||||||||| Sbjct: 720 gtgtttgaggag 731 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 846 aaggatgaaaagaaggcagcggaaggcggcgaggagaagga 886 |||||||| |||||||| || ||||| |||||||||||||| Sbjct: 834 aaggatgacaagaaggcggccgaaggtggcgaggagaagga 874 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctg 970 |||||||| ||||||| |||||||| ||||||||||| Sbjct: 1075 cgccgcagctcttcagtgacgagaatccaaacgcctg 1111
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 95.6 bits (48), Expect = 4e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 408 cacaaggtggttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgt 467 ||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||| | ||| Sbjct: 18353849 cacaaggtgatcgtgaagggaaagaaggctgctgctgacccaatgaaggtggtgcaccgt 18353908 Query: 468 gttcagaagaagacaggccgcaaggtggagct 499 || ||||||||||||||||||||||| ||||| Sbjct: 18353909 gtgcagaagaagacaggccgcaaggttgagct 18353940 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 677 aggagtgcaatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtt 736 |||||||||||| |||||||||||| ||||||| || |||||||||||||||| ||||| Sbjct: 18355015 aggagtgcaatcagcagagccagacatgaaggcatcacaagtgacggtgaagggtgtgtt 18355074 Query: 737 tgaggag 743 ||||||| Sbjct: 18355075 tgaggag 18355081 Score = 63.9 bits (32), Expect = 1e-06 Identities = 68/80 (85%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| ||||||||||||| |||||||||||| || ||||| | ||||||||||| Sbjct: 18352763 gaggaggtggtgatgcgggtcttcatgcactgcgaagggtgcgctcgcaaggtcaagaag 18352822 Query: 357 atcctcaagagattcgatgg 376 || |||| | |||| ||||| Sbjct: 18352823 atactcaggggatttgatgg 18352842 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 846 aaggatgaaaagaaggcagcggaaggcggcgaggagaagga 886 |||||||| |||||||| || ||||| |||||||||||||| Sbjct: 18355184 aaggatgacaagaaggcggccgaaggtggcgaggagaagga 18355224 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctg 970 |||||||| ||||||| |||||||| ||||||||||| Sbjct: 18355425 cgccgcagctcttcagtgacgagaatccaaacgcctg 18355461 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 942 atcttcagcgacgagaacccaaacgcctgc 971 ||||||||||| |||||||| ||||||||| Sbjct: 29500000 atcttcagcgaggagaaccccaacgcctgc 29499971 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 946 tcagcgacgagaacccaaacgcctgctcc 974 |||||||||||||||| || ||||||||| Sbjct: 35153544 tcagcgacgagaaccccaatgcctgctcc 35153572
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 95.6 bits (48), Expect = 4e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 408 cacaaggtggttgtgaaaggaaagaaggcggctgccgacccgatgaaggtggtcgagcgt 467 ||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||| | ||| Sbjct: 16773 cacaaggtgatcgtgaagggaaagaaggctgctgctgacccaatgaaggtggtgcaccgt 16832 Query: 468 gttcagaagaagacaggccgcaaggtggagct 499 || ||||||||||||||||||||||| ||||| Sbjct: 16833 gtgcagaagaagacaggccgcaaggttgagct 16864 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 677 aggagtgcaatctgcagagccagacctgaaggcctcggaagtgacggtgaagggcgtgtt 736 |||||||||||| |||||||||||| ||||||| || |||||||||||||||| ||||| Sbjct: 17939 aggagtgcaatcagcagagccagacatgaaggcatcacaagtgacggtgaagggtgtgtt 17998 Query: 737 tgaggag 743 ||||||| Sbjct: 17999 tgaggag 18005 Score = 63.9 bits (32), Expect = 1e-06 Identities = 68/80 (85%) Strand = Plus / Plus Query: 297 gaggaggtcgtgatgcgggtctacatgcactgcgagggctgcgccaggaaggtcaagaaa 356 |||||||| ||||||||||||| |||||||||||| || ||||| | ||||||||||| Sbjct: 15687 gaggaggtggtgatgcgggtcttcatgcactgcgaagggtgcgctcgcaaggtcaagaag 15746 Query: 357 atcctcaagagattcgatgg 376 || |||| | |||| ||||| Sbjct: 15747 atactcaggggatttgatgg 15766 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 846 aaggatgaaaagaaggcagcggaaggcggcgaggagaagga 886 |||||||| |||||||| || ||||| |||||||||||||| Sbjct: 18108 aaggatgacaagaaggcggccgaaggtggcgaggagaagga 18148 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctg 970 |||||||| ||||||| |||||||| ||||||||||| Sbjct: 18349 cgccgcagctcttcagtgacgagaatccaaacgcctg 18385
>gb|BT016842.1| Zea mays clone Contig675 mRNA sequence Length = 707 Score = 91.7 bits (46), Expect = 6e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaa 983 |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 514 cgccgcagatcttcagcgacgagaaccccaacgcctgctccgtcatgtaa 465
>gb|BT017885.1| Zea mays clone EL01N0514G02.c mRNA sequence Length = 870 Score = 89.7 bits (45), Expect = 2e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 935 gccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaa 983 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 381 gccgcagatcttcagcgacgagaaccccaacgcctgctccgtcatgtaa 429
>gb|AY108072.1| Zea mays PCO123189 mRNA sequence Length = 398 Score = 83.8 bits (42), Expect = 1e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctccgtcatgtaa 983 |||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 297 cgccgcagatcttcagcgacgagaaccccaacgcatgctccgtcatgtaa 346
>gb|AY104456.1| Zea mays PCO066778 mRNA sequence Length = 804 Score = 83.8 bits (42), Expect = 1e-12 Identities = 117/142 (82%) Strand = Plus / Plus Query: 669 aagatgaaaggagtgcaatctgcagagccagacctgaaggcctcggaagtgacggtgaag 728 ||||||||||| |||||||||| |||| ||||||| ||||| || |||| || |||||| Sbjct: 44 aagatgaaaggcgtgcaatctgtagaggcagacctcaaggcttctcaagtcactgtgaag 103 Query: 729 ggcgtgtttgaggagaccaagctggctgagtacgtgcacaagcgcaccggcaagcatgca 788 || ||||| |||||| |||||||| |||| || ||| | | |||||| |||||||| || Sbjct: 104 ggtgtgttcgaggaggccaagctgtctgattatgtgtataggcgcactggcaagcacgct 163 Query: 789 gccattatcaagtccgagccgg 810 || || ||||||| ||||||| Sbjct: 164 gctatcgtcaagtctgagccgg 185 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 843 gccaaggatgaaaagaaggcagcggaaggcggcgaggagaag 884 ||||||||||| ||||||||||| ||||| || ||||||||| Sbjct: 215 gccaaggatgacaagaaggcagccgaaggtggggaggagaag 256 Score = 42.1 bits (21), Expect = 4.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 930 tacccgccgcagatcttcagcgacgagaacccaaacgcctg 970 ||||| || ||| ||||||||||||||||||| || ||||| Sbjct: 431 taccctcctcagctcttcagcgacgagaacccgaatgcctg 471
>gb|DQ246098.1| Zea mays clone 16728 mRNA sequence Length = 888 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| |||||||||||||||||||| Sbjct: 577 cttcagcgacgagaaccccaacgcctgctccgtcatgta 615
>emb|CR855232.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0211F06-OSIGBa0153M17, complete sequence Length = 185173 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| |||||||||||||||||||| Sbjct: 51664 cttcagcgacgagaaccccaacgcctgctccgtcatgta 51626
>ref|NM_001058839.1| Oryza sativa (japonica cultivar-group) Os04g0244800 (Os04g0244800) mRNA, complete cds Length = 801 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| |||||||||||||||||||| Sbjct: 567 cttcagcgacgagaaccccaacgcctgctccgtcatgta 605
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 939 cagatcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 15314329 cagatgttcagcgacgagaaccccaacgcctgctccgtcatgt 15314371
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| |||||||||||||||||||| Sbjct: 18295 cttcagcgacgagaaccccaacgcctgctccgtcatgta 18257
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 939 cagatcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 31692 cagatgttcagcgacgagaaccccaacgcctgctccgtcatgt 31734
>dbj|AK121488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150J09, full insert sequence Length = 803 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| |||||||||||||||||||| Sbjct: 569 cttcagcgacgagaaccccaacgcctgctccgtcatgta 607
>gb|AY112463.1| Zea mays CL22709_1 mRNA sequence Length = 820 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| |||||||||||||||||||| Sbjct: 282 cttcagcgacgagaaccccaacgcctgctccgtcatgta 244
>emb|AJ508227.1|HVU508227 Hordeum vulgare subsp. vulgare mRNA for farnesylated protein 1 Length = 991 Score = 67.9 bits (34), Expect = 8e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgta 982 ||||||||||||||||| |||||||||||||||||||| Sbjct: 549 ttcagcgacgagaaccccaacgcctgctccgtcatgta 586
>emb|CT989397.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 310 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 939 cagatcttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 70 cagatcttcagcgatgagaacccgaacgcctgctccgtgatgta 27
>ref|NM_001058516.1| Oryza sativa (japonica cultivar-group) Os03g0861400 (Os03g0861400) mRNA, complete cds Length = 1194 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 933 ccgccgcagatcttcagcgacgagaacccaaacgc 967 ||||||||| ||||||||||||||||||||||||| Sbjct: 1144 ccgccgcagctcttcagcgacgagaacccaaacgc 1178 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 617 ggtgcacatgcactgcgaggcctgcgc 643 |||| |||||||||||||||||||||| Sbjct: 471 ggtgaacatgcactgcgaggcctgcgc 497
>gb|DQ207719.1| Zea mays cultivar inbred line Mo17 IDP488 marker Length = 310 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 948 agcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||| |||||||||||||||||||| Sbjct: 302 agcgacgagaaccccaacgcctgctccgtcatgta 268
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 933 ccgccgcagatcttcagcgacgagaacccaaacgc 967 ||||||||| ||||||||||||||||||||||||| Sbjct: 124041 ccgccgcagctcttcagcgacgagaacccaaacgc 124007 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 617 ggtgcacatgcactgcgaggcctgcgc 643 |||| |||||||||||||||||||||| Sbjct: 124818 ggtgaacatgcactgcgaggcctgcgc 124792
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 933 ccgccgcagatcttcagcgacgagaacccaaacgc 967 ||||||||| ||||||||||||||||||||||||| Sbjct: 36152604 ccgccgcagctcttcagcgacgagaacccaaacgc 36152570 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctc 973 |||||||| | ||||||||||||||||| ||||||||||| Sbjct: 2848498 cgccgcagctgttcagcgacgagaaccccaacgcctgctc 2848459 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| ||| ||||| |||||||||| Sbjct: 3028892 cttcagcgacgagaaccccaactcctgcgccgtcatgta 3028854 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 617 ggtgcacatgcactgcgaggcctgcgc 643 |||| |||||||||||||||||||||| Sbjct: 36153381 ggtgaacatgcactgcgaggcctgcgc 36153355
>gb|BT009077.1| Triticum aestivum clone wip1c.pk005.e10:fis, full insert mRNA sequence Length = 961 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgta 982 ||||||||||||||||| ||||| |||||||||||||| Sbjct: 546 ttcagcgacgagaaccccaacgcatgctccgtcatgta 583
>ref|NM_001069536.1| Oryza sativa (japonica cultivar-group) Os09g0364800 (Os09g0364800) mRNA, partial cds Length = 749 Score = 58.0 bits (29), Expect = 8e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||||||| |||||||||||| |||||| Sbjct: 564 ttcagcgacgagaaccccaacgcctgctccatcatgt 600
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 58.0 bits (29), Expect = 8e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||||||| |||||||||||| |||||| Sbjct: 11923842 ttcagcgacgagaaccccaacgcctgctccatcatgt 11923878
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 58.0 bits (29), Expect = 8e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||||||| |||||||||||| |||||| Sbjct: 105332 ttcagcgacgagaaccccaacgcctgctccatcatgt 105368
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 58.0 bits (29), Expect = 8e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||||||| |||||||||||| |||||| Sbjct: 28322 ttcagcgacgagaaccccaacgcctgctccatcatgt 28358
>dbj|AK068537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152L24, full insert sequence Length = 751 Score = 58.0 bits (29), Expect = 8e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||||||| |||||||||||| |||||| Sbjct: 566 ttcagcgacgagaaccccaacgcctgctccatcatgt 602
>ref|NM_001055524.1| Oryza sativa (japonica cultivar-group) Os03g0152000 (Os03g0152000) mRNA, complete cds Length = 1400 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctc 973 |||||||| | ||||||||||||||||| ||||||||||| Sbjct: 1068 cgccgcagctgttcagcgacgagaaccccaacgcctgctc 1107
>emb|CT989297.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 310 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 939 cagatcttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 241 cagatcttcagcgatgagaacccgaacgcttgctccgtgatgta 284
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctc 973 |||||||| | ||||||||||||||||| ||||||||||| Sbjct: 120343 cgccgcagctgttcagcgacgagaaccccaacgcctgctc 120304
>dbj|AK102357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H19, full insert sequence Length = 1401 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctgctc 973 |||||||| | ||||||||||||||||| ||||||||||| Sbjct: 1069 cgccgcagctgttcagcgacgagaaccccaacgcctgctc 1108
>ref|NM_001068297.1| Oryza sativa (japonica cultivar-group) Os08g0403300 (Os08g0403300) mRNA, complete cds Length = 453 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||| ||||| ||||||||| ||||||||| Sbjct: 413 tcttcagcgacgacaaccccaacgcctgcgccgtcatgt 451
>ref|NM_001055545.1| Oryza sativa (japonica cultivar-group) Os03g0156600 (Os03g0156600) mRNA, complete cds Length = 822 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| ||| ||||| |||||||||| Sbjct: 508 cttcagcgacgagaaccccaactcctgcgccgtcatgta 546
>gb|AC189630.1| Brassica rapa subsp. pekinensis clone KBrS003G14, complete sequence Length = 129761 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgtaa 983 ||||||||||||||||| |||| ||||||||||||||| Sbjct: 8161 ttcagcgacgagaaccccaacggttgctccgtcatgtaa 8123
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| ||| ||||| |||||||||| Sbjct: 67480 cttcagcgacgagaaccccaactcctgcgccgtcatgta 67518
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||| ||||| ||||||||| ||||||||| Sbjct: 19238206 tcttcagcgacgacaaccccaacgcctgcgccgtcatgt 19238244
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| ||| ||||| |||||||||| Sbjct: 166268 cttcagcgacgagaaccccaactcctgcgccgtcatgta 166230
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||| ||||| ||||||||| ||||||||| Sbjct: 11219 tcttcagcgacgacaaccccaacgcctgcgccgtcatgt 11257
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||| ||||| ||||||||| ||||||||| Sbjct: 160571 tcttcagcgacgacaaccccaacgcctgcgccgtcatgt 160609
>dbj|AK105367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G06, full insert sequence Length = 822 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgta 982 |||||||||||||||||| ||| ||||| |||||||||| Sbjct: 508 cttcagcgacgagaaccccaactcctgcgccgtcatgta 546
>emb|CT836196.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA053L24, full insert sequence Length = 983 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||||||||||||||||| |||||||| ||||||||| Sbjct: 646 cttcagcgacgagaacccgcacgcctgcgccgtcatgt 683
>dbj|AK243289.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100052L04, full insert sequence Length = 925 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||||||||||||||||| |||||||| ||||||||| Sbjct: 648 cttcagcgacgagaacccgcacgcctgcgccgtcatgt 685
>ref|NM_001064343.1| Oryza sativa (japonica cultivar-group) Os06g0542300 (Os06g0542300) mRNA, complete cds Length = 552 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||||||||||||||||| |||||||| ||||||||| Sbjct: 513 cttcagcgacgagaacccgcacgcctgcgccgtcatgt 550
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||||||||||||||||| |||||||| ||||||||| Sbjct: 20056813 cttcagcgacgagaacccgcacgcctgcgccgtcatgt 20056776
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1068H08 Length = 152794 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 944 cttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||||||||||||||||| |||||||| ||||||||| Sbjct: 45087 cttcagcgacgagaacccgcacgcctgcgccgtcatgt 45050
>gb|DQ207718.1| Zea mays cultivar B73 IDP488 marker Length = 256 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 954 gagaacccaaacgcctgctccgtcatgta 982 |||||||| |||||||||||||||||||| Sbjct: 1 gagaaccccaacgcctgctccgtcatgta 29
>gb|AF528183.2| Brassica rapa subsp. pekinensis putative farnesylated protein mRNA, complete cds Length = 702 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||||||| ||||||||| || |||||| Sbjct: 442 ttcagcgacgagaaccctaacgcctgcaccatcatgt 478
>dbj|AK120359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067J06, full insert sequence Length = 602 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgcctg 970 |||||||| ||||||| |||||||| ||||||||||| Sbjct: 268 cgccgcagctcttcagtgacgagaatccaaacgcctg 304
>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH020D15, complete sequence Length = 143633 Score = 50.1 bits (25), Expect = 0.019 Identities = 34/37 (91%) Strand = Plus / Minus Query: 945 ttcagcgacgagaacccaaacgcctgctccgtcatgt 981 ||||||||||||||||| ||||||||| || |||||| Sbjct: 29830 ttcagcgacgagaaccctaacgcctgcaccatcatgt 29794
>dbj|AP006686.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18K09, TM0380, complete sequence Length = 88931 Score = 48.1 bits (24), Expect = 0.076 Identities = 24/24 (100%) Strand = Plus / Minus Query: 605 tgtagtgctgaaggtgcacatgca 628 |||||||||||||||||||||||| Sbjct: 31819 tgtagtgctgaaggtgcacatgca 31796
>emb|AL137918.4|CNS01DWQ Human chromosome 14 DNA sequence BAC R-442G21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162016 Score = 48.1 bits (24), Expect = 0.076 Identities = 24/24 (100%) Strand = Plus / Minus Query: 418 ttgtgaaaggaaagaaggcggctg 441 |||||||||||||||||||||||| Sbjct: 53718 ttgtgaaaggaaagaaggcggctg 53695
>ref|NM_102147.2| Arabidopsis thaliana metal ion binding (AT1G22990) mRNA, complete cds Length = 672 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||| |||||||||||||| ||||||||| |||| |||| Sbjct: 475 tctttagcgacgagaaccctaacgcctgcaccgttatgt 513
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 cgacccgatgaaggtggtcgagc 465 ||||||||||||||||||||||| Sbjct: 1558004 cgacccgatgaaggtggtcgagc 1558026
>gb|AY072474.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 491 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||| |||||||||||||| ||||||||| |||| |||| Sbjct: 419 tctttagcgacgagaaccctaacgcctgcaccgttatgt 457
>gb|AF446887.1|AF446887 Arabidopsis thaliana At1g22990/F19G10_22 mRNA, complete cds Length = 459 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||| |||||||||||||| ||||||||| |||| |||| Sbjct: 419 tctttagcgacgagaaccctaacgcctgcaccgttatgt 457
>gb|AY052659.1| Arabidopsis thaliana At1g22990/F19G10_22 mRNA, complete cds Length = 598 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||| |||||||||||||| ||||||||| |||| |||| Sbjct: 475 tctttagcgacgagaaccctaacgcctgcaccgttatgt 513
>gb|AF370526.1|AF370526 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 598 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||| |||||||||||||| ||||||||| |||| |||| Sbjct: 475 tctttagcgacgagaaccctaacgcctgcaccgttatgt 513
>gb|U64910.1|ATU64910 Arabidopsis thaliana farnesylated protein ATFP7 mRNA, partial cds Length = 498 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||| |||||||||||||| ||||||||| |||| |||| Sbjct: 300 tctttagcgacgagaaccctaacgcctgcaccgttatgt 338
>gb|AF000657.1|ATAF000657 Arabidopsis thaliana BAC F19G10, complete sequence Length = 92948 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Minus Query: 943 tcttcagcgacgagaacccaaacgcctgctccgtcatgt 981 |||| |||||||||||||| ||||||||| |||| |||| Sbjct: 31036 tctttagcgacgagaaccctaacgcctgcaccgttatgt 30998
>dbj|AK242916.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090083M18, full insert sequence Length = 2772 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaac 965 |||||||||||||||||||||| Sbjct: 1770 cttcagcgacgagaacccaaac 1791
>ref|NM_001072674.1| Oryza sativa (japonica cultivar-group) Os12g0144600 (Os12g0144600) mRNA, complete cds Length = 1863 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaac 965 |||||||||||||||||||||| Sbjct: 1440 cttcagcgacgagaacccaaac 1461
>ref|NM_001054439.1| Oryza sativa (japonica cultivar-group) Os02g0711900 (Os02g0711900) mRNA, complete cds Length = 750 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 942 atcttcagcgacgagaacccaaacgcctgc 971 ||||||||||| |||||||| ||||||||| Sbjct: 709 atcttcagcgaggagaaccccaacgcctgc 738
>gb|AC187990.1| Pan troglodytes chromosome 7 clone CH251-381C24, complete sequence Length = 160234 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1078 cccttgaccaaagcaaatggccaggg 1103 |||||||||| ||||||||||||||| Sbjct: 26598 cccttgaccacagcaaatggccaggg 26623
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 646 aggtcataaagaagaggatcga 667 |||||||||||||||||||||| Sbjct: 1456837 aggtcataaagaagaggatcga 1456816
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaac 965 |||||||||||||||||||||| Sbjct: 2195173 cttcagcgacgagaacccaaac 2195194
>emb|AL445565.1|MPULM03 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 3/3 Length = 315079 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 tcaagaaaatcctcaagagatt 370 |||||||||||||||||||||| Sbjct: 293722 tcaagaaaatcctcaagagatt 293743
>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence Length = 191594 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 681 gtgcaatctgcagagccagacc 702 |||||||||||||||||||||| Sbjct: 136654 gtgcaatctgcagagccagacc 136633
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 942 atcttcagcgacgagaacccaaacgcctgc 971 ||||||||||| |||||||| ||||||||| Sbjct: 95030 atcttcagcgaggagaaccccaacgcctgc 95001
>dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L19, TM0070, complete sequence Length = 128164 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 934 cgccgcagatcttcagcgacgagaacccaaacgc 967 |||||||||||||||| || ||||| |||||||| Sbjct: 61824 cgccgcagatcttcagtgatgagaatccaaacgc 61857
>gb|AF093117.1|AF093117 Homo sapiens chromosome 7qtelo BAC E3, complete sequence Length = 147216 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1078 cccttgaccaaagcaaatggccaggg 1103 |||||||||| ||||||||||||||| Sbjct: 142248 cccttgaccacagcaaatggccaggg 142223
>emb|AL807774.10| Mouse DNA sequence from clone RP23-198L2 on chromosome 4, complete sequence Length = 67374 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cacagagccaccaccaccaccc 57 |||||||||||||||||||||| Sbjct: 2914 cacagagccaccaccaccaccc 2893
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 944 cttcagcgacgagaacccaaac 965 |||||||||||||||||||||| Sbjct: 77397 cttcagcgacgagaacccaaac 77418
>dbj|AK239334.1| Sus scrofa mRNA, clone:THY010094A09, expressed in thymus Length = 1437 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 gccaccaccaccacccaacgc 62 ||||||||||||||||||||| Sbjct: 1174 gccaccaccaccacccaacgc 1154
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 802 ccgagccggctgccccggccg 822 ||||||||||||||||||||| Sbjct: 164274 ccgagccggctgccccggccg 164254
>ref|XM_001156467.1| PREDICTED: Pan troglodytes branched chain ketoacid dehydrogenase kinase, transcript variant 2 (BCKDK), mRNA Length = 2134 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 715 agccaatgatgaaaggaaggcagcggaag 687
>ref|XM_001156639.1| PREDICTED: Pan troglodytes branched chain ketoacid dehydrogenase kinase, transcript variant 5 (BCKDK), mRNA Length = 2224 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 715 agccaatgatgaaaggaaggcagcggaag 687
>ref|XM_001156581.1| PREDICTED: Pan troglodytes branched chain ketoacid dehydrogenase kinase, transcript variant 4 (BCKDK), mRNA Length = 2070 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 715 agccaatgatgaaaggaaggcagcggaag 687
>ref|XM_001156527.1| PREDICTED: Pan troglodytes branched chain ketoacid dehydrogenase kinase, transcript variant 3 (BCKDK), mRNA Length = 2072 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 663 agccaatgatgaaaggaaggcagcggaag 635
>ref|XM_001156688.1| PREDICTED: Pan troglodytes branched chain ketoacid dehydrogenase kinase, transcript variant 6 (BCKDK), mRNA Length = 2151 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 715 agccaatgatgaaaggaaggcagcggaag 687
>ref|XM_001156184.1| PREDICTED: Pan troglodytes branched chain ketoacid dehydrogenase kinase, transcript variant 1 (BCKDK), mRNA Length = 2083 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 647 agccaatgatgaaaggaaggcagcggaag 619
>gb|DQ896864.1| Homo sapiens clone FLH195104.01L; RZPDo839B0983D BCKDK mRNA, partial sequence Length = 1239 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 352 agccaatgatgaaaggaaggcagcggaag 324
>gb|DQ893687.1| Synthetic construct Homo sapiens clone FLH195108.01X; RZPDo839F0983D BCKDK mRNA, complete sequence Length = 1239 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 352 agccaatgatgaaaggaaggcagcggaag 324
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 cacagagccaccaccaccacc 56 ||||||||||||||||||||| Sbjct: 5609663 cacagagccaccaccaccacc 5609643
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ccaccaccacccaacgccacc 66 ||||||||||||||||||||| Sbjct: 4466408 ccaccaccacccaacgccacc 4466428
>ref|XM_001112080.1| PREDICTED: Macaca mulatta branched chain ketoacid dehydrogenase kinase, transcript variant 1 (BCKDK), mRNA Length = 1875 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 644 agccaatgatgaaaggaaggcagcggaag 616
>ref|XM_001112116.1| PREDICTED: Macaca mulatta branched chain ketoacid dehydrogenase kinase, transcript variant 2 (BCKDK), mRNA Length = 1933 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 644 agccaatgatgaaaggaaggcagcggaag 616
>ref|XM_001112229.1| PREDICTED: Macaca mulatta branched chain ketoacid dehydrogenase kinase, transcript variant 4 (BCKDK), mRNA Length = 2060 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 644 agccaatgatgaaaggaaggcagcggaag 616
>ref|XM_001112186.1| PREDICTED: Macaca mulatta branched chain ketoacid dehydrogenase kinase, transcript variant 3 (BCKDK), mRNA Length = 2375 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 959 agccaatgatgaaaggaaggcagcggaag 931
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1096 ggccagggcagcagcttgaag 1116 ||||||||||||||||||||| Sbjct: 6019754 ggccagggcagcagcttgaag 6019734
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 896 cggcgccatcgcagcagccaa 916 ||||||||||||||||||||| Sbjct: 579613 cggcgccatcgcagcagccaa 579593
>gb|AY591678.1| Mus musculus clone IgK8-21 immunoglobulin kappa-like gene, partial sequence Length = 2934 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1026 aagaaggggagaagggactgcatgagttgaggg 1058 |||||||||||||||||||| | ||| |||||| Sbjct: 284 aagaaggggagaagggactgaaggagctgaggg 252
>gb|AC113320.7| Mus musculus chromosome 6, clone RP23-445E16, complete sequence Length = 267708 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1035 agaagggactgcatgagttgagggg 1059 ||||||||||| ||||||||||||| Sbjct: 258741 agaagggactgaatgagttgagggg 258717
>gb|AC113524.9| Mus musculus chromosome 6, clone RP23-120I17, complete sequence Length = 216807 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1035 agaagggactgcatgagttgagggg 1059 ||||||||||| ||||||||||||| Sbjct: 35908 agaagggactgaatgagttgagggg 35884
>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167097 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ccaccaccacccaacgccacc 66 ||||||||||||||||||||| Sbjct: 90797 ccaccaccacccaacgccacc 90777
>dbj|AB071122.1| Macaca fascicularis testis cDNA clone:QtsA-19380, similar to human branched chain ketoacid dehydrogenase kinase (BCKDK), mRNA, NM_005881.1 Length = 2167 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 960 agccaatgatgaaaggaaggcagcggaag 932
>gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216954 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1026 aagaaggggagaagggactgcatgagttgaggg 1058 |||||||||||||||||||| | ||| |||||| Sbjct: 146870 aagaaggggagaagggactgaaggagctgaggg 146902
>gb|AY335571.1| Synthetic construct Homo sapiens branched chain alpha-ketoacid dehydrogenase kinase (BCKDK) mRNA, partial cds Length = 1239 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 352 agccaatgatgaaaggaaggcagcggaag 324
>gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, region 25D-25E, BAC clone BACR35L07, complete sequence Length = 193924 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 cacagagccaccaccaccacc 56 ||||||||||||||||||||| Sbjct: 131078 cacagagccaccaccaccacc 131058
>gb|AC106874.4| Homo sapiens BAC clone RP11-390E19 from 2, complete sequence Length = 121348 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1081 ttgaccaaagcaaatggccag 1101 ||||||||||||||||||||| Sbjct: 53416 ttgaccaaagcaaatggccag 53436
>emb|CR626330.1| full-length cDNA clone CS0DI015YK13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1726 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 565 agccaatgatgaaaggaaggcagcggaag 537
>emb|CR622376.1| full-length cDNA clone CS0DG004YL16 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1861 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 590 agccaatgatgaaaggaaggcagcggaag 562
>emb|CR619975.1| full-length cDNA clone CS0DC011YK05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1801 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 559 agccaatgatgaaaggaaggcagcggaag 531
>emb|CR619862.1| full-length cDNA clone CS0DL002YE12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1822 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 574 agccaatgatgaaaggaaggcagcggaag 546
>emb|CR619582.1| full-length cDNA clone CS0DE014YD24 of Placenta of Homo sapiens (human) Length = 1842 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 629 agccaatgatgaaaggaaggcagcggaag 601
>emb|CR619065.1| full-length cDNA clone CS0DK002YM17 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1719 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 560 agccaatgatgaaaggaaggcagcggaag 532
>emb|CR613328.1| full-length cDNA clone CS0DL005YO09 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1714 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 562 agccaatgatgaaaggaaggcagcggaag 534
>emb|CR612524.1| full-length cDNA clone CS0DI041YC02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1991 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 580 agccaatgatgaaaggaaggcagcggaag 552
>emb|CR610444.1| full-length cDNA clone CS0DI060YN24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1824 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 588 agccaatgatgaaaggaaggcagcggaag 560
>emb|CR610635.1| full-length cDNA clone CS0DI085YK18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1745 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 585 agccaatgatgaaaggaaggcagcggaag 557
>emb|CR608547.1| full-length cDNA clone CS0DM009YB20 of Fetal liver of Homo sapiens (human) Length = 1796 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 715 agccaatgatgaaaggaaggcagcggaag 687
>emb|CR607075.1| full-length cDNA clone CS0DI034YK18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1720 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 560 agccaatgatgaaaggaaggcagcggaag 532
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 165638 agccaatgatgaaaggaaggcagcggaag 165610
>emb|CR603431.1| full-length cDNA clone CS0DL001YM02 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1819 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 565 agccaatgatgaaaggaaggcagcggaag 537
>emb|CR600084.1| full-length cDNA clone CS0DI029YM17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1759 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 599 agccaatgatgaaaggaaggcagcggaag 571
>emb|CR598553.1| full-length cDNA clone CS0DA009YH03 of Neuroblastoma of Homo sapiens (human) Length = 1730 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 562 agccaatgatgaaaggaaggcagcggaag 534
>emb|CR596415.1| full-length cDNA clone CS0DI006YC08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1816 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 580 agccaatgatgaaaggaaggcagcggaag 552
>emb|CR593551.1| full-length cDNA clone CS0DA004YC14 of Neuroblastoma of Homo sapiens (human) Length = 1732 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 559 agccaatgatgaaaggaaggcagcggaag 531
>emb|CR590567.1| full-length cDNA clone CS0DB003YG07 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1726 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 565 agccaatgatgaaaggaaggcagcggaag 537
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 946 tcagcgacgagaacccaaacgcctgctcc 974 |||||||||||||||| || ||||||||| Sbjct: 48900 tcagcgacgagaaccccaatgcctgctcc 48928
>emb|CR542093.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0637D for gene BCKDK, branched chain alpha-ketoacid dehydrogenase kinase; complete cds, without stopcodon Length = 1236 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 352 agccaatgatgaaaggaaggcagcggaag 324
>dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT27L02, TM0144, complete sequence Length = 89959 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 agagccaccaccaccacccaa 59 ||||||||||||||||||||| Sbjct: 21708 agagccaccaccaccacccaa 21688
>gb|AC163767.4| Pan troglodytes BAC clone CH251-162B13 from chromosome unknown, complete sequence Length = 193117 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 gtgaaaggaaagaaggcggct 440 ||||||||||||||||||||| Sbjct: 161340 gtgaaaggaaagaaggcggct 161360
>gb|BC007363.2| Homo sapiens branched chain ketoacid dehydrogenase kinase, mRNA (cDNA clone MGC:16138 IMAGE:3630050), complete cds Length = 1822 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 598 agccaatgatgaaaggaaggcagcggaag 570
>ref|NM_005881.1| Homo sapiens branched chain ketoacid dehydrogenase kinase (BCKDK), mRNA gb|AF026548.1|AF026548 Homo sapiens branched chain alpha-ketoacid dehydrogenase kinase precursor, mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1890 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 625 agccaatgatgaaaggaaggcagcggaag 597
>gb|BC009872.2| Homo sapiens branched chain ketoacid dehydrogenase kinase, mRNA (cDNA clone MGC:16430 IMAGE:3944953), complete cds Length = 1787 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 842 agccaaggatgaaaagaaggcagcggaag 870 |||||| ||||||| |||||||||||||| Sbjct: 578 agccaatgatgaaaggaaggcagcggaag 550 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 151,863,063 Number of extensions: 9196089 Number of successful extensions: 322546 Number of sequences better than 10.0: 137 Number of HSP's gapped: 322539 Number of HSP's successfully gapped: 203 Length of query: 1235 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1212 Effective length of database: 18,503,978,556 Effective search space: 22426822009872 Effective search space used: 22426822009872 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)