ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121358:Os08g0556600 131 3e-31
2AK064710:Os12g0182500 30 1.3
3Os01g0273300:Os01g0273300 30 1.7
4Os08g0344700:Os08g0344700 29 2.2
5Os11g0246400:Os11g0246400 29 2.8
6AK111136:Os02g0645000 29 2.8
7AK069623:Os04g0552400 28 4.8

>AK121358:Os08g0556600 |
          Length = 90
 Score =  131 bits (330), Expect = 3e-31
 Identities = 56/58 (96%), Positives = 57/58 (98%)
 Frame = +2

Query: 140 MASGWGINGNKGRCYDFWLDFSSCMSRCRQPSDCGLLREDYLECLHHSKEFQRRNRIY 313
           MASGWGINGNKGRCYDFWLDFS CMSRCRQP+DCGLLREDYLECLHHSKEFQRRNRIY
Sbjct: 1   MASGWGINGNKGRCYDFWLDFSECMSRCRQPTDCGLLREDYLECLHHSKEFQRRNRIY 58



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>AK064710:Os12g0182500 |
          Length = 188

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 16/80 (20%)
 Frame = +2

Query: 65  IVTDHRRERRKGEAAKVDGGEEEEAMASGWGINGNKGRCYD----------------FWL 196
           +V DHRR       + V+ GEEE  +  GW    + G C +                 W 
Sbjct: 50  VVYDHRRS-----FSAVEKGEEEGTVRGGWYYCYDDGGCGNVSARFAGGEETKTMDMLWE 104

Query: 197 DFSSCMSRCRQPSDCGLLRE 256
           DF+  +SR    + C L +E
Sbjct: 105 DFNEELSRAAAAAPCPLSKE 124



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>Os01g0273300:Os01g0273300 |
          Length = 537

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 74  DHRRERRKGEAAKVDGGEEEEA-MASGWGING 166
           +H  ER +GE A  + GEE EA    GW   G
Sbjct: 17  EHEEERGEGEEAAAEQGEEGEAESGGGWSFGG 48



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>Os08g0344700:Os08g0344700 |
          Length = 1364

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 83  RERRKGEAAKVDGGEEEEAMASGWGINGNKGR 178
           R+  +GEA + D G EEE + S   + G+ GR
Sbjct: 716 RDANEGEAEEGDSGSEEELVISECAMTGSSGR 747



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>Os11g0246400:Os11g0246400 |
          Length = 404

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
 Frame = +2

Query: 71  TDHRRERRKGEAAKVDGGEEEEAMASGW------GINGNKGRCYDFWLDFSS 208
           +D R E+R   +      EE+  +AS W       INGN  + Y +WLD ++
Sbjct: 151 SDARSEKRLNWS-----NEEDIRLASAWLHNSIDPINGNDKKSYQYWLDVTA 197



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>AK111136:Os02g0645000 |
          Length = 197

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +2

Query: 116 DGGEEEEAMASGWGINGNKGRCYDFWLDFSSCMSRCRQPSDCG 244
           DGG E   +    G +G  G C D WL   +    CR PS  G
Sbjct: 154 DGGGERVRVLPACG-HGFHGACVDGWLAARASCPTCRAPSRAG 195



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>AK069623:Os04g0552400 |
          Length = 570

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = +2

Query: 122 GEEEEAMASGWGINGNKGRCYDFWLDFSSCMSRCRQPSDCGLLREDYLECL 274
           GEE+ A A+GW       RC    +D S   S C    +     ED   CL
Sbjct: 171 GEEDSAPAAGWLKGKRSRRCKGTGVDLSPTPSACAAGEE-----EDLANCL 216


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 10,952,560
Number of extensions: 184818
Number of successful extensions: 632
Number of sequences better than 10.0: 7
Number of HSP's gapped: 628
Number of HSP's successfully gapped: 7
Length of query: 205
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 109
Effective length of database: 11,555,919
Effective search space: 1259595171
Effective search space used: 1259595171
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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