| Clone Name | FLbaf31b06 |
|---|---|
| Clone Library Name | barley_pub |
>Q0MQH4:NDUS5_PANTR NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 - Pan| troglodytes (Chimpanzee) Length = 106 Score = 31.2 bits (69), Expect = 3.1 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +2 Query: 113 VDGGEEEEAMASGWGINGNKGRCYDF---WLDFSSCMSRCRQPSDCGLLREDYLECLHHS 283 + GE+ MA GRC+ F W++ + + R +C + +D++ECL Sbjct: 20 IQSGEQPYKMA---------GRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQ 70 Query: 284 KEFQRRNRI 310 K +R I Sbjct: 71 KTMRRAGTI 79
>O43920:NDUS5_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 - Homo| sapiens (Human) Length = 106 Score = 31.2 bits (69), Expect = 3.1 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +2 Query: 113 VDGGEEEEAMASGWGINGNKGRCYDF---WLDFSSCMSRCRQPSDCGLLREDYLECLHHS 283 + GE+ MA GRC+ F W++ + + R +C + +D++ECL Sbjct: 20 IQSGEQPYKMA---------GRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQ 70 Query: 284 KEFQRRNRI 310 K +R I Sbjct: 71 KTMRRAGTI 79
>Q4R3M6:NDUS5_MACFA NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 - Macaca| fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 106 Score = 30.8 bits (68), Expect = 4.1 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +2 Query: 176 RCYDF---WLDFSSCMSRCRQPSDCGLLREDYLECLHHSKEFQRRNRI 310 RC+ F W++ + + R +C + +D++ECL K +R N I Sbjct: 32 RCHAFEKEWIECAHGIGAIRAEKECKIEYDDFIECLLRQKTMRRVNAI 79
>Q0MQH3:NDUS5_GORGO NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 - Gorilla| gorilla gorilla (Lowland gorilla) Length = 106 Score = 30.8 bits (68), Expect = 4.1 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +2 Query: 173 GRCYDF---WLDFSSCMSRCRQPSDCGLLREDYLECLHHSKEFQRRNRI 310 GRC+ F W++ + + R +C + +D++ECL K +R I Sbjct: 31 GRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
>P50259:TBB_PORPU Tubulin beta chain - Porphyra purpurea| Length = 457 Score = 29.6 bits (65), Expect = 9.1 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +2 Query: 86 ERRKGEAAKVDGGEEEEAMASGWGINGNK 172 E ++ EAA V+G EEE+A A G +NG++ Sbjct: 421 ELQQYEAATVEGEEEEDAYAEGAVVNGDQ 449 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 65,727,978 Number of extensions: 1068179 Number of successful extensions: 2618 Number of sequences better than 10.0: 5 Number of HSP's gapped: 2618 Number of HSP's successfully gapped: 5 Length of query: 205 Length of database: 100,686,439 Length adjustment: 108 Effective length of query: 97 Effective length of database: 71,062,579 Effective search space: 6893070163 Effective search space used: 6893070163 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)