| Clone Name | FLbaf34a03 |
|---|---|
| Clone Library Name | barley_pub |
>Q7DFU6:YGHX_ECOLI Uncharacterized protein yghX - Escherichia coli| Length = 278 Score = 99.0 bits (245), Expect = 3e-20 Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 4/204 (1%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLYR--GKVALDAAEARHLVEGLDW 341 P VVV+ E G+N I++ A ++ GY AL PD G + + R L + +D Sbjct: 82 PAVVVVHENRGLNPYIEDVARRVAK--AGYIALAPDGLSSVGGYPGNDDKGRELQQQVDP 139 Query: 342 QGAIKDIQASVKWLKQ--NGSSKVGVTGYCMGGALAIASGVLIREVDCVVAFYGTPSSEL 515 + D A+++++++ + KVG+TG+C GG ++ A+ V E+ C V FYG + Sbjct: 140 TNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGR-QAPT 198 Query: 516 ADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHIYPGCSHAFMNASP 695 AD +K AP+ HFAELDT + + E LK+ +E +IYPG +H F N S Sbjct: 199 ADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNHGFHNDST 254 Query: 696 EALENQGAIDLAWSHFATWMGRFL 767 + + A DLAW W ++L Sbjct: 255 PRYD-KSAADLAWQRTLKWFDKYL 277
>P46209:USF_AQUPY Protein usf - Aquifex pyrophilus| Length = 231 Score = 92.4 bits (228), Expect = 3e-18 Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%) Frame = +3 Query: 102 QKVQIQRENTTFDAYVVG-KQNAPGVVVLQEWWGVNNDIKNHAIHASQIG-GGYRALIPD 275 Q V+ ++ Y+ K PGV+V+ EWWG+ + + N + G+ A PD Sbjct: 3 QMVEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPD 62 Query: 276 LYRGKVALDAAEARHLV-----EGLDWQGAIKDIQASVKWLKQ---NGSSKVGVTGYCMG 431 Y GK A + +A L+ +D AI +ASV +LK+ KVGVTG+C G Sbjct: 63 FYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCG 120 Query: 432 GALAI-ASGVLIREVDCVVAFYGTPSSELADPSKALAPIQAHFAELDTYVGFADVTAAKS 608 G L++ +G +D V FYG P D PI AE D +V +V Sbjct: 121 GTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEVI---D 177 Query: 609 LEEKLKSCGVPHEVHIYPGCSHAFMNASPEALENQGAIDLAWSHFATWMGRFL 767 + +K+ GV +V +Y G +HAF+N E + + AW+ + +L Sbjct: 178 IAKKVWKNGVDVKVKVYSGVTHAFLNEKREDVYDPCRAQDAWNLTVAFFKEYL 230
>O67802:DLHH_AQUAE Putative carboxymethylenebutenolidase - Aquifex aeolicus| Length = 231 Score = 81.6 bits (200), Expect = 6e-15 Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 10/221 (4%) Frame = +3 Query: 102 QKVQIQRENTTFDAYVVG-KQNAPGVVVLQEWWGVNNDIKNHAIHASQIGG-GYRALIPD 275 Q V+ ++ Y+ K P V+V EWWG+ + + N ++ G+ A PD Sbjct: 3 QMVEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPD 62 Query: 276 LYRGKVALDAAEARHLVEGLDWQGAIKDI----QASVKWLKQ---NGSSKVGVTGYCMGG 434 Y+G+ A + +A L+ + ++ + ++ QASV+++K+ KVG+TG+C GG Sbjct: 63 FYKGQYADNPDDAGKLMTEM-FEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGG 121 Query: 435 ALAIASGVLIRE-VDCVVAFYGTPSSELADPSKALAPIQAHFAELDTYVGFADVTAAKSL 611 LA+ E VD + FYG P + PI AE D +V +V + Sbjct: 122 TLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEVI---DI 178 Query: 612 EEKLKSCGVPHEVHIYPGCSHAFMNASPEALENQGAIDLAW 734 + + GV +V ++ G +HAF+N E + + AW Sbjct: 179 AKTVWKNGVDVQVKVFSGVTHAFLNEKREDVYDPKRACEAW 219
>P0A115:CLCD_PSESB Carboxymethylenebutenolidase - Pseudomonas sp. (strain B13)| Length = 236 Score = 62.8 bits (151), Expect = 3e-09 Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 24/222 (10%) Frame = +3 Query: 132 TFDAYV--VGKQNAPGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLYRGKV---A 296 TF A V K AP +V+ QE +GVN ++ + + GY A+ PDLY + A Sbjct: 15 TFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETV--SWLVDQGYAAVCPDLYARQAPGTA 72 Query: 297 LDAAEARH------LVEGLDWQGAIKDIQASVKWLKQN--GSSKVGVTGYCMGGALAI-- 446 LD + R L + D + + D++A++++ + + KVG+ GYC+GGALA Sbjct: 73 LDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLV 132 Query: 447 -ASGVLIREVDCVVAFYGTP-SSELADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEK 620 A G VD V +YG +L + P H D +V ++ L + Sbjct: 133 AAKGY----VDRAVGYYGVGLEKQLKKVPEVKHPALFHMGGQDHFV----PAPSRQLITE 184 Query: 621 LKSCGVPHEVHIYPGCSHAFMN-------ASPEALENQGAID 725 +VH Y H+F AS AL N+ +D Sbjct: 185 GFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERRLD 226
>P0A114:CLCD_PSEPU Carboxymethylenebutenolidase - Pseudomonas putida| Length = 236 Score = 62.8 bits (151), Expect = 3e-09 Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 24/222 (10%) Frame = +3 Query: 132 TFDAYV--VGKQNAPGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLYRGKV---A 296 TF A V K AP +V+ QE +GVN ++ + + GY A+ PDLY + A Sbjct: 15 TFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETV--SWLVDQGYAAVCPDLYARQAPGTA 72 Query: 297 LDAAEARH------LVEGLDWQGAIKDIQASVKWLKQN--GSSKVGVTGYCMGGALAI-- 446 LD + R L + D + + D++A++++ + + KVG+ GYC+GGALA Sbjct: 73 LDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLV 132 Query: 447 -ASGVLIREVDCVVAFYGTP-SSELADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEK 620 A G VD V +YG +L + P H D +V ++ L + Sbjct: 133 AAKGY----VDRAVGYYGVGLEKQLKKVPEVKHPALFHMGGQDHFV----PAPSRQLITE 184 Query: 621 LKSCGVPHEVHIYPGCSHAFMN-------ASPEALENQGAID 725 +VH Y H+F AS AL N+ +D Sbjct: 185 GFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERRLD 226
>P95862:DLHH_SULSO Putative carboxymethylenebutenolidase - Sulfolobus solfataricus| Length = 257 Score = 61.2 bits (147), Expect = 8e-09 Identities = 62/237 (26%), Positives = 93/237 (39%), Gaps = 41/237 (17%) Frame = +3 Query: 174 VVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY-RGKVAL----------------- 299 V+V+ E WG+N++IK+ I GY AL P LY R + L Sbjct: 28 VIVIHEIWGLNDNIKD--ISRRLANEGYMALAPQLYTRNEDVLNEGNIQNVMMKVWSIPP 85 Query: 300 ----DAAEARHLVEGLDWQGA-----------------IKDIQASVKWLKQNGSSKVGVT 416 D + ++ LD +G IKD + +++ G K+ Sbjct: 86 EKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTEEQMIKDAIKAYEYVSSQGVKKIVSM 145 Query: 417 GYCMGGALAIASGVLIREVDCVVAFYGTPSSELADPSKALAPIQAHFAELDTYV--GFAD 590 G+CMGG LA + +D + FYG L K PI +A D + G D Sbjct: 146 GFCMGGGLAFQLATEV-PLDGTIVFYGRNPQPLEAIQKIKGPILGLYAGEDPPIDAGLPD 204 Query: 591 VTAAKSLEEKLKSCGVPHEVHIYPGCSHAFMNASPEALENQGAIDLAWSHFATWMGR 761 + +A +K E+ IYPG HAF N + + A D AW +++ R Sbjct: 205 LISAIIKYKK------DLELKIYPGAYHAFFNDRGRSYNKEAAED-AWERVKSFLRR 254
>Q8X8L4:DLHH_ECO57 Putative carboxymethylenebutenolidase - Escherichia coli O157:H7| Length = 271 Score = 60.1 bits (144), Expect = 2e-08 Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 17/216 (7%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY-RGKVALDAAEARHLVEGL--- 335 P V+V+QE +GV+ I++ + GY A+ P+LY R D A+ L+ GL Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114 Query: 336 --DWQGAIKDIQASVKWLKQNGSS--KVGVTGYCMGGALAIASGVLIREVDCVVAFYG-- 497 D Q + D+ W +NG ++ +TG+C GG + ++ VA+YG Sbjct: 115 VPDSQ-VLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKL 173 Query: 498 TPSSELADPSKAL-------APIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHI 656 T L P + + AP+ + LD + V +++ + L++ E+ + Sbjct: 174 TGDKSLNSPKQPVDIATDLNAPVLGLYGGLDNSIPQESV---ETMRQALRAANAKAEIIV 230 Query: 657 YPGCSHAFMNASPEALENQGAIDLAWSHFATWMGRF 764 YP HAF NA + + + W W ++ Sbjct: 231 YPDAGHAF-NADYRPSYHAASAEDGWQRMLEWFKQY 265
>P27136:TFDE1_RALEJ Carboxymethylenebutenolidase 1 - Ralstonia eutropha (strain JMP134)| (Alcaligenes eutrophus) Length = 234 Score = 58.9 bits (141), Expect = 4e-08 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 16/207 (7%) Frame = +3 Query: 120 RENTTFDAYVVGK---QNAPGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY--- 281 R F AY+ GK +AP VV+ QE +G+ I+ +G G+ + PDLY Sbjct: 11 RSGGRFGAYL-GKPTTDSAPIVVIAQEIFGITPFIRETVEWL--VGAGFGCVCPDLYWRQ 67 Query: 282 RGKVALDA------AEARHLVEGLDWQGAIKDIQASVKWLKQN--GSSKVGVTGYCMGGA 437 + LDA +A L D + + D+ ++++ + + +V V GYC+GGA Sbjct: 68 APNIELDANVPSEREQALALFRDFDMEAGVNDLSCAIEYARALPFSNGRVAVVGYCLGGA 127 Query: 438 LAIASGVLIREV-DCVVAFYGTPSSELADPSKALA-PIQAHFAELDTYVGFADVTAAKSL 611 LA V R + DC + +YG + A+ P H D YV A+S+ Sbjct: 128 LAF--DVAARSLADCSIGYYGVGLEKKVSLVPAITRPAMFHMGTKDHYV----TEEARSI 181 Query: 612 EEKLKSCGVPHEVHIYPGCSHAFMNAS 692 E+ +H YP H+F +S Sbjct: 182 LEEHFGRNKNLSLHWYP-VGHSFARSS 207
>P73163:DLHH_SYNY3 Putative carboxymethylenebutenolidase - Synechocystis sp. (strain| PCC 6803) Length = 246 Score = 58.9 bits (141), Expect = 4e-08 Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 25/234 (10%) Frame = +3 Query: 108 VQIQRENTTFDAYV---VGKQNAPGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDL 278 V I +N Y+ V P V+V+QE +GVN+ I++ ++ GY A+ P + Sbjct: 10 VTIPNQNLQIAGYLAEPVAVGQYPVVIVIQEIFGVNSHIRDVTERVAK--EGYVAIAPAI 67 Query: 279 YRGKVALDAAEARHLVEGLDWQGAIKDIQASVKWLKQNGSS-------------KVGVTG 419 Y+ + E + EG++ +KD +S + L ++ +VG+ G Sbjct: 68 YQRQAP--GFEEGYTPEGIEAGRKLKDQTSSAEILSDLEATIAYAQTLPNVKPEEVGLIG 125 Query: 420 YCMGGALAIASGVLIREVDCVVAFYG---------TPSSELADPSKALAPIQAHFAELDT 572 +C GG + + G + V +FYG T + K + A F DT Sbjct: 126 FCFGGWI-VYLGASLPTVKATASFYGAGIPHWAPGTAEPPITYTDKIQGTLYAFFGLEDT 184 Query: 573 YVGFADVTAAKSLEEKLKSCGVPHEVHIYPGCSHAFMNASPEALENQGAIDLAW 734 + AD + +E+ L V H++ YPG H F + + A D AW Sbjct: 185 SIPMADT---EQIEQALTKYQVNHKIFRYPGADHGFFCDQRASYNAEAAAD-AW 234
>Q8Z3B8:DLHH_SALTI Putative carboxymethylenebutenolidase - Salmonella typhi| Length = 270 Score = 58.2 bits (139), Expect = 7e-08 Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 17/216 (7%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY-RGKVALDAAEARHLVEGL--- 335 P V+V+QE +GV+ I++ + GY A+ P+LY R D A+ L+ GL Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114 Query: 336 --DWQGAIKDIQASVKWLKQNGSS--KVGVTGYCMGGALAIASGVLIREVDCVVAFYG-- 497 D Q + D+ W +NG ++ +TG+C GG + ++ VA+YG Sbjct: 115 VPDSQ-VLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKL 173 Query: 498 -------TPSSELADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHI 656 +P + + AP+ ++ DT + V +++ + L++ E+ + Sbjct: 174 VGDTSLNSPKHPVDIATDLNAPVLGLYSGQDTSIPQESV---ETMRQALRAANAKAEIVV 230 Query: 657 YPGCSHAFMNASPEALENQGAIDLAWSHFATWMGRF 764 YP HAF NA ++ + W W ++ Sbjct: 231 YPDAGHAF-NADYRPGYHEASAKDGWQRMLEWFAQY 265
>P56262:DLHH_ECOLI Putative carboxymethylenebutenolidase - Escherichia coli| Length = 271 Score = 58.2 bits (139), Expect = 7e-08 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 17/216 (7%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY-RGKVALDAAEARHLVEGL--- 335 P V+V+QE +GV+ I++ + GY A+ P+LY R D A+ L+ GL Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114 Query: 336 --DWQGAIKDIQASVKWLKQNGSS--KVGVTGYCMGGALAIASGVLIREVDCVVAFYG-- 497 D Q + D+ W +NG ++ +TG+C GG + ++ VA+YG Sbjct: 115 VPDSQ-VLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKL 173 Query: 498 TPSSELADPSKAL-------APIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHI 656 T L P + + API + D + V +++ + L++ E+ + Sbjct: 174 TGDKSLNSPKQPVDIATDLNAPILGLYGGQDNSIPQESV---ETMRQALRAANAKAEIIV 230 Query: 657 YPGCSHAFMNASPEALENQGAIDLAWSHFATWMGRF 764 YP HAF NA + + + W W ++ Sbjct: 231 YPDAGHAF-NADYRPSYHAASAEDGWQRMLEWFKQY 265
>Q9L6M9:DLHH_SALTY Putative carboxymethylenebutenolidase - Salmonella typhimurium| Length = 270 Score = 57.8 bits (138), Expect = 9e-08 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 17/216 (7%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY-RGKVALDAAEARHLVEGL--- 335 P V+V+QE +GV+ I++ + GY A+ P+LY R D A+ L+ GL Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114 Query: 336 --DWQGAIKDIQASVKWLKQNGSS--KVGVTGYCMGGALAIASGVLIREVDCVVAFYG-- 497 D Q + D+ W +NG ++ +TG+C GG + ++ VA+YG Sbjct: 115 VPDSQ-VLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKL 173 Query: 498 -------TPSSELADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHI 656 +P + + AP+ + DT + V +++ + L++ E+ + Sbjct: 174 VGDTSLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESV---ETMRQALRAANAKAEIVV 230 Query: 657 YPGCSHAFMNASPEALENQGAIDLAWSHFATWMGRF 764 YP HAF NA ++ + W W ++ Sbjct: 231 YPDAGHAF-NADYRPGYHEASAKDGWQRMLEWFAQY 265
>Q8ZAL4:DLHH_YERPE Putative carboxymethylenebutenolidase - Yersinia pestis| Length = 267 Score = 57.4 bits (137), Expect = 1e-07 Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 17/212 (8%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY-RGKVALDAAEARHLVEGL--- 335 P V+V+QE +GV+ I++ ++ GY A+ P+LY R A D + LV L Sbjct: 47 PVVIVVQEIFGVHEHIQDICRRLAK--QGYLAIAPELYFRQGDAKDYSNINELVNNLVKK 104 Query: 336 --DWQGAIKDIQASVKWLKQNG--SSKVGVTGYCMGGALAIASGVLIREVDCVVAFYG-- 497 D Q + D+ + W ++G + K+ +TG+C GG +A ++ VA+YG Sbjct: 105 VPDRQ-VLVDLDHTAHWASRHGGDTKKLAITGFCWGGRIAWLYAAHNPQLKAAVAWYGKL 163 Query: 498 -------TPSSELADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHI 656 P + AP+ + DT + + +++ + L++ E+ + Sbjct: 164 VGEKTLFLPKYPVDVAIDLCAPVLGLYGGKDTSIPAEHI---ETMRQALRAANADAEIIV 220 Query: 657 YPGCSHAFMNASPEALENQGAIDLAWSHFATW 752 YP HAF NA + + W W Sbjct: 221 YPEAGHAF-NADYRPSYHAESAQDGWQRMLDW 251
>P71505:DLHH_METEX Putative carboxymethylenebutenolidase precursor - Methylobacterium| extorquens (Protomonas extorquens) Length = 291 Score = 54.3 bits (129), Expect = 1e-06 Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 17/216 (7%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY--RGKVAL--DAAE-ARHLVEG 332 P ++V+QE +GV+ IK+ +++G Y AL P+LY +G V+ D + +V Sbjct: 79 PTILVVQEIFGVHEHIKDVCRRLAKLG--YFALAPELYARQGDVSTLTDIQQIVSEVVSK 136 Query: 333 LDWQGAIKDIQASVKWLKQNG---SSKVGVTGYCMGGALAIASGVLIREVDCVVAFYG-- 497 + + D+ A+V + K G ++++G+TG+C GG + V VA+YG Sbjct: 137 VPDDQVMSDLDAAVAFAKGTGKADTARLGITGFCWGGRITWLYAAHNPAVKAGVAWYGRL 196 Query: 498 -------TPSSELADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHI 656 P + + + AP+ + D + A + K E ++ G + + Sbjct: 197 VGDSSALMPKNPVDVAADLKAPVLGLYGGADQGIPVATIDRMK---EACRAAGKTCDFVV 253 Query: 657 YPGCSHAFMNASPEALENQGAIDLAWSHFATWMGRF 764 YP HAF + + A D W W ++ Sbjct: 254 YPEAGHAFHADYRPSYRAEPAQD-GWKRLQDWFRQY 288
>Q43914:DLHH_AZOBR Putative carboxymethylenebutenolidase - Azospirillum brasilense| Length = 231 Score = 47.4 bits (111), Expect = 1e-04 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%) Frame = +3 Query: 123 ENTTFDAYVV---GKQNAPGVVVLQEWWGVNNDIKNHA-IHASQIGGGYRALIPDLY--- 281 ++ +F AYV G APG+VV+QE +GVN +++ A+Q G+ A+ PDL+ Sbjct: 10 DDGSFSAYVAKPAGGGPAPGLVVIQEIFGVNQVMRDLCDAFAAQ---GWLAVCPDLFWRQ 66 Query: 282 ------RGKVALDAAEARHLVEGLDWQGAIKDIQASVKWLKQNGSSKVGVTGYCMGGALA 443 K + A L+ G+D +D + + G +++ + G L Sbjct: 67 EPGVQITDKTQEEWNRAFALMNGMD-----QDKRWTTSRPPCRGCARIRIAPAKRVGRLL 121 Query: 444 IASGVLIR-----EVDCVVAFYGTPSSELADPSKALA-PIQAHFAELDTYVGFADVTAAK 605 + + + D V++YG L + ++ P+ H AE D +V A+ Sbjct: 122 LGRRLAFMMAARSDSDANVSYYGVGLDGLVGEAASITKPLLMHIAEKDQFV------PAE 175 Query: 606 SLEEKLKSC-GVPH-EVHIYPGCSHAFMNA-----SPEALE 707 + E+ L + G P+ H+YPG HAF A PEA E Sbjct: 176 AREKVLAAVKGNPNVTAHVYPGVDHAFARAGGAHFEPEAAE 216
>O67988:CLCD_RHOOP Carboxymethylenebutenolidase - Rhodococcus opacus (Nocardia opaca)| Length = 252 Score = 42.0 bits (97), Expect = 0.005 Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 17/215 (7%) Frame = +3 Query: 174 VVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLYRG-----KVALDAAEARHLVEGLD 338 +V+L + +GV ++ A ++ G+ +IPD++ DAA AR LD Sbjct: 43 IVLLTDIFGVTPFYRHLAAMLAE--KGHDVVIPDVFHRVGHATDPGRDAALARR--RQLD 98 Query: 339 WQGAIKDIQASVKWLKQNGSSKVGVTGYCMGGALAIASGVLIREVDCVVAFY-----GTP 503 + AI+DI+ +V + + GV G+C+GG+ A+ + + V A Y G P Sbjct: 99 DRLAIEDIERTVAHTVDDQQT-FGVLGFCLGGSFALLTAA--AHPNQVTATYYAFPKGAP 155 Query: 504 SSE--LADPSKAL----APIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHIYPG 665 ++ + P +A P+ H+ D Y+ ++ LE+ L S P E+ Y Sbjct: 156 GAKVPVKPPLEAADAIDGPVLCHWGR-DDYIDHEEI---DQLEQILASAPGPSEIRWYDN 211 Query: 666 CSHAFMNASPEALE-NQGAIDLAWSHFATWMGRFL 767 H+F+ E + A +W + R+L Sbjct: 212 AGHSFLAGLTEPNHPSTAAAHDSWQRTVEFFERYL 246
>P15714:LP61_EIMTE Antigen LPMC-61 - Eimeria tenella| Length = 255 Score = 40.8 bits (94), Expect = 0.011 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -3 Query: 603 WPRSHQQTRHKCQAPQNEPGLEREPWKDQQALTMASRR--KQQHNR 472 WP HQQ + + Q PQ +P +++E W QQ ++ +QQH R Sbjct: 66 WPEQHQQAQQQQQWPQQQPQMQQEQWPQQQPQVQQQQQWPQQQHRR 111
>Q9ZT66:E134_MAIZE Endo-1,3;1,4-beta-D-glucanase precursor - Zea mays (Maize)| Length = 303 Score = 39.7 bits (91), Expect = 0.024 Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 2/146 (1%) Frame = +3 Query: 141 AYVVGKQNAPGVVVL-QEWWGVNNDIKNHAIHASQIGGGYRALIPDLYRGKVALDAAEAR 317 AYV G ++ VVL + +G + + GY ++PD +G D Sbjct: 59 AYVSGAASSSRAVVLASDVFGYEAPLLRQIVD-KVAKAGYFVVVPDFLKGDYLDDKKNFT 117 Query: 318 HLVEGLDWQGAIKDIQASVKWLKQNGSSKVGVTGYCMGGALAIASGVLIREVDCVVAFYG 497 +E A +D + LK+ G S V V GYC GG L++ G + D Sbjct: 118 EWLEAHSPVKAAEDAKPLFAALKKEGKS-VAVGGYCWGGKLSVEVG---KTSDVKAVCLS 173 Query: 498 TPSSELADPSKALA-PIQAHFAELDT 572 P S AD K + PI+ A+ DT Sbjct: 174 HPYSVTADDMKEVKWPIEILGAQNDT 199
>P27100:TCBE_PSESQ Carboxymethylenebutenolidase - Pseudomonas sp. (strain P51)| Length = 238 Score = 39.3 bits (90), Expect = 0.032 Identities = 52/204 (25%), Positives = 76/204 (37%), Gaps = 20/204 (9%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLY---------RGKVALDAAEARH 320 P V+V QE +GVN + + A G+ L PDLY + A A Sbjct: 29 PVVMVAQEIFGVNPFMTE--VLAWLASEGFVGLCPDLYWRHGPGIEFDPNDEVQRARALG 86 Query: 321 LVEGLDWQGAIKDIQASVKWLKQNG--SSKVGVTGYCMGGALA---IASGVLIREVDCVV 485 + + + D++A+V + V V GYC+GGALA A G C V Sbjct: 87 MFRDYKLEDGVADLRATVAYAASQPFCDGGVAVIGYCLGGALAYEVAAEGF----AQCCV 142 Query: 486 AFYGTPSSELADPSKAL-APIQAHFAELDTYVGFADVTAAKSLEEKLKSCGVPHEVHIYP 662 +YG + + ++ + P H D +V A+ L +H Y Sbjct: 143 GYYGVGFEKRLERARLVKTPSMFHMGTNDHFV----TAEARQLITNAFEANPAIALHWY- 197 Query: 663 GCSHAFM-----NASPEALENQGA 719 H+F N SPEA A Sbjct: 198 DAGHSFARASSPNFSPEATRTANA 221
>P39721:YAE9_YEAST Uncharacterized protein YAL049C - Saccharomyces cerevisiae (Baker's| yeast) Length = 246 Score = 36.2 bits (82), Expect = 0.27 Identities = 49/197 (24%), Positives = 71/197 (36%), Gaps = 16/197 (8%) Frame = +3 Query: 138 DAYVVGKQNAPG--VVVLQEWWGVNNDIKNHAIHASQIGG-GYRALIPDLYRGK------ 290 D Y G + +V+L + +G N N + A + GY +PD+ G Sbjct: 31 DTYAAGSTSPKEKVIVILTDVYG--NKFNNVLLTADKFASAGYMVFVPDILFGDAISSDK 88 Query: 291 -VALDAAEARHLVEGLDWQGAIKDIQASVKWLKQNGSSK-VGVTGYCMGGALAIA----- 449 + DA RH E K + +K LK K +GV GYC G A+ Sbjct: 89 PIDRDAWFQRHSPEVTK-----KIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQHISGD 143 Query: 450 SGVLIREVDCVVAFYGTPSSELADPSKALAPIQAHFAELDTYVGFADVTAAKSLEEKLKS 629 G+ +F E D K PI AE D EEKLK Sbjct: 144 GGLANAAAIAHPSFVSIEEIEAIDSKK---PILISAAEED---HIFPANLRHLTEEKLKD 197 Query: 630 CGVPHEVHIYPGCSHAF 680 +++ ++ G +H F Sbjct: 198 NHATYQLDLFSGVAHGF 214
>Q9KNR1:TPIS_VIBCH Triosephosphate isomerase - Vibrio cholerae| Length = 257 Score = 34.3 bits (77), Expect = 1.0 Identities = 32/124 (25%), Positives = 54/124 (43%) Frame = +3 Query: 84 NDAGQFQKVQIQRENTTFDAYVVGKQNAPGVVVLQEWWGVNNDIKNHAIHASQIGGGYRA 263 N+AG+ + V ++ N DAY V N ++ + W + A A +I RA Sbjct: 136 NEAGETEAVCARQINAVIDAYGVEALNG-AIIAYEPIWAIGTGKAATADDAQRIHASIRA 194 Query: 264 LIPDLYRGKVALDAAEARHLVEGLDWQGAIKDIQASVKWLKQNGSSKVGVTGYCMGGALA 443 LI A DAA A ++ + + G++K A+ + + + + G +GGA Sbjct: 195 LI-------AAKDAAVAEQVI--IQYGGSVKPENAASYFAQPD------IDGALVGGASL 239 Query: 444 IASG 455 A G Sbjct: 240 DAKG 243
>P60018:HFE_PANTR Hereditary hemochromatosis protein homolog precursor - Pan| troglodytes (Chimpanzee) Length = 348 Score = 33.5 bits (75), Expect = 1.7 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -3 Query: 621 ASPPTTWPRSHQQTRHKCQAPQNEPGLERE-PWKDQQALTMASRRKQQHNRPLESKLH 451 A+ P WP + RHK +A QN LER+ P + QQ L + Q PL H Sbjct: 157 AAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTH 214
>Q30201:HFE_HUMAN Hereditary hemochromatosis protein precursor - Homo sapiens (Human)| Length = 348 Score = 33.5 bits (75), Expect = 1.7 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -3 Query: 621 ASPPTTWPRSHQQTRHKCQAPQNEPGLERE-PWKDQQALTMASRRKQQHNRPLESKLH 451 A+ P WP + RHK +A QN LER+ P + QQ L + Q PL H Sbjct: 157 AAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTH 214
>Q6L8H4:KRA51_HUMAN Keratin-associated protein 5-1 - Homo sapiens (Human)| Length = 278 Score = 32.7 bits (73), Expect = 3.0 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%) Frame = +2 Query: 428 GGCSGNCEWSFDSRG-RLCCCFLRDAIVRAC*SFQGSRSNPGSFCGA*HLCRVC*CDRG 601 GGC C G +CCC +C S GS+ GS C C+ C C G Sbjct: 195 GGCGSGCGGCGSGCGVPVCCCSCS-----SCGSCAGSKGGCGSSCSQCSCCKPCCCSSG 248
>Q7MH47:TPIS_VIBVY Triosephosphate isomerase - Vibrio vulnificus (strain YJ016)| Length = 256 Score = 32.3 bits (72), Expect = 3.9 Identities = 29/118 (24%), Positives = 51/118 (43%) Frame = +3 Query: 84 NDAGQFQKVQIQRENTTFDAYVVGKQNAPGVVVLQEWWGVNNDIKNHAIHASQIGGGYRA 263 N+AG+ + V ++ N DAY V N ++ + W + A A +I RA Sbjct: 136 NEAGETEAVCARQINAVIDAYGVEALNG-AIIAYEPIWAIGTGKAATAEDAQRIHASIRA 194 Query: 264 LIPDLYRGKVALDAAEARHLVEGLDWQGAIKDIQASVKWLKQNGSSKVGVTGYCMGGA 437 +I A DAA A ++ + + G++K A + + + + G +GGA Sbjct: 195 MI-------AAKDAAVAEQVI--IQYGGSVKPENAEAYFAQPD------IDGALVGGA 237
>Q8DCQ3:TPIS_VIBVU Triosephosphate isomerase - Vibrio vulnificus| Length = 256 Score = 32.3 bits (72), Expect = 3.9 Identities = 29/118 (24%), Positives = 51/118 (43%) Frame = +3 Query: 84 NDAGQFQKVQIQRENTTFDAYVVGKQNAPGVVVLQEWWGVNNDIKNHAIHASQIGGGYRA 263 N+AG+ + V ++ N DAY V N ++ + W + A A +I RA Sbjct: 136 NEAGETEAVCARQINAVIDAYGVEALNG-AIIAYEPIWAIGTGKAATAEDAQRIHASIRA 194 Query: 264 LIPDLYRGKVALDAAEARHLVEGLDWQGAIKDIQASVKWLKQNGSSKVGVTGYCMGGA 437 +I A DAA A ++ + + G++K A + + + + G +GGA Sbjct: 195 MI-------AAKDAAVAEQVI--IQYGGSVKPENAEAYFAQPD------IDGALVGGA 237
>O07835:IORA_PYRKO Indolepyruvate oxidoreductase subunit iorA - Pyrococcus| kodakaraensis (Thermococcus kodakaraensis) Length = 647 Score = 32.3 bits (72), Expect = 3.9 Identities = 22/56 (39%), Positives = 26/56 (46%) Frame = +3 Query: 432 GALAIASGVLIREVDCVVAFYGTPSSELADPSKALAPIQAHFAELDTYVGFADVTA 599 G AIA G L + A+ GTPSSEL D A+A + E T A TA Sbjct: 21 GNHAIARGALEANIAVFAAYPGTPSSELTDTMAAVAKKAGVYMEYSTNEKVAFETA 76
>Q8N878:FRMD1_HUMAN FERM domain-containing protein 1 - Homo sapiens (Human)| Length = 549 Score = 32.0 bits (71), Expect = 5.1 Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Frame = -3 Query: 741 SGTMPGQWHPDSREPQVMRS*RHESIQGICALHVVPHKT*ASPPTTWPRSHQQTRHKCQA 562 SG W +SRE S+ +H + K +S P T RSH TR QA Sbjct: 399 SGIKANSWLRESREM---------SVDVPLEVHGLHEKEPSSSPRT-SRSHPSTRGDSQA 448 Query: 561 PQNEP-------GLEREPWKDQQALTMASRRKQQHNRPLESKLHSQLPEHP 430 + EP G E Q +T A ++QH+ L+ QL HP Sbjct: 449 TRQEPCTQVRTRGQSAEAVHQIQEMT-AGVSEEQHSHGLDDMQLHQLALHP 498
>P26341:MANB_SALTY Phosphomannomutase - Salmonella typhimurium| Length = 456 Score = 31.6 bits (70), Expect = 6.6 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +3 Query: 453 GVLIREVDCVVAFYGTPSSELADPSKALAPIQAHFAE 563 G L+R+ G +S LA+P+ A+A ++AHFAE Sbjct: 363 GELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAE 399
>Q01411:MANB_SALMO Phosphomannomutase - Salmonella montevideo| Length = 456 Score = 31.6 bits (70), Expect = 6.6 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +3 Query: 453 GVLIREVDCVVAFYGTPSSELADPSKALAPIQAHFAE 563 G L+R+ G +S LA+P+ A+A ++AHFAE Sbjct: 363 GELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAE 399
>Q07505:DLHH_YEAST Putative carboxymethylenebutenolidase - Saccharomyces cerevisiae| (Baker's yeast) Length = 273 Score = 31.6 bits (70), Expect = 6.6 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 13/124 (10%) Frame = +3 Query: 168 PGVVVLQEWWGVNNDIKNHAIHASQIGGGYRALIPDLYRGKVALDAAEARHLVEGLDWQG 347 PGV++ E + V ++ + GY + P +Y + +A + V+G D Sbjct: 36 PGVILYSEIYQVTGPVRRFGQRIAS--EGYVVVAPAIYHNFMGPEALP--YDVQGTDIGN 91 Query: 348 AIKDIQASVKW-------------LKQNGSSKVGVTGYCMGGALAIASGVLIREVDCVVA 488 K + + L Q ++G TG C+GG LA + +L + V C Sbjct: 92 EYKIKKPLESYDEDNKLCCDLLFQLPQFDGKRIGSTGMCLGGHLAFRA-LLDKRVTCATC 150 Query: 489 FYGT 500 F+ T Sbjct: 151 FFPT 154
>Q91W67:UBL7_MOUSE Ubiquitin-like protein 7 - Mus musculus (Mouse)| Length = 380 Score = 31.2 bits (69), Expect = 8.6 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = -2 Query: 331 PSTRCRASAASKATFPRYKSGISALYPPPIWEAWMA*FLISLLTPHHSCNTTTPG 167 PSTR S+++ ++ P A P PI ++ +A L TP S +T TPG Sbjct: 238 PSTRSTPSSSTPSSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPG 292
>Q52942:FLAD2_RHIME Flagellin D - Rhizobium meliloti (Sinorhizobium meliloti)| Length = 395 Score = 31.2 bits (69), Expect = 8.6 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Frame = +3 Query: 417 GYCMGGALAIASGVLIREVDCV----VAFYGTPSSELADPSKALAPIQAHFAELDTYVG- 581 G G A+A GV +V+ V VA G P E+A + A API A +DT G Sbjct: 221 GAVFQGNYALAGGVNYVKVEGVWVEAVASSGAPGQEVAAVTTAAAPITADSWAVDTTAGP 280 Query: 582 FADVTAAKSLE 614 A V A S+E Sbjct: 281 AASVPAPASIE 291 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 219,939,895 Number of extensions: 5072153 Number of successful extensions: 14157 Number of sequences better than 10.0: 33 Number of HSP's gapped: 14134 Number of HSP's successfully gapped: 34 Length of query: 390 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 275 Effective length of database: 69,142,514 Effective search space: 19014191350 Effective search space used: 19014191350 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)