ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf33p14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103450:Os02g0564500 | 263 | 1e-70 | 2 | Os01g0219100:Os01g0219100 | 120 | 2e-27 | 3 | AK104440:Os06g0608600 | 58 | 9e-09 | 4 | AK061418:Os06g0608600 | 58 | 9e-09 | 5 | AK109425:Os06g0300300 | 54 | 2e-07 | 6 | AK068813:Os06g0300300 | 54 | 2e-07 | 7 | Os04g0204000:Os04g0204000 | 30 | 3.4 | 8 | AK065650:Os01g0299500 | 29 | 4.4 | 9 | AK119828: | 28 | 7.6 | 10 | AK110892:Os04g0206500 | 28 | 7.6 | 11 | AK104342:Os02g0732900 | 28 | 9.9 | 12 | AK065796:Os02g0732900 | 28 | 9.9 |
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>AK103450:Os02g0564500 | Length = 171 Score = 263 bits (673), Expect = 1e-70 Identities = 136/174 (78%), Positives = 143/174 (82%) Frame = +3 Query: 204 MDKMRDALERAKMLVGMEFDXXXXXXXXXXQSFFDDINRHCALNTTQRLYGFAICLAAGL 383 MD MR ALERA+MLVGME D QSFFDD+ R+CAL TTQRLYGFAICLAAGL Sbjct: 1 MDTMRGALERARMLVGMEVDEESAPEE---QSFFDDVTRNCALTTTQRLYGFAICLAAGL 57 Query: 384 TCTFLSMLVFFNPVKFGVTFTLGNAMALGSTAFLIGPKRQFDMMLDPVRXXXXXXXXXXX 563 TCTFLSMLVFFNPVKFGVTFTLGN MALGSTAFLIGPKRQFDMMLD VR Sbjct: 58 TCTFLSMLVFFNPVKFGVTFTLGNLMALGSTAFLIGPKRQFDMMLDSVRIYATAVYIASI 117 Query: 564 XVSLFCALLVHSKLLTLLAIILEFGALIWYSLSYIPFARSVVSKVMASCFETEF 725 ++LFCAL VHSKLLTLLAIILEFGAL+WYSLSYIPFARSVVSKVM SCF+TEF Sbjct: 118 IIALFCALFVHSKLLTLLAIILEFGALVWYSLSYIPFARSVVSKVMTSCFDTEF 171
>Os01g0219100:Os01g0219100 | Length = 141 Score = 120 bits (300), Expect = 2e-27 Identities = 61/118 (51%), Positives = 75/118 (63%) Frame = +3 Query: 297 SFFDDINRHCALNTTQRLYGFAICLAAGLTCTFLSMLVFFNPVKFGVTFTLGNAMALGST 476 S D C+L+ QR+YGFA CL AGL LS++VF P+KF V FT GN +A+GST Sbjct: 24 SILGDTEGICSLSPVQRVYGFAACLVAGLALMILSLVVFVRPIKFAVMFTFGNILAVGST 83 Query: 477 AFLIGPKRQFDMMLDPVRXXXXXXXXXXXXVSLFCALLVHSKLLTLLAIILEFGALIW 650 AFLIGP +Q MMLDPVR ++L AL +HSK+LTL+AII E AL W Sbjct: 84 AFLIGPSQQLRMMLDPVRVYATAIYGGFVFLALIFALWIHSKVLTLIAIICEICALFW 141
>AK104440:Os06g0608600 | Length = 231 Score = 58.2 bits (139), Expect = 9e-09 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 12/138 (8%) Frame = +3 Query: 336 TTQRLYGFAICLAAGLTCTFLSMLVFFN-----PVKFGVTFTLGNAMALGSTAFLIGPKR 500 +++ L F + LA+G+ F++ +F P KF + FT G A +GS L GPK Sbjct: 92 SSKSLVYFGLFLASGIFLVFIAFTIFLPVMVIMPQKFAICFTAGCAFIIGSFFALKGPKN 151 Query: 501 QFDMMLDPVRXXXXXXXXXXXXVSLFCALLVHSKLLTLLAIILEFGALIWYSLSYIP--- 671 Q M+ R +++ ++++HS +L++ L+ AL +Y++SY P Sbjct: 152 QLYHMISKERLPFTMGFVGSMAATIYVSMVLHSYILSVFFSCLQVLALAYYAISYFPGGS 211 Query: 672 ----FARSVVSKVMASCF 713 F S + + CF Sbjct: 212 AGMKFLSSALVSSVLRCF 229
>AK061418:Os06g0608600 | Length = 231 Score = 58.2 bits (139), Expect = 9e-09 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 12/138 (8%) Frame = +3 Query: 336 TTQRLYGFAICLAAGLTCTFLSMLVFFN-----PVKFGVTFTLGNAMALGSTAFLIGPKR 500 +++ L F + LA+G+ F++ +F P KF + FT G A +GS L GPK Sbjct: 92 SSKSLVYFGLFLASGIFLVFIAFTIFLPVMVIMPQKFAICFTAGCAFIIGSFFALKGPKN 151 Query: 501 QFDMMLDPVRXXXXXXXXXXXXVSLFCALLVHSKLLTLLAIILEFGALIWYSLSYIP--- 671 Q M+ R +++ ++++HS +L++ L+ AL +Y++SY P Sbjct: 152 QLYHMISKERLPFTMGFVGSMAATIYVSMVLHSYILSVFFSCLQVLALAYYAISYFPGGS 211 Query: 672 ----FARSVVSKVMASCF 713 F S + + CF Sbjct: 212 AGMKFLSSALVSSVLRCF 229
>AK109425:Os06g0300300 | Length = 228 Score = 53.9 bits (128), Expect = 2e-07 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 12/131 (9%) Frame = +3 Query: 357 FAICLAAGLTCTFLSMLVFFN-----PVKFGVTFTLGNAMALGSTAFLIGPKRQFDMMLD 521 F + LA G+ F++ +F P KF + FTLG + + S L GP QF M Sbjct: 96 FGLFLATGIFFVFIAFALFLPVMVIMPQKFAICFTLGCGLIIASIFALKGPASQFAHMTS 155 Query: 522 PVRXXXXXXXXXXXXVSLFCALLVHSKLLTLLAIILEFGALIWYSLSYIP-------FAR 680 R +++ ++ +HS L+++ +L+ +L +Y++SY P F Sbjct: 156 MERLPFTGALIGCMVGTIYVSMFLHSYFLSVIFSVLQVLSLAYYTISYFPGGSSGLKFIS 215 Query: 681 SVVSKVMASCF 713 S + + SCF Sbjct: 216 SSLLSSVTSCF 226
>AK068813:Os06g0300300 | Length = 228 Score = 53.9 bits (128), Expect = 2e-07 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 12/131 (9%) Frame = +3 Query: 357 FAICLAAGLTCTFLSMLVFFN-----PVKFGVTFTLGNAMALGSTAFLIGPKRQFDMMLD 521 F + LA G+ F++ +F P KF + FTLG + + S L GP QF M Sbjct: 96 FGLFLATGIFFVFIAFALFLPVMVIMPQKFAICFTLGCGLIIASIFALKGPASQFAHMTS 155 Query: 522 PVRXXXXXXXXXXXXVSLFCALLVHSKLLTLLAIILEFGALIWYSLSYIP-------FAR 680 R +++ ++ +HS L+++ +L+ +L +Y++SY P F Sbjct: 156 MERLPFTGALIGCMVGTIYVSMFLHSYFLSVIFSVLQVLSLAYYTISYFPGGSSGLKFIS 215 Query: 681 SVVSKVMASCF 713 S + + SCF Sbjct: 216 SSLLSSVTSCF 226
>Os04g0204000:Os04g0204000 | Length = 205 Score = 29.6 bits (65), Expect = 3.4 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -2 Query: 145 FGEGWCGRIPSSEEDGSVLSRPADFTIEPREQIGTTTLPFF 23 +GE W GR+P EDG L R +++ + T LP F Sbjct: 148 YGEVWAGRVPLPMEDGGDLRRRGVLSVD----LATADLPPF 184
>AK065650:Os01g0299500 | Length = 177 Score = 29.3 bits (64), Expect = 4.4 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -1 Query: 884 QEGGNSGEKVNMISNRRSWPW 822 +EGG++G VNMIS++ PW Sbjct: 24 REGGDNGTDVNMISSQAKTPW 44
>AK119828: | Length = 699 Score = 28.5 bits (62), Expect = 7.6 Identities = 17/55 (30%), Positives = 21/55 (38%) Frame = +3 Query: 39 VVPICSLGSIVKSAGRERTLPSSSLDGILPHQPSPKGRWPCSRGCLHRRRRAPAS 203 V+P + + S R L +S PSP WPCSR R A S Sbjct: 617 VLPTPTTATSATSPSARRPLRRASPAARASTSPSPPSAWPCSRSAATSRTCASVS 671
>AK110892:Os04g0206500 | Length = 462 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -2 Query: 145 FGEGWCGRIPSSEEDGSVLSRPADFTIEPREQIGTTTLPFF 23 +GE W GR+P +DG L R +++ + T LP F Sbjct: 148 YGEVWAGRVPLPMDDGGDLRRRGVLSVD----LATADLPPF 184
>AK104342:Os02g0732900 | Length = 449 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -3 Query: 147 PSVKAGAGGSRPARKMAVFFHGQRISQ----LSLGNKLVLPLYLFFLPKTG 7 P V GA G + AR F H QR Q ++ + L+ P Y++ LP++G Sbjct: 347 PEVHIGASGHK-ARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWHLPESG 396
>AK065796:Os02g0732900 | Length = 449 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -3 Query: 147 PSVKAGAGGSRPARKMAVFFHGQRISQ----LSLGNKLVLPLYLFFLPKTG 7 P V GA G + AR F H QR Q ++ + L+ P Y++ LP++G Sbjct: 347 PEVHIGASGHK-ARNCGAFKHQQRNGQHGWQAAVLDDLIPPRYVWHLPESG 396 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,535,567 Number of extensions: 658036 Number of successful extensions: 2035 Number of sequences better than 10.0: 12 Number of HSP's gapped: 2034 Number of HSP's successfully gapped: 12 Length of query: 327 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 226 Effective length of database: 11,355,714 Effective search space: 2566391364 Effective search space used: 2566391364 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
