ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31a11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P77694:YAGW_ECOLI Uncharacterized protein yagW - Escherichia coli 35 2.0

>P77694:YAGW_ECOLI Uncharacterized protein yagW - Escherichia coli|
          Length = 547
 Score = 34.7 bits (78), Expect = 2.0
 Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +3

Query: 2034 GRICSGLFSLDIGYIPFTSGIEAVIEVFAKVDGPHHVRFG----AFSSGFDHEIVLFDDT 2201
            G + SG  +LD GYI  TSG  A  EV  KV GP  V  G     FSS      V F  T
Sbjct: 399  GYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPAT 458

Query: 2202 FS 2207
             S
Sbjct: 459  LS 460


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 465,151,882
Number of extensions: 10542477
Number of successful extensions: 22476
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22465
Number of HSP's successfully gapped: 1
Length of query: 864
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 742
Effective length of database: 67,222,449
Effective search space: 49879057158
Effective search space used: 49879057158
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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