ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf31a11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 1852 aaattgtaggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 ||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 23020135 aaattgtaggattccttcacattacctctttgcagcccttgtcgaggaatgta 23020083 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 1852 aaattgtaggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 ||||| |||||| |||||| |||||||||| |||||||||||||||||||| Sbjct: 23010145 aaattataggatcccttcacattacctctttgcagcccttgtcgaggaatgta 23010093 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Minus Query: 2157 ttcagcagtggctttgatcatgagattgtgttgtttgatgaca 2199 |||||||| ||||||||||||||||| ||||||| ||||||| Sbjct: 23080054 ttcagcagcggctttgatcatgagatcgtgttgtacgatgaca 23080012 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Minus Query: 1874 tacctctttgtagcccttgtcgaggaatgta 1904 ||||||||||||||||||| ||||||||||| Sbjct: 23080350 tacctctttgtagcccttgccgaggaatgta 23080320 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 caggaggtggtggcggcggcagaggaggag 252 ||||||| |||||||||||| ||||||||| Sbjct: 8985788 caggaggcggtggcggcggcggaggaggag 8985817
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 1852 aaattgtaggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 ||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 90541 aaattgtaggattccttcacattacctctttgcagcccttgtcgaggaatgta 90489 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Minus Query: 1852 aaattgtaggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 ||||| |||||| |||||| |||||||||| |||||||||||||||||||| Sbjct: 80551 aaattataggatcccttcacattacctctttgcagcccttgtcgaggaatgta 80499
>ref|NM_001049983.1| Oryza sativa (japonica cultivar-group) Os01g0590200 (Os01g0590200) mRNA, partial cds Length = 1661 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1859 aggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 |||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 814 aggattccttcacattacctctttgcagcccttgtcgaggaatgta 859
>dbj|AK105022.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G09, full insert sequence Length = 1644 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1859 aggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 |||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 809 aggattccttcacattacctctttgcagcccttgtcgaggaatgta 854
>dbj|AK099235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105L12, full insert sequence Length = 1637 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1859 aggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 |||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 802 aggattccttcacattacctctttgcagcccttgtcgaggaatgta 847
>dbj|AK063416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-B09, full insert sequence Length = 1661 Score = 60.0 bits (30), Expect = 4e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1859 aggattccttcatcctacctctttgtagcccttgtcgaggaatgta 1904 |||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 814 aggattccttcacattacctctttgcagcccttgtcgaggaatgta 859
>ref|NM_001049986.1| Oryza sativa (japonica cultivar-group) Os01g0590800 (Os01g0590800) mRNA, complete cds Length = 1464 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Plus Query: 2157 ttcagcagtggctttgatcatgagattgtgttgtttgatgaca 2199 |||||||| ||||||||||||||||| ||||||| ||||||| Sbjct: 997 ttcagcagcggctttgatcatgagatcgtgttgtacgatgaca 1039
>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710A02 Length = 157201 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Minus Query: 2157 ttcagcagtggctttgatcatgagattgtgttgtttgatgaca 2199 |||||||| ||||||||||||||||| ||||||| ||||||| Sbjct: 12213 ttcagcagcggctttgatcatgagatcgtgttgtacgatgaca 12171 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Minus Query: 1874 tacctctttgtagcccttgtcgaggaatgta 1904 ||||||||||||||||||| ||||||||||| Sbjct: 12509 tacctctttgtagcccttgccgaggaatgta 12479
>emb|AL590362.12| Human DNA sequence from clone RP11-214G2 on chromosome 9 Contains a CpG island, complete sequence Length = 154698 Score = 50.1 bits (25), Expect = 0.041 Identities = 28/29 (96%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcagaggaggag 252 |||||| |||||||||||||||||||||| Sbjct: 137202 aggaggaggtggcggcggcagaggaggag 137174
>emb|AJ335168.1|HSA335168 Homo sapiens genomic sequence surrounding NotI site, clone NR1-AJ17R Length = 723 Score = 50.1 bits (25), Expect = 0.041 Identities = 28/29 (96%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcagaggaggag 252 |||||| |||||||||||||||||||||| Sbjct: 169 aggaggaggtggcggcggcagaggaggag 141
>emb|AJ335419.1|HSA335419 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BO19R Length = 742 Score = 50.1 bits (25), Expect = 0.041 Identities = 28/29 (96%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcagaggaggag 252 |||||| |||||||||||||||||||||| Sbjct: 169 aggaggaggtggcggcggcagaggaggag 141
>ref|NM_001052887.1| Oryza sativa (japonica cultivar-group) Os02g0227400 (Os02g0227400) mRNA, complete cds Length = 3059 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggagaag 255 ||||||||||||||| |||||||||||| Sbjct: 122 ggtggtggcggcggcggaggaggagaag 95
>gb|AY517520.1| Paraurostyla weissei eukaryotic release factor 1 (eRF1) gene, complete cds; macronuclear Length = 1627 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2395 agaacttgccaccacagaaataaatgaa 2422 |||||||||||||||||||||| ||||| Sbjct: 569 agaacttgccaccacagaaatacatgaa 542
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggagaag 255 ||||||||||||||| |||||||||||| Sbjct: 7143766 ggtggtggcggcggcggaggaggagaag 7143739
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggagaag 255 ||||||||||||||| |||||||||||| Sbjct: 147185 ggtggtggcggcggcggaggaggagaag 147158
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggagaag 255 ||||||||||||||| |||||||||||| Sbjct: 43703 ggtggtggcggcggcggaggaggagaag 43676
>dbj|AK103143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120H04, full insert sequence Length = 3069 Score = 48.1 bits (24), Expect = 0.16 Identities = 27/28 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggagaag 255 ||||||||||||||| |||||||||||| Sbjct: 124 ggtggtggcggcggcggaggaggagaag 97
>emb|AM392716.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (TSPYL2 gene), clone DKFZp761J057.1E1 Length = 2121 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 572 gagcagcaggaggcggcggcggcggcggaggagga 606
>ref|XM_001128695.1| PREDICTED: Homo sapiens TSPY-like 2 (TSPYL2), mRNA Length = 2689 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 558 gagcagcaggaggcggcggcggcggcggaggagga 592
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 395 acttggccgacttggccggcttg 417 ||||||||||||||||||||||| Sbjct: 25352868 acttggccgacttggccggcttg 25352846
>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence Length = 193784 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 cagcaggaggtggtggcggcggc 242 ||||||||||||||||||||||| Sbjct: 54189 cagcaggaggtggtggcggcggc 54211
>dbj|AK131220.1| Homo sapiens cDNA FLJ16115 fis, clone ADRGL2000042, highly similar to Homo sapiens CTCL tumor antigen se20-4 mRNA Length = 2607 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 684 gagcagcaggaggcggcggcggcggcggaggagga 718
>dbj|AK134654.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330514E21 product:ral guanine nucleotide dissociation stimulator-like 3, full insert sequence Length = 3365 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 cagcaggaggtggtggcggcggc 242 ||||||||||||||||||||||| Sbjct: 411 cagcaggaggtggtggcggcggc 389
>gb|BC024270.1| Homo sapiens TSPY-like 2, mRNA (cDNA clone MGC:39136 IMAGE:2819684), complete cds Length = 2825 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 671 gagcagcaggaggcggcggcggcggcggaggagga 705
>dbj|AK165746.1| Mus musculus adult male gall bladder cDNA, RIKEN full-length enriched library, clone:G630048A03 product:ral guanine nucleotide dissociation stimulator-like 3, full insert sequence Length = 3192 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 cagcaggaggtggtggcggcggc 242 ||||||||||||||||||||||| Sbjct: 422 cagcaggaggtggtggcggcggc 400
>dbj|AK165023.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130305F06 product:ral guanine nucleotide dissociation stimulator-like 3, full insert sequence Length = 2938 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 cagcaggaggtggtggcggcggc 242 ||||||||||||||||||||||| Sbjct: 422 cagcaggaggtggtggcggcggc 400
>tpg|BK002910.1| TPA_inf: Drosophila melanogaster HDC16224 (HDC16224) gene, complete cds Length = 3008 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 395 acttggccgacttggccggcttg 417 ||||||||||||||||||||||| Sbjct: 230 acttggccgacttggccggcttg 208
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 46.1 bits (23), Expect = 0.64 Identities = 26/27 (96%) Strand = Plus / Plus Query: 226 gaggtggtggcggcggcagaggaggag 252 ||||||| ||||||||||||||||||| Sbjct: 70142 gaggtggcggcggcggcagaggaggag 70168
>dbj|AK053550.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130107B16 product:RALGDS-RELATED EFFECTOR PROTEIN OF M-RAS, full insert sequence Length = 2537 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 cagcaggaggtggtggcggcggc 242 ||||||||||||||||||||||| Sbjct: 416 cagcaggaggtggtggcggcggc 394
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 46.1 bits (23), Expect = 0.64 Identities = 26/27 (96%) Strand = Plus / Minus Query: 226 gaggtggtggcggcggcagaggaggag 252 ||||||| ||||||||||||||||||| Sbjct: 19306239 gaggtggcggcggcggcagaggaggag 19306213 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gcggcggcagaggaggagaag 255 ||||||||||||||||||||| Sbjct: 5957391 gcggcggcagaggaggagaag 5957411
>emb|BX322635.6| Human DNA sequence from clone RP1-290F12 on chromosome X Contains the gene for super conserved receptor expressed in brain 3 (SREB3), the gene for cutaneous T-cell lymphoma-associated tumor antigen se20-4 (SE20-4) and two CpG islands, complete sequence Length = 66325 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 57146 gagcagcaggaggcggcggcggcggcggaggagga 57180
>gb|AY040871.1| Homo sapiens cell division autoantigen 1 nucleolar protein mRNA, complete cds Length = 2867 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 680 gagcagcaggaggcggcggcggcggcggaggagga 714
>ref|NM_023622.2| Mus musculus ral guanine nucleotide dissociation stimulator-like 3 (Rgl3), mRNA gb|AF239661.1|AF239661 Mus musculus RalGDS-related effector protein of M-Ras mRNA, complete cds Length = 2636 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 cagcaggaggtggtggcggcggc 242 ||||||||||||||||||||||| Sbjct: 430 cagcaggaggtggtggcggcggc 408
>gb|AC116482.11| Mus musculus chromosome 8, clone RP23-423D8, complete sequence Length = 202027 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 218 agcagcaggaggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||| ||| ||||||||| Sbjct: 39957 agcagcaggaggtggcggcggtggcggaggaggag 39991
>gb|AC007856.7|AC007856 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone BACR05L03, complete sequence Length = 175124 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 395 acttggccgacttggccggcttg 417 ||||||||||||||||||||||| Sbjct: 33349 acttggccgacttggccggcttg 33327
>gb|AF254794.1|AF254794 Homo sapiens differentially expressed nucleolar TGF-beta1 target protein (DENTT) mRNA, complete cds Length = 2569 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 430 gagcagcaggaggcggcggcggcggcggaggagga 464
>ref|NM_022117.1| Homo sapiens TSPY-like 2 (TSPYL2), mRNA gb|AF273046.1|AF273046 Homo sapiens CTCL tumor antigen se20-4 mRNA, complete cds Length = 2830 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 681 gagcagcaggaggcggcggcggcggcggaggagga 715
>emb|AL713652.1|HSM802979 Homo sapiens mRNA; cDNA DKFZp761J057 (from clone DKFZp761J057) Length = 2819 Score = 46.1 bits (23), Expect = 0.64 Identities = 32/35 (91%) Strand = Plus / Plus Query: 217 gagcagcaggaggtggtggcggcggcagaggagga 251 ||||||||||||| || ||||||||| |||||||| Sbjct: 670 gagcagcaggaggcggcggcggcggcggaggagga 704
>gb|AF237669.1|AF237669 Mus musculus RalGDS-like protein 3 mRNA, complete cds Length = 2230 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 220 cagcaggaggtggtggcggcggc 242 ||||||||||||||||||||||| Sbjct: 388 cagcaggaggtggtggcggcggc 366
>gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, region 99A7-99B5, BAC clones BACR48K01 and BACR48O23, complete sequence Length = 311043 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 395 acttggccgacttggccggcttg 417 ||||||||||||||||||||||| Sbjct: 242470 acttggccgacttggccggcttg 242448
>gb|CP000477.1| Methanosaeta thermophila PT, complete genome Length = 1879471 Score = 44.1 bits (22), Expect = 2.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 181 tatggccctgcgctccagcgcctcca 206 ||||||||||||||||||| |||||| Sbjct: 50478 tatggccctgcgctccagcacctcca 50503
>emb|CT831424.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN038D01, full insert sequence Length = 913 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 caggaggtggtggcggcggcagaggaggag 252 ||||||| |||||||||||| ||||||||| Sbjct: 306 caggaggcggtggcggcggcggaggaggag 335
>ref|NM_001049198.1| Oryza sativa (japonica cultivar-group) Os01g0264400 (Os01g0264400) mRNA, complete cds Length = 918 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 caggaggtggtggcggcggcagaggaggag 252 ||||||| |||||||||||| ||||||||| Sbjct: 309 caggaggcggtggcggcggcggaggaggag 338
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 gctgcccctcggcccctccccc 42 |||||||||||||||||||||| Sbjct: 205580 gctgcccctcggcccctccccc 205601
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 gctgcccctcggcccctccccc 42 |||||||||||||||||||||| Sbjct: 48571 gctgcccctcggcccctccccc 48592
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 caggaggtggtggcggcggcagaggaggag 252 ||||||| |||||||||||| ||||||||| Sbjct: 93543 caggaggcggtggcggcggcggaggaggag 93572
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 caggaggtggtggcggcggcagaggaggag 252 ||||||| |||||||||||| ||||||||| Sbjct: 14795 caggaggcggtggcggcggcggaggaggag 14824
>dbj|AK107988.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F03, full insert sequence Length = 918 Score = 44.1 bits (22), Expect = 2.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 223 caggaggtggtggcggcggcagaggaggag 252 ||||||| |||||||||||| ||||||||| Sbjct: 309 caggaggcggtggcggcggcggaggaggag 338
>emb|BX539308.3| Zebrafish DNA sequence from clone DKEYP-84C8 in linkage group 1, complete sequence Length = 176769 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1812 atctgaaagtgtagcatgttta 1833 |||||||||||||||||||||| Sbjct: 4480 atctgaaagtgtagcatgttta 4501
>emb|AJ329404.1|HSA329404 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DH21R Length = 721 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ggtggcggcggcagaggaggag 252 |||||||||||||||||||||| Sbjct: 162 ggtggcggcggcagaggaggag 141
>ref|XM_421352.2| PREDICTED: Gallus gallus poly(A) polymerase alpha (PAPOLA), mRNA Length = 3084 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 233 ggtggtggcggcggcggaggaggag 257
>dbj|AK242161.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075156C18, full insert sequence Length = 1525 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 127 ggtggtggcggcggcggaggaggag 103
>dbj|AK237137.1| Sus scrofa mRNA, clone:SPL010003E02, expressed in spleen Length = 1620 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ggcggcggcagaggaggagaa 254 ||||||||||||||||||||| Sbjct: 116 ggcggcggcagaggaggagaa 136
>dbj|AK237022.1| Sus scrofa mRNA, clone:PBL010078C01, expressed in periphral blood mononuclear cell Length = 1573 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ggcggcggcagaggaggagaa 254 ||||||||||||||||||||| Sbjct: 89 ggcggcggcagaggaggagaa 109
>dbj|AK239425.1| Sus scrofa mRNA, clone:THY010103B03, expressed in thymus Length = 1635 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ggcggcggcagaggaggagaa 254 ||||||||||||||||||||| Sbjct: 116 ggcggcggcagaggaggagaa 136
>dbj|AK238898.1| Sus scrofa mRNA, clone:THY010045A10, expressed in thymus Length = 1604 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ggcggcggcagaggaggagaa 254 ||||||||||||||||||||| Sbjct: 86 ggcggcggcagaggaggagaa 106
>dbj|AK231680.1| Sus scrofa mRNA, clone:LNG010007E10, expressed in lung Length = 1614 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ggcggcggcagaggaggagaa 254 ||||||||||||||||||||| Sbjct: 89 ggcggcggcagaggaggagaa 109
>ref|NM_001057165.1| Oryza sativa (japonica cultivar-group) Os03g0603800 (Os03g0603800) mRNA, complete cds Length = 1311 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 69 ggtggtggcggcggcggaggaggag 45
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 cttggccgacttggccggcttggcc 420 |||||||| |||||||||||||||| Sbjct: 1873957 cttggccggcttggccggcttggcc 1873981
>ref|XM_517245.2| PREDICTED: Pan troglodytes deoxycytidine kinase (DCK), mRNA Length = 2357 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tccctagctgcccctcggccc 35 ||||||||||||||||||||| Sbjct: 170 tccctagctgcccctcggccc 150
>gb|AC189586.1| Brassica rapa subsp. pekinensis clone KBrH012I05, complete sequence Length = 104698 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagagga 248 ||||||||||||||||||||| Sbjct: 71068 ggtggtggcggcggcagagga 71048
>gb|AC182677.2| Populus trichocarpa clone Pop1-29G16, complete sequence Length = 141948 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2169 tttgatcatgagattgtgttgtttg 2193 ||||||||||| ||||||||||||| Sbjct: 29945 tttgatcatgatattgtgttgtttg 29921
>gb|AC182720.2| Populus trichocarpa clone Pop1-91P4, complete sequence Length = 102325 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2169 tttgatcatgagattgtgttgtttg 2193 ||||||||||| ||||||||||||| Sbjct: 61893 tttgatcatgatattgtgttgtttg 61917
>gb|AC158956.6| Mus musculus chromosome 3, clone RP23-370F14, complete sequence Length = 174060 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2187 ttgtttgatgacacattctctgtga 2211 |||||||||||| |||||||||||| Sbjct: 143748 ttgtttgatgactcattctctgtga 143772
>gb|AC167684.2| Daphnia pulex clone JGIAZSN-5E16, complete sequence Length = 37583 Score = 42.1 bits (21), Expect = 9.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 aggaggtggtggcggcggcagaggaggag 252 |||||| | |||||||||||||||||||| Sbjct: 25102 aggaggcgctggcggcggcagaggaggag 25130
>ref|NM_001007758.1| Rattus norvegicus nuclear fragile X mental retardation protein interacting protein 1 (Nufip1), mRNA gb|BC082111.1| Rattus norvegicus nuclear fragile X mental retardation protein interacting protein 1, mRNA (cDNA clone MGC:95323 IMAGE:7135272), complete cds Length = 1671 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 135 aggaggtggtggcggcggcag 115
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 32019 ggtggtggcggcggcggaggaggag 31995
>gb|AC134406.14| Mus musculus chromosome 9, clone RP24-349J23, complete sequence Length = 192663 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 gagggggagggagtggtgaca 456 ||||||||||||||||||||| Sbjct: 65607 gagggggagggagtggtgaca 65587
>ref|XM_533950.2| PREDICTED: Canis familiaris similar to Death-associated protein kinase 3 (DAP kinase 3) (DAP-like kinase) (Dlk) (ZIP-kinase) (LOC476745), mRNA Length = 1365 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 gaggtggtggcggcggcagaggagg 250 |||| |||||||||||||||||||| Sbjct: 988 gaggaggtggcggcggcagaggagg 1012
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2177 tgagattgtgttgtttgatga 2197 ||||||||||||||||||||| Sbjct: 148149 tgagattgtgttgtttgatga 148169
>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete sequence Length = 180645 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 110268 aggaggtggtggcggcggcag 110288
>ref|NM_146155.2| Mus musculus AT hook, DNA binding motif, containing 1 (Ahdc1), mRNA gb|BC042621.1| Mus musculus AT hook, DNA binding motif, containing 1, mRNA (cDNA clone MGC:30523 IMAGE:4911638), complete cds Length = 5729 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 1947 aggaggtggtggcggcggcag 1927
>gb|AC119815.9| Mus musculus chromosome 3, clone RP23-53G15, complete sequence Length = 175386 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2187 ttgtttgatgacacattctctgtga 2211 |||||||||||| |||||||||||| Sbjct: 125979 ttgtttgatgactcattctctgtga 125955
>gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, complete sequence Length = 200968 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tccctagctgcccctcggccc 35 ||||||||||||||||||||| Sbjct: 11629 tccctagctgcccctcggccc 11609
>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence Length = 226160 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 aggtggtggcggcggcagagg 247 ||||||||||||||||||||| Sbjct: 123815 aggtggtggcggcggcagagg 123835
>gb|AC161589.2| Mus musculus BAC clone RP24-383M20 from chromosome 9, complete sequence Length = 226186 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 aggtggtggcggcggcagagg 247 ||||||||||||||||||||| Sbjct: 28957 aggtggtggcggcggcagagg 28937
>gb|BC020364.1| Mus musculus nuclear fragile X mental retardation protein interacting protein 1, mRNA (cDNA clone IMAGE:3498427) Length = 1683 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 149 aggaggtggtggcggcggcag 129
>gb|BC056192.1| Mus musculus nuclear fragile X mental retardation protein interacting protein 1, mRNA (cDNA clone MGC:60533 IMAGE:30024494), complete cds Length = 1719 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 160 aggaggtggtggcggcggcag 140
>dbj|AK138912.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530001K12 product:unclassifiable, full insert sequence Length = 1248 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2177 tgagattgtgttgtttgatga 2197 ||||||||||||||||||||| Sbjct: 127 tgagattgtgttgtttgatga 107
>dbj|AK156205.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830011N04 product:nuclear fragile X mental retardation protein interacting protein, full insert sequence Length = 1668 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 161 aggaggtggtggcggcggcag 141
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcggcggcagaggaggagaag 255 ||||||||||||||||||||| Sbjct: 108922 gcggcggcagaggaggagaag 108902
>dbj|AK009260.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310009P07 product:nuclear fragile X mental retardation protein interacting protein, full insert sequence Length = 767 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 150 aggaggtggtggcggcggcag 130
>ref|NM_013745.2| Mus musculus nuclear fragile X mental retardation protein interacting protein 1 (Nufip1), mRNA dbj|AK032324.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430520A04 product:nuclear fragile X mental retardation protein interacting protein, full insert sequence Length = 3974 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 175 aggaggtggtggcggcggcag 155
>gb|AC074321.10| Homo sapiens chromosome 10 clone RP11-122F14, complete sequence Length = 177203 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 121371 aggaggtggtggcggcggcag 121391
>gb|AC007068.17| Homo sapiens 12p BAC RPCI11-75L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178607 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1158 ggccatttaactgaaattatc 1178 ||||||||||||||||||||| Sbjct: 135336 ggccatttaactgaaattatc 135316
>emb|CR954189.2| Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE Length = 110556 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ggtggtggcggcggcagagga 248 ||||||||||||||||||||| Sbjct: 8175 ggtggtggcggcggcagagga 8195
>gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complete sequence Length = 165247 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1804 gctaatgtatctgaaagtgta 1824 ||||||||||||||||||||| Sbjct: 28328 gctaatgtatctgaaagtgta 28308
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 16620438 ggtggtggcggcggcggaggaggag 16620414
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 22429801 ggtggtggcggcggcggaggaggag 22429777
>gb|AC104690.2| Homo sapiens BAC clone RP11-183P23 from 4, complete sequence Length = 126700 Score = 42.1 bits (21), Expect = 9.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 216 cgagcagcaggaggtggtggcggcggcag 244 |||| |||||||||||| ||||||||||| Sbjct: 53332 cgaggagcaggaggtggcggcggcggcag 53360
>gb|AC020556.7| Homo sapiens BAC clone RP11-507B10 from 4, complete sequence Length = 186092 Score = 42.1 bits (21), Expect = 9.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcagaggaggag 252 |||||| || ||||||||||||||||||| Sbjct: 85993 aggaggaggaggcggcggcagaggaggag 85965
>emb|AL445431.16| Human DNA sequence from clone RP11-365J16 on chromosome 10 Contains the 5' end of the DNAJC1 gene for DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJL1) and a CpG island, complete sequence Length = 138653 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1278 ctacatagcaacatggaaaat 1298 ||||||||||||||||||||| Sbjct: 81494 ctacatagcaacatggaaaat 81474
>ref|NM_001006918.1| Xenopus tropicalis splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) (sfrs1), mRNA gb|BC075558.1| Xenopus tropicalis splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor), mRNA (cDNA clone MGC:89508 IMAGE:6992553), complete cds Length = 2055 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 558 ggtggtggcggcggcggaggaggag 582
>gb|AC113889.6| Rattus norvegicus 2 BAC CH230-337K18 (Children's Hospital Oakland Research Institute) complete sequence Length = 148510 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1981 tttctgcgtatactgagattgagag 2005 |||||| |||||||||||||||||| Sbjct: 8846 tttctgtgtatactgagattgagag 8870
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 216 cgagcagcaggaggtggtggcggcg 240 |||||||| |||||||||||||||| Sbjct: 2765084 cgagcagccggaggtggtggcggcg 2765060
>emb|CR925992.1| Pongo pygmaeus mRNA; cDNA DKFZp459H0520 (from clone DKFZp459H0520) Length = 1946 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 agcaggaggtggtggcggcgg 241 ||||||||||||||||||||| Sbjct: 24 agcaggaggtggtggcggcgg 44
>gb|AC156450.2| Volvox carteri clone JGIAOBO-41M18, complete sequence Length = 36468 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcaggaggtggtggcggcggc 242 ||||||||||||||||||||| Sbjct: 5280 gcaggaggtggtggcggcggc 5260
>emb|AJ721094.1| Gallus gallus partial mRNA for hypothetical protein, clone 34p17 Length = 592 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 221 ggtggtggcggcggcggaggaggag 245
>gb|AC055818.9|AC055818 Mus musculus, clone RP23-129C12, complete sequence Length = 237678 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 gagggggagggagtggtgaca 456 ||||||||||||||||||||| Sbjct: 12538 gagggggagggagtggtgaca 12558
>gb|AY967523.1| Schmidtea mediterranea clone HE.3.07D mRNA sequence Length = 876 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2242 tgaaagcaaatgaaaaattgg 2262 ||||||||||||||||||||| Sbjct: 342 tgaaagcaaatgaaaaattgg 322
>gb|AF260316.1|AF260316 Homo sapiens deoxycytidine kinase (DCK) gene, promoter region and partial cds Length = 1635 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tccctagctgcccctcggccc 35 ||||||||||||||||||||| Sbjct: 1408 tccctagctgcccctcggccc 1388
>emb|BX927282.4| Zebrafish DNA sequence from clone DKEY-49O11 in linkage group 5, complete sequence Length = 204699 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1685 atgcatgtcttgcatttcaacacaa 1709 |||||| |||||||||||||||||| Sbjct: 92710 atgcatttcttgcatttcaacacaa 92734
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 92262 ggtggtggcggcggcggaggaggag 92238
>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16, complete sequence Length = 201353 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 gaggtggtggcggcggcagaggagg 250 ||||||||||||||||||| ||||| Sbjct: 179133 gaggtggtggcggcggcagcggagg 179157
>emb|BX934124.1| Gallus gallus finished cDNA, clone ChEST29o12 Length = 937 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 ggtggtggcggcggcagaggaggag 252 ||||||||||||||| ||||||||| Sbjct: 5 ggtggtggcggcggcggaggaggag 29
>ref|XM_566126.1| Anopheles gambiae str. PEST ENSANGP00000026681 (ENSANGG00000023388), partial mRNA Length = 1320 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 ggtggtggcggcggcagaggaggag 252 |||||||||||||||||||| |||| Sbjct: 1164 ggtggtggcggcggcagaggcggag 1188
>gb|AF159549.1|AF159549 Mus musculus nuclear FMRP interacting protein 1 (Nufip1) mRNA, complete cds Length = 1657 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aggaggtggtggcggcggcag 244 ||||||||||||||||||||| Sbjct: 132 aggaggtggtggcggcggcag 112
>gb|AF129458.1|AF129458 Chlamydomonas reinhardtii class II DNA photolyase (PHR2) gene, complete cds Length = 8203 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 gccgacttggccggcttggcc 420 ||||||||||||||||||||| Sbjct: 7201 gccgacttggccggcttggcc 7181
>gb|AY610083.1| Sus scrofa clone Clu_6686.scr.msk.p1.Contig1, mRNA sequence Length = 1542 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ggcggcggcagaggaggagaa 254 ||||||||||||||||||||| Sbjct: 31 ggcggcggcagaggaggagaa 51
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence Length = 210916 Score = 42.1 bits (21), Expect = 9.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1559 tgaaatacatgttaactatactttg 1583 |||||||||||||||||||| |||| Sbjct: 61150 tgaaatacatgttaactatagtttg 61126
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 gaggtggtggcggcggcagag 246 ||||||||||||||||||||| Sbjct: 2524157 gaggtggtggcggcggcagag 2524177
>emb|AL929271.4| Zebrafish DNA sequence from clone CH211-278C13 in linkage group 17, complete sequence Length = 89488 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2554 ttgaaaatattctatgtttgt 2574 ||||||||||||||||||||| Sbjct: 80441 ttgaaaatattctatgtttgt 80421
>emb|AL808116.6| Mouse DNA sequence from clone RP23-97H1 on chromosome X, complete sequence Length = 200519 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1846 gttgtcaaattgtaggattcc 1866 ||||||||||||||||||||| Sbjct: 38913 gttgtcaaattgtaggattcc 38893
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1616 tttggaacagttataaaagtt 1636 ||||||||||||||||||||| Sbjct: 79227 tttggaacagttataaaagtt 79207
>gb|L07485.1|HUMDOCPPT Homo sapiens deoxycytidine kinase gene, promoter region Length = 698 Score = 42.1 bits (21), Expect = 9.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tccctagctgcccctcggccc 35 ||||||||||||||||||||| Sbjct: 321 tccctagctgcccctcggccc 301 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 455,395,288 Number of extensions: 24013533 Number of successful extensions: 134263 Number of sequences better than 10.0: 115 Number of HSP's gapped: 134262 Number of HSP's successfully gapped: 122 Length of query: 2592 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2569 Effective length of database: 18,503,978,556 Effective search space: 47536720910364 Effective search space used: 47536720910364 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
