ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051758.1| Oryza sativa (japonica cultivar-group) Os01g0921000 (Os01g0921000) mRNA, complete cds Length = 1333 Score = 208 bits (105), Expect = 4e-50 Identities = 296/357 (82%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 |||||||| || ||||| ||||||||| |||||| | ||| ||| |||||||||||||| Sbjct: 274 ttcccgggcttgccggagttgctgccgaaggtggcgatggaggacaggacggtgatcatc 333 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 ||||||||||||||||||||| || |||||| |||||||||||||||| |||||| | Sbjct: 334 acgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacctctaccgcgacagc 393 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||||||||||| ||||| ||||| ||||||||| |||| |||| |||||||||||||| Sbjct: 394 ttcaagaacggcgaggggatcgcccacctcctcgaccatgtcctcgtcgtcgccgtcgac 453 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcgaggtcac 541 ||| || ||| || | |||| ||||||| ||||| ||||||||||||||| | |||| Sbjct: 454 cccgccg-gcttccgccgctgcaaggccgtccacccccactgctacctcctccacgtcaa 512 Query: 542 cgccgccgacgtcagctccgccaaccgcttcatgaccaagagctacctggagctcgtgtg 601 || | || ||| |||||||| |||||||||| ||| | ||||| |||||||| || Sbjct: 513 gtccatcaacctcacctccgccacccgcttcatgtccagggagtacctcgagctcgtctg 572 Query: 602 ggccaagctggagctccagcagcgcgtcctccagctcggctacagctacctcttcac 658 | ||||||| |||||||||||||||||| |||||||||||| || ||||||||| Sbjct: 573 gaccaagctctccctccagcagcgcgtcctcgagctcggctacaacttcctcttcac 629 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 ||||||||||||| |||||||| |||| ||||| | ||||||||||||||||| || | Sbjct: 963 caccatgcacgccgactgctgcgtcggcctcgacaccaaggtgcacgacctcaccgacat 1022 Query: 1055 cgccgccgactggaagaactacacgagcatggcgccgccggagagga 1101 ||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 1023 cgccgccgactggaagaactacacgggcatgtcgccggaggagagga 1069 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggt 196 ||||||||||||||||| |||||| |||| Sbjct: 121 ctgctcttcttcctcgcgtccgacagggt 149
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 208 bits (105), Expect = 4e-50 Identities = 296/357 (82%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 |||||||| || ||||| ||||||||| |||||| | ||| ||| |||||||||||||| Sbjct: 40205206 ttcccgggcttgccggagttgctgccgaaggtggcgatggaggacaggacggtgatcatc 40205265 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 ||||||||||||||||||||| || |||||| |||||||||||||||| |||||| | Sbjct: 40205266 acgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacctctaccgcgacagc 40205325 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||||||||||| ||||| ||||| ||||||||| |||| |||| |||||||||||||| Sbjct: 40205326 ttcaagaacggcgaggggatcgcccacctcctcgaccatgtcctcgtcgtcgccgtcgac 40205385 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcgaggtcac 541 ||| || ||| || | |||| ||||||| ||||| ||||||||||||||| | |||| Sbjct: 40205386 cccgccg-gcttccgccgctgcaaggccgtccacccccactgctacctcctccacgtcaa 40205444 Query: 542 cgccgccgacgtcagctccgccaaccgcttcatgaccaagagctacctggagctcgtgtg 601 || | || ||| |||||||| |||||||||| ||| | ||||| |||||||| || Sbjct: 40205445 gtccatcaacctcacctccgccacccgcttcatgtccagggagtacctcgagctcgtctg 40205504 Query: 602 ggccaagctggagctccagcagcgcgtcctccagctcggctacagctacctcttcac 658 | ||||||| |||||||||||||||||| |||||||||||| || ||||||||| Sbjct: 40205505 gaccaagctctccctccagcagcgcgtcctcgagctcggctacaacttcctcttcac 40205561 Score = 186 bits (94), Expect = 1e-43 Identities = 201/234 (85%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 ||||| || |||||||||||||||||| |||||||| ||| ||| ||||||||||||| Sbjct: 40199620 ttccccggcctggcggagctgctgccggaggtggccatggaggacaagacggtgatcatc 40199679 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 |||||||||||||| |||||| || ||||||||||||||||||||||||||| || | Sbjct: 40199680 acgtcggtgaacgacgcgtgggcggcgccgggctccctcctcgacctcttccgtgacagc 40199739 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||| | ||||| || |||||||| ||||||||| ||||| |||| |||||||||||||| Sbjct: 40199740 ttccacaacggcgacggcatcgcccacctcctcgaccacgtcctcgtcgtcgccgtcgac 40199799 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcga 535 ||||||| ||| || | |||| ||||||| ||||| ||||||||||||||||| Sbjct: 40199800 gccggcg-gcttccgccgctgcaaggccgtccacccccactgctacctcctcga 40199852 Score = 113 bits (57), Expect = 2e-21 Identities = 270/341 (79%) Strand = Plus / Plus Query: 318 gagctgctgccgagggtggccacggacgacgggacggtgatcatcacgtcggtgaacgag 377 ||||| ||||| | |||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 40195818 gagcttctgcccaaggtggcaaccgacgacaggacggtgatcatcacgtcggtgaacgag 40195877 Query: 378 gcgtggtcgcggccgggctccctcctcgacctcttccgcgaggggttcaagaacggggag 437 |||| ||||||| ||||||||||| ||||||||||||| | ||| ||| ||| Sbjct: 40195878 gcgttcgcgcggccaaactccctcctcgtcctcttccgcgagagcttcgccgccggcgag 40195937 Query: 438 ggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgacgccggcgcgctggcg 497 ||||| ||||||||| ||||| |||| |||||||||||||| ||| |||| | Sbjct: 40195938 aagatcgcccacctcctcgaccacgtcctcgtcgtcgccgtcgaccccgccgcgttccac 40195997 Query: 498 cactgcgaggccgtgcacccgcactgctacctcctcgaggtcaccgccgccgacgtcagc 557 |||||| || |||||||| |||||||||| |||| |||| | || || ||||| Sbjct: 40195998 cactgccgcgctgtgcaccctcactgctaccacctcaaggtggacaccatgaacctcagc 40196057 Query: 558 tccgccaaccgcttcatgaccaagagctacctggagctcgtgtgggccaagctggagctc 617 || |||||| |||||||| | || |||| | |||||||| ||| ||||||| ||| Sbjct: 40196058 tcggccaacaacttcatgagcgaggcctacgtcgagctcgtctggaccaagctctccctc 40196117 Query: 618 cagcagcgcgtcctccagctcggctacagctacctcttcac 658 ||||| ||||||||| |||||||||||| || ||||||||| Sbjct: 40196118 cagcaacgcgtcctcgagctcggctacaacttcctcttcac 40196158 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 988 gggtgtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctca 1047 |||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||| Sbjct: 40199910 gggtgtgcacggtgcacgccaactgctgcgtcgggctggagaacaaggtgctcgacctca 40199969 Query: 1048 ggaacgtcgccgccgactggaagaactacacg 1079 |||||| |||||||||||||||||||||| Sbjct: 40199970 agaacgtgctcgccgactggaagaactacacg 40200001 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 ||||||||||||| |||||||| |||| ||||| | ||||||||||||||||| || | Sbjct: 40206370 caccatgcacgccgactgctgcgtcggcctcgacaccaaggtgcacgacctcaccgacat 40206429 Query: 1055 cgccgccgactggaagaactacacgagcatggcgccgccggagagga 1101 ||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 40206430 cgccgccgactggaagaactacacgggcatgtcgccggaggagagga 40206476 Score = 81.8 bits (41), Expect = 6e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggtcggcgagcggctggccagcatctccagcttg 227 ||||||||||||||||||||||||||||| ||||||||||| ||| ||| || |||||| Sbjct: 40198470 ctgctcttcttcctcgcctccgaccgggtgagcgagcggctgcccaccatatcgagcttg 40198529 Query: 228 ggcaa 232 ||||| Sbjct: 40198530 ggcaa 40198534 Score = 79.8 bits (40), Expect = 2e-11 Identities = 109/132 (82%) Strand = Plus / Plus Query: 737 gttcaacggcgacgccgaggccctgaccaacgcgcccaacacgggcttctactacgtcag 796 |||||||||||| | ||| | ||||| |||| ||||||||| || |||||| |||| | Sbjct: 40196497 gttcaacggcgatggcgacgacctgagcaactggcccaacaccgggttctaccacgtgaa 40196556 Query: 797 gtccaccaaccgcacggtggagatgctgcgcaggtggcgggcggcgaggtcgcggttccc 856 ||| || ||||| || |||||||||||||| |||||||||||||| || || ||| ||| Sbjct: 40196557 gtcgacgaaccggacagtggagatgctgcggcggtggcgggcggcgcgggcgaggtaccc 40196616 Query: 857 gccgacccacga 868 ||||| |||||| Sbjct: 40196617 gccgaaccacga 40196628 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggtcggcgagcggctggc 211 |||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 40201303 ctgctcttcttcctcgcctccgacagggtgggcgagcagctggc 40201346 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1011 tgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 |||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 40209536 tgctgcatcgggctggagaacaagctgcacgacctgaggaacgt 40209579 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ggacggtgatcatcacgtcggtgaacgaggcgtgg 383 ||||||||||||| ||||||||||||||||||||| Sbjct: 40208741 ggacggtgatcatgacgtcggtgaacgaggcgtgg 40208775 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 572 catgaccaagagctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcct 631 |||||||||| |||||| || ||||| ||| |||||| |||| |||||||||||||| Sbjct: 40208970 catgaccaaggactacctcgacctcgtctggagcaagctcaagctgcagcagcgcgtcct 40209029 Query: 632 ccagctcggctacagctacctcttcac 658 | |||||||||||| | ||||||||| Sbjct: 40209030 cgagctcggctacaacctcctcttcac 40209056 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcg 1026 ||||||||||||||||||||||||| |||| |||| Sbjct: 40196752 gtgcaccatgcacgccaactgctgcgtcggcctcg 40196786 Score = 50.1 bits (25), Expect = 0.020 Identities = 58/69 (84%) Strand = Plus / Plus Query: 357 atcatcacgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgc 416 ||||| ||||||||||||||||||||| || |||||| || || || ||||| |||| Sbjct: 40186686 atcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgctggacctgttcctg 40186745 Query: 417 gaggggttc 425 ||||||||| Sbjct: 40186746 gaggggttc 40186754 Score = 48.1 bits (24), Expect = 0.079 Identities = 30/32 (93%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcg 1026 |||||||||||||||||||||| |||| |||| Sbjct: 40187827 caccatgcacgccaactgctgcgtcggcctcg 40187858 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 cgtgcacccgcactgctacctcctcg 534 |||||||||||||||||||| ||||| Sbjct: 40186838 cgtgcacccgcactgctaccgcctcg 40186863 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggt 196 ||||||||||||||||| |||||| |||| Sbjct: 40204576 ctgctcttcttcctcgcgtccgacagggt 40204604
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 208 bits (105), Expect = 4e-50 Identities = 296/357 (82%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 |||||||| || ||||| ||||||||| |||||| | ||| ||| |||||||||||||| Sbjct: 148290 ttcccgggcttgccggagttgctgccgaaggtggcgatggaggacaggacggtgatcatc 148349 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 ||||||||||||||||||||| || |||||| |||||||||||||||| |||||| | Sbjct: 148350 acgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacctctaccgcgacagc 148409 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||||||||||| ||||| ||||| ||||||||| |||| |||| |||||||||||||| Sbjct: 148410 ttcaagaacggcgaggggatcgcccacctcctcgaccatgtcctcgtcgtcgccgtcgac 148469 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcgaggtcac 541 ||| || ||| || | |||| ||||||| ||||| ||||||||||||||| | |||| Sbjct: 148470 cccgccg-gcttccgccgctgcaaggccgtccacccccactgctacctcctccacgtcaa 148528 Query: 542 cgccgccgacgtcagctccgccaaccgcttcatgaccaagagctacctggagctcgtgtg 601 || | || ||| |||||||| |||||||||| ||| | ||||| |||||||| || Sbjct: 148529 gtccatcaacctcacctccgccacccgcttcatgtccagggagtacctcgagctcgtctg 148588 Query: 602 ggccaagctggagctccagcagcgcgtcctccagctcggctacagctacctcttcac 658 | ||||||| |||||||||||||||||| |||||||||||| || ||||||||| Sbjct: 148589 gaccaagctctccctccagcagcgcgtcctcgagctcggctacaacttcctcttcac 148645 Score = 186 bits (94), Expect = 1e-43 Identities = 201/234 (85%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 ||||| || |||||||||||||||||| |||||||| ||| ||| ||||||||||||| Sbjct: 142704 ttccccggcctggcggagctgctgccggaggtggccatggaggacaagacggtgatcatc 142763 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 |||||||||||||| |||||| || ||||||||||||||||||||||||||| || | Sbjct: 142764 acgtcggtgaacgacgcgtgggcggcgccgggctccctcctcgacctcttccgtgacagc 142823 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||| | ||||| || |||||||| ||||||||| ||||| |||| |||||||||||||| Sbjct: 142824 ttccacaacggcgacggcatcgcccacctcctcgaccacgtcctcgtcgtcgccgtcgac 142883 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcga 535 ||||||| ||| || | |||| ||||||| ||||| ||||||||||||||||| Sbjct: 142884 gccggcg-gcttccgccgctgcaaggccgtccacccccactgctacctcctcga 142936 Score = 113 bits (57), Expect = 2e-21 Identities = 270/341 (79%) Strand = Plus / Plus Query: 318 gagctgctgccgagggtggccacggacgacgggacggtgatcatcacgtcggtgaacgag 377 ||||| ||||| | |||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 138902 gagcttctgcccaaggtggcaaccgacgacaggacggtgatcatcacgtcggtgaacgag 138961 Query: 378 gcgtggtcgcggccgggctccctcctcgacctcttccgcgaggggttcaagaacggggag 437 |||| ||||||| ||||||||||| ||||||||||||| | ||| ||| ||| Sbjct: 138962 gcgttcgcgcggccaaactccctcctcgtcctcttccgcgagagcttcgccgccggcgag 139021 Query: 438 ggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgacgccggcgcgctggcg 497 ||||| ||||||||| ||||| |||| |||||||||||||| ||| |||| | Sbjct: 139022 aagatcgcccacctcctcgaccacgtcctcgtcgtcgccgtcgaccccgccgcgttccac 139081 Query: 498 cactgcgaggccgtgcacccgcactgctacctcctcgaggtcaccgccgccgacgtcagc 557 |||||| || |||||||| |||||||||| |||| |||| | || || ||||| Sbjct: 139082 cactgccgcgctgtgcaccctcactgctaccacctcaaggtggacaccatgaacctcagc 139141 Query: 558 tccgccaaccgcttcatgaccaagagctacctggagctcgtgtgggccaagctggagctc 617 || |||||| |||||||| | || |||| | |||||||| ||| ||||||| ||| Sbjct: 139142 tcggccaacaacttcatgagcgaggcctacgtcgagctcgtctggaccaagctctccctc 139201 Query: 618 cagcagcgcgtcctccagctcggctacagctacctcttcac 658 ||||| ||||||||| |||||||||||| || ||||||||| Sbjct: 139202 cagcaacgcgtcctcgagctcggctacaacttcctcttcac 139242 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 988 gggtgtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctca 1047 |||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||| Sbjct: 142994 gggtgtgcacggtgcacgccaactgctgcgtcgggctggagaacaaggtgctcgacctca 143053 Query: 1048 ggaacgtcgccgccgactggaagaactacacg 1079 |||||| |||||||||||||||||||||| Sbjct: 143054 agaacgtgctcgccgactggaagaactacacg 143085 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 ||||||||||||| |||||||| |||| ||||| | ||||||||||||||||| || | Sbjct: 149454 caccatgcacgccgactgctgcgtcggcctcgacaccaaggtgcacgacctcaccgacat 149513 Query: 1055 cgccgccgactggaagaactacacgagcatggcgccgccggagagga 1101 ||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 149514 cgccgccgactggaagaactacacgggcatgtcgccggaggagagga 149560 Score = 81.8 bits (41), Expect = 6e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggtcggcgagcggctggccagcatctccagcttg 227 ||||||||||||||||||||||||||||| ||||||||||| ||| ||| || |||||| Sbjct: 141554 ctgctcttcttcctcgcctccgaccgggtgagcgagcggctgcccaccatatcgagcttg 141613 Query: 228 ggcaa 232 ||||| Sbjct: 141614 ggcaa 141618 Score = 79.8 bits (40), Expect = 2e-11 Identities = 109/132 (82%) Strand = Plus / Plus Query: 737 gttcaacggcgacgccgaggccctgaccaacgcgcccaacacgggcttctactacgtcag 796 |||||||||||| | ||| | ||||| |||| ||||||||| || |||||| |||| | Sbjct: 139581 gttcaacggcgatggcgacgacctgagcaactggcccaacaccgggttctaccacgtgaa 139640 Query: 797 gtccaccaaccgcacggtggagatgctgcgcaggtggcgggcggcgaggtcgcggttccc 856 ||| || ||||| || |||||||||||||| |||||||||||||| || || ||| ||| Sbjct: 139641 gtcgacgaaccggacagtggagatgctgcggcggtggcgggcggcgcgggcgaggtaccc 139700 Query: 857 gccgacccacga 868 ||||| |||||| Sbjct: 139701 gccgaaccacga 139712 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggtcggcgagcggctggc 211 |||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 144387 ctgctcttcttcctcgcctccgacagggtgggcgagcagctggc 144430 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1011 tgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 |||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 152620 tgctgcatcgggctggagaacaagctgcacgacctgaggaacgt 152663 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ggacggtgatcatcacgtcggtgaacgaggcgtgg 383 ||||||||||||| ||||||||||||||||||||| Sbjct: 151825 ggacggtgatcatgacgtcggtgaacgaggcgtgg 151859 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 572 catgaccaagagctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcct 631 |||||||||| |||||| || ||||| ||| |||||| |||| |||||||||||||| Sbjct: 152054 catgaccaaggactacctcgacctcgtctggagcaagctcaagctgcagcagcgcgtcct 152113 Query: 632 ccagctcggctacagctacctcttcac 658 | |||||||||||| | ||||||||| Sbjct: 152114 cgagctcggctacaacctcctcttcac 152140 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcg 1026 ||||||||||||||||||||||||| |||| |||| Sbjct: 139836 gtgcaccatgcacgccaactgctgcgtcggcctcg 139870 Score = 50.1 bits (25), Expect = 0.020 Identities = 58/69 (84%) Strand = Plus / Plus Query: 357 atcatcacgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgc 416 ||||| ||||||||||||||||||||| || |||||| || || || ||||| |||| Sbjct: 129770 atcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgctggacctgttcctg 129829 Query: 417 gaggggttc 425 ||||||||| Sbjct: 129830 gaggggttc 129838 Score = 48.1 bits (24), Expect = 0.079 Identities = 30/32 (93%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcg 1026 |||||||||||||||||||||| |||| |||| Sbjct: 130911 caccatgcacgccaactgctgcgtcggcctcg 130942 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 cgtgcacccgcactgctacctcctcg 534 |||||||||||||||||||| ||||| Sbjct: 129922 cgtgcacccgcactgctaccgcctcg 129947 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggt 196 ||||||||||||||||| |||||| |||| Sbjct: 147660 ctgctcttcttcctcgcgtccgacagggt 147688
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 208 bits (105), Expect = 4e-50 Identities = 296/357 (82%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 |||||||| || ||||| ||||||||| |||||| | ||| ||| |||||||||||||| Sbjct: 70984 ttcccgggcttgccggagttgctgccgaaggtggcgatggaggacaggacggtgatcatc 71043 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 ||||||||||||||||||||| || |||||| |||||||||||||||| |||||| | Sbjct: 71044 acgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacctctaccgcgacagc 71103 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||||||||||| ||||| ||||| ||||||||| |||| |||| |||||||||||||| Sbjct: 71104 ttcaagaacggcgaggggatcgcccacctcctcgaccatgtcctcgtcgtcgccgtcgac 71163 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcgaggtcac 541 ||| || ||| || | |||| ||||||| ||||| ||||||||||||||| | |||| Sbjct: 71164 cccgccg-gcttccgccgctgcaaggccgtccacccccactgctacctcctccacgtcaa 71222 Query: 542 cgccgccgacgtcagctccgccaaccgcttcatgaccaagagctacctggagctcgtgtg 601 || | || ||| |||||||| |||||||||| ||| | ||||| |||||||| || Sbjct: 71223 gtccatcaacctcacctccgccacccgcttcatgtccagggagtacctcgagctcgtctg 71282 Query: 602 ggccaagctggagctccagcagcgcgtcctccagctcggctacagctacctcttcac 658 | ||||||| |||||||||||||||||| |||||||||||| || ||||||||| Sbjct: 71283 gaccaagctctccctccagcagcgcgtcctcgagctcggctacaacttcctcttcac 71339 Score = 186 bits (94), Expect = 1e-43 Identities = 201/234 (85%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 ||||| || |||||||||||||||||| |||||||| ||| ||| ||||||||||||| Sbjct: 65398 ttccccggcctggcggagctgctgccggaggtggccatggaggacaagacggtgatcatc 65457 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 |||||||||||||| |||||| || ||||||||||||||||||||||||||| || | Sbjct: 65458 acgtcggtgaacgacgcgtgggcggcgccgggctccctcctcgacctcttccgtgacagc 65517 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||| | ||||| || |||||||| ||||||||| ||||| |||| |||||||||||||| Sbjct: 65518 ttccacaacggcgacggcatcgcccacctcctcgaccacgtcctcgtcgtcgccgtcgac 65577 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcga 535 ||||||| ||| || | |||| ||||||| ||||| ||||||||||||||||| Sbjct: 65578 gccggcg-gcttccgccgctgcaaggccgtccacccccactgctacctcctcga 65630 Score = 113 bits (57), Expect = 2e-21 Identities = 270/341 (79%) Strand = Plus / Plus Query: 318 gagctgctgccgagggtggccacggacgacgggacggtgatcatcacgtcggtgaacgag 377 ||||| ||||| | |||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 61596 gagcttctgcccaaggtggcaaccgacgacaggacggtgatcatcacgtcggtgaacgag 61655 Query: 378 gcgtggtcgcggccgggctccctcctcgacctcttccgcgaggggttcaagaacggggag 437 |||| ||||||| ||||||||||| ||||||||||||| | ||| ||| ||| Sbjct: 61656 gcgttcgcgcggccaaactccctcctcgtcctcttccgcgagagcttcgccgccggcgag 61715 Query: 438 ggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgacgccggcgcgctggcg 497 ||||| ||||||||| ||||| |||| |||||||||||||| ||| |||| | Sbjct: 61716 aagatcgcccacctcctcgaccacgtcctcgtcgtcgccgtcgaccccgccgcgttccac 61775 Query: 498 cactgcgaggccgtgcacccgcactgctacctcctcgaggtcaccgccgccgacgtcagc 557 |||||| || |||||||| |||||||||| |||| |||| | || || ||||| Sbjct: 61776 cactgccgcgctgtgcaccctcactgctaccacctcaaggtggacaccatgaacctcagc 61835 Query: 558 tccgccaaccgcttcatgaccaagagctacctggagctcgtgtgggccaagctggagctc 617 || |||||| |||||||| | || |||| | |||||||| ||| ||||||| ||| Sbjct: 61836 tcggccaacaacttcatgagcgaggcctacgtcgagctcgtctggaccaagctctccctc 61895 Query: 618 cagcagcgcgtcctccagctcggctacagctacctcttcac 658 ||||| ||||||||| |||||||||||| || ||||||||| Sbjct: 61896 cagcaacgcgtcctcgagctcggctacaacttcctcttcac 61936 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 988 gggtgtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctca 1047 |||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||| Sbjct: 65688 gggtgtgcacggtgcacgccaactgctgcgtcgggctggagaacaaggtgctcgacctca 65747 Query: 1048 ggaacgtcgccgccgactggaagaactacacg 1079 |||||| |||||||||||||||||||||| Sbjct: 65748 agaacgtgctcgccgactggaagaactacacg 65779 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 ||||||||||||| |||||||| |||| ||||| | ||||||||||||||||| || | Sbjct: 72148 caccatgcacgccgactgctgcgtcggcctcgacaccaaggtgcacgacctcaccgacat 72207 Query: 1055 cgccgccgactggaagaactacacgagcatggcgccgccggagagga 1101 ||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 72208 cgccgccgactggaagaactacacgggcatgtcgccggaggagagga 72254 Score = 81.8 bits (41), Expect = 6e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggtcggcgagcggctggccagcatctccagcttg 227 ||||||||||||||||||||||||||||| ||||||||||| ||| ||| || |||||| Sbjct: 64248 ctgctcttcttcctcgcctccgaccgggtgagcgagcggctgcccaccatatcgagcttg 64307 Query: 228 ggcaa 232 ||||| Sbjct: 64308 ggcaa 64312 Score = 79.8 bits (40), Expect = 2e-11 Identities = 109/132 (82%) Strand = Plus / Plus Query: 737 gttcaacggcgacgccgaggccctgaccaacgcgcccaacacgggcttctactacgtcag 796 |||||||||||| | ||| | ||||| |||| ||||||||| || |||||| |||| | Sbjct: 62275 gttcaacggcgatggcgacgacctgagcaactggcccaacaccgggttctaccacgtgaa 62334 Query: 797 gtccaccaaccgcacggtggagatgctgcgcaggtggcgggcggcgaggtcgcggttccc 856 ||| || ||||| || |||||||||||||| |||||||||||||| || || ||| ||| Sbjct: 62335 gtcgacgaaccggacagtggagatgctgcggcggtggcgggcggcgcgggcgaggtaccc 62394 Query: 857 gccgacccacga 868 ||||| |||||| Sbjct: 62395 gccgaaccacga 62406 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggtcggcgagcggctggc 211 |||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 67081 ctgctcttcttcctcgcctccgacagggtgggcgagcagctggc 67124 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1011 tgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 |||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 75314 tgctgcatcgggctggagaacaagctgcacgacctgaggaacgt 75357 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ggacggtgatcatcacgtcggtgaacgaggcgtgg 383 ||||||||||||| ||||||||||||||||||||| Sbjct: 74519 ggacggtgatcatgacgtcggtgaacgaggcgtgg 74553 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 572 catgaccaagagctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcct 631 |||||||||| |||||| || ||||| ||| |||||| |||| |||||||||||||| Sbjct: 74748 catgaccaaggactacctcgacctcgtctggagcaagctcaagctgcagcagcgcgtcct 74807 Query: 632 ccagctcggctacagctacctcttcac 658 | |||||||||||| | ||||||||| Sbjct: 74808 cgagctcggctacaacctcctcttcac 74834 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcg 1026 ||||||||||||||||||||||||| |||| |||| Sbjct: 62530 gtgcaccatgcacgccaactgctgcgtcggcctcg 62564 Score = 50.1 bits (25), Expect = 0.020 Identities = 58/69 (84%) Strand = Plus / Plus Query: 357 atcatcacgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgc 416 ||||| ||||||||||||||||||||| || |||||| || || || ||||| |||| Sbjct: 52464 atcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgctggacctgttcctg 52523 Query: 417 gaggggttc 425 ||||||||| Sbjct: 52524 gaggggttc 52532 Score = 48.1 bits (24), Expect = 0.079 Identities = 30/32 (93%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcg 1026 |||||||||||||||||||||| |||| |||| Sbjct: 53605 caccatgcacgccaactgctgcgtcggcctcg 53636 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 cgtgcacccgcactgctacctcctcg 534 |||||||||||||||||||| ||||| Sbjct: 52616 cgtgcacccgcactgctaccgcctcg 52641 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggt 196 ||||||||||||||||| |||||| |||| Sbjct: 70354 ctgctcttcttcctcgcgtccgacagggt 70382
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 208 bits (105), Expect = 4e-50 Identities = 296/357 (82%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 |||||||| || ||||| ||||||||| |||||| | ||| ||| |||||||||||||| Sbjct: 4158 ttcccgggcttgccggagttgctgccgaaggtggcgatggaggacaggacggtgatcatc 4217 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 ||||||||||||||||||||| || |||||| |||||||||||||||| |||||| | Sbjct: 4218 acgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacctctaccgcgacagc 4277 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||||||||||| ||||| ||||| ||||||||| |||| |||| |||||||||||||| Sbjct: 4278 ttcaagaacggcgaggggatcgcccacctcctcgaccatgtcctcgtcgtcgccgtcgac 4337 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcgaggtcac 541 ||| || ||| || | |||| ||||||| ||||| ||||||||||||||| | |||| Sbjct: 4338 cccgccg-gcttccgccgctgcaaggccgtccacccccactgctacctcctccacgtcaa 4396 Query: 542 cgccgccgacgtcagctccgccaaccgcttcatgaccaagagctacctggagctcgtgtg 601 || | || ||| |||||||| |||||||||| ||| | ||||| |||||||| || Sbjct: 4397 gtccatcaacctcacctccgccacccgcttcatgtccagggagtacctcgagctcgtctg 4456 Query: 602 ggccaagctggagctccagcagcgcgtcctccagctcggctacagctacctcttcac 658 | ||||||| |||||||||||||||||| |||||||||||| || ||||||||| Sbjct: 4457 gaccaagctctccctccagcagcgcgtcctcgagctcggctacaacttcctcttcac 4513 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 ||||||||||||| |||||||| |||| ||||| | ||||||||||||||||| || | Sbjct: 5322 caccatgcacgccgactgctgcgtcggcctcgacaccaaggtgcacgacctcaccgacat 5381 Query: 1055 cgccgccgactggaagaactacacgagcatggcgccgccggagagga 1101 ||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 5382 cgccgccgactggaagaactacacgggcatgtcgccggaggagagga 5428 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggtcggcgagcggctggc 211 |||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 255 ctgctcttcttcctcgcctccgacagggtgggcgagcagctggc 298 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1011 tgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 |||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 8488 tgctgcatcgggctggagaacaagctgcacgacctgaggaacgt 8531 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ggacggtgatcatcacgtcggtgaacgaggcgtgg 383 ||||||||||||| ||||||||||||||||||||| Sbjct: 7693 ggacggtgatcatgacgtcggtgaacgaggcgtgg 7727 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 572 catgaccaagagctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcct 631 |||||||||| |||||| || ||||| ||| |||||| |||| |||||||||||||| Sbjct: 7922 catgaccaaggactacctcgacctcgtctggagcaagctcaagctgcagcagcgcgtcct 7981 Query: 632 ccagctcggctacagctacctcttcac 658 | |||||||||||| | ||||||||| Sbjct: 7982 cgagctcggctacaacctcctcttcac 8008 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggt 196 ||||||||||||||||| |||||| |||| Sbjct: 3528 ctgctcttcttcctcgcgtccgacagggt 3556
>dbj|AK071688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113H16, full insert sequence Length = 1334 Score = 208 bits (105), Expect = 4e-50 Identities = 296/357 (82%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 303 ttcccggggctggcggagctgctgccgagggtggccacggacgacgggacggtgatcatc 362 |||||||| || ||||| ||||||||| |||||| | ||| ||| |||||||||||||| Sbjct: 275 ttcccgggcttgccggagttgctgccgaaggtggcgatggaggacaggacggtgatcatc 334 Query: 363 acgtcggtgaacgaggcgtggtcgcggccgggctccctcctcgacctcttccgcgagggg 422 ||||||||||||||||||||| || |||||| |||||||||||||||| |||||| | Sbjct: 335 acgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacctctaccgcgacagc 394 Query: 423 ttcaagaacggggagggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgac 482 ||||||||||| ||||| ||||| ||||||||| |||| |||| |||||||||||||| Sbjct: 395 ttcaagaacggcgaggggatcgcccacctcctcgaccatgtcctcgtcgtcgccgtcgac 454 Query: 483 gccggcgcgctggcg-cactgcgaggccgtgcacccgcactgctacctcctcgaggtcac 541 ||| || ||| || | |||| ||||||| ||||| ||||||||||||||| | |||| Sbjct: 455 cccgccg-gcttccgccgctgcaaggccgtccacccccactgctacctcctccacgtcaa 513 Query: 542 cgccgccgacgtcagctccgccaaccgcttcatgaccaagagctacctggagctcgtgtg 601 || | || ||| |||||||| |||||||||| ||| | ||||| |||||||| || Sbjct: 514 gtccatcaacctcacctccgccacccgcttcatgtccagggagtacctcgagctcgtctg 573 Query: 602 ggccaagctggagctccagcagcgcgtcctccagctcggctacagctacctcttcac 658 | ||||||| |||||||||||||||||| |||||||||||| || ||||||||| Sbjct: 574 gaccaagctctccctccagcagcgcgtcctcgagctcggctacaacttcctcttcac 630 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 ||||||||||||| |||||||| |||| ||||| | ||||||||||||||||| || | Sbjct: 964 caccatgcacgccgactgctgcgtcggcctcgacaccaaggtgcacgacctcaccgacat 1023 Query: 1055 cgccgccgactggaagaactacacgagcatggcgccgccggagagga 1101 ||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 1024 cgccgccgactggaagaactacacgggcatgtcgccggaggagagga 1070 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctccgaccgggt 196 ||||||||||||||||| |||||| |||| Sbjct: 122 ctgctcttcttcctcgcgtccgacagggt 150
>ref|NM_001051757.1| Oryza sativa (japonica cultivar-group) Os01g0920700 (Os01g0920700) mRNA, complete cds Length = 1110 Score = 157 bits (79), Expect = 1e-34 Identities = 433/551 (78%) Strand = Plus / Plus Query: 318 gagctgctgccgagggtggccacggacgacgggacggtgatcatcacgtcggtgaacgag 377 ||||| ||||| | |||||| || |||||| ||||||||||||||||||||||||||||| Sbjct: 238 gagcttctgcccaaggtggcaaccgacgacaggacggtgatcatcacgtcggtgaacgag 297 Query: 378 gcgtggtcgcggccgggctccctcctcgacctcttccgcgaggggttcaagaacggggag 437 |||| ||||||| ||||||||||| ||||||||||||| | ||| ||| ||| Sbjct: 298 gcgttcgcgcggccaaactccctcctcgtcctcttccgcgagagcttcgccgccggcgag 357 Query: 438 ggcatcgcgcacctcctcaaccacaccctcatcgtcgccgtcgacgccggcgcgctggcg 497 ||||| ||||||||| ||||| |||| |||||||||||||| ||| |||| | Sbjct: 358 aagatcgcccacctcctcgaccacgtcctcgtcgtcgccgtcgaccccgccgcgttccac 417 Query: 498 cactgcgaggccgtgcacccgcactgctacctcctcgaggtcaccgccgccgacgtcagc 557 |||||| || |||||||| |||||||||| |||| |||| | || || ||||| Sbjct: 418 cactgccgcgctgtgcaccctcactgctaccacctcaaggtggacaccatgaacctcagc 477 Query: 558 tccgccaaccgcttcatgaccaagagctacctggagctcgtgtgggccaagctggagctc 617 || |||||| |||||||| | || |||| | |||||||| ||| ||||||| ||| Sbjct: 478 tcggccaacaacttcatgagcgaggcctacgtcgagctcgtctggaccaagctctccctc 537 Query: 618 cagcagcgcgtcctccagctcggctacagctacctcttcaccgacgtcgacatcatgtgg 677 ||||| ||||||||| |||||||||||| || ||||||||| ||||| || ||| ||||| Sbjct: 538 cagcaacgcgtcctcgagctcggctacaacttcctcttcacggacgtggatatcttgtgg 597 Query: 678 ctgcgcaacccgttccggcacatcagcctctacgcggacatggccgtctccaccgaccgg 737 | | ||||||||||||||||| | | ||||| |||||| | || |||| | Sbjct: 598 ttcagggacccgttccggcacatcggggtgtacgccgacatgacgacgtcgtgcgacgtg 657 Query: 738 ttcaacggcgacgccgaggccctgaccaacgcgcccaacacgggcttctactacgtcagg 797 ||||||||||| | ||| | ||||| |||| ||||||||| || |||||| |||| | | Sbjct: 658 ttcaacggcgatggcgacgacctgagcaactggcccaacaccgggttctaccacgtgaag 717 Query: 798 tccaccaaccgcacggtggagatgctgcgcaggtggcgggcggcgaggtcgcggttcccg 857 || || ||||| || |||||||||||||| |||||||||||||| || || ||| |||| Sbjct: 718 tcgacgaaccggacagtggagatgctgcggcggtggcgggcggcgcgggcgaggtacccg 777 Query: 858 ccgacccacga 868 |||| |||||| Sbjct: 778 ccgaaccacga 788 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcg 1026 ||||||||||||||||||||||||| |||| |||| Sbjct: 912 gtgcaccatgcacgccaactgctgcgtcggcctcg 946
>ref|NM_001068858.1| Oryza sativa (japonica cultivar-group) Os08g0530100 (Os08g0530100) mRNA, partial cds Length = 761 Score = 77.8 bits (39), Expect = 9e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 932 gttcctggagacggcgctcttcgacggcttctgccagctccacggcgagatggaccgggt 991 |||||| || ||||||| || || |||||||||||||||| | |||| |||| | |||| Sbjct: 165 gttcctcgacacggcgcactgcggcggcttctgccagctcagccgcgacatggccagggt 224 Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctc 1046 ||||| | |||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 225 ctgcacgctccacgccaactgctgcaccggcctcgccaacaaggtgcacgacctc 279
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 77.8 bits (39), Expect = 9e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 932 gttcctggagacggcgctcttcgacggcttctgccagctccacggcgagatggaccgggt 991 |||||| || ||||||| || || |||||||||||||||| | |||| |||| | |||| Sbjct: 26393644 gttcctcgacacggcgcactgcggcggcttctgccagctcagccgcgacatggccagggt 26393703 Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctc 1046 ||||| | |||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 26393704 ctgcacgctccacgccaactgctgcaccggcctcgccaacaaggtgcacgacctc 26393758 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Plus Query: 510 gtgcacccgcactgctacctcctc 533 |||||||||||||||||||||||| Sbjct: 26392472 gtgcacccgcactgctacctcctc 26392495
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 77.8 bits (39), Expect = 9e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 932 gttcctggagacggcgctcttcgacggcttctgccagctccacggcgagatggaccgggt 991 |||||| || ||||||| || || |||||||||||||||| | |||| |||| | |||| Sbjct: 123225 gttcctcgacacggcgcactgcggcggcttctgccagctcagccgcgacatggccagggt 123284 Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctc 1046 ||||| | |||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 123285 ctgcacgctccacgccaactgctgcaccggcctcgccaacaaggtgcacgacctc 123339 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Plus Query: 510 gtgcacccgcactgctacctcctc 533 |||||||||||||||||||||||| Sbjct: 122053 gtgcacccgcactgctacctcctc 122076
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 77.8 bits (39), Expect = 9e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 932 gttcctggagacggcgctcttcgacggcttctgccagctccacggcgagatggaccgggt 991 |||||| || ||||||| || || |||||||||||||||| | |||| |||| | |||| Sbjct: 43196 gttcctcgacacggcgcactgcggcggcttctgccagctcagccgcgacatggccagggt 43255 Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctc 1046 ||||| | |||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 43256 ctgcacgctccacgccaactgctgcaccggcctcgccaacaaggtgcacgacctc 43310 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Plus Query: 510 gtgcacccgcactgctacctcctc 533 |||||||||||||||||||||||| Sbjct: 42024 gtgcacccgcactgctacctcctc 42047
>dbj|AK066822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077F20, full insert sequence Length = 762 Score = 77.8 bits (39), Expect = 9e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 932 gttcctggagacggcgctcttcgacggcttctgccagctccacggcgagatggaccgggt 991 |||||| || ||||||| || || |||||||||||||||| | |||| |||| | |||| Sbjct: 166 gttcctcgacacggcgcactgcggcggcttctgccagctcagccgcgacatggccagggt 225 Query: 992 gtgcaccatgcacgccaactgctgcatcgggctcgagaacaaggtgcacgacctc 1046 ||||| | |||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 226 ctgcacgctccacgccaactgctgcaccggcctcgccaacaaggtgcacgacctc 280
>dbj|AK243195.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100040A04, full insert sequence Length = 1674 Score = 65.9 bits (33), Expect = 3e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 572 catgaccaagagctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcct 631 |||||||||| |||||| || ||||| ||| |||||| |||| |||||||||||||| Sbjct: 553 catgaccaaggactacctcgacctcgtctggagcaagctcaagctgcagcagcgcgtcct 612 Query: 632 ccagctcggctacagctacctcttcaccgacgt 664 | |||||||||||| | ||||||||| ||||| Sbjct: 613 cgagctcggctacaacctcctcttcacggacgt 645 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1011 tgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 |||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 1007 tgctgcatcgggctggagaacaagctgcacgacctgaggaacgt 1050 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ggacggtgatcatcacgtcggtgaacgaggcgtgg 383 ||||||||||||| ||||||||||||||||||||| Sbjct: 324 ggacggtgatcatgacgtcggtgaacgaggcgtgg 358
>ref|NM_001051759.1| Oryza sativa (japonica cultivar-group) Os01g0921100 (Os01g0921100) mRNA, complete cds Length = 1152 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1011 tgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 |||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 1012 tgctgcatcgggctggagaacaagctgcacgacctgaggaacgt 1055 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ggacggtgatcatcacgtcggtgaacgaggcgtgg 383 ||||||||||||| ||||||||||||||||||||| Sbjct: 293 ggacggtgatcatgacgtcggtgaacgaggcgtgg 327
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1011 tgctgcatcgggctcgagaacaaggtgcacgacctcaggaacgt 1054 |||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 886 tgctgcatcgggctggagaacaagctgcacgacctgaggaacgt 929 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 349 ggacggtgatcatcacgtcggtgaacgaggcgtgg 383 ||||||||||||| ||||||||||||||||||||| Sbjct: 91 ggacggtgatcatgacgtcggtgaacgaggcgtgg 125 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 572 catgaccaagagctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcct 631 |||||||||| |||||| || ||||| ||| |||||| |||| |||||||||||||| Sbjct: 320 catgaccaaggactacctcgacctcgtctggagcaagctcaagctgcagcagcgcgtcct 379 Query: 632 ccagctcggctacagctacctcttcac 658 | |||||||||||| | ||||||||| Sbjct: 380 cgagctcggctacaacctcctcttcac 406
>ref|NM_001058436.1| Oryza sativa (japonica cultivar-group) Os03g0849900 (Os03g0849900) mRNA, complete cds Length = 1474 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 584 ctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcctccagctcggcta 643 |||||| |||||||| ||| |||||| ||||||||| || | |||||||||||||| Sbjct: 702 ctacctcgagctcgtctggagcaagctcaagctccagcgccgaattctccagctcggcta 761 Query: 644 cagctacctcttcaccgacgtcgacatcatgtggctg 680 || || ||||||||| ||||| ||||| |||||||| Sbjct: 762 caacttcctcttcacggacgttgacattgtgtggctg 798 Score = 58.0 bits (29), Expect = 8e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 993 tgcaccatgcacgccaactgctgcatcgg 1021 ||||||||||||||||||||||||||||| Sbjct: 1108 tgcaccatgcacgccaactgctgcatcgg 1136
>ref|NM_001055384.1| Oryza sativa (japonica cultivar-group) Os03g0129500 (Os03g0129500) mRNA, complete cds Length = 1020 Score = 58.0 bits (29), Expect = 8e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 989 ggtgtgcaccatgcacgccaactgctgcatcgg 1021 |||||||||||||||||||||||||||| |||| Sbjct: 654 ggtgtgcaccatgcacgccaactgctgcgtcgg 686
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 58.0 bits (29), Expect = 8e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 989 ggtgtgcaccatgcacgccaactgctgcatcgg 1021 |||||||||||||||||||||||||||| |||| Sbjct: 55480 ggtgtgcaccatgcacgccaactgctgcgtcgg 55448
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 58.0 bits (29), Expect = 8e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 989 ggtgtgcaccatgcacgccaactgctgcatcgg 1021 |||||||||||||||||||||||||||| |||| Sbjct: 1648032 ggtgtgcaccatgcacgccaactgctgcgtcgg 1648000 Score = 58.0 bits (29), Expect = 8e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 993 tgcaccatgcacgccaactgctgcatcgg 1021 ||||||||||||||||||||||||||||| Sbjct: 35554816 tgcaccatgcacgccaactgctgcatcgg 35554844 Score = 46.1 bits (23), Expect = 0.31 Identities = 32/35 (91%) Strand = Plus / Plus Query: 626 cgtcctccagctcggctacagctacctcttcaccg 660 ||||||| ||||||||||||||| | ||||||||| Sbjct: 29748761 cgtcctcaagctcggctacagcttcatcttcaccg 29748795 Score = 46.1 bits (23), Expect = 0.31 Identities = 62/75 (82%) Strand = Plus / Plus Query: 584 ctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcctccagctcggcta 643 |||||| |||||||| ||| |||||| ||||||||| || | |||||||||||||| Sbjct: 35554324 ctacctcgagctcgtctggagcaagctcaagctccagcgccgaattctccagctcggcta 35554383 Query: 644 cagctacctcttcac 658 || || ||||||||| Sbjct: 35554384 caacttcctcttcac 35554398
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 58.0 bits (29), Expect = 8e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 993 tgcaccatgcacgccaactgctgcatcgg 1021 ||||||||||||||||||||||||||||| Sbjct: 22882 tgcaccatgcacgccaactgctgcatcgg 22854 Score = 46.1 bits (23), Expect = 0.31 Identities = 62/75 (82%) Strand = Plus / Minus Query: 584 ctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcctccagctcggcta 643 |||||| |||||||| ||| |||||| ||||||||| || | |||||||||||||| Sbjct: 23374 ctacctcgagctcgtctggagcaagctcaagctccagcgccgaattctccagctcggcta 23315 Query: 644 cagctacctcttcac 658 || || ||||||||| Sbjct: 23314 caacttcctcttcac 23300
>dbj|AK105978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F09, full insert sequence Length = 1474 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 584 ctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcctccagctcggcta 643 |||||| |||||||| ||| |||||| ||||||||| || | |||||||||||||| Sbjct: 702 ctacctcgagctcgtctggagcaagctcaagctccagcgccgaattctccagctcggcta 761 Query: 644 cagctacctcttcaccgacgtcgacatcatgtggctg 680 || || ||||||||| ||||| ||||| |||||||| Sbjct: 762 caacttcctcttcacggacgttgacattgtgtggctg 798 Score = 58.0 bits (29), Expect = 8e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 993 tgcaccatgcacgccaactgctgcatcgg 1021 ||||||||||||||||||||||||||||| Sbjct: 1108 tgcaccatgcacgccaactgctgcatcgg 1136
>dbj|AK104518.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D02, full insert sequence Length = 1433 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 584 ctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcctccagctcggcta 643 |||||| |||||||| ||| |||||| ||||||||| || | |||||||||||||| Sbjct: 672 ctacctcgagctcgtctggagcaagctcaagctccagcgccgaattctccagctcggcta 731 Query: 644 cagctacctcttcaccgacgtcgacatcatgtggctg 680 || || ||||||||| ||||| ||||| |||||||| Sbjct: 732 caacttcctcttcacggacgttgacattgtgtggctg 768 Score = 58.0 bits (29), Expect = 8e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 993 tgcaccatgcacgccaactgctgcatcgg 1021 ||||||||||||||||||||||||||||| Sbjct: 1078 tgcaccatgcacgccaactgctgcatcgg 1106
>dbj|AK071606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099J20, full insert sequence Length = 1470 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 584 ctacctggagctcgtgtgggccaagctggagctccagcagcgcgtcctccagctcggcta 643 |||||| |||||||| ||| |||||| ||||||||| || | |||||||||||||| Sbjct: 698 ctacctcgagctcgtctggagcaagctcaagctccagcgccgaattctccagctcggcta 757 Query: 644 cagctacctcttcaccgacgtcgacatcatgtggctg 680 || || ||||||||| ||||| ||||| |||||||| Sbjct: 758 caacttcctcttcacggacgttgacattgtgtggctg 794 Score = 58.0 bits (29), Expect = 8e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 993 tgcaccatgcacgccaactgctgcatcgg 1021 ||||||||||||||||||||||||||||| Sbjct: 1104 tgcaccatgcacgccaactgctgcatcgg 1132
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 58.0 bits (29), Expect = 8e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 989 ggtgtgcaccatgcacgccaactgctgcatcgg 1021 |||||||||||||||||||||||||||| |||| Sbjct: 60497 ggtgtgcaccatgcacgccaactgctgcgtcgg 60465
>ref|NM_001057701.1| Oryza sativa (japonica cultivar-group) Os03g0731800 (Os03g0731800) mRNA, complete cds Length = 1389 Score = 48.1 bits (24), Expect = 0.079 Identities = 33/36 (91%) Strand = Plus / Plus Query: 626 cgtcctccagctcggctacagctacctcttcaccga 661 ||||||| ||||||||||||||| | |||||||||| Sbjct: 574 cgtcctcaagctcggctacagcttcatcttcaccga 609
>ref|NM_001051756.1| Oryza sativa (japonica cultivar-group) Os01g0920500 (Os01g0920500) mRNA, partial cds Length = 729 Score = 48.1 bits (24), Expect = 0.079 Identities = 30/32 (93%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcg 1026 |||||||||||||||||||||| |||| |||| Sbjct: 356 caccatgcacgccaactgctgcgtcggcctcg 387
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 48.1 bits (24), Expect = 0.079 Identities = 30/32 (93%) Strand = Plus / Minus Query: 463 ccctcatcgtcgccgtcgacgccggcgcgctg 494 ||||| |||||||||||| ||||||||||||| Sbjct: 1230693 ccctcctcgtcgccgtcgtcgccggcgcgctg 1230662
>dbj|AK107508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E08, full insert sequence Length = 729 Score = 48.1 bits (24), Expect = 0.079 Identities = 30/32 (93%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgcatcgggctcg 1026 |||||||||||||||||||||| |||| |||| Sbjct: 356 caccatgcacgccaactgctgcgtcggcctcg 387
>dbj|AK105543.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H12, full insert sequence Length = 1391 Score = 48.1 bits (24), Expect = 0.079 Identities = 33/36 (91%) Strand = Plus / Plus Query: 626 cgtcctccagctcggctacagctacctcttcaccga 661 ||||||| ||||||||||||||| | |||||||||| Sbjct: 574 cgtcctcaagctcggctacagcttcatcttcaccga 609
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 48.1 bits (24), Expect = 0.079 Identities = 27/28 (96%) Strand = Plus / Minus Query: 821 gctgcgcaggtggcgggcggcgaggtcg 848 ||||||||||| |||||||||||||||| Sbjct: 578847 gctgcgcaggtagcgggcggcgaggtcg 578820 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 gcagcacggcggcgtcggcggc 122 |||||||||||||||||||||| Sbjct: 223656 gcagcacggcggcgtcggcggc 223677
>ref|XM_609150.2| PREDICTED: Bos taurus similar to roundabout, axon guidance receptor, homolog 3 (LOC530674), mRNA Length = 2766 Score = 46.1 bits (23), Expect = 0.31 Identities = 29/31 (93%) Strand = Plus / Plus Query: 305 cccggggctggcggagctgctgccgagggtg 335 ||||||||||||||||| |||| |||||||| Sbjct: 2535 cccggggctggcggagcggctggcgagggtg 2565
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 46.1 bits (23), Expect = 0.31 Identities = 32/35 (91%) Strand = Plus / Minus Query: 626 cgtcctccagctcggctacagctacctcttcaccg 660 ||||||| ||||||||||||||| | ||||||||| Sbjct: 114038 cgtcctcaagctcggctacagcttcatcttcaccg 114004
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 398 cctcctcgacctcttccgcgagg 420 ||||||||||||||||||||||| Sbjct: 6376649 cctcctcgacctcttccgcgagg 6376627 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cacggcggcgtcggcggcagc 125 ||||||||||||||||||||| Sbjct: 6747908 cacggcggcgtcggcggcagc 6747888
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 166 tcctgctcttcttcctcgcctcc 188 ||||||||||||||||||||||| Sbjct: 324322 tcctgctcttcttcctcgcctcc 324300 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 tcctgctcttcttcctcgcctcc 188 ||||||||||||||||||||||| Sbjct: 522784 tcctgctcttcttcctcgcctcc 522806
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_D05 Length = 128178 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 398 cctcctcgacctcttccgcgagg 420 ||||||||||||||||||||||| Sbjct: 18642 cctcctcgacctcttccgcgagg 18620
>ref|NM_001065939.1| Oryza sativa (japonica cultivar-group) Os07g0294800 (Os07g0294800) mRNA, complete cds Length = 1570 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgc 1016 |||||||||||||||||||||| Sbjct: 1137 caccatgcacgccaactgctgc 1158
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 615 ctccagcagcgcgtcctccagc 636 |||||||||||||||||||||| Sbjct: 1987098 ctccagcagcgcgtcctccagc 1987077
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 808 gcacggtggagatgctgcgcag 829 |||||||||||||||||||||| Sbjct: 7974261 gcacggtggagatgctgcgcag 7974282
>ref|NM_102638.2| Arabidopsis thaliana unknown protein (AT1G28710) mRNA, complete cds Length = 1269 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 773 caacacgggcttctactacgtcaggtccaccaac 806 ||||||||| |||||| |||||||||||| |||| Sbjct: 666 caacacgggattctaccacgtcaggtccaacaac 699
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 866 cgaccaggcggtgttcgacgagatca 891 |||||||| ||||||||||||||||| Sbjct: 2618296 cgaccaggaggtgttcgacgagatca 2618271
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 620 gcagcgcgtcctccagctcggc 641 |||||||||||||||||||||| Sbjct: 1982301 gcagcgcgtcctccagctcggc 1982322
>gb|AY920597.1| Uncultured bacterium clone LW-Menr-FhcD10 formyltransferase/hydrolase complex subunit D (fhcD) gene, partial cds Length = 793 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 catcgtcgccgtcgacgccggc 488 |||||||||||||||||||||| Sbjct: 752 catcgtcgccgtcgacgccggc 773
>gb|AY091379.1| Arabidopsis thaliana unknown protein (At1g28710) mRNA, complete cds Length = 1054 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 773 caacacgggcttctactacgtcaggtccaccaac 806 ||||||||| |||||| |||||||||||| |||| Sbjct: 633 caacacgggattctaccacgtcaggtccaacaac 666
>gb|AY045852.1| Arabidopsis thaliana unknown protein (At1g28710) mRNA, complete cds Length = 1286 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 773 caacacgggcttctactacgtcaggtccaccaac 806 ||||||||| |||||| |||||||||||| |||| Sbjct: 666 caacacgggattctaccacgtcaggtccaacaac 699
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgc 1016 |||||||||||||||||||||| Sbjct: 11536859 caccatgcacgccaactgctgc 11536880 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 gtcgccgtcgacgccggcgcg 491 ||||||||||||||||||||| Sbjct: 742125 gtcgccgtcgacgccggcgcg 742105
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 469 tcgtcgccgtcgacgccggcgcgctg 494 ||||||||||||| |||||||||||| Sbjct: 160674 tcgtcgccgtcgaagccggcgcgctg 160699
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 469 tcgtcgccgtcgacgccggcgcgctg 494 ||||||||||||| |||||||||||| Sbjct: 77444 tcgtcgccgtcgaagccggcgcgctg 77419
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 469 tcgtcgccgtcgacgccggcgcgctg 494 ||||||||||||| |||||||||||| Sbjct: 36280 tcgtcgccgtcgaagccggcgcgctg 36305
>gb|AC007508.2|AC007508 Genomic sequence for Arabidopsis thaliana BAC F1K23 from chromosome I, complete sequence Length = 101305 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 773 caacacgggcttctactacgtcaggtccaccaac 806 ||||||||| |||||| |||||||||||| |||| Sbjct: 44911 caacacgggattctaccacgtcaggtccaacaac 44944
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgc 1016 |||||||||||||||||||||| Sbjct: 100517 caccatgcacgccaactgctgc 100538
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446G09 Length = 146898 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgc 1016 |||||||||||||||||||||| Sbjct: 146379 caccatgcacgccaactgctgc 146400
>dbj|AK065831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037A06, full insert sequence Length = 1571 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 995 caccatgcacgccaactgctgc 1016 |||||||||||||||||||||| Sbjct: 1138 caccatgcacgccaactgctgc 1159
>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster, complete sequence Length = 59816 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 647 ctacctcttcaccgacgtcgac 668 |||||||||||||||||||||| Sbjct: 38728 ctacctcttcaccgacgtcgac 38749
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cgaccgggtcggcgagcggctggcc 212 |||||||||| |||||||||||||| Sbjct: 461347 cgaccgggtccgcgagcggctggcc 461371
>gb|CP000460.1| Burkholderia cenocepacia HI2424 chromosome 3, complete genome Length = 1055417 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 cgtcgccgtcgacgccggcgcgctg 494 ||||||||||||||||| ||||||| Sbjct: 376751 cgtcgccgtcgacgccgacgcgctg 376727
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 829 ggtggcgggcggcgaggtcgcggtt 853 |||||||||| |||||||||||||| Sbjct: 5930606 ggtggcgggcagcgaggtcgcggtt 5930582
>dbj|AK235932.1| Sus scrofa mRNA, clone:OVRM10126H01, expressed in ovary Length = 2335 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 tcccggggctggcggagctgc 324 ||||||||||||||||||||| Sbjct: 477 tcccggggctggcggagctgc 497
>ref|NM_001065283.1| Oryza sativa (japonica cultivar-group) Os07g0113500 (Os07g0113500) mRNA, complete cds Length = 1905 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 gtcgccgtcgacgccggcgcg 491 ||||||||||||||||||||| Sbjct: 195 gtcgccgtcgacgccggcgcg 175
>gb|DQ403252.1| Streptomyces fungicidicus DXP synthase 2 gene, partial cds; cationic amino acid transporter, transcriptional regulator, glycosyltransferase, fatty acid oxidation complex alpha-subunit, acetyl-CoA acetyltransferase, transcriptional regulator, beta-mannosidase, probable sugar transport system sugar-binding lipoprotein, sugar transport system permease proteins, ribonuclease D, two-component response regulator, uroporphyrinogen decarboxylase, and PAS protein phosphatase 2C-like protein genes, complete cds; peptide antibiotic enduracidin biosynthetic gene cluster, complete sequence; and unknown genes Length = 116000 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 cggtgatcatcacgtcggtga 372 ||||||||||||||||||||| Sbjct: 9380 cggtgatcatcacgtcggtga 9360
>ref|XM_001216407.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_07786) mRNA, complete cds Length = 1305 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 ccagcagcgcgtcctccagct 637 ||||||||||||||||||||| Sbjct: 586 ccagcagcgcgtcctccagct 566
>ref|NM_001077135.1| Bos taurus transmembrane and coiled-coil domain family 2 (TMCC2), mRNA gb|BC123417.1| Bos taurus transmembrane and coiled-coil domain family 2, mRNA (cDNA clone MGC:139674 IMAGE:8211749), complete cds Length = 3672 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ccaagctggagctccagcagc 624 ||||||||||||||||||||| Sbjct: 2293 ccaagctggagctccagcagc 2313
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 880 tcgacgagatcaagggcgagctggctgcc 908 ||||||||||| || |||||||||||||| Sbjct: 2892775 tcgacgagatcgagagcgagctggctgcc 2892747
>ref|XM_001144639.1| PREDICTED: Pan troglodytes similar to uncharacterized hypothalamus protein HTMP, transcript variant 1 (LOC737422), mRNA Length = 1606 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1087 cgccgccggagaggacgggcg 1107 ||||||||||||||||||||| Sbjct: 59 cgccgccggagaggacgggcg 79
>ref|XM_001145009.1| PREDICTED: Pan troglodytes similar to uncharacterized hypothalamus protein HTMP, transcript variant 3 (LOC737422), mRNA Length = 1978 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1087 cgccgccggagaggacgggcg 1107 ||||||||||||||||||||| Sbjct: 59 cgccgccggagaggacgggcg 79
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 865 acgaccaggcggtgttcgacg 885 ||||||||||||||||||||| Sbjct: 2657630 acgaccaggcggtgttcgacg 2657650
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 cgaccgggtcggcgagcggct 208 ||||||||||||||||||||| Sbjct: 69071 cgaccgggtcggcgagcggct 69051
>gb|CP000380.1| Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence Length = 1196094 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 cgtcgccgtcgacgccggcgcgctg 494 ||||||||||||||||| ||||||| Sbjct: 398931 cgtcgccgtcgacgccgacgcgctg 398907
>gb|BC107582.1| Homo sapiens transmembrane protein 165, mRNA (cDNA clone MGC:104345 IMAGE:4691718), complete cds Length = 1961 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1087 cgccgccggagaggacgggcg 1107 ||||||||||||||||||||| Sbjct: 19 cgccgccggagaggacgggcg 39
>gb|AY022908.1| Oryza sativa microsatellite MRG5233 containing (CGT)X8, closest to marker R394, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cacggcggcgtcggcggcagc 125 ||||||||||||||||||||| Sbjct: 30 cacggcggcgtcggcggcagc 10
>ref|XM_535319.2| PREDICTED: Canis familiaris similar to DnaJ homolog subfamily A member 2 (HIRA interacting protein 4) (Cell cycle progression restoration gene 3 protein) (Dnj3) (LOC478143), mRNA Length = 1830 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cacggcggcgtcggcggcagc 125 ||||||||||||||||||||| Sbjct: 781 cacggcggcgtcggcggcagc 761
>dbj|AK123358.1| Homo sapiens cDNA FLJ41364 fis, clone BRCAN2003944, moderately similar to Homo sapiens transmembrane protein PT27 mRNA Length = 1871 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1087 cgccgccggagaggacgggcg 1107 ||||||||||||||||||||| Sbjct: 352 cgccgccggagaggacgggcg 372
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 615 ctccagcagcgcgtcctccag 635 ||||||||||||||||||||| Sbjct: 1365937 ctccagcagcgcgtcctccag 1365917
>gb|AF525299.1| Pseudonocardia autotrophica P-450 gene cluster, partial sequence Length = 4770 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 cctcgaggtcaccgccgccgacgtc 554 |||||||||||||| |||||||||| Sbjct: 2194 cctcgaggtcaccggcgccgacgtc 2218
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 agcagcacggcggcgtcggcg 120 ||||||||||||||||||||| Sbjct: 946790 agcagcacggcggcgtcggcg 946770
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 649 acctcttcaccgacgtcgaca 669 ||||||||||||||||||||| Sbjct: 171976 acctcttcaccgacgtcgaca 171956
>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence Length = 214160 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1220 tcagccctgtaaatctcaaat 1240 ||||||||||||||||||||| Sbjct: 112250 tcagccctgtaaatctcaaat 112270
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 828 aggtggcgggcggcgaggtcgcggt 852 |||| |||||||||||||||||||| Sbjct: 23378214 aggtagcgggcggcgaggtcgcggt 23378238
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 ggcggcgtcggcggcagccac 128 ||||||||||||||||||||| Sbjct: 14978431 ggcggcgtcggcggcagccac 14978411
>emb|Z97987.1|HS453P22 Human DNA sequence from clone RP3-453P22 on chromosome 1p36.2-36.3 Contains two novel genes, complete sequence Length = 155176 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ctgctcttcttcctcgcctcc 188 ||||||||||||||||||||| Sbjct: 65265 ctgctcttcttcctcgcctcc 65285
>emb|AL590705.9| Human DNA sequence from clone RP11-498P14 on chromosome 9 Contains four novel genes, a novel gene similar to FLJ23393. the 5' end of a novel gene (KIAA1529) and two CpG islands, complete sequence Length = 130244 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 ccaagctggagctccagcagc 624 ||||||||||||||||||||| Sbjct: 128479 ccaagctggagctccagcagc 128459
>emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chromosome 9 Contains the 3' end of the gene for KIAA1529 protein, the 5' end of a gene for tudor repeat associator with PCTAIRE 2 (PCTAIRE2BP), a pseudogene similar to part of ral guanine nucleotide dissociation stimulator (RALGDS) and two CpG islands, complete sequence Length = 165432 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 ccaagctggagctccagcagc 624 ||||||||||||||||||||| Sbjct: 235 ccaagctggagctccagcagc 215
>gb|AC069200.6| Homo sapiens BAC clone RP11-177J6 from 4, complete sequence Length = 148930 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1087 cgccgccggagaggacgggcg 1107 ||||||||||||||||||||| Sbjct: 28662 cgccgccggagaggacgggcg 28682
>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence Length = 171343 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1220 tcagccctgtaaatctcaaat 1240 ||||||||||||||||||||| Sbjct: 64760 tcagccctgtaaatctcaaat 64740
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 tcctgctcttcttcctcgcct 186 ||||||||||||||||||||| Sbjct: 8133242 tcctgctcttcttcctcgcct 8133262
>gb|AC009048.6|AC009048 Homo sapiens chromosome 16 clone RP11-211H13, complete sequence Length = 163844 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 gcatctccagcttgggcaaca 234 ||||||||||||||||||||| Sbjct: 123081 gcatctccagcttgggcaaca 123061
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 880 tcgacgagatcaagggcgagc 900 ||||||||||||||||||||| Sbjct: 24501 tcgacgagatcaagggcgagc 24521
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 4.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 533 cgaggtcaccgccgccgacgtcagctccgccaa 565 ||||||||||||||||||| || ||||||||| Sbjct: 141954 cgaggtcaccgccgccgacttcgcctccgccaa 141986
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 621 cagcgcgtcctccagctcggc 641 ||||||||||||||||||||| Sbjct: 227485 cagcgcgtcctccagctcggc 227505
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 gtcgccgtcgacgccggcgcg 491 ||||||||||||||||||||| Sbjct: 80656 gtcgccgtcgacgccggcgcg 80636
>gb|AF546146.1| Lechevalieria aerocolonigenes UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10015 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 471 gtcgccgtcgacgccggcgcgctgg 495 |||| |||||||||||||||||||| Sbjct: 6460 gtcggcgtcgacgccggcgcgctgg 6484
>dbj|AP004755.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0543C04 Length = 147889 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 ggcggcgtcggcggcagccac 128 ||||||||||||||||||||| Sbjct: 76492 ggcggcgtcggcggcagccac 76472
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 gtcgccgtcgacgccggcgcg 491 ||||||||||||||||||||| Sbjct: 61932 gtcgccgtcgacgccggcgcg 61912
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cacggcggcgtcggcggcagc 125 ||||||||||||||||||||| Sbjct: 68961 cacggcggcgtcggcggcagc 68941
>gb|AY827104.1| Pseudonocardia autotrophica BCRC12444 fad gene cluster, partial sequence Length = 4656 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 cctcgaggtcaccgccgccgacgtc 554 |||||||||||||| |||||||||| Sbjct: 2181 cctcgaggtcaccggcgccgacgtc 2205
>ref|XM_313201.2| Anopheles gambiae str. PEST ENSANGP00000017801 (ENSANGG00000015312), partial mRNA Length = 2052 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 gccgccgacgtcagctccgcc 563 ||||||||||||||||||||| Sbjct: 1181 gccgccgacgtcagctccgcc 1161
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 cgaccgggtcggcgagcggctggcc 212 |||||||||| |||||||||||||| Sbjct: 441063 cgaccgggtccgcgagcggctggcc 441087
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 aggtggcgggcggcgaggtcgcggt 852 |||| |||||||||||||||||||| Sbjct: 123945 aggtagcgggcggcgaggtcgcggt 123921
>gb|L23174.1|STMAMPEPP Streptomyces lividans aminopeptidase P (Pep P) gene, complete cds Length = 1482 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 621 cagcgcgtcctccagctcggc 641 ||||||||||||||||||||| Sbjct: 626 cagcgcgtcctccagctcggc 606 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 177,316,916 Number of extensions: 9815055 Number of successful extensions: 264775 Number of sequences better than 10.0: 98 Number of HSP's gapped: 264774 Number of HSP's successfully gapped: 198 Length of query: 1284 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1261 Effective length of database: 18,503,978,556 Effective search space: 23333516959116 Effective search space used: 23333516959116 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
