| Clone Name | FLbaf31a03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009398.1| Triticum aestivum clone wlm96.pk042.k21:fis, full insert mRNA sequence Length = 937 Score = 981 bits (495), Expect = 0.0 Identities = 811/917 (88%), Gaps = 22/917 (2%) Strand = Plus / Plus Query: 42 ggcggctctgtccggagcagcgctcgtcctcgccggtctccttgctcttgcagccatcgc 101 |||||||||| |||| ||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 7 ggcggctctgaccggtgcagcgctcctcctcgccagcctccttgctcttgcagccatagc 66 Query: 102 cagcggcaacaccgaaggcgacatcctctacaggcaaaggcaggaactgaaggacatcaa 161 |||||||||||||||||| |||||||||||| |||||||| || ||||||| ||| Sbjct: 67 cagcggcaacaccgaaggtgacatcctctactcgcaaaggctggcgtggaaggaccccaa 126 Query: 162 caacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcac 221 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127 caacgtgctgcagagctgggatcccacccttgtcaacccctgcacttggttccatgtcac 186 Query: 222 ctgcaa---------cagcgacaactccgtcgtccgagtggacttggggaatgcaagcct 272 |||||| || || |||||||||| ||||||||||||||||||||||| |||| Sbjct: 187 ctgcaacaacgtcaacaacgtcaactccgtcatccgagtggacttggggaatgcaggcct 246 Query: 273 ctcaggctccctggttcctgaattgggacaaatggtgaaccttcagtacctggagctgtt 332 ||||||| |||||||||||| | |||||| |||||||||||||||||||||||||||||| Sbjct: 247 ctcaggcgccctggttcctggactgggacgaatggtgaaccttcagtacctggagctgtt 306 Query: 333 tgggaacaacatcagtggaccgataccagcaaccctcggaaacctgacacgcctggtcag 392 ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 307 tgggaacaatatcagtggaccgattccagcaaccctcggcaacctgacacgcctggtcag 366 Query: 393 ccttgacctctacaacaaccgtctcaccggcatgataccggcctcgctcgggaacatcgg 452 |||||| |||||| |||||| |||||||||| |||||| |||||||||||||||||||| Sbjct: 367 ccttgatctctacgacaaccatctcaccggcgcgataccagcctcgctcgggaacatcgg 426 Query: 453 gacgctgcgtttcctgaggctgaatgggaacaagctgacaggaggtatacctgcgtcatt 512 |||||||||||||||||||||| | ||||||||| | |||| |||||||| |||| || Sbjct: 427 gacgctgcgtttcctgaggctgcacgggaacaagtttgcaggtggtataccgtcgtcgtt 486 Query: 513 gggcaatctaacgaagcttcaaactttggagcttcaggagaacatgctgaccggcatggt 572 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 487 gggccgtctgacgaagcttcaaactttggagcttcaggagaacatgctgaccggcacagt 546 Query: 573 gccgctggatttcttatctcttgttctttttggggacttgactgaacttaacgttgccaa 632 ||||||||| || | |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 547 gccgctggaagtcctctctcttgttcttcttggggacttgactgaacttaacgttgccaa 606 Query: 633 gaacagtctgtccggcactgtcaaatcatctaaaccaagagtagctacaatcatccagga 692 |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 607 gaacagtctggccggcactgtcaaatcatctaaaccaagagtagctaccgtcatccagga 666 Query: 693 cacgctcaagactacac--------gctgagcagcagtgacaacctgaacttttgtaaga 744 ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 667 cacgctcaagactacacgtctacatgctgagcagcactgacaacctgaacttttctaaga 726 Query: 745 ataaactgaatg-tcttttccttctgaaactgctgggagaggctgtagccttttatcccg 803 |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||| ||| Sbjct: 727 ataaactgaatgtttttttccttttgaaactgctggaagaggctgtagccttttattccg 786 Query: 804 ttaagagtccagagcttacctccatttcaggagagaaaaagggaaaaagtgaaaggtgat 863 ||||||| || ||||||| |||||||| ||||||||||||||||| ||||||||| | Sbjct: 787 ttaagagcccctagcttacatccatttctagagagaaaaagggaaaaggtgaaaggtagt 846 Query: 864 ttaatacttacattgtaatcagtgcgactttgtaatgatgaatcttcatgtgcatcttta 923 | || ||||||||||||||||| |||| |||| ||||||||| | |||| ||||| Sbjct: 847 tgaa----tacattgtaatcagtgcaacttcataataatgaatctttctctgcaccttta 902 Query: 924 ctgcatatccggtgtta 940 ||||||||| |||||| Sbjct: 903 gtgcatatccagtgtta 919
>gb|BT009386.1| Triticum aestivum clone wlm96.pk034.m17:fis, full insert mRNA sequence Length = 1030 Score = 575 bits (290), Expect = e-160 Identities = 614/722 (85%) Strand = Plus / Plus Query: 35 cagcaatggcggctctgtccggagcagcgctcgtcctcgccggtctccttgctcttgcag 94 |||||||||| |||| | ||||||||| |||| |||||| ||| ||||||||||||||| Sbjct: 31 cagcaatggcagctcagaccggagcagtgctcctcctcgtcggcctccttgctcttgcaa 90 Query: 95 ccatcgccagcggcaacaccgaaggcgacatcctctacaggcaaaggcaggaactgaagg 154 |||| |||||| ||||||| |||||||||||||| ||| ||||||||||| ||||| Sbjct: 91 ccatggccagcagcaacactgaaggcgacatcctttactcgcaaaggcaggtgtggaagg 150 Query: 155 acatcaacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttcc 214 | ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 151 atcccaacaacgttctgacaagctgggatccgacgcttgtcaacccctgcacttggttcc 210 Query: 215 atgtcacctgcaacagcgacaactccgtcgtccgagtggacttggggaatgcaagcctct 274 |||||||||||||| ||||||||||||| ||||||||| |||||||| ||| || ||| Sbjct: 211 atgtcacctgcaacctcgacaactccgtcacccgagtggatttggggaacgcaggcatct 270 Query: 275 caggctccctggttcctgaattgggacaaatggtgaaccttcagtacctggagctgtttg 334 ||||| ||||| ||||| || |||||||| || |||||| |||||||||||||| | | Sbjct: 271 caggcaccctgattcctcaactgggacaactgaagaacctgcagtacctggagctatacg 330 Query: 335 ggaacaacatcagtggaccgataccagcaaccctcggaaacctgacacgcctggtcagcc 394 ||||||| || |||||||| |||||| | ||||| || |||||||||||||||||||||| Sbjct: 331 ggaacaatatgagtggaccaataccaacgaccctgggcaacctgacacgcctggtcagcc 390 Query: 395 ttgacctctacaacaaccgtctcaccggcatgataccggcctcgctcgggaacatcggga 454 |||| |||||| |||||| ||||||||| ||||||| ||||||| ||| | |||| Sbjct: 391 ttgatctctacgacaaccatctcaccggagtgataccttcctcgcttggggcagttggga 450 Query: 455 cgctgcgtttcctgaggctgaatgggaacaagctgacaggaggtatacctgcgtcattgg 514 | ||||||||| ||||| || |||||||||| ||| |||| ||||||| ||||| |||| Sbjct: 451 cactgcgtttcttgaggttgcatgggaacaaactggcagggagtataccggcgtcgttgg 510 Query: 515 gcaatctaacgaagcttcaaactttggagcttcaggagaacatgctgaccggcatggtgc 574 || ||| ||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 511 gccgtctgacgaagcttgtcaagctggagcttcaggagaacatgctgagcggcacggtgc 570 Query: 575 cgctggatttcttatctcttgttctttttggggacttgactgaacttaacgttgccaaga 634 ||||||| || | || ||||||||| ||||||||||||||||||| || || ||||||| Sbjct: 571 cgctggagatcctctcacttgttcttgttggggacttgactgaactgaatgtcgccaaga 630 Query: 635 acagtctgtccggcactgtcaaatcatctaaaccaagagtagctacaatcatccaggaca 694 ||| ||| |||||||||||| |||||||||||||||||| ||||| ||||||| |||| Sbjct: 631 acaatcttgccggcactgtcatatcatctaaaccaagagtggctacggtcatccatgaca 690 Query: 695 cgctcaagactacacgctgagcagcagtgacaacctgaacttttgtaagaataaactgaa 754 |||||||||||||| ||||| || |||| |||||| |||||||||||||||||||| || Sbjct: 691 cgctcaagactacaagctgaacactagtggcaacctaaacttttgtaagaataaactaaa 750 Query: 755 tg 756 || Sbjct: 751 tg 752
>ref|NM_001074497.1| Oryza sativa (japonica cultivar-group) Os11g0514400 (Os11g0514400) mRNA, complete cds Length = 606 Score = 125 bits (63), Expect = 3e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 107 gcaacaccgaaggcgacatcctctacaggcaaaggcaggaactgaaggacatcaacaacg 166 ||||||| ||||| ||||| || ||| ||||||||||||| |||||||||||||||| | Sbjct: 68 gcaacactgaaggtgacattctgtacgcgcaaaggcaggaattgaaggacatcaacaatg 127 Query: 167 tgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||| ||||||||||||| || |||||||| |||||||||||| |||| ||||||||| Sbjct: 128 tgctggcgagctgggatccgacccttgtcaatccctgcacttgggtccacgtcacctgc 186
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06, complete sequence Length = 158842 Score = 117 bits (59), Expect = 8e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 135 gcaaaggcaggaactgaaggacatcaacaacgtgctgacgagctgggatcccacgcttgt 194 ||||||||||||| |||||||||||||||| |||||| ||||||||||||| || ||||| Sbjct: 116809 gcaaaggcaggaattgaaggacatcaacaatgtgctggcgagctgggatccgacccttgt 116750 Query: 195 caacccctgcacttggttccatgtcacctgc 225 ||| |||||||||||| |||| ||||||||| Sbjct: 116749 caatccctgcacttgggtccacgtcacctgc 116719 Score = 77.8 bits (39), Expect = 7e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 178 tgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcgacaac 237 |||||||| || ||||| || |||||||| |||||||||||||||||||||| ||||| Sbjct: 121072 tgggatccaacccttgtaaatccctgcacctggttccatgtcacctgcaacaataacaac 121013 Query: 238 tccgtcgtccg 248 ||||||||||| Sbjct: 121012 tccgtcgtccg 121002 Score = 42.1 bits (21), Expect = 3.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 477 tgggaacaagctgacaggaggtatacctgcgtcattgggcaatct 521 ||||||||| |||||||| | |||||| | |||||||||||||| Sbjct: 133220 tgggaacaacctgacaggggctatacccccatcattgggcaatct 133176
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 117 bits (59), Expect = 8e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 135 gcaaaggcaggaactgaaggacatcaacaacgtgctgacgagctgggatcccacgcttgt 194 ||||||||||||| |||||||||||||||| |||||| ||||||||||||| || ||||| Sbjct: 17827158 gcaaaggcaggaattgaaggacatcaacaatgtgctggcgagctgggatccgacccttgt 17827099 Query: 195 caacccctgcacttggttccatgtcacctgc 225 ||| |||||||||||| |||| ||||||||| Sbjct: 17827098 caatccctgcacttgggtccacgtcacctgc 17827068 Score = 77.8 bits (39), Expect = 7e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 178 tgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcgacaac 237 |||||||| || ||||| || |||||||| |||||||||||||||||||||| ||||| Sbjct: 17831421 tgggatccaacccttgtaaatccctgcacctggttccatgtcacctgcaacaataacaac 17831362 Query: 238 tccgtcgtccg 248 ||||||||||| Sbjct: 17831361 tccgtcgtccg 17831351 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 gaacatgctgaccggcatggtgccg 576 ||||| ||||||||||||||||||| Sbjct: 7027645 gaacaggctgaccggcatggtgccg 7027669 Score = 42.1 bits (21), Expect = 3.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 477 tgggaacaagctgacaggaggtatacctgcgtcattgggcaatct 521 ||||||||| |||||||| | |||||| | |||||||||||||| Sbjct: 17843569 tgggaacaacctgacaggggctatacccccatcattgggcaatct 17843525
>dbj|AK243599.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100084L14, full insert sequence Length = 994 Score = 87.7 bits (44), Expect = 7e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 178 tgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcgacaac 237 |||||||| || ||||| || |||||||| |||||||||||||||||||||| ||||| Sbjct: 183 tgggatccaacccttgtaaatccctgcacctggttccatgtcacctgcaacaataacaac 242 Query: 238 tccgtcgtccgagtggacttgggg 261 ||||||||||| ||||| |||||| Sbjct: 243 tccgtcgtccgcgtggatttgggg 266
>ref|NM_001074498.1| Oryza sativa (japonica cultivar-group) Os11g0514500 (Os11g0514500) mRNA, complete cds Length = 753 Score = 87.7 bits (44), Expect = 7e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 178 tgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcgacaac 237 |||||||| || ||||| || |||||||| |||||||||||||||||||||| ||||| Sbjct: 145 tgggatccaacccttgtaaatccctgcacctggttccatgtcacctgcaacaataacaac 204 Query: 238 tccgtcgtccgagtggacttgggg 261 ||||||||||| ||||| |||||| Sbjct: 205 tccgtcgtccgcgtggatttgggg 228
>ref|NM_001051113.1| Oryza sativa (japonica cultivar-group) Os01g0809300 (Os01g0809300) mRNA, complete cds Length = 1093 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 266 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 325 Query: 234 caac 237 |||| Sbjct: 326 caac 329
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 34372620 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 34372679 Query: 234 caac 237 |||| Sbjct: 34372680 caac 34372683 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 9920337 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 9920286
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 54964 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 55023 Query: 234 caac 237 |||| Sbjct: 55024 caac 55027
>gb|AF364178.1| Oryza sativa leucine-rich repeat protein mRNA, complete cds Length = 992 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 230 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 289 Query: 234 caac 237 |||| Sbjct: 290 caac 293
>gb|AF364177.1| Oryza sativa leucine-rich repeat protein mRNA, complete cds Length = 992 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 230 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 289 Query: 234 caac 237 |||| Sbjct: 290 caac 293
>gb|AF466358.1| Oryza sativa (japonica cultivar-group) floral organ regulator 1 (FOR1) mRNA, complete cds Length = 1019 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 228 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 287 Query: 234 caac 237 |||| Sbjct: 288 caac 291
>dbj|AK099315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K04, full insert sequence Length = 1031 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 265 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 324 Query: 234 caac 237 |||| Sbjct: 325 caac 328
>dbj|AK070798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064D14, full insert sequence Length = 1094 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 267 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 326 Query: 234 caac 237 |||| Sbjct: 327 caac 330
>gb|AY103715.1| Zea mays PCO067516 mRNA sequence Length = 1155 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacagcga 233 ||||||||| |||||||| |||||||||||||| |||||||| ||||||||| || |||| Sbjct: 335 gagctgggaccccacgctcgtcaacccctgcacctggttccacgtcacctgcgaccgcga 394 Query: 234 caac 237 |||| Sbjct: 395 caac 398
>gb|U62279.1|SBU62279 Sorghum bicolor leucine-rich repeat-containing extracellular glycoprotein mRNA, complete cds Length = 936 Score = 79.8 bits (40), Expect = 2e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 160 aacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtc 219 |||||||||||| ||||||| || | ||||||| ||| |||||||| |||||||||||| Sbjct: 132 aacaacgtgctgcagagctggaattcgacgcttgccaatccctgcacctggttccatgtc 191 Query: 220 acctgcaacagcgacaactccgtcgtccgagtggacttggggaatgca 267 |||||||||| | | |||| ||| |||| ||||| ||||| |||||| Sbjct: 192 acctgcaacaacaataactttgtcatccgcgtggatttgggcaatgca 239
>gb|BT008977.1| Triticum aestivum clone wdk2c.pk005.c18:fis, full insert mRNA sequence Length = 940 Score = 73.8 bits (37), Expect = 1e-09 Identities = 64/73 (87%) Strand = Plus / Plus Query: 165 cgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 ||||||| ||||||||| ||||| || |||||||||||||| |||||||| |||||||| Sbjct: 186 cgtgctgcagagctgggaccccaccctcgtcaacccctgcacctggttccacgtcacctg 245 Query: 225 caacagcgacaac 237 | || |||||||| Sbjct: 246 cgaccgcgacaac 258
>gb|BT009365.1| Triticum aestivum clone wlm96.pk027.l18:fis, full insert mRNA sequence Length = 1130 Score = 71.9 bits (36), Expect = 4e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||||||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 220 gagctgggatcccaccctcgtcaacccctgcacctggttccacgtcacctgc 271
>gb|AY736123.1| Triticum aestivum leucine-rich repeat protein mRNA, complete cds Length = 740 Score = 71.9 bits (36), Expect = 4e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||||||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 203 gagctgggatcccaccctcgtcaacccctgcacctggttccacgtcacctgc 254 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gtgaaccttcagtacctggagctgt 331 ||||| ||||||||||||||||||| Sbjct: 336 gtgaatcttcagtacctggagctgt 360
>dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16N13, TM0031, complete sequence Length = 97191 Score = 71.9 bits (36), Expect = 4e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 |||||||||| |||||||||||| |||||| || |||||||||||||||||| Sbjct: 24512 gagctgggatgccacgcttgtcagcccctgtacctggttccatgtcacctgc 24461
>emb|CT830112.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042N17, full insert sequence Length = 1048 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 165 cgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 ||||||| ||||||||| || || || |||||||||||||| ||||||||||||||||| Sbjct: 240 cgtgctgcagagctgggacccgaccctcgtcaacccctgcacctggttccatgtcacctg 299 Query: 225 c 225 | Sbjct: 300 c 300
>ref|NM_001056993.1| Oryza sativa (japonica cultivar-group) Os03g0440900 (Os03g0440900) mRNA, complete cds Length = 1085 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 165 cgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 ||||||| ||||||||| || || || |||||||||||||| ||||||||||||||||| Sbjct: 214 cgtgctgcagagctgggacccgaccctcgtcaacccctgcacctggttccatgtcacctg 273 Query: 225 c 225 | Sbjct: 274 c 274
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 165 cgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 ||||||| ||||||||| || || || |||||||||||||| ||||||||||||||||| Sbjct: 18442210 cgtgctgcagagctgggacccgaccctcgtcaacccctgcacctggttccatgtcacctg 18442269 Query: 225 c 225 | Sbjct: 18442270 c 18442270
>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence, complete sequence Length = 90673 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 165 cgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 ||||||| ||||||||| || || || |||||||||||||| ||||||||||||||||| Sbjct: 33046 cgtgctgcagagctgggacccgaccctcgtcaacccctgcacctggttccatgtcacctg 32987 Query: 225 c 225 | Sbjct: 32986 c 32986
>dbj|AK069710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031G03, full insert sequence Length = 1027 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 165 cgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 ||||||| ||||||||| || || || |||||||||||||| ||||||||||||||||| Sbjct: 277 cgtgctgcagagctgggacccgaccctcgtcaacccctgcacctggttccatgtcacctg 336 Query: 225 c 225 | Sbjct: 337 c 337
>dbj|AK061730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C03, full insert sequence Length = 1085 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 165 cgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 ||||||| ||||||||| || || || |||||||||||||| ||||||||||||||||| Sbjct: 214 cgtgctgcagagctgggacccgaccctcgtcaacccctgcacctggttccatgtcacctg 273 Query: 225 c 225 | Sbjct: 274 c 274
>emb|CT830223.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108B13, full insert sequence Length = 977 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 205 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 256
>ref|NM_001049285.1| Oryza sativa (japonica cultivar-group) Os01g0279800 (Os01g0279800) mRNA, complete cds Length = 993 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 205 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 256
>ref|NM_105841.3| Arabidopsis thaliana SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase (SERK1) mRNA, complete cds Length = 2565 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaaca 229 |||||||||||| ||||| || || || ||||| |||||||||||||| ||||||| Sbjct: 561 gagctgggatcctacgctagtgaatccttgcacatggttccatgtcacttgcaaca 616
>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 619 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 568
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 56103 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 56052
>dbj|AK061114.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E01, full insert sequence Length = 993 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 205 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 256
>dbj|AK059775.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A06, full insert sequence Length = 1009 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 205 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 256
>gb|AC012654.2|F14O23 Arabidopsis thaliana chromosome 1 BAC F14O23 sequence, complete sequence Length = 98471 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaaca 229 |||||||||||| ||||| || || || ||||| |||||||||||||| ||||||| Sbjct: 78407 gagctgggatcctacgctagtgaatccttgcacatggttccatgtcacttgcaaca 78462
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgc 225 ||||||||| || || || |||||||||||||| |||||||| ||||||||| Sbjct: 14830 gagctgggacccgaccctcgtcaacccctgcacctggttccacgtcacctgc 14779
>gb|AY226583.1| X Citrofortunella mitis leucine-rich repeat protein mRNA, complete cds Length = 1048 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggtt 212 ||||||||||||||| || ||||| |||||||||||||| Sbjct: 258 gagctgggatcccactctcgtcaatccctgcacttggtt 296
>gb|DQ118081.1| Nicotiana tabacum leucine rich repeat protein 1 mRNA, complete cds Length = 1004 Score = 50.1 bits (25), Expect = 0.016 Identities = 46/53 (86%) Strand = Plus / Plus Query: 178 tgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaacag 230 |||||||| || |||||||| || || |||||||| ||||| ||||||||||| Sbjct: 178 tgggatccaacccttgtcaatccttgtacttggtttcatgtgacctgcaacag 230
>gb|AY570507.1| Theobroma cacao somatic embryogenesis receptor-like kinase (SERK) mRNA, partial cds Length = 1402 Score = 50.1 bits (25), Expect = 0.016 Identities = 37/41 (90%) Strand = Plus / Plus Query: 178 tgggatcccacgcttgtcaacccctgcacttggttccatgt 218 |||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 157 tgggatcctacccttgtcaacccctgcacatggtttcatgt 197
>gb|AY048200.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 2462 Score = 48.1 bits (24), Expect = 0.061 Identities = 48/56 (85%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaaca 229 |||||||||||| | ||| || || || ||||| |||||||||||||| ||||||| Sbjct: 561 gagctgggatcctaggctagtgaatccttgcacatggttccatgtcacttgcaaca 616
>gb|BT002217.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 1878 Score = 48.1 bits (24), Expect = 0.061 Identities = 48/56 (85%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctgcaaca 229 |||||||||||| | ||| || || || ||||| |||||||||||||| ||||||| Sbjct: 144 gagctgggatcctaggctagtgaatccttgcacatggttccatgtcacttgcaaca 199
>emb|CR855164.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0523F07, complete sequence Length = 111824 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Minus Query: 160 aacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgt 218 ||||| |||||| ||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 91912 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgt 91854
>ref|NM_001059510.1| Oryza sativa (japonica cultivar-group) Os04g0457800 (Os04g0457800) mRNA, complete cds Length = 2296 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Plus Query: 160 aacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgt 218 ||||| |||||| ||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 347 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgt 405
>ref|NM_122117.2| Arabidopsis thaliana protein binding (AT5G21090) mRNA, complete cds Length = 1154 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 293 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 343
>gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic embryogenesis protein kinase 1 mRNA, complete cds Length = 2380 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Plus Query: 160 aacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgt 218 ||||| |||||| ||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 265 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgt 323
>gb|AY081542.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 945 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 147 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 197
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Minus Query: 160 aacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgt 218 ||||| |||||| ||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 22845587 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgt 22845529
>gb|BT006268.1| Arabidopsis thaliana At5g21090 mRNA, complete cds Length = 657 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 147 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 197
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Minus Query: 160 aacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgt 218 ||||| |||||| ||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 54362 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgt 54304
>gb|AF324989.2|AF324989 Arabidopsis thaliana AT5g21090 (AT5g21090/T10F18_120) mRNA, complete cds Length = 1053 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 283 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 333
>gb|AF370543.1|AF370543 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1141 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 293 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 343
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete sequence Length = 112600 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Minus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 110032 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 109982
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 caccgaaggcgacatcctctaca 133 ||||||||||||||||||||||| Sbjct: 16722 caccgaaggcgacatcctctaca 16744
>gb|BT002517.1| Arabidopsis thaliana Unknown protein (At5g21090) mRNA, complete cds Length = 1144 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 298 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 348
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome V, complete sequence Length = 84413 Score = 46.1 bits (23), Expect = 0.24 Identities = 44/51 (86%) Strand = Plus / Minus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgtcacctg 224 |||||||||||| || ||||| || || || || ||||||||||||||||| Sbjct: 45118 gagctgggatccaactcttgttaatccttgtacctggttccatgtcacctg 45068
>dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095F19, full insert sequence Length = 2296 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Plus Query: 160 aacaacgtgctgacgagctgggatcccacgcttgtcaacccctgcacttggttccatgt 218 ||||| |||||| ||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 347 aacaatgtgctgcagagttgggatcccactctggtcaatccatgcacatggttccatgt 405
>gb|AC187010.10| Canis Familiaris chromosome 11, clone XX-159O9, complete sequence Length = 220429 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Minus Query: 834 gagagaaaaagggaaaaagtgaaagg 859 ||||||||||||||||||| |||||| Sbjct: 118363 gagagaaaaagggaaaaagagaaagg 118338
>ref|NR_003266.1| Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein pseudogene (LOC220729) on chromosome 3 Length = 15309 Score = 44.1 bits (22), Expect = 0.96 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 atggcggctctgtccggagcag 61 |||||||||||||||||||||| Sbjct: 7389 atggcggctctgtccggagcag 7410
>gb|AC191161.3| Canis Familiaris chromosome 11, clone XX-2133I12, complete sequence Length = 36889 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Minus Query: 834 gagagaaaaagggaaaaagtgaaagg 859 ||||||||||||||||||| |||||| Sbjct: 25401 gagagaaaaagggaaaaagagaaagg 25376
>ref|NM_001063731.1| Oryza sativa (japonica cultivar-group) Os06g0225300 (Os06g0225300) mRNA, complete cds Length = 2437 Score = 44.1 bits (22), Expect = 0.96 Identities = 28/30 (93%) Strand = Plus / Plus Query: 195 caacccctgcacttggttccatgtcacctg 224 |||||| ||||| ||||||||||||||||| Sbjct: 579 caacccttgcacctggttccatgtcacctg 608
>ref|NM_001062444.1| Oryza sativa (japonica cultivar-group) Os05g0491400 (Os05g0491400) mRNA, complete cds Length = 951 Score = 44.1 bits (22), Expect = 0.96 Identities = 37/42 (88%) Strand = Plus / Plus Query: 196 aacccctgcacttggttccatgtcacctgcaacagcgacaac 237 ||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 239 aacccctgcacctggttccgcgtcacctgcaacgccgacaac 280
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 44.1 bits (22), Expect = 0.96 Identities = 37/42 (88%) Strand = Plus / Minus Query: 196 aacccctgcacttggttccatgtcacctgcaacagcgacaac 237 ||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 74601 aacccctgcacctggttccgcgtcacctgcaacgccgacaac 74560
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 44.1 bits (22), Expect = 0.96 Identities = 37/42 (88%) Strand = Plus / Plus Query: 196 aacccctgcacttggttccatgtcacctgcaacagcgacaac 237 ||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 6287 aacccctgcacctggttccgcgtcacctgcaacgccgacaac 6328
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.96 Identities = 28/30 (93%) Strand = Plus / Minus Query: 195 caacccctgcacttggttccatgtcacctg 224 |||||| ||||| ||||||||||||||||| Sbjct: 6498670 caacccttgcacctggttccatgtcacctg 6498641
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 0.96 Identities = 37/42 (88%) Strand = Plus / Minus Query: 196 aacccctgcacttggttccatgtcacctgcaacagcgacaac 237 ||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 24006112 aacccctgcacctggttccgcgtcacctgcaacgccgacaac 24006071
>dbj|AP007293.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34C12, TM0361, complete sequence Length = 108947 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Minus Query: 834 gagagaaaaagggaaaaagtgaaagg 859 |||||||||| ||||||||||||||| Sbjct: 40300 gagagaaaaaaggaaaaagtgaaagg 40275
>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164595 Score = 44.1 bits (22), Expect = 0.96 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 atggcggctctgtccggagcag 61 |||||||||||||||||||||| Sbjct: 150480 atggcggctctgtccggagcag 150501
>gb|AC006038.3| Homo sapiens BAC clone RP11-299C5 from 2, complete sequence Length = 184950 Score = 44.1 bits (22), Expect = 0.96 Identities = 22/22 (100%) Strand = Plus / Plus Query: 938 ttatccgttttgtatattcata 959 |||||||||||||||||||||| Sbjct: 51526 ttatccgttttgtatattcata 51547
>gb|AC007131.4| Homo sapiens BAC clone RP11-179A20 from 2, complete sequence Length = 160087 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Plus Query: 838 gaaaaagggaaaaagtgaaaggtgat 863 |||||||||||||||||| ||||||| Sbjct: 63682 gaaaaagggaaaaagtgagaggtgat 63707
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 44.1 bits (22), Expect = 0.96 Identities = 28/30 (93%) Strand = Plus / Minus Query: 195 caacccctgcacttggttccatgtcacctg 224 |||||| ||||| ||||||||||||||||| Sbjct: 15046 caacccttgcacctggttccatgtcacctg 15017
>dbj|AP006659.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L15, TM0344, complete sequence Length = 87645 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Minus Query: 834 gagagaaaaagggaaaaagtgaaagg 859 |||||||||| ||||||||||||||| Sbjct: 26079 gagagaaaaaaggaaaaagtgaaagg 26054
>dbj|AK107986.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F01, full insert sequence Length = 959 Score = 44.1 bits (22), Expect = 0.96 Identities = 37/42 (88%) Strand = Plus / Plus Query: 196 aacccctgcacttggttccatgtcacctgcaacagcgacaac 237 ||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 247 aacccctgcacctggttccgcgtcacctgcaacgccgacaac 288
>dbj|AK100258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B01, full insert sequence Length = 2438 Score = 44.1 bits (22), Expect = 0.96 Identities = 28/30 (93%) Strand = Plus / Plus Query: 195 caacccctgcacttggttccatgtcacctg 224 |||||| ||||| ||||||||||||||||| Sbjct: 580 caacccttgcacctggttccatgtcacctg 609
>dbj|AK065224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002G23, full insert sequence Length = 2174 Score = 44.1 bits (22), Expect = 0.96 Identities = 28/30 (93%) Strand = Plus / Plus Query: 195 caacccctgcacttggttccatgtcacctg 224 |||||| ||||| ||||||||||||||||| Sbjct: 241 caacccttgcacctggttccatgtcacctg 270
>dbj|AP006413.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301d, complete sequence Length = 25607 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Minus Query: 834 gagagaaaaagggaaaaagtgaaagg 859 |||||||||| ||||||||||||||| Sbjct: 5958 gagagaaaaaaggaaaaagtgaaagg 5933
>dbj|AP006390.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT04O07, TM0264, complete sequence Length = 52203 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Plus Query: 834 gagagaaaaagggaaaaagtgaaagg 859 |||||||||| ||||||||||||||| Sbjct: 48757 gagagaaaaaaggaaaaagtgaaagg 48782
>gb|AC183796.4| Pan troglodytes BAC clone CH251-638K14 from chromosome 1, complete sequence Length = 195863 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 aattgggacaaatggtgaacc 313 ||||||||||||||||||||| Sbjct: 18586 aattgggacaaatggtgaacc 18566
>ref|XM_416174.2| PREDICTED: Gallus gallus similar to DRIM protein (LOC417933), mRNA Length = 8560 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 agcttcctccttgcagcaatg 42 ||||||||||||||||||||| Sbjct: 8276 agcttcctccttgcagcaatg 8256
>dbj|AK243563.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100080K24, full insert sequence Length = 4184 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 gaacatgctgaccggcatggtgccg 576 ||||| ||||||||||||||||||| Sbjct: 1209 gaacaggctgaccggcatggtgccg 1233
>ref|NM_001074500.1| Oryza sativa (japonica cultivar-group) Os11g0514700 (Os11g0514700) mRNA, complete cds Length = 756 Score = 42.1 bits (21), Expect = 3.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 477 tgggaacaagctgacaggaggtatacctgcgtcattgggcaatct 521 ||||||||| |||||||| | |||||| | |||||||||||||| Sbjct: 450 tgggaacaacctgacaggggctatacccccatcattgggcaatct 494
>ref|NM_001074094.1| Oryza sativa (japonica cultivar-group) Os11g0233800 (Os11g0233800) mRNA, complete cds Length = 3186 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 gaacatgctgaccggcatggtgccg 576 ||||| ||||||||||||||||||| Sbjct: 1137 gaacaggctgaccggcatggtgccg 1161
>tpg|BK004115.1| TPA_exp: Coprinopsis cinerea okayama7#130 laccase 5 (lcc5) gene, complete cds Length = 4155 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggcaacaccgaaggcgacatc 126 ||||||||||||||||||||| Sbjct: 1824 ggcaacaccgaaggcgacatc 1844
>gb|DQ226510.1| Thellungiella halophila clone ThBAC2 hypothetical protein genes, complete cds; transposon En/Spm, complete sequence; transposon Gypsy, complete sequence; and transposon AC-like element, complete sequence Length = 82919 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 749 actgaatgtcttttccttctg 769 ||||||||||||||||||||| Sbjct: 76891 actgaatgtcttttccttctg 76911
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 atcgggacgctgcgtttcctg 468 ||||||||||||||||||||| Sbjct: 1009873 atcgggacgctgcgtttcctg 1009853
>gb|AY791293.2| Cocos nucifera somatic embryogenesis receptor kinase mRNA, complete cds Length = 1890 Score = 42.1 bits (21), Expect = 3.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 174 gagctgggatcccacgcttgtcaacccctgcacttggttccatgt 218 |||||||||||| || || ||||| || ||||| ||||||||||| Sbjct: 150 gagctgggatccgactctggtcaatccatgcacatggttccatgt 194
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 gaacatgctgaccggcatggtgccg 576 ||||| ||||||||||||||||||| Sbjct: 152903 gaacaggctgaccggcatggtgccg 152927
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19, complete sequence Length = 139052 Score = 42.1 bits (21), Expect = 3.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 477 tgggaacaagctgacaggaggtatacctgcgtcattgggcaatct 521 ||||||||| |||||||| | |||||| | |||||||||||||| Sbjct: 4760 tgggaacaacctgacaggggctatacccccatcattgggcaatct 4716
>gb|AC131980.9| Mus musculus chromosome 1, clone RP24-170O7, complete sequence Length = 200100 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 835 agagaaaaagggaaaaagtgaaagg 859 |||||||||||||||||| |||||| Sbjct: 182887 agagaaaaagggaaaaagggaaagg 182911
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctcgtcctcgccggtctcctt 84 ||||||||||||||||||||| Sbjct: 121162 ctcgtcctcgccggtctcctt 121142
>gb|DQ057577.1| Antonospora locustae clone 3n06 mRNA sequence Length = 1064 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 744 aataaactgaatgtcttttcc 764 ||||||||||||||||||||| Sbjct: 1007 aataaactgaatgtcttttcc 1027
>gb|DQ057554.1| Antonospora locustae clone 2l02 mRNA sequence Length = 1168 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 744 aataaactgaatgtcttttcc 764 ||||||||||||||||||||| Sbjct: 1131 aataaactgaatgtcttttcc 1151
>gb|AC162387.9| Mus musculus 10 BAC RP24-178D16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165829 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 835 agagaaaaagggaaaaagtgaaagg 859 |||||||||||||||||| |||||| Sbjct: 57249 agagaaaaagggaaaaagggaaagg 57273
>dbj|AK080805.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230212B15 product:GTP-binding protein rab13 (fragment) homolog [Rattus norvegicus], full insert sequence Length = 1397 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctcgtcctcgccggtctcctt 84 ||||||||||||||||||||| Sbjct: 730 ctcgtcctcgccggtctcctt 710
>ref|NM_026677.1| Mus musculus RAB13, member RAS oncogene family (Rab13), mRNA dbj|AK002303.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610007N03 product:RAB13, MEMBER RAS ONCOGENE FAMILY homolog [Homo sapiens], full insert sequence Length = 1073 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctcgtcctcgccggtctcctt 84 ||||||||||||||||||||| Sbjct: 827 ctcgtcctcgccggtctcctt 807
>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence Length = 131919 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctcgtcctcgccggtctcctt 84 ||||||||||||||||||||| Sbjct: 45466 ctcgtcctcgccggtctcctt 45486
>emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on chromosome 1 Contains the 3' end of a novel gene (FLJ40773) and two novel genes, complete sequence Length = 175463 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 aattgggacaaatggtgaacc 313 ||||||||||||||||||||| Sbjct: 152108 aattgggacaaatggtgaacc 152088
>emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 in linkage group 8, complete sequence Length = 174723 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 835 agagaaaaagggaaaaagtga 855 ||||||||||||||||||||| Sbjct: 12235 agagaaaaagggaaaaagtga 12255
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 892 tttgtaatgatgaatcttcat 912 ||||||||||||||||||||| Sbjct: 102868 tttgtaatgatgaatcttcat 102848
>gb|AC157020.8| Mus musculus 10 BAC RP24-459C13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183687 Score = 42.1 bits (21), Expect = 3.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 835 agagaaaaagggaaaaagtgaaagg 859 |||||||||||||||||| |||||| Sbjct: 152350 agagaaaaagggaaaaagggaaagg 152374
>gb|AC016957.49| Homo sapiens 12 BAC RP11-50I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 50743 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 839 aaaaagggaaaaagtgaaagg 859 ||||||||||||||||||||| Sbjct: 44982 aaaaagggaaaaagtgaaagg 44962
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctcgtcctcgccggtctcctt 84 ||||||||||||||||||||| Sbjct: 91430 ctcgtcctcgccggtctcctt 91410
>gb|AC011995.8| Homo sapiens BAC clone RP11-163G21 from 2, complete sequence Length = 151605 Score = 42.1 bits (21), Expect = 3.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 832 aggagagaaaaagggaaaaagtgaaaggt 860 ||||||||| ||||||||||| ||||||| Sbjct: 43195 aggagagaagaagggaaaaagagaaaggt 43223
>emb|AL935207.6| Zebrafish DNA sequence from clone CH211-251J8, complete sequence Length = 146351 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 ttttgtaagaataaactgaat 755 ||||||||||||||||||||| Sbjct: 101834 ttttgtaagaataaactgaat 101814
>gb|BC027214.1| Mus musculus RAB13, member RAS oncogene family, mRNA (cDNA clone MGC:25544 IMAGE:3709140), complete cds Length = 1118 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctcgtcctcgccggtctcctt 84 ||||||||||||||||||||| Sbjct: 853 ctcgtcctcgccggtctcctt 833
>ref|XM_665700.1| Plasmodium berghei strain ANKA hypothetical protein (PB404897.00.0) partial mRNA Length = 293 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 aaaaagtgaaaggtgatttaa 867 ||||||||||||||||||||| Sbjct: 197 aaaaagtgaaaggtgatttaa 217
>ref|XM_725532.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02709) partial mRNA Length = 9582 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 aaaaagtgaaaggtgatttaa 867 ||||||||||||||||||||| Sbjct: 1637 aaaaagtgaaaggtgatttaa 1657 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 173,146,327 Number of extensions: 9417918 Number of successful extensions: 220364 Number of sequences better than 10.0: 106 Number of HSP's gapped: 220360 Number of HSP's successfully gapped: 116 Length of query: 1003 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 980 Effective length of database: 18,503,978,556 Effective search space: 18133898984880 Effective search space used: 18133898984880 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)