| Clone Name | FLbaf33n20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120362:Os08g0531200 | 30 | 4.9 | 2 | AK111902:Os08g0126700 | 30 | 4.9 | 3 | AK111805:Os08g0126700 | 30 | 4.9 | 4 | AK062594:Os07g0187900 | 30 | 4.9 | 5 | AK068480:Os02g0137400 | 30 | 6.3 |
|---|
>AK120362:Os08g0531200 | Length = 892 Score = 30.4 bits (67), Expect = 4.9 Identities = 18/76 (23%), Positives = 33/76 (43%) Frame = +1 Query: 1750 TEGSSTCSSGANFIGLDKPNDGVTSKNFSQLSGGNNMGHTTGWCHTADMSSPSQTTDSAR 1929 T +ST + ++PN G F Q N + T WC++ + + T + Sbjct: 321 TASTSTPTEVTKIYCNEQPNQGAADNEFGQKRKRNPIIVTPAWCYS---EATTGTLQHEQ 377 Query: 1930 NQQMNSNAAR*LNLYE 1977 N +SN AR ++++ Sbjct: 378 NSSSHSNGARSYDIWK 393
>AK111902:Os08g0126700 | Length = 604 Score = 30.4 bits (67), Expect = 4.9 Identities = 21/82 (25%), Positives = 37/82 (45%) Frame = +3 Query: 1185 TLASLPVTLVGQIPRDLQAPAEITEQMRNGRRPLNLTRSGVTGNGKLLLVHGYCANGNPF 1364 ++ASLP + + LQA +TE R+G+ +LTR ++ K+ ++ + Sbjct: 285 SIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRL-LSRLNKIRVIERPHGQHSVV 343 Query: 1365 TASDFTNYLEFNDPNANRNLDT 1430 A D Y++F DT Sbjct: 344 LAEDAAKYMDFRGGGGGGGGDT 365
>AK111805:Os08g0126700 | Length = 604 Score = 30.4 bits (67), Expect = 4.9 Identities = 21/82 (25%), Positives = 37/82 (45%) Frame = +3 Query: 1185 TLASLPVTLVGQIPRDLQAPAEITEQMRNGRRPLNLTRSGVTGNGKLLLVHGYCANGNPF 1364 ++ASLP + + LQA +TE R+G+ +LTR ++ K+ ++ + Sbjct: 285 SIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRL-LSRLNKIRVIERPHGQHSVV 343 Query: 1365 TASDFTNYLEFNDPNANRNLDT 1430 A D Y++F DT Sbjct: 344 LAEDAAKYMDFRGGGGGGGGDT 365
>AK062594:Os07g0187900 | Length = 253 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = +1 Query: 1747 TTEGSSTCSSGANFIGLDKPNDGVTSKNFSQLSGGNNMGHTTGWCHTADMSSPSQTTDSA 1926 T G+ T SS ++ G S SGG + G WC A SSP+ T S+ Sbjct: 15 TRRGAPTPSSPSSASGTTPAASPPASPRRRSSSGGASRGR---WCSPASSSSPAPATSSS 71 Query: 1927 RN 1932 R+ Sbjct: 72 RS 73 Score = 30.0 bits (66), Expect = 6.3 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -2 Query: 796 PASVSVKAPAKVPSFTSPSLWR-PSSNIGMLISSPSGSTTK 677 P+S A + P T+ + WR PS+ SSP GSTT+ Sbjct: 99 PSSPRCSASSTTPRSTTSAAWRAPSAPTSSTSSSPGGSTTR 139
>AK068480:Os02g0137400 | Length = 858 Score = 30.0 bits (66), Expect = 6.3 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%) Frame = +3 Query: 642 LGNSNFILSLETFVVDPDGEEINIPMFDDGLHN---DGDVNDGTFAGALTLTEAGSYVLE 812 + +S F+ + + V GE+ + + +G+ + DG VN+ G T+T+ GS L+ Sbjct: 132 VSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDGRVNEWRTPGKKTITKVGSNRLQ 191 Query: 813 TVATGVDPNGNYISRSTMNYFSAVKSDLQIAYATATVDGDVAEIAI 950 V +S + YF + + + GDVA +AI Sbjct: 192 VVIA--------LSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAI 229 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 49,691,170 Number of extensions: 1035386 Number of successful extensions: 2895 Number of sequences better than 10.0: 5 Number of HSP's gapped: 2893 Number of HSP's successfully gapped: 6 Length of query: 670 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 563 Effective length of database: 11,115,468 Effective search space: 6258008484 Effective search space used: 6258008484 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)