>P34090:CMF_DICDI Conditioned medium factor - Dictyostelium discoideum (Slime mold)|
          Length = 571
 Score =  152 bits (385), Expect(2) = 1e-56
 Identities = 120/396 (30%), Positives = 189/396 (47%), Gaps = 40/396 (10%)
 Frame = +3

Query: 396  PTTCYSFDAPKIGSWSFQVTNTDSVSKLNIRHSKK---GTPVL-----QPSG---YIYVN 542
            P+   ++D P +G W+  +T T S+ K N +  K     TP L      PS    Y YV+
Sbjct: 12   PSFSLTWDKPVVGDWNVVITATSSLRK-NEKFQKMVEDSTPQLLMLVQNPSDTHIYSYVS 70

Query: 543  NDS--------PYVLKTYSTEDLLXXXXXXXXXXXXXXNALLGNSNFILSLETFVVDPDG 698
            + +          +   +   + +                LL +    +S E  +  PDG
Sbjct: 71   SYNNLFTGQKVSVLAMLHKKSEFIKKSSANRPLNWKPSPILLSD----VSAEMILGLPDG 126

Query: 699  EEINIPMFDDGLHNDGDVNDGTFAGALTLTEAGSYVLETVATGVDPNGNYISRSTMNYFS 878
             +  IPMFDDGLH+D   NDG F G + ++E G++ L+ V  G   NGN + RS  +   
Sbjct: 127  SKETIPMFDDGLHDDEQANDGLFGGYINVSELGNHDLQVVYKG-SQNGNGVIRSNQHLIP 185

Query: 879  AVKSDLQIAYATATVDGDVAEIAIKYTGSEAGVTN-----YLAYAEVWGTSSTGSEVPVA 1043
                 L++     +V    A + I +  +    T         Y+EV+GT   G +V +A
Sbjct: 186  ITSQYLELTGEVQSVQDGDANLNIYFIVNSPNQTTVDQTPVHVYSEVYGTDDDGKKVAIA 245

Query: 1044 WVSAISDA--------SSDIQLELDLAWVAKANAIAPFTLKNVRIQDSNIQTVLT-TLAS 1196
            WV+ ++ A        +  +   L+  W+AK  A APF +KNV++ D +    L+ T ++
Sbjct: 246  WVAGVTSAQPIQGSTTTFALSAVLNERWIAKVGATAPFFVKNVQVSDLDTFIPLSNTTST 305

Query: 1197 LPVTLVGQ---IPRDLQAPA--EITEQMRNGRRPLNLT-RSG-VTGNGKLLLVHGYCANG 1355
              V +VG+   +   + +P   EIT++MR+G+ P  L  R G  TGNGKL+L HGYC+ G
Sbjct: 306  SNVKMVGEYKDVRTIVHSPPLHEITKEMRDGKMPKELADRIGKSTGNGKLILTHGYCSEG 365

Query: 1356 NPFTASDFTNYLEFNDPNANRNLDTFANLILDFAEK 1463
              +   DF N +EF D N NR  D FA ++ +F  +
Sbjct: 366  -VWPIEDFENSVEFQDFNQNRGNDEFAQILANFGSQ 400



 Score = 89.7 bits (221), Expect(2) = 1e-56
 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
 Frame = +1

Query: 1513 ASLHLASYYWSGLDVASG--GRLIQSVGSPYQXXXXXXXXXXXXXXXXXXXXXNDGLTKS 1686
            A+LHL ++Y+SGLD++    GR+IQS+G+PYQ                     ND LT  
Sbjct: 416  AALHLVTFYFSGLDLSQKLEGRVIQSMGTPYQGTALAGTWASIGSAVGVGCSANDDLTVD 475

Query: 1687 GAQKWLSGIPAEKQAKVYYWTTEGSSTCSSGANFIGLDKPNDGVTSK-------NFSQLS 1845
            GA  WL  IPA+K+A VY  TT+ S+   S  N+  L    D   ++         + L 
Sbjct: 476  GAALWLKSIPADKRALVYLSTTQYST--GSLINYCNLASNADLRMAEMMVLWIIGHTPLE 533

Query: 1846 GGNNMGHTTGWCHTADMSSPSQTTDSARNQQMNSNA 1953
            GG  + +   WCH+  M SP QTT++  N++M+SN+
Sbjct: 534  GGVYLNNFKDWCHSDGMHSPQQTTNTEYNKEMSSNS 569

>Q03674:PLB2_YEAST Lysophospholipase 2 precursor - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 706

 Score = 35.0 bits (79), Expect = 1.2
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +1

Query: 1756 GSSTCSSGANFIGLDKPNDGVTSKNFSQLSGGNNMGHTTGWCHTADMSSPSQTTDSARNQ 1935
            G+ST  SGA    + +  DG+     + L G +  G+TT    T+  S+ +  ++S+ N 
Sbjct: 597  GNSTYQSGAIASAISEATDGIP---ITALLGSSTSGNTTSNSTTSTSSNVTSNSNSSSNT 653

Query: 1936 QMNSNAA 1956
             +NSN++
Sbjct: 654  TLNSNSS 660

>P14933:YP60_METTM Hypothetical 60.5 kDa protein - Methanobacterium|
           thermoautotrophicum (strain Marburg / DSM 2133)
          Length = 531

 Score = 34.3 bits (77), Expect = 2.0
 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = +3

Query: 738 NDGDVNDGTFAGALTLTEAGSYVLETVAT---GVDPNGNYISRSTMNYFSAVKSDLQIAY 908
           N GD +D      L LT AGS V   V +   G +P+         NY+S V  DLQ  Y
Sbjct: 386 NHGDKHD------LVLTRAGSIVGNRVNSENKGSEPSDEMTCFPQKNYYSGVGGDLQAEY 439

Query: 909 ATATVDGD 932
             A   GD
Sbjct: 440 TDAMARGD 447

>P07856:SERI1_BOMMO Sericin 1 precursor - Bombyx mori (Silk moth)|
          Length = 1186

 Score = 33.9 bits (76), Expect = 2.6
 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
 Frame = +1

Query: 1672 GLTKSGAQK-----WLSGIPAEKQAKVYYWTTEGSSTCSSGANFIGLDKPNDGVTSKNFS 1836
            G TKSGA        +SG      +  ++W    SS+ SS A+         G +  + S
Sbjct: 519  GATKSGASSSTQATTVSGADDSADSYTWWWNPRRSSSSSSSASSSSSGSNVGGSSQSSGS 578

Query: 1837 QLSGGNNMGH-----TTGWCHTADMSSPS 1908
              SG N  GH     +TG     D SS S
Sbjct: 579  STSGSNARGHLGTVSSTGSTSNTDSSSKS 607

>O78708:NU1M_VOMUR NADH-ubiquinone oxidoreductase chain 1 - Vombatus ursinus (Common|
            wombat)
          Length = 318

 Score = 33.5 bits (75), Expect = 3.4
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
 Frame = +3

Query: 993  YAEVWGTSSTGSEVPVAWVSAISDASSDIQLELDLAWVAKANAI--APFTLKNVRIQDSN 1166
            Y+ +W  S   S    A + A+   +  I  E+ LA +  +  +    FTLKN+ I   N
Sbjct: 114  YSILW--SGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQEN 171

Query: 1167 IQTVLTTLASLPVTLVGQIPRDLQAPAEITE 1259
            ++ ++TT     +  V  +    +AP ++TE
Sbjct: 172  MELIVTTWPLAMMWYVSTLAETNRAPFDLTE 202

>Q4FNK3:ARLY_PELUB Argininosuccinate lyase - Pelagibacter ubique|
          Length = 462

 Score = 33.1 bits (74), Expect = 4.5
 Identities = 27/101 (26%), Positives = 44/101 (43%)
 Frame = +3

Query: 1164 NIQTVLTTLASLPVTLVGQIPRDLQAPAEITEQMRNGRRPLNLTRSGVTGNGKLLLVHGY 1343
            N+ ++LT L  LP++    +  D +   +  E + N    LN     +  N + +L    
Sbjct: 308  NLFSMLTILKGLPISYFKDLQDDKEILFKSNEILNNSIAILNEVLKNLKPNKQQMLD--- 364

Query: 1344 CANGNPFTASDFTNYLEFNDPNANRNLDTFANLILDFAEKK 1466
             AN    TA+D  +YL  N     R        I+++AEKK
Sbjct: 365  LANSGYITATDLADYLVKNHSMPFRKAYQTTASIVNYAEKK 405

>Q8JZM8:MUC4_MOUSE Mucin-4 precursor - Mus musculus (Mouse)|
          Length = 3443

 Score = 32.3 bits (72), Expect = 7.6
 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
 Frame = +3

Query: 969  AGVTNYLAYAEVWGTSSTGSEVPVAWVSAISDASSDIQLELDLAWVAKANAIAP-FTLKN 1145
            A  TN++A+A  + TSS  S + V W    SD    +     +A+  +   + P F    
Sbjct: 2761 AKATNFIAFAAQYNTSSLKSPITVQWFLEPSDKIRVVYNNQTVAFNTRDTEVLPIFNTTG 2820

Query: 1146 VRIQDSNIQTVLTTLASLPVTLVGQIPRDLQAPAEITEQMRN 1271
            V +  +  Q       ++ ++++ +    L A + ++E+ RN
Sbjct: 2821 VLLTQNGSQVSANFDGTVTISVIAR-SNILHASSSLSEEYRN 2861

>O78707:NU1M_TRIVU NADH-ubiquinone oxidoreductase chain 1 - Trichosurus vulpecula|
            (Brush-tailed possum)
          Length = 318

 Score = 32.0 bits (71), Expect = 9.9
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
 Frame = +3

Query: 993  YAEVWGTSSTGSEVPVAWVSAISDASSDIQLELDLAWVAKANAI--APFTLKNVRIQDSN 1166
            Y+ +W  S   S    A + A+   +  I  E+ LA +  +  +    FTLKN+ I   N
Sbjct: 114  YSILW--SGWASNTKYALMGALRAVAQTISYEVTLAIILLSIMLINGSFTLKNLIITQEN 171

Query: 1167 IQTVLTTLASLPVTLVGQIPRDLQAPAEITE 1259
            +  ++TT     +  +  +    +AP ++TE
Sbjct: 172  MWLIMTTWPLTMMWYISTLAETNRAPFDLTE 202


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 314,445,690
Number of extensions: 6456471
Number of successful extensions: 18035
Number of sequences better than 10.0: 8
Number of HSP's gapped: 18009
Number of HSP's successfully gapped: 9
Length of query: 670
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 550
Effective length of database: 67,771,039
Effective search space: 37274071450
Effective search space used: 37274071450
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)