ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf27o13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072992:Os05g0509900 | 409 | e-114 | 2 | AK103491:Os01g0772200 | 391 | e-109 | 3 | AK060471:Os01g0772200 | 195 | 6e-50 | 4 | Os01g0161000:Os01g0161000 | 32 | 0.64 | 5 | AK120860:Os03g0684100 | 31 | 1.4 | 6 | AK068344:Os02g0761700 | 30 | 2.4 | 7 | AK110124: | 30 | 3.2 | 8 | Os02g0805400:Os02g0805400 | 29 | 5.4 | 9 | AY271618:Os01g0609300 | 29 | 5.4 | 10 | AK119824:Os06g0675700 | 29 | 5.4 | 11 | AK100296:Os01g0704700 | 29 | 5.4 | 12 | AK100135:Os01g0609300 | 29 | 5.4 | 13 | AK105182:Os03g0438200 | 29 | 7.1 | 14 | Os07g0278800:Os07g0278800 | 28 | 9.2 | 15 | Os02g0678300:Os02g0678300 | 28 | 9.2 | 16 | Os07g0527800:Os07g0527800 | 28 | 9.3 | 17 | Os04g0543500:Os04g0543500 | 28 | 9.3 | 18 | AK110310:Os12g0608500 | 28 | 9.3 | 19 | AK107367:Os12g0608500 | 28 | 9.3 | 20 | AK102027:Os12g0249900 | 28 | 9.3 | 21 | AK069352:Os02g0522800 | 28 | 9.3 |
|---|
>AK072992:Os05g0509900 | Length = 259 Score = 409 bits (1051), Expect = e-114 Identities = 207/259 (79%), Positives = 222/259 (85%), Gaps = 2/259 (0%) Frame = +2 Query: 125 MGDEAKYLETARADRSVWLMKCPPVVXXXXXXXXXXXXXX--NPNPVVAKVVLSLDPLSS 298 MG+EAKYLETARA+RSVWLMKCPPVV NPNPVVAKVVLSLD L S Sbjct: 1 MGEEAKYLETARAERSVWLMKCPPVVSHAWQGAVSSSDAAGSNPNPVVAKVVLSLDLLRS 60 Query: 299 AEPSLQFKMEMSQTSVASTCNLPKSYSLNMFKDFVPMCVFSETNQGKLSCEGKVEHKFDM 478 EPSLQFKMEM+QT+ T N PKSYSLNM KDFVPMCVFSE+NQGKLSCEGKVEHKFDM Sbjct: 61 EEPSLQFKMEMAQTN---TGNTPKSYSLNMSKDFVPMCVFSESNQGKLSCEGKVEHKFDM 117 Query: 479 EPHKDNLLNYAKLCRERTQKSMVKTRKVQVLDNDHGMSMRPMPGMVGLISSSSKEKRKPT 658 +PH DNL+NY KLCRERTQKSM+KTRKVQV++ DH MS+ P+PGMVGLI S SKEK+K T Sbjct: 118 KPHSDNLVNYGKLCRERTQKSMIKTRKVQVIE-DHRMSLIPLPGMVGLIPSGSKEKKKQT 176 Query: 659 PTKPSDVKRTRRDRRELENIIFKLFEKQPNWALKALVQETDQPEQFLKEILNDLCMYNKR 838 PTKPSD KR RRDRRELENIIFKLFE+QPNWALKALVQETDQPEQFLKEILNDLC YNKR Sbjct: 177 PTKPSDAKRIRRDRRELENIIFKLFERQPNWALKALVQETDQPEQFLKEILNDLCFYNKR 236 Query: 839 GPNQGTHELKPEYKKSSED 895 GPNQGTHELKPEYKKS+ D Sbjct: 237 GPNQGTHELKPEYKKSTGD 255
>AK103491:Os01g0772200 | Length = 277 Score = 391 bits (1004), Expect = e-109 Identities = 197/275 (71%), Positives = 219/275 (79%), Gaps = 17/275 (6%) Frame = +2 Query: 125 MGDEAKYLETARADRSVWLMKCPPVVXXXXXXXXXXXXXX----------------NPNP 256 M +EAK LETARADRSVWLMKCP VV NPNP Sbjct: 1 MAEEAKNLETARADRSVWLMKCPTVVSRAWQEAATAAASSSSSSDAAAGANSNSNANPNP 60 Query: 257 VVAKVVLSLDPLSSAEPSLQFKMEMSQTSVASTCNLPKSYSLNMFKDFVPMCVFSETNQG 436 VVAKV++SLDPL S + LQFKMEM+QT +T PKSYSLNMFKDFVPMCVFSE+NQG Sbjct: 61 VVAKVIVSLDPLRSEDQQLQFKMEMAQTGNGNT---PKSYSLNMFKDFVPMCVFSESNQG 117 Query: 437 KLSCEGKVEHKFDMEPHKDNLLNYAKLCRERTQKSMVKTRKVQVLDNDHGMSMRPMPGMV 616 KLSCEGKV HKFDMEPH DNL+NY KLCRERTQKSM+K RK+ VL ND+GMSMRP+PG+V Sbjct: 118 KLSCEGKVGHKFDMEPHSDNLVNYGKLCRERTQKSMIKNRKLMVLANDNGMSMRPLPGLV 177 Query: 617 GLISSSSKEK-RKPTPTKPSDVKRTRRDRRELENIIFKLFEKQPNWALKALVQETDQPEQ 793 GL+SS K+K +KP P KPSD+KRTRRDRRELENI+FKLFE+QPNW+LK L+QETDQPEQ Sbjct: 178 GLMSSGPKQKEKKPLPVKPSDMKRTRRDRRELENILFKLFERQPNWSLKNLMQETDQPEQ 237 Query: 794 FLKEILNDLCMYNKRGPNQGTHELKPEYKKSSEDA 898 FLKEILNDLC YNKRGPNQGTHELKPEYKKS+EDA Sbjct: 238 FLKEILNDLCFYNKRGPNQGTHELKPEYKKSTEDA 272
>AK060471:Os01g0772200 | Length = 117 Score = 195 bits (495), Expect = 6e-50 Identities = 92/112 (82%), Positives = 104/112 (92%), Gaps = 1/112 (0%) Frame = +2 Query: 566 VLDNDHGMSMRPMPGMVGLISSSSKEK-RKPTPTKPSDVKRTRRDRRELENIIFKLFEKQ 742 VL ND+GMSMRP+PG+VGL+SS K+K +KP P KPSD+KRTRRDRRELENI+FKLFE+Q Sbjct: 1 VLANDNGMSMRPLPGLVGLMSSGPKQKEKKPLPVKPSDMKRTRRDRRELENILFKLFERQ 60 Query: 743 PNWALKALVQETDQPEQFLKEILNDLCMYNKRGPNQGTHELKPEYKKSSEDA 898 PNW+LK L+QETDQPEQFLKEILNDLC YNKRGPNQGTHELKPEYKKS+EDA Sbjct: 61 PNWSLKNLMQETDQPEQFLKEILNDLCFYNKRGPNQGTHELKPEYKKSTEDA 112
>Os01g0161000:Os01g0161000 | Length = 740 Score = 32.3 bits (72), Expect = 0.64 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 13/109 (11%) Frame = +2 Query: 377 SLNMFKDFVPMCVFSETNQGKL------SCEGKVEHKFDMEPHKDNLLNYAKLCRERTQK 538 S N F +P C+F + N K+ G++ H + + L + Sbjct: 383 SYNFFSGSIPSCLFEDANALKVLNLKQNQLHGELAHNINESCTLEALDFNDNRIEGNLPR 442 Query: 539 SMVKTRKVQVLDNDHGMS-------MRPMPGMVGLISSSSKEKRKPTPT 664 S+V RK++VLD + MR +P + LI S+K + TPT Sbjct: 443 SLVSCRKLEVLDIQNNQINDSFPCWMRVIPRLQVLILKSNKFFGQVTPT 491
>AK120860:Os03g0684100 | Length = 620 Score = 31.2 bits (69), Expect = 1.4 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 11 PSSAASDHAPLAPPGRP 61 P++AASDHAP+AP G P Sbjct: 32 PAAAASDHAPVAPDGSP 48
>AK068344:Os02g0761700 | Length = 370 Score = 30.4 bits (67), Expect = 2.4 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = +1 Query: 757 EGSSARNRPARAIPQ----GDIERPLYVQQARAEPG-HT*AQARVQEVIGGCRRRSVKMI 921 E + R RP + P+ I+RP YV AR PG H + + I C R S K+ Sbjct: 62 EDNPRRLRPGKVSPRLSVPKHIQRPPYVN-ARQRPGLHNGPEIHDERGIE-CMRASGKLA 119 Query: 922 CVILLLLYN*VPPGFDVRNVDEAVY 996 +L V PG +D+AV+ Sbjct: 120 AQVLKFAGTLVEPGITTDEIDKAVH 144
>AK110124: | Length = 831 Score = 30.0 bits (66), Expect = 3.2 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +3 Query: 9 SRPPPRQITRRSLLPVALAPPPNEPQNRETTRGG 110 +R PP Q LP + APPP+ P +R + G Sbjct: 88 ARAPPSQRCSSPTLPSSTAPPPSTPASRHSRSSG 121
>Os02g0805400:Os02g0805400 | Length = 401 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = +2 Query: 11 PSSAASDHAPLAPPGRPSAATKRTPKSRDHPRRLAGAEMGDEAK 142 P++AA D A APPGR +A P+S R + AE+ D A+ Sbjct: 210 PAAAADDEAAAAPPGRATALLLLLPQSSALER--SSAEVFDCAR 251
>AY271618:Os01g0609300 | Length = 1457 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +2 Query: 86 KSRDHPRRLAGAEMGDEAKYLETARADRSVWLMK 187 KS+ HP LA G K L A DR + LMK Sbjct: 496 KSKSHPAALATTRYGAPGKELLKANIDREILLMK 529
>AK119824:Os06g0675700 | Length = 885 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -1 Query: 256 RVRVSIAGRGGGALPSLGDD 197 R R+ +AG GGGA P LG D Sbjct: 48 RARLELAGGGGGAAPELGPD 67
>AK100296:Os01g0704700 | Length = 424 Score = 29.3 bits (64), Expect = 5.4 Identities = 23/83 (27%), Positives = 43/83 (51%) Frame = +2 Query: 599 PMPGMVGLISSSSKEKRKPTPTKPSDVKRTRRDRRELENIIFKLFEKQPNWALKALVQET 778 P+ G VG+ S + +P + S R++ D E+++ FK + P+ A V +T Sbjct: 191 PLLGAVGVSSWIA------SPQRFSRSNRSKPDSSEVKSSNFKQEKSVPSQTQGASV-DT 243 Query: 779 DQPEQFLKEILNDLCMYNKRGPN 847 D+P L ++ + LC+Y+ + N Sbjct: 244 DKPITDLCKLESSLCVYDAKHEN 266
>AK100135:Os01g0609300 | Length = 1293 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +2 Query: 86 KSRDHPRRLAGAEMGDEAKYLETARADRSVWLMK 187 KS+ HP LA G K L A DR + LMK Sbjct: 332 KSKSHPAALATTRYGAPGKELLKANIDREILLMK 365
>AK105182:Os03g0438200 | Length = 145 Score = 28.9 bits (63), Expect = 7.1 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +3 Query: 15 PPPRQITRRSLLPVALAPPPN-EPQNRETTRG 107 PPP Q + P + PPP+ +PQ ++ T G Sbjct: 52 PPPPQFVKHFAPPAPVTPPPHPQPQQQQATGG 83
>Os07g0278800:Os07g0278800 | Length = 254 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 3 VSSRPPPRQITRRSLLPVALAPPP 74 + S PPP Q+T S P+ PPP Sbjct: 100 IDSLPPPYQVTATSTDPIHAGPPP 123
>Os02g0678300:Os02g0678300 | Length = 679 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = -3 Query: 1004 GFR*TASSTFRTSKPGGTQLYNSSRITQIIFTERRRHP 891 G R TA+ R S+P G ++ +R+ +I+F+ + P Sbjct: 205 GRRHTAADLLRYSRPDGIDVFLRARVARIVFSRKGTKP 242
>Os07g0527800:Os07g0527800 | Length = 660 Score = 28.5 bits (62), Expect = 9.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 7/55 (12%) Frame = +2 Query: 23 ASDHAPLAPPGRPSAATKRTPK-------SRDHPRRLAGAEMGDEAKYLETARAD 166 AS A +PP PS A+ TP+ P L A GDE ++++ AD Sbjct: 2 ASPAAETSPPSTPSTASCPTPRPDAAAAAPSMSPSLLRAARSGDERRFVKALLAD 56
>Os04g0543500:Os04g0543500 | Length = 260 Score = 28.5 bits (62), Expect = 9.3 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +2 Query: 2 SLFPSSAASDHAPLAPPGRPSAATKRTPKSRDHPRRLAGAEMGDEAK 142 S PS + S P +PP P A + PK R P A A+ D+ + Sbjct: 100 SASPSQSPSPPPPASPPPLPPAPSSPPPKKRRLPDGDADADAEDDGE 146
>AK110310:Os12g0608500 | Length = 687 Score = 28.5 bits (62), Expect = 9.3 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 11/67 (16%) Frame = -2 Query: 903 PAASSDDFLYSGLSSCVPW---------FGPRLLYIQRSFN--ISLRNCSGWSVSCTRAF 757 P AS D LYS + +PW G LLY+ + + R+ ++ AF Sbjct: 434 PNASLDTHLYSANAGVLPWPLRHEIVLGIGSALLYLHEEWEQCVVHRDIKPSNIMLDAAF 493 Query: 756 SAQLGCF 736 +A+LG F Sbjct: 494 NAKLGDF 500
>AK107367:Os12g0608500 | Length = 687 Score = 28.5 bits (62), Expect = 9.3 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 11/67 (16%) Frame = -2 Query: 903 PAASSDDFLYSGLSSCVPW---------FGPRLLYIQRSFN--ISLRNCSGWSVSCTRAF 757 P AS D LYS + +PW G LLY+ + + R+ ++ AF Sbjct: 434 PNASLDTHLYSANAGVLPWPLRHEIVLGIGSALLYLHEEWEQCVVHRDIKPSNIMLDAAF 493 Query: 756 SAQLGCF 736 +A+LG F Sbjct: 494 NAKLGDF 500
>AK102027:Os12g0249900 | Length = 654 Score = 28.5 bits (62), Expect = 9.3 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +2 Query: 494 NLLNYAKLCRERTQKSMVKTRKVQVLDNDHGMSMRP-MPGMVGLISSSSKEKRKPTPTKP 670 N L LC K + + ++ +L ++ RP MP ++ ++ + K+ PTP +P Sbjct: 583 NKLFDPSLCDNSQLKEIKRCIEIGLLCTQKKLTDRPTMPDVLQMLQGT---KKVPTPKQP 639 Query: 671 SDVKRTRRDRR 703 +KR R R Sbjct: 640 GYIKRVREAER 650
>AK069352:Os02g0522800 | Length = 130 Score = 28.5 bits (62), Expect = 9.3 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 14 SSAASDHAPLAPPGRPSAATKRTPKSRDHPR 106 ++AA+ +APP PS+A +RTP+ D R Sbjct: 33 AAAAAQGGAVAPPPPPSSADRRTPQPGDGGR 63 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,454,385 Number of extensions: 707824 Number of successful extensions: 3019 Number of sequences better than 10.0: 21 Number of HSP's gapped: 2993 Number of HSP's successfully gapped: 22 Length of query: 380 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 278 Effective length of database: 11,315,673 Effective search space: 3145757094 Effective search space used: 3145757094 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
