>Q7XBQ9:RGA2_SOLBU Disease resistance protein RGA2 - Solanum bulbocastanum (Wild|
           potato)
          Length = 970
 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
 Frame = +1

Query: 406 VRRPYDTYLYTDNFVFGRHSEKQMILSFLLQHCXXXXXXXVLPIIGGLAVGKKTLVAHVC 585
           VRR   + L T+  V+GR  EK  I+  L+ +        VLPI+G   +GK TL   V 
Sbjct: 138 VRRETGSVL-TEPQVYGRDKEKDEIVKILINNVSDAQHLSVLPILGMGGLGKTTLAQMVF 196

Query: 586 KDERVCSHFSSII-------------------------RLNETDFCTIADRGSIMSGTGR 690
            D+RV  HF S I                          L E D   +  +   +    R
Sbjct: 197 NDQRVTEHFHSKIWICVSEDFDEKRLIKAIVESIEGRPLLGEMDLAPLQKKLQELLNGKR 256

Query: 691 ILIVVEIFSDVDEKDWTTFYSYVATMAGGSKVIILSRLNKM-KRFGTVNPIFLNVLTYEE 867
            L+V++   + D++ W    + +   A G+ V+  +RL K+    GT+ P  L+ L+ E+
Sbjct: 257 YLLVLDDVWNEDQQKWANLRAVLKVGASGASVLTTTRLEKVGSIMGTLQPYELSNLSQED 316

Query: 868 FSYLFKALAFGSANPVEHPQLVQIADRFARE 960
              LF   AFG    + +P LV I     ++
Sbjct: 317 CWLLFMQRAFGHQEEI-NPNLVAIGKEIVKK 346

>Q7XA39:RGA4_SOLBU Putative disease resistance protein RGA4 - Solanum bulbocastanum|
           (Wild potato)
          Length = 988

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
 Frame = +1

Query: 427 YLYTDNFVFGRHSEKQMILSFLLQHCXXXXXXXVLPIIGGLAVGKKTLVAHVCKDERVCS 606
           ++ T+  V+GR  E+  I+  L+ +        V PIIG   +GK TL   +  DERV  
Sbjct: 146 FVLTEPKVYGRDKEEDEIVKILINNVNVAEELPVFPIIGMGGLGKTTLAQMIFNDERVTK 205

Query: 607 HFSSII-----------RLNETDFCTIADRGS---------------IMSGTGRILIVVE 708
           HF+  I           RL +T    I +R S               +++G   +L++ +
Sbjct: 206 HFNPKIWVCVSDDFDEKRLIKTIIGNI-ERSSPHVEDLASFQKKLQELLNGKRYLLVLDD 264

Query: 709 IFSDVDEKDWTTFYSYVATMAGGSKVIILSRLNKM-KRFGTVNPIFLNVLTYEEFSYLFK 885
           +++D D + W    + +   A G+ ++  +RL K+    GT+ P  L+ L+  +   LF 
Sbjct: 265 VWND-DLEKWAKLRAVLTVGARGASILATTRLEKVGSIMGTLQPYHLSNLSPHDSLLLFM 323

Query: 886 ALAFGSANPVEHPQLVQIADRFARE 960
             AFG      +P LV I     ++
Sbjct: 324 QRAFGQQKEA-NPNLVAIGKEIVKK 347

>Q7XA40:RGA3_SOLBU Putative disease resistance protein RGA3 - Solanum bulbocastanum|
           (Wild potato)
          Length = 992

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
 Frame = +1

Query: 397 DRMVRRPYDTYLYTDNFVFGRHSEKQMILSFLLQHCXXXXXXXVLPIIGGLAVGKKTLVA 576
           +R   R    ++ T+  V+GR  E+  I+  L+ +        VLPI+G   +GK TL  
Sbjct: 134 ERQAARRQTGFVLTEPKVYGREKEEDEIVKILINNVSYSEEVPVLPILGMGGLGKTTLAQ 193

Query: 577 HVCKDERVCSHFSSII------------------------RLNETDFCTIADRGSIMSGT 684
            V  D+R+  HF+  I                         L + D   +  +   +   
Sbjct: 194 MVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVESIEGKSLGDMDLAPLQKKLQELLNG 253

Query: 685 GRILIVVEIFSDVDEKDWTTFYSYVATMAGGSKVIILSRLNKM-KRFGTVNPIFLNVLTY 861
            R  +V++   + D++ W    + +   A G+ ++I +RL K+    GT+    L+ L+ 
Sbjct: 254 KRYFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLSNLSQ 313

Query: 862 EEFSYLFKALAFGSANPVEHPQLVQIADRFARE 960
           E+   LFK  AF        P+L++I     ++
Sbjct: 314 EDCWLLFKQRAFCHQTETS-PKLMEIGKEIVKK 345

>Q7XA42:RGA1_SOLBU Putative disease resistance protein RGA1 - Solanum bulbocastanum|
            (Wild potato)
          Length = 979

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 25/226 (11%)
 Frame = +1

Query: 436  TDNFVFGRHSEKQMILSFLLQHCXXXXXXXVLPIIGGLAVGKKTLVAHVCKDERVCSHFS 615
            T+  V+GR  EK  I+  L+          VLPI+G   +GK TL   V  D+RV   F 
Sbjct: 147  TEPQVYGRDKEKDEIVKILINTASDAQKLSVLPILGMGGLGKTTLSQMVFNDQRVTERFY 206

Query: 616  SII------------------------RLNETDFCTIADRGSIMSGTGRILIVVEIFSDV 723
              I                         L++ D   +  +   +    R  +V++   + 
Sbjct: 207  PKIWICISDDFNEKRLIKAIVESIEGKSLSDMDLAPLQKKLQELLNGKRYFLVLDDVWNE 266

Query: 724  DEKDWTTFYSYVATMAGGSKVIILSRLNKM-KRFGTVNPIFLNVLTYEEFSYLFKALAFG 900
            D+  W    + +   A G+ V+  +RL K+    GT+ P  L+ L+ E+  +LF   AFG
Sbjct: 267  DQHKWANLRAVLKVGASGAFVLTTTRLEKVGSIMGTLQPYELSNLSPEDCWFLFMQRAFG 326

Query: 901  SANPVEHPQLVQIADRFARELQSRWSILAANLFADVMRTNPNVHFW 1038
                + +P L+ I     ++       LAA     ++R       W
Sbjct: 327  HQEEI-NPNLMAIGKEIVKKCGG--VPLAAKTLGGILRFKREEREW 369

>Q9LRR4:R13L1_ARATH Putative disease resistance RPP13-like protein 1 - Arabidopsis|
            thaliana (Mouse-ear cress)
          Length = 1054

 Score = 48.1 bits (113), Expect = 9e-05
 Identities = 74/355 (20%), Positives = 141/355 (39%), Gaps = 30/355 (8%)
 Frame = +1

Query: 79   VVEEADGRYITNSGMLAQLKMLADAMYRGYWAMGAFKYRSLKQTPMADXXXXXXXXXXX- 255
            V+ +A+ + ITN  +   +  L D +Y    A+      +L+    A+            
Sbjct: 52   VLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDDIATEALRLNIGAESSSSNRLRQLRG 111

Query: 256  RLKRSRIIHGSARKHKERHLMEFHAALESL--EIAVANITEFVVILSGCDRMVRRPYDTY 429
            R+     + G++ +H E  L +    LE L  +  +  + E   ++       +R   T 
Sbjct: 112  RMSLGDFLDGNS-EHLETRLEKVTIRLERLASQRNILGLKELTAMIPK-----QRLPTTS 165

Query: 430  LYTDNFVFGRHSEKQMILSFLLQHCXXXXXXXVLPIIGGLAVGKKTLVAHVCKDERVCSH 609
            L  ++ VFGR  +K  I+ FL+          V+ I+G   VGK TL   +  D+ V S+
Sbjct: 166  LVDESEVFGRDDDKDEIMRFLIPENGKDNGITVVAIVGIGGVGKTTLSQLLYNDQHVRSY 225

Query: 610  FSS-----------IIRLNETDFCTIADR--------------GSIMSGTG-RILIVVEI 711
            F +           + ++ +  + ++  R                 ++GTG   L+V++ 
Sbjct: 226  FGTKVWAHVSEEFDVFKITKKVYESVTSRPCEFTDLDVLQVKLKERLTGTGLPFLLVLDD 285

Query: 712  FSDVDEKDWTTFYSYVATMAGGSKVIILSRLNKMKR-FGTVNPIFLNVLTYEEFSYLFKA 888
              + +  DW          A GS++++ +R  ++      V+   L  L+  +   LF  
Sbjct: 286  LWNENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCAVHVHNLQPLSDGDCWSLFMK 345

Query: 889  LAFGSANPVEHPQLVQIADRFARELQSRWSILAANLFADVMRTNPNVHFWLSILS 1053
              FG+  P  + ++  +A+R     + R   LA      V+R    V  W  +LS
Sbjct: 346  TVFGNQEPCLNREIGDLAERIVH--KCRGLPLAVKTLGGVLRFEGKVIEWERVLS 398

>Q9LRR5:DRL21_ARATH Putative disease resistance protein At3g14460 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 1424

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 51/225 (22%), Positives = 87/225 (38%), Gaps = 27/225 (12%)
 Frame = +1

Query: 454  GRHSEKQMILSFLLQHCXXXXXXX-VLPIIGGLAVGKKTLVAHVCKDERVCSHFS----- 615
            GR  +K  +++ LL           V+ ++G   VGK TL   V  D RV  HF      
Sbjct: 170  GRVEDKLALVNLLLSDDEISIGKPAVISVVGMPGVGKTTLTEIVFNDYRVTEHFEVKMWI 229

Query: 616  -------------------SIIRLNETDFCTIADRGSIMSGTGRILIVVEIFSDVDEKDW 738
                               +   +N  D  ++  +        R L+V++ F    + +W
Sbjct: 230  SAGINFNVFTVTKAVLQDITSSAVNTEDLPSLQIQLKKTLSGKRFLLVLDDFWSESDSEW 289

Query: 739  TTFYSYVATMAGGSKVIILSRLNKMKRFGTVNPIF-LNVLTYEEFSYLFKALAFGSANPV 915
             +F         GSK+++ +R   +        I+ + ++T EE   L    AFG+ +  
Sbjct: 290  ESFQVAFTDAEEGSKIVLTTRSEIVSTVAKAEKIYQMKLMTNEECWELISRFAFGNISVG 349

Query: 916  E-HPQLVQIADRFARELQSRWSILAANLFADVMRTNPNVHFWLSI 1047
              + +L  I  R A   Q +   LAA   A  +R+ PN   W ++
Sbjct: 350  SINQELEGIGKRIAE--QCKGLPLAARAIASHLRSKPNPDDWYAV 392


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 261,068,295
Number of extensions: 5588434
Number of successful extensions: 13746
Number of sequences better than 10.0: 6
Number of HSP's gapped: 13741
Number of HSP's successfully gapped: 6
Length of query: 500
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 383
Effective length of database: 68,593,924
Effective search space: 26271472892
Effective search space used: 26271472892
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)