ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf25b18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067297:Os01g0501700 | 500 | e-142 | 2 | AK109338:Os03g0852400 | 35 | 0.16 | 3 | AK060985:Os03g0852400 | 35 | 0.16 | 4 | AK072052:Os02g0276500 | 33 | 0.47 | 5 | AK071428:Os01g0561500 | 33 | 0.61 | 6 | AK110027: | 32 | 1.0 | 7 | Os04g0688400:Os04g0688400 | 32 | 1.4 | 8 | AK119632:Os06g0728700 | 30 | 4.0 | 9 | AK111637:Os06g0728700 | 30 | 4.0 | 10 | AK062983:Os04g0258900 | 29 | 6.7 | 11 | AK110487: | 29 | 6.8 | 12 | Os12g0270500:Os12g0270500 | 29 | 8.8 | 13 | Os05g0551900:Os05g0551900 | 29 | 8.8 | 14 | Os04g0528600:Os04g0528600 | 29 | 8.8 | 15 | Os01g0946800:Os01g0946800 | 29 | 8.8 | 16 | AK120993: | 29 | 8.8 |
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>AK067297:Os01g0501700 | Length = 359 Score = 500 bits (1288), Expect = e-142 Identities = 264/354 (74%), Positives = 288/354 (81%), Gaps = 12/354 (3%) Frame = +1 Query: 127 MGSAGALLSRPPPQLGSILLRRHHIS-------LPHLSSCTPEPLHCRR-RHLRCSAVEG 282 MGSAGALLS PP LG R HH +P L S PEPL CR RHLRC+AV+G Sbjct: 1 MGSAGALLSHSPPGLGGFPPRHHHHHRLSVLRCVPLLPSPAPEPLSCRHGRHLRCAAVDG 60 Query: 283 SSGQDTNLP---ASQREESPSSSLGATLQDPLAGRVENGSFEDVTQ-EDQSSLYNFLYPS 450 +G++T P A QREESPS SLGA L+DP V+NGSF +T+ E+QSSLYNFLYPS Sbjct: 61 GAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGITEDEEQSSLYNFLYPS 120 Query: 451 KELLPDDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFL 630 KELLPDDKEMSIFDHLEELR RIF+SVLAVGA+I+GCFA+SKD+I+ILEAPVSVQGVRFL Sbjct: 121 KELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILEAPVSVQGVRFL 180 Query: 631 QLSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYL 810 QLSPGEFFFTTLKVSGYCGLL+GSPVILYEIIAFVLPGLT+DERKFLGPIVLGSSVLFYL Sbjct: 181 QLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGPIVLGSSVLFYL 240 Query: 811 GILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQ 990 GI FSYT+LAPAALNFFVNYA+GAVES+WSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQ Sbjct: 241 GIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQ 300 Query: 991 VGIVSSEQMLSIWRYXXXXXXXXXXXLTPSTDPLTQMXXXXXXXXXXXXXAWMV 1152 VG+VSS+QMLSIWRY LTPSTDPLTQM AWMV Sbjct: 301 VGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMV 354
>AK109338:Os03g0852400 | Length = 219 Score = 34.7 bits (78), Expect = 0.16 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%) Frame = +1 Query: 97 LSPIELPRETMGSAGALLSRPPPQLGSILLRRHHISLPHLSSCTPEPL-HCRRRHLRCSA 273 L+P + P E SA AL PP+ + H +PH ++ P P+ H SA Sbjct: 55 LAPSQPPSEASSSAAALSPPAPPETSPLPAPSHSPPVPHSAAPEPSPMEHSAASAPAPSA 114 Query: 274 VEGSSG----QDTNLPASQREESPSS 339 + G +D + +EE PS+ Sbjct: 115 AKAKQGGDDEEDDDDKEKDKEEKPST 140
>AK060985:Os03g0852400 | Length = 219 Score = 34.7 bits (78), Expect = 0.16 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%) Frame = +1 Query: 97 LSPIELPRETMGSAGALLSRPPPQLGSILLRRHHISLPHLSSCTPEPL-HCRRRHLRCSA 273 L+P + P E SA AL PP+ + H +PH ++ P P+ H SA Sbjct: 55 LAPSQPPSEASSSAAALSPPAPPETSPLPAPSHSPPVPHSAAPEPSPMEHSAASAPAPSA 114 Query: 274 VEGSSG----QDTNLPASQREESPSS 339 + G +D + +EE PS+ Sbjct: 115 AKAKQGGDDEEDDDDKEKDKEEKPST 140
>AK072052:Os02g0276500 | Length = 470 Score = 33.1 bits (74), Expect = 0.47 Identities = 23/70 (32%), Positives = 28/70 (40%) Frame = +2 Query: 89 LSVYHLSSSRERPWEAQERCSPARHRNXXXXXXXXXXXPFPICPHARPSPSTAAAGTFAV 268 L+ ++ S RP RC+P RHR P + PSPSTA A Sbjct: 3 LAAAAVAVSFPRPAPPPRRCAPRRHRRALA----------PRAASSSPSPSTAVAAPVYA 52 Query: 269 PPLRGAAART 298 P R A RT Sbjct: 53 PTPRDRALRT 62
>AK071428:Os01g0561500 | Length = 212 Score = 32.7 bits (73), Expect = 0.61 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Frame = +1 Query: 100 SPIELPRETMGSA--GALLSRPPPQLGSILLRRHHISLPHLSSCTPEPLHCRRRHLRCSA 273 SP PR SA AL + PPP++GSI+ H+ P + +P LH H S Sbjct: 26 SPPHQPRPPASSAIAAALSNAPPPRIGSII----HLRPPPCVASSPPHLHTSPPHRLLS- 80 Query: 274 VEGSSGQDTNLPASQREESPSSSLGAT 354 + +P + R PS++ AT Sbjct: 81 --------SPVPRAPRPAPPSTADAAT 99
>AK110027: | Length = 940 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/94 (24%), Positives = 42/94 (44%) Frame = +1 Query: 124 TMGSAGALLSRPPPQLGSILLRRHHISLPHLSSCTPEPLHCRRRHLRCSAVEGSSGQDTN 303 ++GS+ L RP + S L + ++ P P H +R + S + T+ Sbjct: 316 SIGSSNRTLPRPHRRSSSNSLLGKTPTDEKENASIPAPSHSKRHSISTSIEAAPARARTS 375 Query: 304 LPASQREESPSSSLGATLQDPLAGRVENGSFEDV 405 LP S + +PS S A+L + ++ GS + + Sbjct: 376 LPLSPADNTPSPSKSASLSALRSRGLQPGSLQSL 409
>Os04g0688400:Os04g0688400 | Length = 318 Score = 31.6 bits (70), Expect = 1.4 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Frame = +2 Query: 149 SPARHRNXXXXXXXXXXXPFP-----ICPHARPSPSTAAAGTFAVPPLRGAAARTRICQR 313 +P R R P P I P + PSP ++ T A PP R A + R Sbjct: 178 APRRRRVSLSPLSPPLALPLPYISLTISPSSPPSPPLSSTHTTAPPPPRRRATAPPLSHR 237 Query: 314 LKEKSLHRAASAPPS 358 HRAA+ PPS Sbjct: 238 -----RHRAAAPPPS 247
>AK119632:Os06g0728700 | Length = 451 Score = 30.0 bits (66), Expect = 4.0 Identities = 23/79 (29%), Positives = 35/79 (44%) Frame = +1 Query: 283 SSGQDTNLPASQREESPSSSLGATLQDPLAGRVENGSFEDVTQEDQSSLYNFLYPSKELL 462 +SG+D N+P PS S QD V N S ED ++E+ L+ ++ Sbjct: 213 TSGEDNNVPCEPTVIDPSQSHKEIDQD--RKDVNNMSEEDSSEEEVQETSLKLFGRTVVI 270 Query: 463 PDDKEMSIFDHLEELRARI 519 PD ++ S D E +I Sbjct: 271 PDPRKRSSSDPKHESEEQI 289
>AK111637:Os06g0728700 | Length = 451 Score = 30.0 bits (66), Expect = 4.0 Identities = 23/79 (29%), Positives = 35/79 (44%) Frame = +1 Query: 283 SSGQDTNLPASQREESPSSSLGATLQDPLAGRVENGSFEDVTQEDQSSLYNFLYPSKELL 462 +SG+D N+P PS S QD V N S ED ++E+ L+ ++ Sbjct: 213 TSGEDNNVPCEPTVIDPSQSHKEIDQD--RKDVNNMSEEDSSEEEVQETSLKLFGRTVVI 270 Query: 463 PDDKEMSIFDHLEELRARI 519 PD ++ S D E +I Sbjct: 271 PDPRKRSSSDPKHESEEQI 289
>AK062983:Os04g0258900 | Length = 408 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -3 Query: 167 CGG--GRESSAPALPMVSRGSSIGDKPIIFCLLQPVPCRCCFQTFFFSS 27 CGG G +S + + + S GS G + +F ++ CR FFFSS Sbjct: 159 CGGDGGLQSRSSEIFLASCGSDAGGEEPLFAVIWMACCRGKLVAFFFSS 207
>AK110487: | Length = 523 Score = 29.3 bits (64), Expect = 6.8 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 11/107 (10%) Frame = +1 Query: 109 ELPRETMGSAGALLSRPPPQLGSILLRRHH-------ISLPHLSSCTPEPLHCRRRHLRC 267 E+ + A ++ SRPP +L + L ++HH S ++ P + L Sbjct: 292 EVAAACVAPASSVASRPPSRLDAALEQQHHATHTVRAASAAAAAAAAAGPGSSPLKPLHP 351 Query: 268 SAVEGSSGQDTNLPASQREESPSSSLGATLQDPL----AGRVENGSF 396 SA GS D S + PS+ + +P+ AG SF Sbjct: 352 SASRGSLAADNGSEPSTPQSGPSTPEPSVAAEPVGASAAGFASRSSF 398
>Os12g0270500:Os12g0270500 | Length = 536 Score = 28.9 bits (63), Expect = 8.8 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 10/122 (8%) Frame = +1 Query: 76 SKQKIIGLSPIELP--------RETMGSAGALLSRPPPQLGSILLRRHHISL-PHL-SSC 225 S+ I +P LP R +AGA S PPP+ G ++ H S P L Sbjct: 418 SRHGAIASTPARLPPQQGRRGHRGIEATAGAATSSPPPRRGRCRIQPHRDSRGPRLIEGA 477 Query: 226 TPEPLHCRRRHLRCSAVEGSSGQDTNLPASQREESPSSSLGATLQDPLAGRVENGSFEDV 405 P + RRR L A G + + A R +S S++ A ++ +FED Sbjct: 478 VPAAVPSRRRPLSHRA--GRASRRIQAAACSRIQSHSAASAAPY------TADSTNFEDQ 529 Query: 406 TQ 411 Q Sbjct: 530 PQ 531
>Os05g0551900:Os05g0551900 | Length = 798 Score = 28.9 bits (63), Expect = 8.8 Identities = 22/82 (26%), Positives = 34/82 (41%) Frame = +1 Query: 172 GSILLRRHHISLPHLSSCTPEPLHCRRRHLRCSAVEGSSGQDTNLPASQREESPSSSLGA 351 G I+ R + + + S PL SAV+G+ G AS E S Sbjct: 254 GLIIWRSGSVMVVYRGSNYKRPLKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDV 313 Query: 352 TLQDPLAGRVENGSFEDVTQED 417 Q +A R+ + ED+T+E+ Sbjct: 314 NTQREIAARLNMQNTEDMTEEE 335
>Os04g0528600:Os04g0528600 | Length = 1645 Score = 28.9 bits (63), Expect = 8.8 Identities = 10/26 (38%), Positives = 20/26 (76%) Frame = +1 Query: 436 FLYPSKELLPDDKEMSIFDHLEELRA 513 FL P+ L+P K +++F++++ELR+ Sbjct: 894 FLCPNSSLVPSTKYLTVFENVDELRS 919
>Os01g0946800:Os01g0946800 | Length = 2240 Score = 28.9 bits (63), Expect = 8.8 Identities = 10/26 (38%), Positives = 20/26 (76%) Frame = +1 Query: 436 FLYPSKELLPDDKEMSIFDHLEELRA 513 FL P+ L+P K +++F++++ELR+ Sbjct: 1597 FLCPNSSLVPSTKYLTVFENVDELRS 1622
>AK120993: | Length = 340 Score = 28.9 bits (63), Expect = 8.8 Identities = 20/58 (34%), Positives = 23/58 (39%) Frame = +1 Query: 208 PHLSSCTPEPLHCRRRHLRCSAVEGSSGQDTNLPASQREESPSSSLGATLQDPLAGRV 381 P SS P PL R RCS SS T PA S + LGA + R+ Sbjct: 122 PPTSSALP-PLSSTARRPRCSTRGASSAPQTGAPARPPSPSAAPPLGARRAPSTSARI 178 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 40,566,187 Number of extensions: 988952 Number of successful extensions: 3500 Number of sequences better than 10.0: 16 Number of HSP's gapped: 3485 Number of HSP's successfully gapped: 16 Length of query: 452 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 348 Effective length of database: 11,235,591 Effective search space: 3909985668 Effective search space used: 3909985668 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
