ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf25b18 |
|---|---|
| Clone Library Name | barley_pub |
>P54086:Y194_SYNY3 Uncharacterized protein sll0194 - Synechocystis sp. (strain PCC 6803)| Length = 254 Score = 262 bits (669), Expect = 3e-69 Identities = 128/213 (60%), Positives = 164/213 (76%) Frame = +1 Query: 460 LPDDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLS 639 +PDD EMS+FDHL+ELR RIF+S+ AV ++ CF F K +++ L+ P V+FLQLS Sbjct: 21 VPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQLS 78 Query: 640 PGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGIL 819 PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLT+ ER+ LGP+VLGSSVLF+ G+ Sbjct: 79 PGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAGLG 138 Query: 820 FSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGI 999 F+Y L PAAL FFV+Y VE +WSID+YFEFVL+L+FSTGL+FQ+P+IQ++LG +GI Sbjct: 139 FAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFLGI 198 Query: 1000 VSSEQMLSIWRYXXXXXXXXXXXLTPSTDPLTQ 1098 VSSEQML WR+ LTPSTDPLTQ Sbjct: 199 VSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQ 231
>O78493:YCF43_GUITH Uncharacterized tatC-like protein ycf43 - Guillardia theta| (Cryptomonas phi) Length = 290 Score = 234 bits (598), Expect = 5e-61 Identities = 113/211 (53%), Positives = 150/211 (71%) Frame = +1 Query: 469 DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGE 648 + EMS+ +HLEE+R R F S + II C F K+I+K L+ P + G++FLQ +PGE Sbjct: 54 EAEMSLAEHLEEIRQRAFWSFSVLTTMIISCIIFVKNIVKTLQEPAA--GIKFLQFAPGE 111 Query: 649 FFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSY 828 +FF ++KV+ Y G+LI SP I+Y+I+ FVLPG+TKDERK L PI++GS +LF LG++F Y Sbjct: 112 YFFASIKVAAYSGILISSPFIVYQILLFVLPGMTKDERKTLLPIIIGSMILFLLGLIFGY 171 Query: 829 TILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSS 1008 IL PA+LNFF+ Y VE WS +QYFEF+LVLLF T L+FQ+PV+QL+LG + IVS Sbjct: 172 YILVPASLNFFIKYGSDVVEPFWSFEQYFEFILVLLFGTALAFQLPVLQLVLGFLRIVSG 231 Query: 1009 EQMLSIWRYXXXXXXXXXXXLTPSTDPLTQM 1101 + M SIWRY LTPS DPLTQ+ Sbjct: 232 KTMFSIWRYVILLSTVVGAVLTPSVDPLTQI 262
>Q6B8S9:YCF43_GRATL Uncharacterized tatC-like protein ycf43 - Gracilaria tenuistipitata| var. liui (Red alga) Length = 238 Score = 219 bits (559), Expect = 2e-56 Identities = 107/209 (51%), Positives = 146/209 (69%) Frame = +1 Query: 475 EMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFF 654 EMSIF+HLEELR RIFI+ L CF + K+I IL+ P G++FLQL+PGE+ Sbjct: 10 EMSIFEHLEELRQRIFIAALIFIVITAICFTYMKNISYILQQPAI--GIKFLQLAPGEYL 67 Query: 655 FTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTI 834 FT++KV+ Y G L+ SP I+Y+I F+LPGLTK E F+ PI+ S +LF+ GI+F+Y I Sbjct: 68 FTSIKVALYSGFLLSSPFIIYQITLFILPGLTKKESNFIVPILFISIILFFSGIVFAYII 127 Query: 835 LAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSEQ 1014 L PAAL F +NY VE IWS +QYF F+L+LLFSTG++FQ+P+IQ++LG + I SS + Sbjct: 128 LVPAALKFLINYGNEIVEPIWSFEQYFNFILLLLFSTGIAFQIPIIQVILGILKIFSSSE 187 Query: 1015 MLSIWRYXXXXXXXXXXXLTPSTDPLTQM 1101 M + W+Y +TPSTDP+TQ+ Sbjct: 188 MYAYWKYIVLGATVIAAIITPSTDPITQI 216
>P51264:YCF43_PORPU Uncharacterized tatC-like protein ycf43 - Porphyra purpurea| Length = 254 Score = 217 bits (552), Expect = 1e-55 Identities = 112/232 (48%), Positives = 164/232 (70%), Gaps = 2/232 (0%) Frame = +1 Query: 412 EDQSSLYNFLYPSKELLPD-DKEMSIFDHLEELRAR-IFISVLAVGASIIGCFAFSKDII 585 E Q++L + + E LP+ D MSI +HLEELR R +F+ + + A+ I F K I+ Sbjct: 4 EPQNNLLANINTNSENLPENDVPMSITEHLEELRQRTVFVFIFFLLAATIS-FTQIKIIV 62 Query: 586 KILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERK 765 +I +AP G++FLQL+PGE+FF+++K++ YCG++ +P +Y++I ++LPGLT ERK Sbjct: 63 EIFQAPAI--GIKFLQLAPGEYFFSSIKIAIYCGIVATTPFGVYQVILYILPGLTNKERK 120 Query: 766 FLGPIVLGSSVLFYLGILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFST 945 + PI++GS VLF +G +F+Y +LAPAALNF ++Y VE +WS +QYF+F+L+LLFST Sbjct: 121 VILPILIGSIVLFIVGGIFAYFVLAPAALNFLISYGADIVEPLWSFEQYFDFILLLLFST 180 Query: 946 GLSFQVPVIQLLLGQVGIVSSEQMLSIWRYXXXXXXXXXXXLTPSTDPLTQM 1101 GL+F++P+IQLLLG G VS+ QML WRY LTPSTDP+TQ+ Sbjct: 181 GLAFEIPIIQLLLGISGTVSASQMLLAWRYIIIISTIIGAVLTPSTDPVTQI 232
>Q9TLS5:YCF43_CYACA Uncharacterized tatC-like protein ycf43 - Cyanidium caldarium| Length = 239 Score = 214 bits (545), Expect = 7e-55 Identities = 97/212 (45%), Positives = 149/212 (70%) Frame = +1 Query: 466 DDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPG 645 D +MSI++HLEELR R S++A+ S++ C +I++++ P G++FLQLSPG Sbjct: 8 DSFQMSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQPAI--GIKFLQLSPG 65 Query: 646 EFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFS 825 E+FFT++K++ Y G+++ SP+I YEII F++PGLTK ER+ L PI++ S LF G++F Sbjct: 66 EYFFTSIKITLYLGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVAGLIFG 125 Query: 826 YTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVS 1005 Y + P A+ FF+NY + +E IWS +YF+F+++ LFST +SFQ+P+ Q+LLG + I++ Sbjct: 126 YIYITPIAVRFFINYGKDMIEPIWSFKEYFDFIILSLFSTAISFQIPIFQILLGSLKIIN 185 Query: 1006 SEQMLSIWRYXXXXXXXXXXXLTPSTDPLTQM 1101 S+ MLS+WRY +TPSTDPL Q+ Sbjct: 186 SKMMLSVWRYVVVGSTIFSAIITPSTDPLIQL 217
>P49538:YCF43_ODOSI Uncharacterized tatC-like protein ycf43 - Odontella sinensis (Marine| centric diatom) Length = 263 Score = 209 bits (531), Expect = 3e-53 Identities = 104/209 (49%), Positives = 144/209 (68%) Frame = +1 Query: 475 EMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFF 654 E+ +H+EEL+ R+F + + K ++KILE PV+ V+F QLSPGE+F Sbjct: 35 ELPFSEHIEELKQRLFHTFWIILILTFISLCEVKLLVKILELPVN--NVKFFQLSPGEYF 92 Query: 655 FTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTI 834 +T+K+S Y G L GSP + +II F+LPGLTK E K + P++L S LF G++FSY Sbjct: 93 VSTVKISFYTGFLFGSPFAIGQIILFLLPGLTKKETKIILPLLLSSLGLFGFGLVFSYYA 152 Query: 835 LAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSEQ 1014 L PAALNFF+NY++ +E +WS DQYFEF+LVL +STGL+FQ+P+IQ+LLG + I+S++Q Sbjct: 153 LIPAALNFFLNYSDEVIEPLWSFDQYFEFILVLFYSTGLAFQIPIIQILLGLLNIISAKQ 212 Query: 1015 MLSIWRYXXXXXXXXXXXLTPSTDPLTQM 1101 ML+ WRY LTPSTDPLTQ+ Sbjct: 213 MLAAWRYIILVSTIIGAILTPSTDPLTQL 241
>Q1XDM3:YCF43_PORYE Uncharacterized tatC-like protein ycf43 - Porphyra yezoensis| Length = 254 Score = 204 bits (518), Expect = 9e-52 Identities = 102/213 (47%), Positives = 149/213 (69%), Gaps = 1/213 (0%) Frame = +1 Query: 466 DDKEMSIFDHLEELRAR-IFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSP 642 +D MSI +HLEELR R +F+ + + A+ I F K I+ IL+AP G++FLQL+P Sbjct: 23 NDIPMSITEHLEELRQRTLFVFLFFLFATTIS-FTQIKIIVAILQAPAV--GIKFLQLAP 79 Query: 643 GEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILF 822 GE+FF+++KV+ YCG++ +P +Y++I ++LPGLT ERK + P+++ S +LF G +F Sbjct: 80 GEYFFSSIKVAIYCGIVATTPFAVYQVILYILPGLTGKERKIILPLLISSVLLFITGGIF 139 Query: 823 SYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIV 1002 +Y +LAPAAL F ++Y VE +WS +QYF+F+L+LL STGL+F++P+IQLLLG G Sbjct: 140 AYFVLAPAALTFLISYGSDIVEPLWSFEQYFDFILLLLLSTGLAFEIPIIQLLLGVSGTF 199 Query: 1003 SSEQMLSIWRYXXXXXXXXXXXLTPSTDPLTQM 1101 SS QM+ WRY LTPSTDP+TQ+ Sbjct: 200 SSSQMIRAWRYIIIIATIAGAILTPSTDPVTQL 232
>O67305:Y1267_AQUAE Uncharacterized protein aq_1267 - Aquifex aeolicus| Length = 240 Score = 125 bits (315), Expect = 3e-28 Identities = 71/192 (36%), Positives = 115/192 (59%), Gaps = 6/192 (3%) Frame = +1 Query: 478 MSIFDHLEELRARIFISVLA--VGASIIGCFAFSKDIIKILEAPV--SVQGVRFLQLSPG 645 M + +HL ELR R+ IS++A +G+ I F F+K + +IL+ P+ S V + LSP Sbjct: 1 MPLTEHLRELRYRLIISIIAFLIGSGI--AFYFAKYVFEILKEPILKSYPEVELITLSPT 58 Query: 646 EFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFS 825 E F +K+S G +I SPVILY+ F+ P L E++ P++LGS +LF LG LF+ Sbjct: 59 EPLFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFA 118 Query: 826 YTILAPAALNFF--VNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGI 999 Y I+ P AL F + + + S+D Y FVL L+ + G++F++P++ +L + G+ Sbjct: 119 YFIVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQKAGV 178 Query: 1000 VSSEQMLSIWRY 1035 ++ EQ+ S +Y Sbjct: 179 ITPEQLASFRKY 190
>P69423:TATC_ECOLI Sec-independent protein translocase protein tatC - Escherichia coli| Length = 258 Score = 118 bits (295), Expect = 6e-26 Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Frame = +1 Query: 484 IFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQ---GVRFLQLSPGEFF 654 + HL ELR R+ ++AV + F+ DI ++ AP+ Q G + F Sbjct: 9 LITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPF 68 Query: 655 FTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTI 834 FT +K++ L++ +PVILY++ AF+ P L K ER+ + P+++ SS+LFY+G+ F+Y + Sbjct: 69 FTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFV 128 Query: 835 LAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSEQ 1014 + P A F N A V+ I Y FV+ L + G+SF+VPV +LL +GI S E Sbjct: 129 VFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPED 188 Query: 1015 MLSIWRYXXXXXXXXXXXLTP 1077 + Y LTP Sbjct: 189 LRKKRPYVLVGAFVVGMLLTP 209
>P69424:TATC_ECO57 Sec-independent protein translocase protein tatC - Escherichia coli| O157:H7 Length = 258 Score = 118 bits (295), Expect = 6e-26 Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Frame = +1 Query: 484 IFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQ---GVRFLQLSPGEFF 654 + HL ELR R+ ++AV + F+ DI ++ AP+ Q G + F Sbjct: 9 LITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPF 68 Query: 655 FTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTI 834 FT +K++ L++ +PVILY++ AF+ P L K ER+ + P+++ SS+LFY+G+ F+Y + Sbjct: 69 FTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFV 128 Query: 835 LAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSEQ 1014 + P A F N A V+ I Y FV+ L + G+SF+VPV +LL +GI S E Sbjct: 129 VFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPED 188 Query: 1015 MLSIWRYXXXXXXXXXXXLTP 1077 + Y LTP Sbjct: 189 LRKKRPYVLVGAFVVGMLLTP 209
>Q8FBI6:TATC_ECOL6 Sec-independent protein translocase protein tatC - Escherichia coli| O6 Length = 258 Score = 117 bits (292), Expect = 1e-25 Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 3/201 (1%) Frame = +1 Query: 484 IFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQ---GVRFLQLSPGEFF 654 + HL ELR R+ +++V + F+ DI ++ AP+ Q G + F Sbjct: 9 LITHLIELRKRLLNCIISVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPF 68 Query: 655 FTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTI 834 FT +K++ L++ +PVILY++ AF+ P L K ER+ + P+++ SS+LFY+G+ F+Y + Sbjct: 69 FTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFV 128 Query: 835 LAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSEQ 1014 + P A F N A V+ I Y FV+ L + G+SF+VPV +LL +GI S E Sbjct: 129 VFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPED 188 Query: 1015 MLSIWRYXXXXXXXXXXXLTP 1077 + Y LTP Sbjct: 189 LRKKRPYVLVGAFVVGMLLTP 209
>P54085:TATC_AZOCH Sec-independent protein translocase protein tatC homolog -| Azotobacter chroococcum mcd 1 Length = 255 Score = 114 bits (286), Expect = 7e-25 Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 4/209 (1%) Frame = +1 Query: 463 PD-DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSV---QGVRFL 630 PD D++M + HL ELR+R+ SV AV F F++DI ++ AP+ +G + Sbjct: 5 PDSDQDMPLVAHLTELRSRLLRSVAAVLLIFAALFYFAQDIYALVSAPLRAYLPEGATMI 64 Query: 631 QLSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYL 810 F K++ L + PV+L+++ F+ PGL + E++ P++ S +LFY Sbjct: 65 ATGVASPFLAPFKLTLMISLFLAMPVVLHQVWGFIAPGLYQHEKRIAMPLMASSVLLFYA 124 Query: 811 GILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQ 990 G+ F+Y ++ P FF + V + I QY +FVL L F+ G++F+VPV LL Sbjct: 125 GMAFAYFVVFPIMFGFFASVTPEGVAMMTDIGQYLDFVLTLFFAFGVAFEVPVATFLLIW 184 Query: 991 VGIVSSEQMLSIWRYXXXXXXXXXXXLTP 1077 VGIV + + Y LTP Sbjct: 185 VGIVDVASLRNSRPYVIVGCFVVGMVLTP 213
>P44560:TATC_HAEIN Sec-independent protein translocase protein tatC - Haemophilus| influenzae Length = 256 Score = 107 bits (268), Expect = 9e-23 Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 3/206 (1%) Frame = +1 Query: 469 DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSV---QGVRFLQLS 639 D+ + HL ELR R+ V+ V + FS DI + AP++ +G + + Sbjct: 5 DESQPLITHLVELRNRLLRCVICVVLVFVALVYFSNDIYHFVAAPLTAVMPKGATMIATN 64 Query: 640 PGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGIL 819 FFT +K++ + I P +LY+I AF+ P L + E++ + P++ S++LFY G+ Sbjct: 65 IQTPFFTPIKLTAIVAIFISVPYLLYQIWAFIAPALYQHEKRMIYPLLFSSTILFYCGVA 124 Query: 820 FSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGI 999 F+Y I+ P +FF A V I Y +F L L + G+ F+VP+ +LL GI Sbjct: 125 FAYYIVFPLVFSFFTQTAPEGVTIATDISSYLDFALALFLAFGVCFEVPIAIILLCWTGI 184 Query: 1000 VSSEQMLSIWRYXXXXXXXXXXXLTP 1077 + + + Y LTP Sbjct: 185 TTVKALSEKRPYIIVAAFFIGMLLTP 210
>Q9ZM59:TATC_HELPJ Sec-independent protein translocase protein tatC homolog -| Helicobacter pylori J99 (Campylobacter pylori J99) Length = 249 Score = 107 bits (266), Expect = 1e-22 Identities = 56/195 (28%), Positives = 103/195 (52%) Frame = +1 Query: 493 HLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFFFTTLKV 672 HL+ELR R+ +SV + + +GCF F K+I + ++ S +G +QLSP E +K+ Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKNIFEFVKN--SYKGT-LIQLSPIEGVMVAVKI 64 Query: 673 SGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTILAPAAL 852 S ++I P+I +++ F+ PGL K+E+K + P V S +F +G FSY ++ P + Sbjct: 65 SFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLMGAAFSYYVVFPFII 124 Query: 853 NFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSEQMLSIWR 1032 + + + S Y F L+ G++F++PV+ L +VG+++ + + ++ Sbjct: 125 EYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLKAYFK 184 Query: 1033 YXXXXXXXXXXXLTP 1077 Y +TP Sbjct: 185 YAIVVIFIVAAIITP 199
>O25701:TATC_HELPY Sec-independent protein translocase protein tatC homolog -| Helicobacter pylori (Campylobacter pylori) Length = 253 Score = 106 bits (265), Expect = 2e-22 Identities = 56/195 (28%), Positives = 102/195 (52%) Frame = +1 Query: 493 HLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFFFTTLKV 672 HL+ELR R+ +SV + + +GCF F K I + ++ S +G +QLSP E +K+ Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKN--SYKGT-LIQLSPIEGVMVAVKI 64 Query: 673 SGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTILAPAAL 852 S ++I P+I +++ F+ PGL K+E+K + P V S +F +G FSY ++ P + Sbjct: 65 SFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVFPFII 124 Query: 853 NFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSEQMLSIWR 1032 + + + S Y F L+ G++F++PV+ L +VG+++ + + ++ Sbjct: 125 EYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLKAYFK 184 Query: 1033 YXXXXXXXXXXXLTP 1077 Y +TP Sbjct: 185 YAIVVIFIVAAIITP 199
>P42252:TATCD_BACSU Sec-independent protein translocase protein tatCd - Bacillus subtilis| Length = 245 Score = 105 bits (261), Expect = 6e-22 Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 7/187 (3%) Frame = +1 Query: 466 DDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDI----IKILEAPVSVQGVRFLQ 633 D KE + HLEELR RI +++ A +I F F +DI I+ L+ ++V G Sbjct: 2 DKKETHLIGHLEELRRRIIVTLAAFFLFLITAFLFVQDIYDWLIRDLDGKLAVLG----- 56 Query: 634 LSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVL---GSSVLF 804 P E + + +SG C + PV Y++ FV P LTK ERK ++ G LF Sbjct: 57 --PSEILWVYMMLSGICAIAASIPVAAYQLWRFVAPALTKTERKVTIMYIMYIPGLFALF 114 Query: 805 YLGILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLL 984 GI F Y +L P L+F + + G E++++ D+YF F++ L G F++P++ + L Sbjct: 115 LAGISFGYFVLFPIVLSFLTHLSSGHFETMFTADRYFRFMVNLSLPFGFLFEMPLVVMFL 174 Query: 985 GQVGIVS 1005 ++GI++ Sbjct: 175 TRLGILN 181
>O05523:TATCY_BACSU Sec-independent protein translocase protein tatCy - Bacillus subtilis| Length = 254 Score = 102 bits (255), Expect = 3e-21 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 1/202 (0%) Frame = +1 Query: 475 EMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFF 654 +MS+ +H+ ELR R+ I LA I F +K II L+ + + + + Sbjct: 8 QMSLLEHIAELRKRLLIVALAFVVFFIAGFFLAKPIIVYLQETDEAKQLTLNAFNLTDPL 67 Query: 655 FTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTI 834 + ++ + G+++ SPVILY++ AFV PGL + ERK + S +LF G+ FSY I Sbjct: 68 YVFMQFAFIIGIVLTSPVILYQLWAFVSPGLYEKERKVTLSYIPVSILLFLAGLSFSYYI 127 Query: 835 LAPAALNFFVNYAEGA-VESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSE 1011 L P ++F ++ V + I++YF F+L L GL FQ+PVI + L ++GIV+ Sbjct: 128 LFPFVVDFMKRISQDLNVNQVIGINEYFHFLLQLTIPFGLLFQMPVILMFLTRLGIVTPM 187 Query: 1012 QMLSIWRYXXXXXXXXXXXLTP 1077 + I +Y +TP Sbjct: 188 FLAKIRKYAYFTLLVIAALITP 209
>P66895:TATC_MYCTU Sec-independent protein translocase protein tatC homolog -| Mycobacterium tuberculosis Length = 308 Score = 101 bits (251), Expect = 8e-21 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 19/228 (8%) Frame = +1 Query: 469 DKEMSIFDHLEELRARIFISVLAV-GASIIGCFAFSKDIIKI-----------------L 594 D MS+ DHL ELR R+ IS+ A+ +I G +S I + Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSA 81 Query: 595 EAPVSVQG-VRFLQLSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFL 771 A +S G R L +P + F LKV G+++ PV Y++ AF+ PGL + ER+F Sbjct: 82 RADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFA 141 Query: 772 GPIVLGSSVLFYLGILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGL 951 V+ ++VLF G + +Y +L+ AL F + + S D+YF F+L LL G+ Sbjct: 142 VAFVIPAAVLFVAGAVLAYLVLS-KALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGV 200 Query: 952 SFQVPVIQLLLGQVGIVSSEQMLSIWRYXXXXXXXXXXXLTPSTDPLT 1095 SF+ P++ ++L G+++ E++ S R TP +DP + Sbjct: 201 SFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIFTPGSDPFS 248
>P66896:TATC_MYCBO Sec-independent protein translocase protein tatC homolog -| Mycobacterium bovis Length = 308 Score = 101 bits (251), Expect = 8e-21 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 19/228 (8%) Frame = +1 Query: 469 DKEMSIFDHLEELRARIFISVLAV-GASIIGCFAFSKDIIKI-----------------L 594 D MS+ DHL ELR R+ IS+ A+ +I G +S I + Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSA 81 Query: 595 EAPVSVQG-VRFLQLSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFL 771 A +S G R L +P + F LKV G+++ PV Y++ AF+ PGL + ER+F Sbjct: 82 RADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFA 141 Query: 772 GPIVLGSSVLFYLGILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGL 951 V+ ++VLF G + +Y +L+ AL F + + S D+YF F+L LL G+ Sbjct: 142 VAFVIPAAVLFVAGAVLAYLVLS-KALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGV 200 Query: 952 SFQVPVIQLLLGQVGIVSSEQMLSIWRYXXXXXXXXXXXLTPSTDPLT 1095 SF+ P++ ++L G+++ E++ S R TP +DP + Sbjct: 201 SFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIFTPGSDPFS 248
>P54078:TATC_MYCLE Sec-independent protein translocase protein tatC homolog -| Mycobacterium leprae Length = 310 Score = 100 bits (249), Expect = 1e-20 Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 19/228 (8%) Frame = +1 Query: 469 DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILE----------------- 597 D MS+ DHL ELR R+ IS+ A+ + I F + I LE Sbjct: 22 DATMSLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSA 81 Query: 598 -APVSVQG-VRFLQLSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFL 771 A +S G R L +P + F +KV G+++ SPV Y++ AF+ PGL ER+F Sbjct: 82 RADISPDGQCRLLATAPFDQFMLRIKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFT 141 Query: 772 GPIVLGSSVLFYLGILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGL 951 V+ ++VLF G + +Y +L+ AL F + G + S D+YF F+L LL G+ Sbjct: 142 VAFVVPAAVLFAGGTVLAYLVLS-KALGFLLIVGSGVQVTALSGDRYFGFLLNLLVVFGV 200 Query: 952 SFQVPVIQLLLGQVGIVSSEQMLSIWRYXXXXXXXXXXXLTPSTDPLT 1095 SF+ P++ ++L G+++ +++ S R TP +DP + Sbjct: 201 SFEFPLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFS 248
>Q9PHT8:TATC_CAMJE Sec-independent protein translocase protein tatC homolog -| Campylobacter jejuni Length = 245 Score = 100 bits (249), Expect = 1e-20 Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 7/209 (3%) Frame = +1 Query: 493 HLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSV------QGVRFLQLSPGEFF 654 HL ELR R+FISV + I CFA I+ IL+AP+ + V +++ E Sbjct: 8 HLIELRKRLFISVACIVVMFIVCFALRSYILDILKAPLIAVLPEVAKHVNVIEVQ--EAL 65 Query: 655 FTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTI 834 FT +KVS + + PVI ++ FV PGL +E++ + P V +S++F G F Y + Sbjct: 66 FTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKRLVVPFVSFASIMFAFGACFCYFV 125 Query: 835 LAPAALNFFVNYA-EGAVESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGIVSSE 1011 + P A F +N+ + +I Y +F ++ + GL+F++PVI ++G++ Sbjct: 126 VVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVVVAFGLAFEMPVIAFFFAKIGLIDDS 185 Query: 1012 QMLSIWRYXXXXXXXXXXXLTPSTDPLTQ 1098 + +R +TP D L+Q Sbjct: 186 FLKRHFRIAVLVIFVFSAFMTP-PDVLSQ 213
>Q9Z9P4:YDIJ_BACHD Uncharacterized protein BH0553 - Bacillus halodurans| Length = 253 Score = 94.7 bits (234), Expect = 8e-19 Identities = 61/208 (29%), Positives = 108/208 (51%), Gaps = 4/208 (1%) Frame = +1 Query: 466 DDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGV---RFLQL 636 ++++MS+ DH+ ELR RI I V+ +++ F + +I L+ + Q + F Sbjct: 2 NERDMSLMDHIAELRRRILIIVVFFVIALVVGFFLATPMITYLQGAPTAQDLPMNAFKLT 61 Query: 637 SPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGI 816 P + T S + ++ P+ILY++ AFV PGL ++ERK + + LF G+ Sbjct: 62 DPLRVYMTFAFTSAF---ILVFPIILYQLWAFVSPGLHENERKATLAYIPIAFFLFLGGL 118 Query: 817 LFSYTILAPAALNFFVNYAEGA-VESIWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQV 993 F+Y IL P + F AE + ++ I++YF F+ + G+ FQ+PV+ + L ++ Sbjct: 119 SFAYFILFPFLIQFIGGLAERLHINELYGINEYFTFLFQITMPFGVLFQLPVVVMFLTRL 178 Query: 994 GIVSSEQMLSIWRYXXXXXXXXXXXLTP 1077 GIV+ E + S+ +Y +TP Sbjct: 179 GIVTPEFLRSVRKYAFFVLLVVAGFITP 206
>O21266:YMF16_RECAM Uncharacterized tatC-like protein ymf16 - Reclinomonas americana| Length = 260 Score = 80.5 bits (197), Expect = 2e-14 Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 6/176 (3%) Frame = +1 Query: 484 IFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFFFTT 663 I HL E+R RI + ++ + + + ++I +L P+S F+ E F T Sbjct: 7 ILTHLYEIRLRIIYLLYSIFLTCFCSYQYKEEIFYLLFIPLSKN---FIYTDLIEAFITY 63 Query: 664 LKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTILAP 843 +K+S G+ + P+ LY+I +F++PG E+K + L S L++LG Y +L P Sbjct: 64 IKLSIIVGIYLSYPIFLYQIWSFLIPGFFLYEKKLFRLLCLTSIFLYFLGSCIGYYLLFP 123 Query: 844 AALNFFVNYAEGAVESIWSID------QYFEFVLVLLFSTGLSFQVPVIQLLLGQV 993 A FF+ + + + +++I+ +Y L+FS + FQ+PV+ L L ++ Sbjct: 124 IAFTFFLGFQKLGKDQLFTIELQAKIHEYLILNTKLIFSLSICFQLPVLILFLFKI 179
>Q9ZCG6:TATC_RICPR Sec-independent protein translocase protein tatC homolog - Rickettsia| prowazekii Length = 251 Score = 80.5 bits (197), Expect = 2e-14 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Frame = +1 Query: 472 KEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVS------VQGVRFLQ 633 K S +HL E + R+ A C+ FS I L P++ V+ + + Sbjct: 2 KLYSFQEHLLEFKIRLLRIFTAFIIIFAICYYFSDYIYSFLLEPLAKLSGDTVRNIIYTG 61 Query: 634 LSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLG 813 L+ E FFT +K+S + I P+I E F+ PGL + E+K + I+ S +LF+ G Sbjct: 62 LT--EAFFTYIKLSAFTAFTIIIPIIALECYLFISPGLYRHEKKIIAFILFMSPILFWCG 119 Query: 814 ILFSYTILAPAALNFFVNY--AEGAVESIWS--IDQYFEFVLVLLFSTGLSFQVPVIQLL 981 +F + + P A NFF+++ + V I I +Y V+ L+ + G++FQ+P++ ++ Sbjct: 120 SIFVFYFVMPKAWNFFLSFEKRDMIVPIILEARISEYLNLVIHLIIAFGIAFQLPIVIIV 179 Query: 982 LGQVGIVSSEQMLSIWRYXXXXXXXXXXXLTP 1077 L + IV ++ + R LTP Sbjct: 180 LNILKIVKTQTLKKKRRIAVVINFIIAGILTP 211
>P38459:YMF16_MARPO Uncharacterized tatC-like protein ymf16 - Marchantia polymorpha| (Liverwort) Length = 244 Score = 44.7 bits (104), Expect = 0.001 Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 8/171 (4%) Frame = +1 Query: 496 LEELRARIFISVLAVGASIIGCFAFSKDIIKILEAP---VSVQGVRFLQLSPGEFFFTTL 666 LEE+R R+F ++ + C+ FS++ I +L P + F+ E T + Sbjct: 9 LEEVRIRVFWILICFSFTWFTCYWFSEEFIFLLAKPFLTLPYLDSSFICTQLTEALSTYV 68 Query: 667 KVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVLGSSVLFYLGILFSYTILAPA 846 S P + Y+I F++P +++RK + S F+L ++ + P Sbjct: 69 TTSLISCFYFLFPFLSYQIWCFLMPSCYEEQRKKYNKLFYLSGFCFFLFFFVTFVWIVPN 128 Query: 847 ALNFFVNYAEGAVESIW-----SIDQYFEFVLVLLFSTGLSFQVPVIQLLL 984 +F + + + I Y + +LF + + QVPV+ + L Sbjct: 129 VWHFLYKLSTTSTNLLIIKLQPKIFDYIMLTVRILFISSICSQVPVLVICL 179
>P93312:YMF16_ARATH Uncharacterized tatC-like protein ymf16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 280 Score = 43.1 bits (100), Expect = 0.003 Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 7/191 (3%) Frame = +1 Query: 433 NFLYPSKELLPDDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSV 612 N+LY S E ++ L E+R R ++ +G + C+ FS+++I +L P Sbjct: 2 NYLYISYEF-----NFALETILGEVRIRSVRILIGLGLTWFTCYWFSEELIFLLALPFLT 56 Query: 613 Q--GVRFLQLSPGEFFFTTLKVSGYCGLLIGSPVILYEIIAFVLPGLTKDERKFLGPIVL 786 + F+ E F T + S P+I Y+I F++P ++R Sbjct: 57 LPFDLYFVCTQLTEAFSTFVATSSIACSYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFY 116 Query: 787 GSSVLFYLGILFSYTILAPAALNFFVNYAEGAVESIW-----SIDQYFEFVLVLLFSTGL 951 S F+L + + + + P +F + S+ I Y + + F + + Sbjct: 117 LSGFCFFLFLFLTLSWVVPNVWHFLYFVGATSTNSLMIKLQPKIYDYIMLTVRISFISSV 176 Query: 952 SFQVPVIQLLL 984 QVPVI + L Sbjct: 177 CSQVPVIVICL 187
>O43900:LMO6_HUMAN LIM domain only protein 6 - Homo sapiens (Human)| Length = 615 Score = 35.0 bits (79), Expect = 0.72 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Frame = +1 Query: 115 PRETMGSAGALLSRP--PPQLGSILLRRHHISLPHLSSCTPEPLHCRRRHLRCSAVEGSS 288 PR T+ + A RP PP R HH + H + P RRRH +C A GS Sbjct: 486 PRRTLSAPPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPS----RRRHYQCDAGSGSD 541 Query: 289 GQDTNLPASQREESPSSSLGATLQD 363 + + SPSSS + +D Sbjct: 542 SESCS-------SSPSSSSSESSED 559
>O26973:Y887_METTH UPF0104 membrane protein MTH_887 - Methanobacterium| thermoautotrophicum Length = 351 Score = 33.5 bits (75), Expect = 2.1 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +1 Query: 472 KEMSIFDHLEELRARIFISVLAVGASI--IGCFAFSKDIIKILE 597 +E S+FD++ E R I +S LAV I IG FA DI++ LE Sbjct: 5 EESSVFDYIRENRRTIVLSFLAVAVVIFLIGFFAGFGDILRALE 48
>P38102:Y4757_PSEAE Uncharacterized membrane protein PA4757 - Pseudomonas aeruginosa| Length = 216 Score = 33.1 bits (74), Expect = 2.7 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 10/79 (12%) Frame = +1 Query: 610 VQGVRFLQLSPGEFFFTTLKVS-------GY---CGLLIGSPVILYEIIAFVLPGLTKDE 759 V GV F+ L PG L S GY CG+ +G V++ V L + Sbjct: 13 VLGVVFVILLPGPNSLFVLATSAQRGVATGYRAACGVFLGDAVLMLLSALGVASLLKAEP 72 Query: 760 RKFLGPIVLGSSVLFYLGI 816 F+G LG++ LFYLG+ Sbjct: 73 MLFIGLKYLGAAYLFYLGV 91
>Q12176:MAK21_YEAST Ribosome biogenesis protein MAK21 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1025 Score = 33.1 bits (74), Expect = 2.7 Identities = 14/67 (20%), Positives = 37/67 (55%) Frame = +1 Query: 277 EGSSGQDTNLPASQREESPSSSLGATLQDPLAGRVENGSFEDVTQEDQSSLYNFLYPSKE 456 E +S +++ +PA ++E + S+ +T++ ++NGS ++ ++++L + P E Sbjct: 126 ESTSSKESKIPAQEKEHAQSNIASSTIEKTSQESIDNGSEQEENTVEEANLSSDQEPESE 185 Query: 457 LLPDDKE 477 +K+ Sbjct: 186 SAEKEKK 192
>P27372:ICTA_SYNY3 Inorganic carbon transport protein - Synechocystis sp. (strain PCC| 6803) Length = 80 Score = 32.7 bits (73), Expect = 3.6 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = +1 Query: 787 GSSVLFYLGILFSYTILAPAALNFFVNYAEGAVESIWSIDQYFEFVLVLLFSTGLSFQVP 966 G + YLG+ +Y ++ PA L +++ S+ + YF LV LF GL P Sbjct: 13 GLLAIIYLGLSLAYLLVFPALLYWYLQKRWYVASSVERLVMYF---LVFLFFPGLLVLSP 69 Query: 967 VIQL 978 V+ L Sbjct: 70 VLNL 73
>Q15772:SPEG_HUMAN Striated muscle preferentially expressed protein kinase - Homo| sapiens (Human) Length = 3223 Score = 32.0 bits (71), Expect = 6.1 Identities = 13/51 (25%), Positives = 28/51 (54%) Frame = -2 Query: 258 VPAAAVEGLGRA*GQMGKGDVVATEEDTAELRWRAGEQRSCASHGLSRELD 106 + ++ + R G++ +V T +DTA + W+ G+ R+ ++ L R +D Sbjct: 2666 ITSSCTVAVARVPGKLAPPEVTQTYQDTALVLWKPGDSRAPCTYTLERRVD 2716
>O18214:MAB3_CAEEL Protein male abnormal 3 - Caenorhabditis elegans| Length = 290 Score = 31.6 bits (70), Expect = 8.0 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = +1 Query: 1 GRKHIRGAREEKKKVWKQHLHGTGCSKQKIIGLSPIELPRETMGSAGALLSRPPPQLGSI 180 G++ R +R + K + + + T QKIIG S P T + LS PP S Sbjct: 150 GKEPKRNSRRKSKDMDMEMMVVTATDGQKIIGTSASPSPSSTTDTMSPSLSMSPPCSPSP 209 Query: 181 LLRRHHISL 207 LL ++ ++L Sbjct: 210 LLAQYTLTL 218 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 239,605,203 Number of extensions: 5371981 Number of successful extensions: 14709 Number of sequences better than 10.0: 33 Number of HSP's gapped: 14666 Number of HSP's successfully gapped: 33 Length of query: 452 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 335 Effective length of database: 68,593,924 Effective search space: 22978964540 Effective search space used: 22978964540 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
