ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf25b18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001049668.1| Oryza sativa (japonica cultivar-group) Os01g... 729 0.0
2dbj|AK067297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 729 0.0
3dbj|AB050885.1| Oryza sativa (japonica cultivar-group) OsTATC mR... 729 0.0
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 285 2e-73
5dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic D... 285 2e-73
6ref|NM_126173.3| Arabidopsis thaliana APG2 (ALBINO AND PALE GREE... 66 4e-07
7gb|AY056347.1| Arabidopsis thaliana putative TATC protein (At2g0... 66 4e-07
8gb|AF360172.1| Arabidopsis thaliana putative TATC protein (At2g0... 66 4e-07
9gb|AC006837.16| Arabidopsis thaliana chromosome 2 BAC F23H14 gen... 66 4e-07
10gb|AY084784.1| Arabidopsis thaliana clone 117779 mRNA, complete ... 66 4e-07
11dbj|AB054096.1| Arabidopsis thaliana apg2 mRNA for cpTatC, compl... 66 4e-07
12emb|BX820614.1|CNS0A9P2 Arabidopsis thaliana Full-length cDNA Co... 66 4e-07
13emb|BX821288.1|CNS0A98C Arabidopsis thaliana Full-length cDNA Co... 66 4e-07
14gb|AF145045.1|AF145045 Arabidopsis thaliana TATC mRNA, complete cds 66 4e-07
15emb|CT983436.1| partial cDNA sequence from a Lambda ZAP II norma... 64 1e-06
16emb|BX819534.1|CNS0A9W3 Arabidopsis thaliana Full-length cDNA Co... 64 1e-06
17emb|BX819468.1|CNS0A9WM Arabidopsis thaliana Full-length cDNA Co... 64 1e-06
18emb|BX819191.1|CNS0A9X4 Arabidopsis thaliana Full-length cDNA Co... 64 1e-06
19emb|BX820908.1|CNS0A9P4 Arabidopsis thaliana Full-length cDNA Co... 64 1e-06
20emb|CT981178.1| partial cDNA sequence from a Lambda ZAP II norma... 60 2e-05
21gb|AF284759.1|AF284759 Pisum sativum TatC (tatC) mRNA, complete ... 58 9e-05
22emb|BX821977.1|CNS0AAB7 Arabidopsis thaliana Full-length cDNA Co... 58 9e-05
23emb|BX821937.1|CNS0A966 Arabidopsis thaliana Full-length cDNA Co... 56 3e-04
24ref|NM_001054568.1| Oryza sativa (japonica cultivar-group) Os02g... 46 0.33
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.33
26dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.33
27dbj|AK105446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.33
28dbj|AK101108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.33
29ref|XM_546528.2| PREDICTED: Canis familiaris similar to SNF1-lik... 44 1.3
30emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-7... 44 1.3
31emb|AL928654.1|CNS08CBD Human chromosome 14 DNA sequence BAC R-5... 44 1.3
32ref|XM_001019692.1| Tetrahymena thermophila SB210 hypothetical p... 42 5.2
33ref|XM_001158904.1| PREDICTED: Pan troglodytes MEGF10 protein, t... 42 5.2
34ref|XM_001158953.1| PREDICTED: Pan troglodytes MEGF10 protein, t... 42 5.2
35ref|XM_517907.2| PREDICTED: Pan troglodytes MEGF10 protein, tran... 42 5.2
36ref|XM_624213.2| PREDICTED: Apis mellifera similar to outspread ... 42 5.2
37gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome 42 5.2
38ref|XM_001097941.1| PREDICTED: Macaca mulatta similar to MEGF10 ... 42 5.2
39gb|AC150388.2| Branchiostoma floridae clone CH302-106N18, comple... 42 5.2
40gb|AC165344.3| Mus musculus BAC clone RP23-390P7 from chromosome... 42 5.2
41gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosom... 42 5.2
42gb|AF411806.1| Lycopersicon esculentum BAC clone Clemson_Id 2O7,... 42 5.2
43gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, comp... 42 5.2
44gb|AC008682.6| Homo sapiens chromosome 5 clone CTB-54G2, complet... 42 5.2
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.2
46gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome... 42 5.2
47gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosom... 42 5.2
48gb|AC026800.4|AC026800 Homo sapiens chromosome 5 clone CTD-2377N... 42 5.2
49emb|CR749437.1| Homo sapiens mRNA; cDNA DKFZp781K1852 (from clon... 42 5.2
50dbj|AB110698.1| Oryzias latipes OlGC-R2 gene for guanylyl cyclas... 42 5.2
51gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 42 5.2
52ref|XM_668438.1| Plasmodium berghei strain ANKA hypothetical pro... 42 5.2
53emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327... 42 5.2
54emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on ch... 42 5.2
55ref|NM_032446.1| Homo sapiens multiple EGF-like-domains 10 (MEGF... 42 5.2

>ref|NM_001049668.1| Oryza sativa (japonica cultivar-group) Os01g0501700 (Os01g0501700)
            mRNA, complete cds
          Length = 1397
 Score =  729 bits (368), Expect = 0.0
 Identities = 656/752 (87%)
 Strand = Plus / Plus

                                                                        
Query: 412  gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 471
            ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 529  gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 588

                                                                        
Query: 472  aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 531
            ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 589  aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 648

                                                                        
Query: 532  ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 591
            ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 649  ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 708

                                                                        
Query: 592  cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 651
            || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 709  ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 768

                                                                        
Query: 652  ttctttacaacattgaaggtttctggttattgtggcctcctaatcggaagtcctgtaatt 711
            |||||||||||||||||||| ||||||||||||||||| ||| | || |||||||| |||
Sbjct: 769  ttctttacaacattgaaggtctctggttattgtggccttctacttgggagtcctgttatt 828

                                                                        
Query: 712  ttgtatgagatcatagcatttgttctccctggtttaaccaaggatgagcggaaattccta 771
             |||||||||| |||||||||||||| || |||||||| | |||||| || |||||||||
Sbjct: 829  ctgtatgagataatagcatttgttcttccgggtttaacaagggatgaacgtaaattccta 888

                                                                        
Query: 772  gggcccattgttttgggttcttcagttctgttctaccttggcattttattctcctacact 831
            |||||||||||| |||| ||||| || || ||||||||||||||||| ||||||||||| 
Sbjct: 889  gggcccattgttctgggctcttctgtactattctaccttggcattttcttctcctacacg 948

                                                                        
Query: 832  attcttgctccagcggcattgaactttttcgtgaattatgccgagggagcggtggaatcg 891
             |||||||||| || |||||||| || |||||||| || || || || || |||||||||
Sbjct: 949  gttcttgctcctgcagcattgaatttcttcgtgaactacgcagatggggcagtggaatcg 1008

                                                                        
Query: 892  atatggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagggtta 951
             ||||||| || || ||||| |||||||| || ||||||||| | ||||||||||| |||
Sbjct: 1009 ttatggtcgattgatcagtattttgagtttgtgcttgtgcttttattcagcacaggatta 1068

                                                                        
Query: 952  tcttttcaggtgcctgtgatccagctgttgctggggcaagttggaattgtttccagtgaa 1011
            ||||||||||| ||||| ||||||||  ||||||||||||| ||  | ||||| ||||| 
Sbjct: 1069 tcttttcaggtccctgttatccagctactgctggggcaagtcggtttggtttctagtgac 1128

                                                                        
Query: 1012 caaatgctctcaatctggaggtatgttgttgttggcgcggtggttgctgcggctgtgctt 1071
            |||||||| || |||||||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 1129 caaatgctttccatctggagatatgttgttgttggcgctgtagttgctgctgctgtgctt 1188

                                                                        
Query: 1072 acgccctcgactgatcccttgactcagatgctcttggcgggtccactgcttggtctgtac 1131
            || || ||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 1189 acaccgtcgacagatccgttgactcagatgctcttggctggtccgctgcttggcctgtac 1248

                                            
Query: 1132 ttgggtggtgcgtggatggtcaggctaactgg 1163
            ||||||||||| |||||||||| |||||||||
Sbjct: 1249 ttgggtggtgcttggatggtcaagctaactgg 1280



to top

>dbj|AK067297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104L23, full
            insert sequence
          Length = 1401

 Score =  729 bits (368), Expect = 0.0
 Identities = 656/752 (87%)
 Strand = Plus / Plus

                                                                        
Query: 412  gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 471
            ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 531  gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 590

                                                                        
Query: 472  aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 531
            ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 591  aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 650

                                                                        
Query: 532  ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 591
            ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 651  ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 710

                                                                        
Query: 592  cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 651
            || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 711  ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 770

                                                                        
Query: 652  ttctttacaacattgaaggtttctggttattgtggcctcctaatcggaagtcctgtaatt 711
            |||||||||||||||||||| ||||||||||||||||| ||| | || |||||||| |||
Sbjct: 771  ttctttacaacattgaaggtctctggttattgtggccttctacttgggagtcctgttatt 830

                                                                        
Query: 712  ttgtatgagatcatagcatttgttctccctggtttaaccaaggatgagcggaaattccta 771
             |||||||||| |||||||||||||| || |||||||| | |||||| || |||||||||
Sbjct: 831  ctgtatgagataatagcatttgttcttccgggtttaacaagggatgaacgtaaattccta 890

                                                                        
Query: 772  gggcccattgttttgggttcttcagttctgttctaccttggcattttattctcctacact 831
            |||||||||||| |||| ||||| || || ||||||||||||||||| ||||||||||| 
Sbjct: 891  gggcccattgttctgggctcttctgtactattctaccttggcattttcttctcctacacg 950

                                                                        
Query: 832  attcttgctccagcggcattgaactttttcgtgaattatgccgagggagcggtggaatcg 891
             |||||||||| || |||||||| || |||||||| || || || || || |||||||||
Sbjct: 951  gttcttgctcctgcagcattgaatttcttcgtgaactacgcagatggggcagtggaatcg 1010

                                                                        
Query: 892  atatggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagggtta 951
             ||||||| || || ||||| |||||||| || ||||||||| | ||||||||||| |||
Sbjct: 1011 ttatggtcgattgatcagtattttgagtttgtgcttgtgcttttattcagcacaggatta 1070

                                                                        
Query: 952  tcttttcaggtgcctgtgatccagctgttgctggggcaagttggaattgtttccagtgaa 1011
            ||||||||||| ||||| ||||||||  ||||||||||||| ||  | ||||| ||||| 
Sbjct: 1071 tcttttcaggtccctgttatccagctactgctggggcaagtcggtttggtttctagtgac 1130

                                                                        
Query: 1012 caaatgctctcaatctggaggtatgttgttgttggcgcggtggttgctgcggctgtgctt 1071
            |||||||| || |||||||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 1131 caaatgctttccatctggagatatgttgttgttggcgctgtagttgctgctgctgtgctt 1190

                                                                        
Query: 1072 acgccctcgactgatcccttgactcagatgctcttggcgggtccactgcttggtctgtac 1131
            || || ||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 1191 acaccgtcgacagatccgttgactcagatgctcttggctggtccgctgcttggcctgtac 1250

                                            
Query: 1132 ttgggtggtgcgtggatggtcaggctaactgg 1163
            ||||||||||| |||||||||| |||||||||
Sbjct: 1251 ttgggtggtgcttggatggtcaagctaactgg 1282



to top

>dbj|AB050885.1| Oryza sativa (japonica cultivar-group) OsTATC mRNA, complete cds
          Length = 1781

 Score =  729 bits (368), Expect = 0.0
 Identities = 656/752 (87%)
 Strand = Plus / Plus

                                                                        
Query: 412  gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 471
            ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 861  gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 920

                                                                        
Query: 472  aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 531
            ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 921  aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 980

                                                                        
Query: 532  ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 591
            ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 981  ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 1040

                                                                        
Query: 592  cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 651
            || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 1041 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 1100

                                                                        
Query: 652  ttctttacaacattgaaggtttctggttattgtggcctcctaatcggaagtcctgtaatt 711
            |||||||||||||||||||| ||||||||||||||||| ||| | || |||||||| |||
Sbjct: 1101 ttctttacaacattgaaggtctctggttattgtggccttctacttgggagtcctgttatt 1160

                                                                        
Query: 712  ttgtatgagatcatagcatttgttctccctggtttaaccaaggatgagcggaaattccta 771
             |||||||||| |||||||||||||| || |||||||| | |||||| || |||||||||
Sbjct: 1161 ctgtatgagataatagcatttgttcttccgggtttaacaagggatgaacgtaaattccta 1220

                                                                        
Query: 772  gggcccattgttttgggttcttcagttctgttctaccttggcattttattctcctacact 831
            |||||||||||| |||| ||||| || || ||||||||||||||||| ||||||||||| 
Sbjct: 1221 gggcccattgttctgggctcttctgtactattctaccttggcattttcttctcctacacg 1280

                                                                        
Query: 832  attcttgctccagcggcattgaactttttcgtgaattatgccgagggagcggtggaatcg 891
             |||||||||| || |||||||| || |||||||| || || || || || |||||||||
Sbjct: 1281 gttcttgctcctgcagcattgaatttcttcgtgaactacgcagatggggcagtggaatcg 1340

                                                                        
Query: 892  atatggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagggtta 951
             ||||||| || || ||||| |||||||| || ||||||||| | ||||||||||| |||
Sbjct: 1341 ttatggtcgattgatcagtattttgagtttgtgcttgtgcttttattcagcacaggatta 1400

                                                                        
Query: 952  tcttttcaggtgcctgtgatccagctgttgctggggcaagttggaattgtttccagtgaa 1011
            ||||||||||| ||||| ||||||||  ||||||||||||| ||  | ||||| ||||| 
Sbjct: 1401 tcttttcaggtccctgttatccagctactgctggggcaagtcggtttggtttctagtgac 1460

                                                                        
Query: 1012 caaatgctctcaatctggaggtatgttgttgttggcgcggtggttgctgcggctgtgctt 1071
            |||||||| || |||||||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 1461 caaatgctttccatctggagatatgttgttgttggcgctgtagttgctgctgctgtgctt 1520

                                                                        
Query: 1072 acgccctcgactgatcccttgactcagatgctcttggcgggtccactgcttggtctgtac 1131
            || || ||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 1521 acaccgtcgacagatccgttgactcagatgctcttggctggtccgctgcttggcctgtac 1580

                                            
Query: 1132 ttgggtggtgcgtggatggtcaggctaactgg 1163
            ||||||||||| |||||||||| |||||||||
Sbjct: 1581 ttgggtggtgcttggatggtcaagctaactgg 1612



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  285 bits (144), Expect = 2e-73
 Identities = 231/260 (88%)
 Strand = Plus / Minus

                                                                            
Query: 412      gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 471
                ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 17340183 gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 17340124

                                                                            
Query: 472      aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 531
                ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 17340123 aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 17340064

                                                                            
Query: 532      ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 591
                ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 17340063 ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 17340004

                                                                            
Query: 592      cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 651
                || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 17340003 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 17339944

                                    
Query: 652      ttctttacaacattgaaggt 671
                ||||||||||||||||||||
Sbjct: 17339943 ttctttacaacattgaaggt 17339924



 Score =  252 bits (127), Expect = 3e-63
 Identities = 253/295 (85%)
 Strand = Plus / Minus

                                                                            
Query: 668      aggtttctggttattgtggcctcctaatcggaagtcctgtaattttgtatgagatcatag 727
                |||| ||||||||||||||||| ||| | || |||||||| ||| |||||||||| ||||
Sbjct: 17338699 aggtctctggttattgtggccttctacttgggagtcctgttattctgtatgagataatag 17338640

                                                                            
Query: 728      catttgttctccctggtttaaccaaggatgagcggaaattcctagggcccattgttttgg 787
                |||||||||| || |||||||| | |||||| || ||||||||||||||||||||| |||
Sbjct: 17338639 catttgttcttccgggtttaacaagggatgaacgtaaattcctagggcccattgttctgg 17338580

                                                                            
Query: 788      gttcttcagttctgttctaccttggcattttattctcctacactattcttgctccagcgg 847
                | ||||| || || ||||||||||||||||| |||||||||||  |||||||||| || |
Sbjct: 17338579 gctcttctgtactattctaccttggcattttcttctcctacacggttcttgctcctgcag 17338520

                                                                            
Query: 848      cattgaactttttcgtgaattatgccgagggagcggtggaatcgatatggtcaatagacc 907
                ||||||| || |||||||| || || || || || ||||||||| ||||||| || || |
Sbjct: 17338519 cattgaatttcttcgtgaactacgcagatggggcagtggaatcgttatggtcgattgatc 17338460

                                                                       
Query: 908      agtactttgagttcgtacttgtgcttctgttcagcacagggttatcttttcaggt 962
                |||| |||||||| || ||||||||| | ||||||||||| ||||||||||||||
Sbjct: 17338459 agtattttgagtttgtgcttgtgcttttattcagcacaggattatcttttcaggt 17338405



 Score =  210 bits (106), Expect = 1e-50
 Identities = 181/206 (87%)
 Strand = Plus / Minus

                                                                            
Query: 958      caggtgcctgtgatccagctgttgctggggcaagttggaattgtttccagtgaacaaatg 1017
                ||||| ||||| ||||||||  ||||||||||||| ||  | ||||| ||||| ||||||
Sbjct: 17337667 caggtccctgttatccagctactgctggggcaagtcggtttggtttctagtgaccaaatg 17337608

                                                                            
Query: 1018     ctctcaatctggaggtatgttgttgttggcgcggtggttgctgcggctgtgcttacgccc 1077
                || || |||||||| ||||||||||||||||| || |||||||| ||||||||||| || 
Sbjct: 17337607 ctttccatctggagatatgttgttgttggcgctgtagttgctgctgctgtgcttacaccg 17337548

                                                                            
Query: 1078     tcgactgatcccttgactcagatgctcttggcgggtccactgcttggtctgtacttgggt 1137
                ||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 17337547 tcgacagatccgttgactcagatgctcttggctggtccgctgcttggcctgtacttgggt 17337488

                                          
Query: 1138     ggtgcgtggatggtcaggctaactgg 1163
                ||||| |||||||||| |||||||||
Sbjct: 17337487 ggtgcttggatggtcaagctaactgg 17337462



to top

>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1080D07
          Length = 173856

 Score =  285 bits (144), Expect = 2e-73
 Identities = 231/260 (88%)
 Strand = Plus / Minus

                                                                          
Query: 412    gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 471
              ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 106444 gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 106385

                                                                          
Query: 472    aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 531
              ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 106384 aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 106325

                                                                          
Query: 532    ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 591
              ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 106324 ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 106265

                                                                          
Query: 592    cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 651
              || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 106264 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 106205

                                  
Query: 652    ttctttacaacattgaaggt 671
              ||||||||||||||||||||
Sbjct: 106204 ttctttacaacattgaaggt 106185



 Score =  252 bits (127), Expect = 3e-63
 Identities = 253/295 (85%)
 Strand = Plus / Minus

                                                                          
Query: 668    aggtttctggttattgtggcctcctaatcggaagtcctgtaattttgtatgagatcatag 727
              |||| ||||||||||||||||| ||| | || |||||||| ||| |||||||||| ||||
Sbjct: 104960 aggtctctggttattgtggccttctacttgggagtcctgttattctgtatgagataatag 104901

                                                                          
Query: 728    catttgttctccctggtttaaccaaggatgagcggaaattcctagggcccattgttttgg 787
              |||||||||| || |||||||| | |||||| || ||||||||||||||||||||| |||
Sbjct: 104900 catttgttcttccgggtttaacaagggatgaacgtaaattcctagggcccattgttctgg 104841

                                                                          
Query: 788    gttcttcagttctgttctaccttggcattttattctcctacactattcttgctccagcgg 847
              | ||||| || || ||||||||||||||||| |||||||||||  |||||||||| || |
Sbjct: 104840 gctcttctgtactattctaccttggcattttcttctcctacacggttcttgctcctgcag 104781

                                                                          
Query: 848    cattgaactttttcgtgaattatgccgagggagcggtggaatcgatatggtcaatagacc 907
              ||||||| || |||||||| || || || || || ||||||||| ||||||| || || |
Sbjct: 104780 cattgaatttcttcgtgaactacgcagatggggcagtggaatcgttatggtcgattgatc 104721

                                                                     
Query: 908    agtactttgagttcgtacttgtgcttctgttcagcacagggttatcttttcaggt 962
              |||| |||||||| || ||||||||| | ||||||||||| ||||||||||||||
Sbjct: 104720 agtattttgagtttgtgcttgtgcttttattcagcacaggattatcttttcaggt 104666



 Score =  210 bits (106), Expect = 1e-50
 Identities = 181/206 (87%)
 Strand = Plus / Minus

                                                                          
Query: 958    caggtgcctgtgatccagctgttgctggggcaagttggaattgtttccagtgaacaaatg 1017
              ||||| ||||| ||||||||  ||||||||||||| ||  | ||||| ||||| ||||||
Sbjct: 103928 caggtccctgttatccagctactgctggggcaagtcggtttggtttctagtgaccaaatg 103869

                                                                          
Query: 1018   ctctcaatctggaggtatgttgttgttggcgcggtggttgctgcggctgtgcttacgccc 1077
              || || |||||||| ||||||||||||||||| || |||||||| ||||||||||| || 
Sbjct: 103868 ctttccatctggagatatgttgttgttggcgctgtagttgctgctgctgtgcttacaccg 103809

                                                                          
Query: 1078   tcgactgatcccttgactcagatgctcttggcgggtccactgcttggtctgtacttgggt 1137
              ||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 103808 tcgacagatccgttgactcagatgctcttggctggtccgctgcttggcctgtacttgggt 103749

                                        
Query: 1138   ggtgcgtggatggtcaggctaactgg 1163
              ||||| |||||||||| |||||||||
Sbjct: 103748 ggtgcttggatggtcaagctaactgg 103723



to top

>ref|NM_126173.3| Arabidopsis thaliana APG2 (ALBINO AND PALE GREEN 2) (APG2) mRNA,
           complete cds
          Length = 1690

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 889 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 941



to top

>gb|AY056347.1| Arabidopsis thaliana putative TATC protein (At2g01110) mRNA,
           complete cds
          Length = 1053

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 748 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 800



to top

>gb|AF360172.1| Arabidopsis thaliana putative TATC protein (At2g01110) mRNA,
           complete cds
          Length = 1277

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 768 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 820



to top

>gb|AC006837.16| Arabidopsis thaliana chromosome 2 BAC F23H14 genomic sequence, complete
             sequence
          Length = 91268

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 895   tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
             ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 83150 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 83098



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1129  tacttgggtggtgcgtggatggtca 1153
             |||||||||||||| ||||||||||
Sbjct: 82827 tacttgggtggtgcatggatggtca 82803



to top

>gb|AY084784.1| Arabidopsis thaliana clone 117779 mRNA, complete sequence
          Length = 1279

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 889 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 941



to top

>dbj|AB054096.1| Arabidopsis thaliana apg2 mRNA for cpTatC, complete cds
          Length = 1023

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 748 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 800



to top

>emb|BX820614.1|CNS0A9P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH52ZF05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1254

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 842 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 894



to top

>emb|BX821288.1|CNS0A98C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL32ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1164

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 812 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 864



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1129 tacttgggtggtgcgtggatggtca 1153
            |||||||||||||| ||||||||||
Sbjct: 1046 tacttgggtggtgcatggatggtca 1070



to top

>gb|AF145045.1|AF145045 Arabidopsis thaliana TATC mRNA, complete cds
          Length = 1023

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 748 tggtctatcgaccagtactttgagtttgtactagtgcttatgttcagcacagg 800



to top

>emb|CT983436.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 822

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 244/312 (78%), Gaps = 2/312 (0%)
 Strand = Plus / Plus

                                                                       
Query: 652 ttctttacaacattgaaggtttctggttattgtggcctcctaatcggaagtcctgtaatt 711
           ||||||||||| |||||||||||||| || ||||| || ||  | ||||| ||||| |||
Sbjct: 1   ttctttacaactttgaaggtttctggatactgtggtcttctcctaggaagccctgttatt 60

                                                                       
Query: 712 ttgtatgagatcatagcatttgttctccctggtttaaccaaggatgagcggaaattccta 771
            | |||||||| ||||| |||||||| || ||| |||| || |  ||  | |  ||||| 
Sbjct: 61  ctctatgagattatagcgtttgttcttccaggtctaacgaaagcagaaagaaggttcctt 120

                                                                       
Query: 772 gggcccattgttttgggttcttcagttctgttctaccttggcattttattctcctacact 831
           ||||| |||||||| || ||||| || || |||||   |||||||  |||||||||| ||
Sbjct: 121 gggcctattgttttagggtcttctgtacttttctatgctggcattgcattctcctac-ct 179

                                                                       
Query: 832 a-ttcttgctccagcggcattgaactttttcgtgaattatgccgagggagcggtggaatc 890
           | ||||| ||||||| || ||||| || || |||| |||||| || || || || || ||
Sbjct: 180 agttcttactccagcagccttgaatttctttgtgagttatgcggaaggggccgttgagtc 239

                                                                       
Query: 891 gatatggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagggtt 950
             | ||||| || || || ||||||||||| || || |||||  |||||||||||||  |
Sbjct: 240 actgtggtccattgatcaatactttgagtttgtgctagtgctcatgttcagcacaggtct 299

                       
Query: 951 atcttttcaggt 962
           |||||| |||||
Sbjct: 300 atctttccaggt 311



to top

>emb|BX819534.1|CNS0A9W3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB87ZF12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1284

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 904 gaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 865 gaccagtactttgagtttgtactagtgcttatgttcagcacagg 908



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1129 tacttgggtggtgcgtggatggtca 1153
            |||||||||||||| ||||||||||
Sbjct: 1091 tacttgggtggtgcatggatggtca 1115



to top

>emb|BX819468.1|CNS0A9WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB80ZB04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1173

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 904 gaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 819 gaccagtactttgagtttgtactagtgcttatgttcagcacagg 862



to top

>emb|BX819191.1|CNS0A9X4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB55ZC02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1317

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 904 gaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 867 gaccagtactttgagtttgtactagtgcttatgttcagcacagg 910



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1129 tacttgggtggtgcgtggatggtca 1153
            |||||||||||||| ||||||||||
Sbjct: 1092 tacttgggtggtgcatggatggtca 1116



to top

>emb|BX820908.1|CNS0A9P4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH80ZD02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1254

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 904 gaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||||||||||||||| ||||| |||||| |||||||||||||
Sbjct: 831 gaccagtactttgagtttgtactagtgcttatgttcagcacagg 874



to top

>emb|CT981178.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 822

 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 652 ttctttacaacattgaaggtttctggttattgtggcctcctaatcggaagtcctgtaatt 711
           ||||||||||| |||||||||||||| || ||||| || ||  | ||||| ||||| |||
Sbjct: 1   ttctttacaactttgaaggtttctggatactgtggtcttctcctaggaagccctgttatt 60

                                     
Query: 712 ttgtatgagatcatagcatttgttct 737
            | |||||||| ||||| ||||||||
Sbjct: 61  ctctatgagattatagcgtttgttct 86



to top

>gb|AF284759.1|AF284759 Pisum sativum TatC (tatC) mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1352

 Score = 58.0 bits (29), Expect = 9e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 434 attttctttatccaagcaaagagctacttccagatgataaggaaatgagtatatttgatc 493
           ||||||||||||| || |||||||| || || |||||||| || ||||| ||||||||||
Sbjct: 473 attttctttatcctagtaaagagcttctacccgatgataaagagatgagcatatttgatc 532

            
Query: 494 a 494
           |
Sbjct: 533 a 533



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 99/123 (80%)
 Strand = Plus / Plus

                                                                        
Query: 844  gcggcattgaactttttcgtgaattatgccgagggagcggtggaatcgatatggtcaata 903
            |||||||| || || || || ||||| ||||| || || || |||||  ||||||| || 
Sbjct: 883  gcggcattaaatttctttgtcaattacgccgaaggcgctgttgaatcattatggtccatt 942

                                                                        
Query: 904  gaccagtactttgagttcgtacttgtgcttctgttcagcacagggttatcttttcaggtg 963
            || || ||||||||||| || || || ||| ||||||||||||| || ||||| ||||||
Sbjct: 943  gatcaatactttgagtttgttctggttcttatgttcagcacaggcttgtctttccaggtg 1002

               
Query: 964  cct 966
            |||
Sbjct: 1003 cct 1005



 Score = 50.1 bits (25), Expect = 0.021
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 616 ggtgtccgatttttgcagctctcccctggagaatttttctttacaacattgaaggtttct 675
           |||||||||||| | |||||  | ||||| ||||||||||| || || || ||||| |||
Sbjct: 655 ggtgtccgatttcttcagcttgctcctggtgaatttttcttcaccactttaaaggtgtct 714

                            
Query: 676 ggttattgtggcctcct 692
           || || |||||||||||
Sbjct: 715 ggatactgtggcctcct 731



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1129 tacttgggtggtgcgtggatggtca 1153
            |||||||||||||| ||||||||||
Sbjct: 1168 tacttgggtggtgcatggatggtca 1192



to top

>emb|BX821977.1|CNS0AAB7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL89ZF12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 645

 Score = 58.0 bits (29), Expect = 9e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 895 tggtcaatagaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||| || ||||||||||||||||| ||||| || ||| |||||||||||||
Sbjct: 137 tggtctatcgaccagtactttgagtttgtactagtccttatgttcagcacagg 189



to top

>emb|BX821937.1|CNS0A966 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL86ZB11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1298

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 904 gaccagtactttgagttcgtacttgtgcttctgttcagcacagg 947
           ||||||||||||||||| ||||| |||||| ||||||| |||||
Sbjct: 877 gaccagtactttgagtttgtactagtgcttatgttcagaacagg 920



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1129 tacttgggtggtgcgtggatggtca 1153
            |||||||||||||| ||||||||||
Sbjct: 1103 tacttgggtggtgcatggatggtca 1127



to top

>ref|NM_001054568.1| Oryza sativa (japonica cultivar-group) Os02g0733300 (Os02g0733300)
            mRNA, complete cds
          Length = 2071

 Score = 46.1 bits (23), Expect = 0.33
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1048 gcggtggttgctgcggctgtgct 1070
            |||||||||||||||||||||||
Sbjct: 253  gcggtggttgctgcggctgtgct 275



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.33
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 1048     gcggtggttgctgcggctgtgct 1070
                |||||||||||||||||||||||
Sbjct: 30592199 gcggtggttgctgcggctgtgct 30592221



to top

>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score = 46.1 bits (23), Expect = 0.33
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1048   gcggtggttgctgcggctgtgct 1070
              |||||||||||||||||||||||
Sbjct: 104207 gcggtggttgctgcggctgtgct 104229



to top

>dbj|AK105446.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B05, full
            insert sequence
          Length = 2067

 Score = 46.1 bits (23), Expect = 0.33
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1048 gcggtggttgctgcggctgtgct 1070
            |||||||||||||||||||||||
Sbjct: 248  gcggtggttgctgcggctgtgct 270



to top

>dbj|AK101108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025E01, full
            insert sequence
          Length = 2072

 Score = 46.1 bits (23), Expect = 0.33
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1048 gcggtggttgctgcggctgtgct 1070
            |||||||||||||||||||||||
Sbjct: 254  gcggtggttgctgcggctgtgct 276



to top

>ref|XM_546528.2| PREDICTED: Canis familiaris similar to SNF1-like kinase 2
            (LOC489410), mRNA
          Length = 4306

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 229  cccgagcccctccactgccgcc 250
            ||||||||||||||||||||||
Sbjct: 2648 cccgagcccctccactgccgcc 2669



to top

>emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-731F5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176237

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 274    gttgaggggagcagcggccaggacac 299
              |||||||||||||| |||||||||||
Sbjct: 127206 gttgaggggagcaggggccaggacac 127231



to top

>emb|AL928654.1|CNS08CBD Human chromosome 14 DNA sequence BAC R-521B24 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 211509

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 274    gttgaggggagcagcggccaggacac 299
              |||||||||||||| |||||||||||
Sbjct: 208914 gttgaggggagcaggggccaggacac 208889



to top

>ref|XM_001019692.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00136110)
            mRNA, complete cds
          Length = 3573

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 423  tagtctatataattttcttta 443
            |||||||||||||||||||||
Sbjct: 2972 tagtctatataattttcttta 2952



to top

>ref|XM_001158904.1| PREDICTED: Pan troglodytes MEGF10 protein, transcript variant 2
            (MEGF10), mRNA
          Length = 7394

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 734  ttctccctggtttaaccaagg 754
            |||||||||||||||||||||
Sbjct: 4926 ttctccctggtttaaccaagg 4906



to top

>ref|XM_001158953.1| PREDICTED: Pan troglodytes MEGF10 protein, transcript variant 3
            (MEGF10), mRNA
          Length = 7646

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 734  ttctccctggtttaaccaagg 754
            |||||||||||||||||||||
Sbjct: 5178 ttctccctggtttaaccaagg 5158



to top

>ref|XM_517907.2| PREDICTED: Pan troglodytes MEGF10 protein, transcript variant 4
            (MEGF10), mRNA
          Length = 7529

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 734  ttctccctggtttaaccaagg 754
            |||||||||||||||||||||
Sbjct: 5061 ttctccctggtttaaccaagg 5041



to top

>ref|XM_624213.2| PREDICTED: Apis mellifera similar to outspread CG3479-PA, isoform A
            (LOC551828), mRNA
          Length = 2355

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1239 ggtgattggtccgagtggtca 1259
            |||||||||||||||||||||
Sbjct: 877  ggtgattggtccgagtggtca 897



to top

>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome
          Length = 7750108

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 729     atttgttctccctggtttaac 749
               |||||||||||||||||||||
Sbjct: 2764192 atttgttctccctggtttaac 2764212



to top

>ref|XM_001097941.1| PREDICTED: Macaca mulatta similar to MEGF10 protein (LOC703899), mRNA
          Length = 7508

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 734  ttctccctggtttaaccaagg 754
            |||||||||||||||||||||
Sbjct: 5061 ttctccctggtttaaccaagg 5041



to top

>gb|AC150388.2| Branchiostoma floridae clone CH302-106N18, complete sequence
          Length = 148532

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 1198   attctgtgttagtgtactactagaaaccatagc 1230
              ||||||||| ||||||| || ||||||||||||
Sbjct: 106831 attctgtgtgagtgtacaacgagaaaccatagc 106863



to top

>gb|AC165344.3| Mus musculus BAC clone RP23-390P7 from chromosome 16, complete sequence
          Length = 193532

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 513    gaggatatttatatctgtatt 533
              |||||||||||||||||||||
Sbjct: 164808 gaggatatttatatctgtatt 164788



to top

>gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosome 12, complete
             sequence
          Length = 174908

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 569   tctccaaagatataattaaga 589
             |||||||||||||||||||||
Sbjct: 97304 tctccaaagatataattaaga 97324



to top

>gb|AF411806.1| Lycopersicon esculentum BAC clone Clemson_Id 2O7, partial sequence
          Length = 61382

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1035 tgttgttgttggcgcggtggttgct 1059
            |||||||||||||||||| ||||||
Sbjct: 1575 tgttgttgttggcgcggttgttgct 1599



to top

>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence
          Length = 192282

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 734   ttctccctggtttaaccaagg 754
             |||||||||||||||||||||
Sbjct: 27672 ttctccctggtttaaccaagg 27652



to top

>gb|AC008682.6| Homo sapiens chromosome 5 clone CTB-54G2, complete sequence
          Length = 217221

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 734   ttctccctggtttaaccaagg 754
             |||||||||||||||||||||
Sbjct: 42997 ttctccctggtttaaccaagg 43017



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 354      cctccaagatccacttgcagg 374
                |||||||||||||||||||||
Sbjct: 26047695 cctccaagatccacttgcagg 26047715



to top

>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence
          Length = 147109

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 201   ctcccttccccatctgtcctc 221
             |||||||||||||||||||||
Sbjct: 27850 ctcccttccccatctgtcctc 27870



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 201   ctcccttccccatctgtcctc 221
             |||||||||||||||||||||
Sbjct: 27905 ctcccttccccatctgtcctc 27925



to top

>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence
          Length = 213468

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   ctcccttccccatctgtcctc 221
             |||||||||||||||||||||
Sbjct: 31303 ctcccttccccatctgtcctc 31283



 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   ctcccttccccatctgtcctc 221
             |||||||||||||||||||||
Sbjct: 31358 ctcccttccccatctgtcctc 31338



to top

>gb|AC026800.4|AC026800 Homo sapiens chromosome 5 clone CTD-2377N4, complete sequence
          Length = 146206

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 734   ttctccctggtttaaccaagg 754
             |||||||||||||||||||||
Sbjct: 34151 ttctccctggtttaaccaagg 34171



to top

>emb|CR749437.1| Homo sapiens mRNA; cDNA DKFZp781K1852 (from clone DKFZp781K1852)
          Length = 7582

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 734  ttctccctggtttaaccaagg 754
            |||||||||||||||||||||
Sbjct: 5104 ttctccctggtttaaccaagg 5084



to top

>dbj|AB110698.1| Oryzias latipes OlGC-R2 gene for guanylyl cyclase, exon 1-25,
            complete cds
          Length = 28608

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 68   ctggctgtagcaagcagaaaa 88
            |||||||||||||||||||||
Sbjct: 5084 ctggctgtagcaagcagaaaa 5064



to top

>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 26      gggaggagaagaagaaggtct 46
               |||||||||||||||||||||
Sbjct: 1011332 gggaggagaagaagaaggtct 1011312



to top

>ref|XM_668438.1| Plasmodium berghei strain ANKA hypothetical protein (PB001094.03.0)
           partial mRNA
          Length = 483

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 428 tatataattttctttatccaa 448
           |||||||||||||||||||||
Sbjct: 54  tatataattttctttatccaa 34



to top

>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161806

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   cctccaagatccacttgcagg 374
             |||||||||||||||||||||
Sbjct: 63976 cctccaagatccacttgcagg 63956



to top

>emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on chromosome 4, complete
              sequence
          Length = 224344

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     gggaggagaagaagaaggtct 46
              |||||||||||||||||||||
Sbjct: 156644 gggaggagaagaagaaggtct 156624



to top

>ref|NM_032446.1| Homo sapiens multiple EGF-like-domains 10 (MEGF10), mRNA
 dbj|AB058676.1| Homo sapiens mRNA for MEGF10 protein (KIAA1780), complete cds
          Length = 7522

 Score = 42.1 bits (21), Expect = 5.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 734  ttctccctggtttaaccaagg 754
            |||||||||||||||||||||
Sbjct: 5062 ttctccctggtttaaccaagg 5042


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 252,647,676
Number of extensions: 15082929
Number of successful extensions: 327732
Number of sequences better than 10.0: 55
Number of HSP's gapped: 327732
Number of HSP's successfully gapped: 80
Length of query: 1357
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1334
Effective length of database: 18,503,978,556
Effective search space: 24684307393704
Effective search space used: 24684307393704
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top