ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf27m21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9FLS0:FB253_ARATH Putative F-box protein At5g07610 - Arabidopsi... 56 3e-07
2Q9C629:FB35_ARATH Putative F-box protein At1g46840 - Arabidopsis... 41 0.011
3Q94A64:FB251_ARATH F-box protein At5g03970 - Arabidopsis thalian... 40 0.025
4Q9LTF6:FB291_ARATH Putative F-box protein At5g52610 - Arabidopsi... 38 0.13
5O49565:FB239_ARATH Putative F-box protein At4g21240 - Arabidopsi... 37 0.16
6Q1PEN2:FB174_ARATH F-box protein At3g22350 - Arabidopsis thalian... 35 0.62
7Q9LUP9:FB152_ARATH Putative F-box protein At3g17480 - Arabidopsi... 35 1.1
8Q9FZD6:FBL28_ARATH Putative F-box/LRR-repeat protein At1g26505 -... 34 1.4
9Q96EF6:FBX17_HUMAN F-box only protein 17 - Homo sapiens (Human) 34 1.8
10Q9FK54:FB260_ARATH F-box protein At5g18160 - Arabidopsis thalian... 33 3.1
11Q9LHN6:FB141_ARATH Putative F-box protein At3g13624 - Arabidopsi... 33 3.1
12Q9LUS9:FBL44_ARATH Putative F-box/LRR-repeat protein At3g16555 -... 33 4.0
13Q9LUP4:FBK60_ARATH Putative F-box/Kelch-repeat protein At3g17540... 33 4.0
14Q9QZM8:FBX17_MOUSE F-box only protein 17 - Mus musculus (Mouse) 32 5.3
15Q9LJ39:FB185_ARATH Putative F-box protein At3g24700 - Arabidopsi... 32 5.3
16Q6ZNG1:ZN600_HUMAN Zinc finger protein 600 - Homo sapiens (Human) 32 6.9
17P48359:YCF29_CYAPA Probable transcriptional regulator ycf29 - Cy... 32 6.9
18P30182:TOP2_ARATH DNA topoisomerase 2 - Arabidopsis thaliana (Mo... 32 6.9
19Q9LIK3:FB178_ARATH Putative F-box protein At3g22940 - Arabidopsi... 32 6.9
20Q9LUM6:FB157_ARATH F-box protein At3g17710 - Arabidopsis thalian... 32 6.9
21Q9SFC7:FB135_ARATH F-box protein At3g07870 - Arabidopsis thalian... 32 6.9
22Q6AY27:FBX17_RAT F-box only protein 17 - Rattus norvegicus (Rat) 32 9.0
23Q9UKB1:FBW1B_HUMAN F-box/WD repeat protein 11 - Homo sapiens (Hu... 32 9.0
24Q9SD58:FB196_ARATH Putative F-box protein At3g47150 - Arabidopsi... 32 9.0

>Q9FLS0:FB253_ARATH Putative F-box protein At5g07610 - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 420
 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 83/337 (24%), Positives = 134/337 (39%), Gaps = 26/337 (7%)
 Frame = +3

Query: 117  DVLANVLGRLMPRSLAACRSVCKAWCNVVDA---HGLLRKDLLPLSLAGIF------VVY 269
            DVL  +L  L  ++L   + V K W +++        + K   PL ++G F      + Y
Sbjct: 36   DVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSNRVIKSNHPLPISGFFLHSPREIKY 95

Query: 270  RFVDDMHLPPAFLSRPSFVGKIQGNLGYLDDVHDSWSHMTGHCNGLLLLWGGVA------ 431
             FV         L   +   +I  +L      H +   +    NGLLL     A      
Sbjct: 96   SFVS--------LDDDATNQRISSSLPLWFTDHQTDMIIMQSTNGLLLCKCSCASSNHFN 147

Query: 432  ------NPATRQWVSLPLPDWIGIKGFVERDWLAFDPTVSPHFEVFSMQCVSRRYENQAE 593
                  NP T+Q+  L       I G +    LAFDP+ SPH++VF   C+  R  N   
Sbjct: 148  TNYYVYNPTTKQYTLLHQ-----IAGHIALS-LAFDPSRSPHYKVF---CLRGRSNNSF- 197

Query: 594  LVPANPNSEWPPSPYIISAFSSETWRWEQRSFVREGTAPRSIDPKLLPLMKDVFSHDAVY 773
                  +S      Y I  +SS    W  R  V   T+P +     +     VF + AV 
Sbjct: 198  ------SSASDSELYHIEVYSSNEGLW--RRVVPVPTSPST----FIEFSYSVFWNGAVN 245

Query: 774  WRGRLYVYNIFFIIRLDLEDNKYRVIQLPPTINE----APADILPHLGKSEKGVYY-GFA 938
            W    Y ++    +  D+   + +++ LP   +E        IL  L +S+  +YY    
Sbjct: 246  W----YGFSSRDCLSFDINTQEIKILPLPDHEHEDEPLPDPRILMFLDESQGNLYYIEVN 301

Query: 939  HSNWCNFQVWFLNESIDHTEWMLKLEIDLKPLLENFP 1049
            + +  N +V+ +    + + W +K  +DL+PL   FP
Sbjct: 302  NQSSSNLRVYEMES--NSSSWSVKYNVDLEPLAAAFP 336



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>Q9C629:FB35_ARATH Putative F-box protein At1g46840 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 475

 Score = 41.2 bits (95), Expect = 0.011
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
 Frame = +3

Query: 108 LHGDVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDL-LPLSLAGIFVVYRFVDD 284
           LH D++  +L RL  +S+A CR V K W +++ +   +   L   LS   I+  +RF   
Sbjct: 31  LHIDLVIEILSRLSAKSIAICRCVSKQWNSLLVSQDFVESFLRSSLSRPRIWFTFRFDGK 90

Query: 285 MHLPPAFLSRPSFVGKIQGNLGYLDDVHDSWSH----------------MTGHCNGLLLL 416
            +    F S P    K   NL      H   S+                M+ +  G+   
Sbjct: 91  WN----FFSSPQ-PQKFGNNLSVEATEHHMGSYENWYMKSCQSVHGFIFMSYNSKGMTDR 145

Query: 417 WGGVANPATRQWVSLPL--PDWIGIKGFVERDWLAFDPTVSPHFEVFSMQCVSRR 575
              + NP TRQ ++LP   P+ +    F      A+DPT    F+V  M  V+++
Sbjct: 146 TQVIWNPCTRQLITLPKLEPENLDFNSF-----FAYDPT-EKQFKVLCMTVVNKQ 194



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>Q94A64:FB251_ARATH F-box protein At5g03970 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 418

 Score = 40.0 bits (92), Expect = 0.025
 Identities = 87/369 (23%), Positives = 138/369 (37%), Gaps = 32/369 (8%)
 Frame = +3

Query: 24   SATLRTHLAACSFAPRAQSLVNMDPEGLLHGDVLANVLGRLMPRSLAACRSVCKAWCNVV 203
            SA L+T+L   S A     ++N +       D +  +L  L P ++     V K W  ++
Sbjct: 4    SARLKTNLGMTS-ALSTHEVLNSN-------DTMCEILILLPPETIYKLILVSKRWLEII 55

Query: 204  DA----HGLLRKDLLPLSLAGIFV-----VYRFVDDMHLPPA-----FLSRPSFVGKIQG 341
             +    H  L K      L G FV     + R +D    P A      LS  S   +I+ 
Sbjct: 56   ASPCFRHTYLAKWKPNFELIGFFVCSSMYLGRRIDGTRRPRAEPSLPLLSTSSIGDEIES 115

Query: 342  N-----LGYLDDVHDSWSHMTGHCNGLLLLWGGVANPATRQWVSLPLPDWIGIKGFVERD 506
            +     LGY  D  D    + G       LW    +P+T++   LP P            
Sbjct: 116  SGILKKLGYYIDSADGLL-LCGRHPKAYYLW----DPSTQKQQQLPRP------------ 158

Query: 507  WLAFDPTVSPHFEVFSMQCVSRRYENQ--------AELVPANPNSEWPPSPYIISAFSSE 662
                      HFE   M  +S    +Q        AE V    NS    +   +  FSS+
Sbjct: 159  --------RVHFEELCMSLISEDSPDQGFSYKVVRAECVAFPVNS----TKVKVETFSSK 206

Query: 663  TWRWEQRSFVREGTAPRSIDP-KLLPLMKDVFSHDAVYWR---GRLYVYNIFFIIRLDLE 830
            T  W     +        ++P  L P          VYW    G++ +Y+       + E
Sbjct: 207  TSTWSYSELI-------CLEPLSLSPWTPGRVIKGVVYWHARGGKIAIYDS------NSE 253

Query: 831  DNKYRVIQLPPTINEAPADILPHLGKSEKG-VYYGFAHSNWCNFQVWFLNESIDHTEWML 1007
            + +  VI+LP T +         LG+++ G + YG+  SN    +VW L +  +  EW L
Sbjct: 254  EKRIDVIKLPKTYDYDEQV----LGETDDGSLQYGW--SNKSVMEVWKLEKVGNVLEWNL 307

Query: 1008 KLEIDLKPL 1034
              +++ K +
Sbjct: 308  LFKVNFKAM 316



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>Q9LTF6:FB291_ARATH Putative F-box protein At5g52610 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 351

 Score = 37.7 bits (86), Expect = 0.13
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
 Frame = +3

Query: 105 LLHGDVLANVLGRLMPRSLAACRSVCKAWC---------NVVDAHGLLRKDLLPLSLAGI 257
           ++  D+L  +L RL  + LA C  VCK W          N+  +    R+  +  +L  I
Sbjct: 1   MISEDLLVEILLRLPVKPLARCLCVCKLWATIIRSRYFINLYQSRSSTRQPYVMFALRDI 60

Query: 258 FVVYRFVDDMHLPPAFLSRPSFVGKIQGNLGYLDDVHDSWSHMTGHCNGLLL------LW 419
           F   R+    H   +  S+PS V K   +        ++ SH     NGL+       LW
Sbjct: 61  FTSCRW----HFFSS--SQPSLVTKATCSA-------NNSSHTPDCVNGLICVEYMSQLW 107

Query: 420 GGVANPATRQWVSLP 464
             ++NPATR+ V +P
Sbjct: 108 --ISNPATRKGVLVP 120



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>O49565:FB239_ARATH Putative F-box protein At4g21240 - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 417

 Score = 37.4 bits (85), Expect = 0.16
 Identities = 73/320 (22%), Positives = 120/320 (37%), Gaps = 22/320 (6%)
 Frame = +3

Query: 117  DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDLLPLSLAGIFVVYRFVDDMHLP 296
            D++ ++L RL  +S    R V K W ++      +R    P S     +      DM L 
Sbjct: 39   DMIPDILLRLPAKSAVRFRIVSKLWLSITTRPYFIRSFAFPSSTRLCLMACVKARDMRL- 97

Query: 297  PAFLSRPSFVGKIQGNLGYLDDV------HDSWSHMTGHCNGL--------LLLWGGVAN 434
              F+S         G+  ++D        HD ++  +   NGL        +++W    N
Sbjct: 98   --FISLHQHD---DGSYAHVDRCEIKSPKHDYYNPSSESVNGLVCFGDFYNIVVW----N 148

Query: 435  PATRQWVSLPLPDWIGIKGFVERDWLAFDPTVSPHFEVFSMQCVSRRYENQAELVPANPN 614
            P+ RQ V+LP P       +  R  L +DP V   ++V S+      Y N          
Sbjct: 149  PSMRQHVTLPEPKPHSTVRYFIRSCLGYDP-VEDKYKVLSIS----GYHNGNH------- 196

Query: 615  SEWPPSPYIISAFSSETWRWEQRSFVREGTAPRSIDPKLLPLMKDVFSHDAVYWRG--RL 788
                  P + +    E+WR  Q S       P  I             +  VY+    R 
Sbjct: 197  -----DPLVFTLGPQESWRVIQNS-------PLDIPLPTGGSRVGTCINGHVYYEAQIRF 244

Query: 789  YVYNIF----FIIRLDLEDNKYRVIQLP--PTINEAPADILPHLGKSEKGVYYGFAHSNW 950
             V +IF     ++  D+   K+  I+ P  PT+      +L + GK        +  S++
Sbjct: 245  KVDDIFNFENILMSFDVRYEKFNTIKKPADPTLRNF---MLNYQGK------LAWFCSDY 295

Query: 951  CNFQVWFLNESIDHTEWMLK 1010
             + + W L++  D  EW LK
Sbjct: 296  SSIRFWVLDDG-DKQEWSLK 314



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>Q1PEN2:FB174_ARATH F-box protein At3g22350 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 241

 Score = 35.4 bits (80), Expect = 0.62
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRK--DLLPLSLAGIFVVYRFVDDMH 290
           D++  +L R+   SL   RS CK W  +       +K   + P     + +    V  M+
Sbjct: 7   DLVEEILSRVSATSLKRLRSTCKQWNTLFKKRSFSQKHFHIAPKESMVLMLKEYRVCSMN 66

Query: 291 LPPAFLSRPSFVGKIQGNLGYLDDVHDSWSHM----TGHCNGLLL 413
           +    +S PS   + QG LG  DD H +   +      HC+GLLL
Sbjct: 67  I-NLNVSPPSV--EFQGTLGIKDDSHSNLGQVEIVEVYHCDGLLL 108



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>Q9LUP9:FB152_ARATH Putative F-box protein At3g17480 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 374

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 18/138 (13%)
 Frame = +3

Query: 96  PEGLLHGDVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKD------------LLP 239
           P  +L  D++ ++L R+   SL   RS CK W  +++    ++K             L  
Sbjct: 8   PMSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDMLLRS 67

Query: 240 LSLAGIFVVYRFVDDMHLPPAFLSRPSFVGKIQGNLGYLDDVHDSWSHMTGHCNGLLLLW 419
           L ++ + V    + D   P   L R   +  +  N G ++      S    HCNGLLL  
Sbjct: 68  LRVSSMSVNLHGLHDNIDPSIELKRELNLKGLLCNSGKVE------SFEVFHCNGLLLFT 121

Query: 420 GG----VANPATRQ--WV 455
                 V NP T Q  W+
Sbjct: 122 NTSTIVVWNPCTGQTKWI 139



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>Q9FZD6:FBL28_ARATH Putative F-box/LRR-repeat protein At1g26505 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 366

 Score = 34.3 bits (77), Expect = 1.4
 Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 9/231 (3%)
 Frame = +3

Query: 381  HMTGHC---NGLLLLWGG----VANPATRQWVSLPLPDWIGIKGFVERDWLAFDPTVSPH 539
            HM  +C   NGL+ +  G    V NP+T ++++LP    +  K  + + +  +DP  S  
Sbjct: 126  HMEYYCHYVNGLISVGYGREQIVTNPSTGRFITLPS---VRTKRRLVKSFFGYDPA-SDQ 181

Query: 540  FEVFSMQCVSRRYENQAELVPANPNSEWPPSPYIISAFSSETWRWEQRSFVREGTAPRSI 719
            ++V  M    R Y +Q +     P+S+      + +    + W+   R+ +         
Sbjct: 182  YKVLCM--TERLYGHQED-----PSSQHQ----VFTLGVKKPWKMLDRTTI--------- 221

Query: 720  DPKLLPLMKDVFSHDAVYWRGRL-YVYNIFFIIRLDLEDNKYRV-IQLPPTINEAPADIL 893
             P   P    V     VY+  +     +   ++R DL D+   V I LP  I   P+   
Sbjct: 222  -PDHRPWTNGVCIDGVVYYIAKTGQGMSQLSLMRYDLRDDNLNVFISLPEEIR-TPSLYS 279

Query: 894  PHLGKSEKGVYYGFAHSNWCNFQVWFLNESIDHTEWMLKLEIDLKPLLENF 1046
              L   E  +      +++  F VW +++  +  EW+ K+  +++P   +F
Sbjct: 280  DTLLNYEGKLAIAIPVTSYI-FDVWVMDQDGEKHEWLKKITFNIEPWQSSF 329



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>Q96EF6:FBX17_HUMAN F-box only protein 17 - Homo sapiens (Human)|
          Length = 278

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAA-CRSVCKAWCNVVD 206
           ++L  VL  + PRSL   CR VC+AW ++VD
Sbjct: 24  ELLVQVLSHVPPRSLVTRCRPVCRAWRDIVD 54



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>Q9FK54:FB260_ARATH F-box protein At5g18160 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 379

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDLLPLSLAGIFVVYRFVDDMHLP 296
           D+   +L RL  +S+   RSV K W ++      ++      S   + +++R  D +   
Sbjct: 37  DITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKTSPPCVLLIFRKHDKL--- 93

Query: 297 PAFLSRPSFVGKIQGNLGYLDDVH-----DSWSHMTGHCNGLLLLWGG----VANPATRQ 449
               S P      Q    ++ D H     + +       +GL+ L G     + NP  ++
Sbjct: 94  -IVFSSPQH----QNTYSHVQDYHIEIPKNGFIRRLDSVHGLICLEGSKQLVICNPTLKR 148

Query: 450 WVSLPLPDWIG 482
           +  LP P   G
Sbjct: 149 FFPLPEPQGTG 159



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>Q9LHN6:FB141_ARATH Putative F-box protein At3g13624 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 366

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDLLPLSLAGIFVVYRFVDDMHLP 296
           DV+  +L R+   SL+A RS+CK W N +  + +L K  +     G  ++   V  M   
Sbjct: 10  DVVEEILPRVPLTSLSAVRSICKTW-NTLSKNRVLCKAAVKKQFLGFIMMDYRVCSM--- 65

Query: 297 PAFLSRPSFVGKIQGNL-----GYLDDVHDSWSHMTGHCNGLLL 413
             F  R    G +  +L     G LD +  S      HC+GLLL
Sbjct: 66  -KFHLRNDEGGDLVDDLSIKQVGILDQIEIS---EVLHCDGLLL 105



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>Q9LUS9:FBL44_ARATH Putative F-box/LRR-repeat protein At3g16555 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 319

 Score = 32.7 bits (73), Expect = 4.0
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +3

Query: 105 LLHGDVLANVLGRLMPRSLAACRSVCKAWCNVVD 206
           LL  ++  ++L RL PRSL   RSVCK W  + D
Sbjct: 3   LLPWELEEDILSRLPPRSLVQFRSVCKRWNALFD 36



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>Q9LUP4:FBK60_ARATH Putative F-box/Kelch-repeat protein At3g17540 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 396

 Score = 32.7 bits (73), Expect = 4.0
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDL----LPLSLAGIFVVYRFVDD 284
           ++ + +L R+  +SLA   + CK W  +      ++K+       L L   F VY+  DD
Sbjct: 13  EIESEILSRVPTKSLAKLHTTCKRWYALFRDPRFVKKNFGKSERRLMLHSNFGVYKITDD 72

Query: 285 MHLPPAFLSRPSFVGKIQGNLGYLDDVHDSWSHMTGHCNGLLL 413
           +H     L+      +    L  L    D       HC+GL+L
Sbjct: 73  LH---GILNSGDPSLEFTSKLSNLKISEDLTITKIFHCDGLIL 112



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>Q9QZM8:FBX17_MOUSE F-box only protein 17 - Mus musculus (Mouse)|
          Length = 286

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 69  RAQSLVNMDPEGLLHGDVLANVLGRLMPRSLAA-CRSVCKAWCNVVD 206
           R  +L  + PE      +L  VL  + PR+L   CR VC+AW ++VD
Sbjct: 14  RRLALTKLPPE------LLVQVLSHVPPRALVTRCRPVCRAWRDLVD 54



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>Q9LJ39:FB185_ARATH Putative F-box protein At3g24700 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 270

 Score = 32.3 bits (72), Expect = 5.3
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDLLPLSLAGIF---VVYRFVDDM 287
           D+ + +L R+   SL   ++ CK W  +      ++K+L   +   IF     Y   D  
Sbjct: 8   DLESEILSRVPATSLQRLKTTCKRWYALFRDPRFVKKNLGKAATHVIFDNRSGYSMTDIN 67

Query: 288 HLPPAFLSR-------PSFVGKIQGNLGYLDDVHDSWSHMTGHCNGLLL 413
            L  +   R       PS    ++ N+   D  HD  SH+  HC+GLLL
Sbjct: 68  SLIHSINLRGIQNSFDPSIGVDVKLNV-LKDPRHDKISHIISHCDGLLL 115



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>Q6ZNG1:ZN600_HUMAN Zinc finger protein 600 - Homo sapiens (Human)|
          Length = 722

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 993 CDQLIH*GTKPESCTNYCGRTRSKRPSLI 907
           C + +H G KP  C N CG+T S +PSL+
Sbjct: 543 CHRRLHSGEKPYKC-NECGKTFSHKPSLV 570



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>P48359:YCF29_CYAPA Probable transcriptional regulator ycf29 - Cyanophora paradoxa|
          Length = 210

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +3

Query: 3   EAKHRDGSATLRTHLAACSFAPRAQSLVNMDPEGLLHGDVLANV 134
           E K ++    ++++    +F PR QS++N+  EGLL+  + AN+
Sbjct: 130 EKKQKNSFLLIKSNNLKINFTPREQSVLNLVVEGLLNKQIAANL 173



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>P30182:TOP2_ARATH DNA topoisomerase 2 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 1473

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 10/126 (7%)
 Frame = +3

Query: 897  HLGKSEKGVYYGFAHSNW------CNFQVWFLNESIDHTEWMLKLEIDLKPLLENFPWEH 1058
            H G   KG+   F HS W       +F V F+   +  T    K  +    + E   W+ 
Sbjct: 541  HDGSHIKGLLINFIHSFWPSLLQVPSFLVEFITPIVKATRKGTKKVLSFYSMPEYEEWKE 600

Query: 1059 S----HGSWFVQGVRDYDDETLDEEKAFFSNYITSILGFHPYKEIIFLRTSHMRAMAYHL 1226
            S       W ++  +     T +E K +FSN     LG H  K+ ++       A+    
Sbjct: 601  SLKGNATGWDIKYYKGLGTSTAEEGKEYFSN-----LGLHK-KDFVWEDEQDGEAIELAF 654

Query: 1227 SSSKVE 1244
            S  K+E
Sbjct: 655  SKKKIE 660



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>Q9LIK3:FB178_ARATH Putative F-box protein At3g22940 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 412

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
 Frame = +3

Query: 123 LANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDLLPLSLAGIFVVYRFVDDMHLPPA 302
           L  +L RL  +S  A RS CK W ++      + K           VV     ++HL   
Sbjct: 3   LEEILSRLPLKSTRAVRSTCKKWDSLFKNRSFISKAAAAREGESQMVVL-MDHNLHLVSF 61

Query: 303 FLSRPSFVGKIQGNLGYLDDVHDSWS---HMTGHCNGLLL 413
           F    + V +I+G    L+D  DS         HC GLLL
Sbjct: 62  FFGSDTSV-EIKGKRICLNDDSDSEQVKISQVFHCEGLLL 100



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>Q9LUM6:FB157_ARATH F-box protein At3g17710 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 368

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDLL 236
           D+   +L RL PRSL   R+VCK W  +      ++K L+
Sbjct: 9   DLEEEILSRLPPRSLVRFRTVCKHWNGLFSDKRFVKKHLV 48



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>Q9SFC7:FB135_ARATH F-box protein At3g07870 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 417

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLL 221
           D++A++  RL   S+A    VC++W +V+  HG L
Sbjct: 31  DIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRL 65



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>Q6AY27:FBX17_RAT F-box only protein 17 - Rattus norvegicus (Rat)|
          Length = 250

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAA-CRSVCKAWCNVVD 206
           ++L  VL  + PR+L   CR VC+AW ++VD
Sbjct: 24  ELLLQVLSHVPPRALVTRCRPVCRAWRDLVD 54



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>Q9UKB1:FBW1B_HUMAN F-box/WD repeat protein 11 - Homo sapiens (Human)|
          Length = 542

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = +3

Query: 99  EGLLHGDVLANVLGRLMPRSLAACRSVCKAWCNVVDAHGLLRKDLL 236
           +GL H  +  N+L  L  RSL A   VCK W  V+ + G+L K L+
Sbjct: 126 QGLDH--IAENILSYLDARSLCAAELVCKEWQRVI-SEGMLWKKLI 168



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>Q9SD58:FB196_ARATH Putative F-box protein At3g47150 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 311

 Score = 31.6 bits (70), Expect = 9.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 117 DVLANVLGRLMPRSLAACRSVCKAWCNVVDAH 212
           D+  N+L RL  +SL   R V K WC+++ +H
Sbjct: 15  DLQINILLRLPVKSLLRFRCVSKLWCSIITSH 46


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 245,772,648
Number of extensions: 5453469
Number of successful extensions: 13881
Number of sequences better than 10.0: 24
Number of HSP's gapped: 13876
Number of HSP's successfully gapped: 24
Length of query: 493
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 376
Effective length of database: 68,593,924
Effective search space: 25791315424
Effective search space used: 25791315424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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