>P22082:SNF2_YEAST Transcription regulatory protein SNF2 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 1703
 Score = 36.2 bits (82), Expect = 0.29
 Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 10/140 (7%)
 Frame = -2

Query: 626  KSTQKCHPLDGSHGQIKDYPCRRHNNSPKKNNLTLSEEV*IDLVIT--QLFQRKLKSD-- 459
            K   K   +DG+ G+IK       N+ P+ NN++  +    DL +       +K K+   
Sbjct: 1390 KKEDKSEAIDGN-GEIKGENIDADNDGPRINNISAEDRADTDLAMNDDDFLSKKRKAGRP 1448

Query: 458  ---PGHVPPHGKILVRPNGNSLFPICNKSPPAGEITNSPNPRLAAEQKIES---SPRFPS 297
               P  V   G     P      P+   + P+ +  + P PR A +  ++S   S R   
Sbjct: 1449 RGRPKKVKLEGSENSEPPALESSPVTGDNSPSEDFMDIPKPRTAGKTSVKSARTSTRGRG 1508

Query: 296  EQHQYPRARWKGGSAVPEGR 237
                  R R +G    P+ R
Sbjct: 1509 RGRGRGRGRGRGRGRPPKAR 1528

>P42758:XERO2_ARATH Dehydrin Xero 2 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 193

 Score = 36.2 bits (82), Expect = 0.29
 Identities = 16/72 (22%), Positives = 29/72 (40%)
 Frame = +1

Query: 712 EVMPSMIGSVEVSSLHHEAAVSKDDFLISLSANQDERETGSSSSAGPVRISSTHHEPVEF 891
           E +P   G+     +HHE     +  +  L  +    +TG++++ G       HHE    
Sbjct: 48  EQLPGHHGATGTGGVHHEKKGMTEKVMEQLPGHHGSHQTGTNTTYGTTNTGGVHHEKKSV 107

Query: 892 THDLFRNLSANH 927
           T  +   L  +H
Sbjct: 108 TEKVMEKLPGHH 119

>Q92444:CHS2_PARBR Chitin synthase 2 - Paracoccidioides brasiliensis|
          Length = 1043

 Score = 35.4 bits (80), Expect = 0.50
 Identities = 42/144 (29%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
 Frame = -2

Query: 638 STCRKSTQKCHPLDGSHGQIKDYPCRRHNNSPKKN-NLTLSEEV*IDLVITQLFQRKLKS 462
           S  R S Q+CHPLD         P  R ++SP ++ N+T S                L S
Sbjct: 27  SMARPSPQRCHPLDQQSASTSSLPTSRPSSSPGQSPNITPS---------------ILTS 71

Query: 461 DPGHVPPHGKILVRP-------NGNSLFPI----CNKSPPAGEITNSPNPRLAAEQKIES 315
           D  H+P       RP         +   P+     N  PP  EI  SP P      K   
Sbjct: 72  DTLHLPARSVSPTRPWTPSRGSEWSRHMPLSVSSVNYEPP--EINCSPRPG-TPSSKYGG 128

Query: 314 SPRFPSEQHQYPRARWKGGSAVPE 243
           SPR P  Q   P   W   S+  E
Sbjct: 129 SPRRPLRQ---PVVCWPPASSAGE 149

>Q6IQU7:INT12_DANRE Integrator complex subunit 12 - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 479

 Score = 35.0 bits (79), Expect = 0.66
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
 Frame = +1

Query: 628 LQVDPRMLKAVAIEHHKDADSA--VVAVLDEVMPSMIGSVEVSSLHHEAAVSKDDFLISL 801
           L++DP  LK +   H K  DSA  + A+LDE +     S+  +S+  EA VSK    +  
Sbjct: 7   LELDPIFLKGLGYLHSKSKDSAEKLKALLDESLARGSDSIYRNSI-KEAEVSK--VSLPK 63

Query: 802 SANQDERETGSSSSAGPVRISST 870
              QD + + SSS++  +  +S+
Sbjct: 64  MTKQDSKSSSSSSASSSITTTSS 86

>Q5BJK8:GOLP4_RAT Golgi phosphoprotein 4 - Rattus norvegicus (Rat)|
          Length = 653

 Score = 35.0 bits (79), Expect = 0.66
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
 Frame = +1

Query: 619 VLFLQVDPRMLKAVAI----EHHKDADSAVVAVLDEVMPSMIGSVEVSSLHHEAAVSKDD 786
           +L+L++  ++ KA A+    + H+D+ SA + V+ E    +  S++   L H+ A  K+D
Sbjct: 31  MLYLELQTQLRKAEAVALKYQQHQDSLSAQLQVVYEHRSRLEKSLQKERLEHKKA--KED 88

Query: 787 FLISLSANQDERETGSSSSAGPVRISSTHHEPVEFTHDLFR 909
           FL+     Q+    G   S       +  H+ ++  H+  R
Sbjct: 89  FLVYKLEAQETLNKGRQDSNSRYSALNVQHQMLKSQHEELR 129

>Q8BXA1:GOLP4_MOUSE Golgi phosphoprotein 4 - Mus musculus (Mouse)|
          Length = 655

 Score = 35.0 bits (79), Expect = 0.66
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
 Frame = +1

Query: 619 VLFLQVDPRMLKAVAI----EHHKDADSAVVAVLDEVMPSMIGSVEVSSLHHEAAVSKDD 786
           +L+L++  ++ KA A+    + H+D+ SA + V+ E    +  S++   L H+ A  K+D
Sbjct: 31  MLYLELQTQLRKAEAVALKYQQHQDSLSAQLQVVYEHRSRLEKSLQKERLEHKKA--KED 88

Query: 787 FLISLSANQDERETGSSSSAGPVRISSTHHEPVEFTHDLFR 909
           FL+     Q+    G   S       +  H+ ++  H+  R
Sbjct: 89  FLVYKLEAQETLNKGRQDSNSRYSALNVQHQMLKSQHEELR 129

>P01359:TFF2_PIG Trefoil factor 2 precursor - Sus scrofa (Pig)|
          Length = 127

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 24/91 (26%), Positives = 37/91 (40%)
 Frame = -2

Query: 458 PGHVPPHGKILVRPNGNSLFPICNKSPPAGEITNSPNPRLAAEQKIESSPRFPSEQHQYP 279
           PGH PP G + +          C++  P   + N   P + ++Q   S   F S+    P
Sbjct: 7   PGHPPPAGAVCLTGAQKPAACRCSRQDPKNRV-NCGFPGITSDQCFTSGCCFDSQVPGVP 65

Query: 278 RARWKGGSAVPEGRAREVSGRRSCGRPSPNP 186
                  +   E    EVS R++CG P  +P
Sbjct: 66  WCFKPLPAQESEECVMEVSARKNCGYPGISP 96

>Q87YY5:ZIPA_PSESM Cell division protein zipA homolog - Pseudomonas syringae pv.|
           tomato
          Length = 288

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +1

Query: 796 SLSANQDERETGSSSSAGPVRISSTHHEPVEFTHDLFRNLSAN 924
           S S   DE ET S+   GP R+  TH EP    HDL  ++SAN
Sbjct: 42  SFSNLPDEEETTSAEVLGPPRVLDTHKEPQLDEHDL-PSMSAN 83

>Q08D19:GOLP4_XENTR Golgi phosphoprotein 4 - Xenopus tropicalis (Western clawed frog)|
           (Silurana tropicalis)
          Length = 638

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
 Frame = +1

Query: 628 LQVDPRMLKAVAIEH--HKDADSAVVAVLDEVMPSMIGSVEVSSLHHEAAVSKDDFLISL 801
           LQ D +  +AVA+++  H ++ SA + V+ E    +  S++   L H+ A  K+DFL+  
Sbjct: 36  LQNDLKKAEAVALKYQQHHESMSAQLQVVYEHRSRLEKSLQKERLEHKKA--KEDFLVYK 93

Query: 802 SANQDERETGSSSSAGPVRISSTHHEPVEFTHDLFR 909
              Q+    G   S          HE ++  H+  R
Sbjct: 94  LEAQETLNKGRQDSNNRYNALGVQHEMLKSQHEELR 129

>Q5R5Q2:SRRM1_PONPY Serine/arginine repetitive matrix protein 1 - Pongo pygmaeus|
           (Orangutan)
          Length = 917

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 351 KPSPRRRTKNRILPTFPLRATPISPCQMERRIGRT*GKSSRSERKTVMWSPISEP 187
           +PSPRRRT  R +P  P      SP +  RR   +   SS S   +   SP  +P
Sbjct: 320 RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374

>Q8IYB3:SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 - Homo sapiens (Human)|
          Length = 904

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 351 KPSPRRRTKNRILPTFPLRATPISPCQMERRIGRT*GKSSRSERKTVMWSPISEP 187
           +PSPRRRT  R +P  P      SP +  RR   +   SS S   +   SP  +P
Sbjct: 320 RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374

>Q5ZMJ9:SRRM1_CHICK Serine/arginine repetitive matrix protein 1 - Gallus gallus|
           (Chicken)
          Length = 888

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 351 KPSPRRRTKNRILPTFPLRATPISPCQMERRIGRT*GKSSRSERKTVMWSPISEP 187
           +PSPRRRT  R +P  P      SP +  RR   +   SS S   +   SP  +P
Sbjct: 316 RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 370

>Q4ZVF7:ZIPA_PSEU2 Cell division protein zipA homolog - Pseudomonas syringae pv.|
           syringae (strain B728a)
          Length = 287

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +1

Query: 796 SLSANQDERETGSSSSAGPVRISSTHHEPVEFTHDL 903
           S S   DE ET S+   GP R+  TH EP    HDL
Sbjct: 42  SFSNLPDEEETTSAEVLGPPRVLDTHKEPQLDEHDL 77

>Q48KR3:ZIPA_PSE14 Cell division protein zipA homolog - Pseudomonas syringae pv.|
           phaseolicola (strain 1448A / Race 6)
          Length = 289

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +1

Query: 796 SLSANQDERETGSSSSAGPVRISSTHHEPVEFTHDL 903
           S S   DE ET S+   GP R+  TH EP    HDL
Sbjct: 42  SFSNLPDEEETTSAEVLGPPRVLDTHKEPQLDEHDL 77

>Q8G709:SYE_BIFLO Glutamyl-tRNA synthetase - Bifidobacterium longum|
          Length = 506

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -2

Query: 503 DLVITQLFQRKLKSDPGHVPPHGKILVRPNGNSLFPICNKSPPAGEITNSPNPRLAAEQK 324
           D+    L +  ++   G VP +  ++VRPNG+ L+ + N   P  +     N  L  E  
Sbjct: 172 DIAFDDLIRGTIEFKAGSVPDY--VIVRPNGDPLYTLTN---PVDDAMMEVNVVLRGEDL 226

Query: 323 IESSPR 306
           + S+PR
Sbjct: 227 LSSTPR 232

>Q8N3F8:MILK1_HUMAN MICAL-like protein 1 - Homo sapiens (Human)|
          Length = 863

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = -2

Query: 383 SPPAGEITNSPNPRLAAEQKIES--SPRFPSEQHQYPRARWKGGSAVPEGRAREVSGRRS 210
           SPPAG  T  P PR A+E    +  +PR  S   Q       G S++  GR  E+   + 
Sbjct: 295 SPPAGRPT--PAPRKASESTTPAPPTPRPRSSLQQENLVEQAGSSSLVNGRLHELPVPKP 352

Query: 209 CGRPSPNPSSQGIRIGYEVEEPP 141
            G P P+  +   R     ++PP
Sbjct: 353 RGTPKPSEGTPAPR-----KDPP 370

>Q52KI8:SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 - Mus musculus (Mouse)|
          Length = 946

 Score = 32.3 bits (72), Expect = 4.3
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 351 KPSPRRRTKNRILPTFPLRATPISPCQMERRIGRT*GKSSRSERKTVMWSPISEP 187
           +PSPRRRT  R +P  P      SP +  RR   +   SS S   +   SP  +P
Sbjct: 318 RPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKP 372

>Q10370:HMGYB_SOYBN HMG-Y-related protein B - Glycine max (Soybean)|
          Length = 152

 Score = 32.0 bits (71), Expect = 5.5
 Identities = 28/99 (28%), Positives = 42/99 (42%)
 Frame = -2

Query: 470 LKSDPGHVPPHGKILVRPNGNSLFPICNKSPPAGEITNSPNPRLAAEQKIESSPRFPSEQ 291
           +K+DP   P  G+   RP      P      P G + + P PR          P+ P+  
Sbjct: 51  MKADPNAPPKRGR--GRP------PKPKVPLPPGTVVSPPRPR-------GRPPKDPNAP 95

Query: 290 HQYPRARWKGGSAVPEGRAREVSGRRSCGRPSPNPSSQG 174
            + P+A+    +  P GR ++V+  RS   PSP   S G
Sbjct: 96  PKSPKAKATPATGRPRGRPKKVA--RSPAVPSPTAVSTG 132

>Q92GV3:AMPG2_RICCN Putative transporter ampG 2 - Rickettsia conorii|
          Length = 408

 Score = 32.0 bits (71), Expect = 5.6
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 747 DFDRTYHRWHDFVKDGNHSRIGIFMVLYR 661
           DFDR +H ++DFVK      I  FM+LYR
Sbjct: 207 DFDRFWHAFYDFVKKPKWLIIVSFMLLYR 235

>Q00423:HMGYA_SOYBN HMG-Y-related protein A - Glycine max (Soybean)|
          Length = 176

 Score = 31.6 bits (70), Expect = 7.2
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
 Frame = -2

Query: 470 LKSDPGHVPPHGKILVRPNGNSLFPICNKSP-PAGEITNSPNPRLAAEQKIESSPRFPSE 294
           +K+DP   P  G+      G    P   K+P P G + + P PR          P+ P+ 
Sbjct: 75  MKADPNAPPKRGR------GRPPKP---KTPLPPGTVVSPPRPR-------GRPPKDPNA 118

Query: 293 QHQYPRARWKGGSAVPEGRAREVSGRRSCGRPSPNPSSQG 174
             + P+A+   GS  P GR ++V   RS    +P   S G
Sbjct: 119 PPKSPKAKATPGSGRPRGRPKKVP--RSPAVAAPTAVSSG 156

>P87090:CPC1_CRYPA Cross-pathway control protein 1 - Cryphonectria parasitica (Chesnut|
           blight fungus) (Endothia parasitica)
          Length = 247

 Score = 31.6 bits (70), Expect = 7.2
 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
 Frame = -2

Query: 377 PAGEITNSPNPRLAAEQKI-----ESSPRFPSEQHQYPR----ARWKGGSAVPEGRAREV 225
           P  E + +P P LAA   +     E SP   SE  +  R    AR    S+ P GR   V
Sbjct: 106 PDAETSAAPAPALAAPAPVPAAQAEDSPSVDSEDFEPARRPSQARKSSASSSPSGRHSSV 165

Query: 224 SG--RRSCGRPSP 192
           SG   R  G+P P
Sbjct: 166 SGVSARRRGKPLP 178

>Q9V460:SPT5H_DROME Transcription elongation factor SPT5 - Drosophila melanogaster|
           (Fruit fly)
          Length = 1078

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -2

Query: 299 SEQHQYPRARWKGGSAVPEGRAREVSGRRSCGRPSP---NPSSQGIRIGYEVEEPPGKD 132
           S+     R+  +G  +V   R+R  SG    G  SP   +   +    G E EEPPG+D
Sbjct: 29  SKSRSRSRSGSRGSRSVSRSRSRSQSGHSRSGSESPQRRDNRGKSDESGEEEEEPPGED 87

>P02671:FIBA_HUMAN Fibrinogen alpha chain precursor [Contains: Fibrinopeptide A] -|
           Homo sapiens (Human)
          Length = 866

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 38/130 (29%), Positives = 42/130 (32%), Gaps = 23/130 (17%)
 Frame = -2

Query: 494 ITQLFQRKLKSDPGHVPPHGKILV----------RPNGNSLFPICNKSPPAGEITNSP-N 348
           +  L     KS    VPP  K L           RP GN +    + S   G  T SP N
Sbjct: 229 VPDLVPGNFKSQLQKVPPEWKALTDMPQMRMELERPGGNEITRGGSTSYGTGSETESPRN 288

Query: 347 PRLAAEQKIESS------PRFPSEQHQYPRARWKGGSAVPEGRAREVSGRRSCGRP---- 198
           P  A      SS       R P        A WK GS+ P       SG    G      
Sbjct: 289 PSSAGSWNSGSSGPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTGSTGNQN 348

Query: 197 --SPNPSSQG 174
             SP P S G
Sbjct: 349 PGSPRPGSTG 358

>Q7MW49:SYL_PORGI Leucyl-tRNA synthetase - Porphyromonas gingivalis (Bacteroides|
           gingivalis)
          Length = 925

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 11/130 (8%)
 Frame = +1

Query: 175 PWLLGFGDGRPH----DRLPL----TSRALPSGTADPPFHLARGYWCCSEGKRGEDSIFC 330
           P+ + + +G PH    DRLPL      + LP+ + +PP   A G W  +EG   E S   
Sbjct: 490 PFPIYYKEGMPHALDEDRLPLRLPEVDKFLPTESGEPPLGRATG-WHTAEGYPYELSTMP 548

Query: 331 SAARRGFGLLVISPAGGDLLQIGNSEFPFGRTRILP*GGTWPGSD---FSFLWNNWVITR 501
             A      L       D   +  S   + R   L  GGT   +    +S  WN ++   
Sbjct: 549 GFAGSSAYYLRYMDPQNDTALVSRSANEYWRHVDLYIGGTEHATGHLIYSRFWNKFLFDL 608

Query: 502 SIHTSSERVR 531
            I   +E  R
Sbjct: 609 GIVCEAEPFR 618


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 213,016,977
Number of extensions: 4870109
Number of successful extensions: 15020
Number of sequences better than 10.0: 24
Number of HSP's gapped: 14945
Number of HSP's successfully gapped: 24
Length of query: 419
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 303
Effective length of database: 68,868,219
Effective search space: 20867070357
Effective search space used: 20867070357
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)