| Clone Name | FLbaf33m15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ995511.1| Hordeum vulgare clone 509d02_c-84 genomic sequence Length = 13774 Score = 2177 bits (1098), Expect = 0.0 Identities = 1125/1133 (99%), Gaps = 2/1133 (0%) Strand = Plus / Plus Query: 2 atgatgaggatgcacccacacgccctgctgctgctcctcttcctcttctctgttctcgcc 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4565 atgatgaggatgcacccacacgccctgctgctgctcctcttcctcttctctgtcctcgcc 4624 Query: 62 ggcggagccaacgccgagccctctagagagctcacttacaaggattgccaccctgacgac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4625 ggcggagccaacgccgagccctctagagagctcacttacaaggattgccaccctgacgac 4684 Query: 122 aaggcggtgctgctctccttcccggagtcctggtcctcgtcatggacacccgacacaccc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 aaggcggtgctgctctccttcccggagtcctggtcctcgtcatggacacccgacacaccc 4744 Query: 182 tgctgcgactggttcgccatcgcctgcgaccgctccagcgggcgcatcgtgggcttctcc 241 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 4745 tgctgcgactggttcgccgtcgcctgcgaccgctccaccgggcgcatcgtgggcttctcc 4804 Query: 242 gtcttccaggaccccgacttcaccggcacaatccccagcgccatcgccggcctcacccac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4805 gtcttccaggaccccgacttcaccggcacaatccccagcgccatcgccggcctcacccac 4864 Query: 302 ctgcaggacctcttcctgcaccacctcccggggctgtctggccccataccgccggagata 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4865 ctgcaggacctcttcctgcaccacctcccggggctgtctggccccataccgccggagata 4924 Query: 362 ggcaagctctccaacctctccaggctcgaaatctcatggacgggggtgtccggccccgtg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4925 ggcaagctctccaacctctccaggctcgaaatctcatggacgggggtgtccggccccgtg 4984 Query: 422 ccgtcctccctgggcgcgctcaagaagctcgcccagctcaacctctccttcaactcgctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4985 ccgtcctccctgggcgcgctcaagaagctcgcccagctcaacctctccttcaactcgctc 5044 Query: 482 agcggcgccatcccggtgtcgctggggacaatccccggcatcaccctcagccgcaaccgc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5045 agcggcgccatcccggtgtcgctggggacaatccccggcatcaccctcagccgcaaccgc 5104 Query: 542 ctcaccggcgccatccccaacatgttcctcggcgagtccgcgggccgggacgtctacctc 601 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5105 ctcaccggggccatccccaacatgttcctcggcgagtccgcgggccgggacgtctacctc 5164 Query: 602 gacgtgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttc 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5165 gacgtgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttc 5224 Query: 662 acgcacctcgacctctcgcgcaacgccctgaccggcgacgcgtcgggcctcttcggccgt 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5225 acgcacctcgacctctcgcgcaacgccctgaccggcgacgcgtcgggcctcttcggccgt 5284 Query: 722 gggaaggagctgcagtacatcgacctgtcccgcaacgccttcgacttcgacctgtcaggc 781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5285 gggaaggagctgcagtacatcgacctgtcccgcaacgccttcgacttcgacctgtcaggc 5344 Query: 782 gtggtggtgctcccggagaagctcttccacctggacctgagccacaatgccatccatggc 841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5345 gtggtggtgctcccggagaagctcttccacctggacctgagccacaatgccatccatggc 5404 Query: 842 agcatcccggcgcaggtcgcggacgtggcgaacctgctggcgttcaacgtcagctacaac 901 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5405 agcatcccggcgcaggtcgcggacgtggccaacctgctggcgttcaacgtcagctacaac 5464 Query: 902 aggctctgcggcgccgtgcccaccggcgggaacatggcgaggttcgatctctacaacttc 961 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5465 aggctctgcggcgccgtgcccaccggcgggaacatggcgaggttcgatctctacaacttc 5524 Query: 962 cagcacaacaagtgcctctgcggtgctcccc--tccctccctgcaagaactagatggatt 1019 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5525 cagcacaacaagtgcctctgcggtgctccccctcccctccctgcaagaactagatggatt 5584 Query: 1020 atcttgtgggttttgacagaataacgagacgctggtattcatgtgtcgaccaattcggct 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5585 atcttgtgggttttgacagaataacgagacgctggtattcatgtgtcgaccaattcggct 5644 Query: 1080 gtattcatgtctctggattaagagttgtgctgaaataaagtaaaaatgattag 1132 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5645 gtattcatgtctctggattaagagttgtgctgaaataaagtaaaaatgattag 5697
>emb|AJ234510.1|HVU234510 Hordeum vulgare genomic DNA fragment; clone MWG0570.uni Length = 442 Score = 180 bits (91), Expect = 7e-42 Identities = 121/131 (92%) Strand = Plus / Plus Query: 884 ttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgggaacatggcgagg 943 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 8 ttcaacgtcagctacaacaggctatgtggccccgtgcccaccggcgggaacatggcgagg 67 Query: 944 ttcgatctctacaacttccagcacaacaagtgcctctgcggtgctcccctccctccctgc 1003 || || || |||||||| ||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 68 tttgacctttacaactttcagcacaacaagtgcctctgcggtgctcccctctctccatgc 127 Query: 1004 aagaactagat 1014 ||||| ||||| Sbjct: 128 aagaagtagat 138 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1092 ctggattaagagttgtgctgaaataaagt 1120 ||||||||||| ||||||||||||||||| Sbjct: 233 ctggattaagacttgtgctgaaataaagt 261
>emb|AM180655.1| Oryza sativa pgip4 gene for polygalacturonase inhibiting protein 4 Length = 1050 Score = 145 bits (73), Expect = 4e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||||| ||| |||||||||||||||| ||| | || Sbjct: 852 cctggacgtgagccacaacgccatccgcggcggcatcccggcgcaggtggcgaatctgag 911 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 ||||||| | | |||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 912 caacctgcagctgctcaacgtcagctacaacaggatgtgcggcgaggtgcccaccggcgg 971 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcggtgc 987 ||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 972 caacatggcgaggttcgacgcctactgcttccagcacaacaagtgcctctgcggtgc 1028 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 462 acctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||||| |||||||||||||| Sbjct: 497 acctctccttcaactcgctcaccggcgccatcccgg 532 Score = 42.1 bits (21), Expect = 4.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| ||||| |||||||| | ||||| |||||| |||||| || Sbjct: 647 tgtcacacaacaacctgtccgggaggatcccggcggcgttcggcgccgtcaacttcgtgc 706 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||| ||| || ||||||||||||||| Sbjct: 707 agatcgacctgtcgcgaaaccagctcaccggcgacgcgtcg 747
>ref|NM_001060939.1| Oryza sativa (japonica cultivar-group) Os05g0104700 (Os05g0104700) mRNA, complete cds Length = 1640 Score = 145 bits (73), Expect = 4e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||||| ||| |||||||||||||||| ||| | || Sbjct: 1287 cctggacgtgagccacaacgccatccgcggcggcatcccggcgcaggtggcgaatctgag 1346 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 ||||||| | | |||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 1347 caacctgcagctgctcaacgtcagctacaacaggatgtgcggcgaggtgcccaccggcgg 1406 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcggtgc 987 ||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 1407 caacatggcgaggttcgacgcctactgcttccagcacaacaagtgcctctgcggtgc 1463 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 462 acctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||||| |||||||||||||| Sbjct: 932 acctctccttcaactcgctcaccggcgccatcccgg 967 Score = 42.1 bits (21), Expect = 4.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| ||||| |||||||| | ||||| |||||| |||||| || Sbjct: 1082 tgtcacacaacaacctgtccgggaggatcccggcggcgttcggcgccgtcaacttcgtgc 1141 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||| ||| || ||||||||||||||| Sbjct: 1142 agatcgacctgtcgcgaaaccagctcaccggcgacgcgtcg 1182
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 145 bits (73), Expect = 4e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||||| ||| |||||||||||||||| ||| | || Sbjct: 2240 cctggacgtgagccacaacgccatccgcggcggcatcccggcgcaggtggcgaatctgag 2299 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 ||||||| | | |||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 2300 caacctgcagctgctcaacgtcagctacaacaggatgtgcggcgaggtgcccaccggcgg 2359 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcggtgc 987 ||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2360 caacatggcgaggttcgacgcctactgcttccagcacaacaagtgcctctgcggtgc 2416 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 462 acctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||||| |||||||||||||| Sbjct: 1885 acctctccttcaactcgctcaccggcgccatcccgg 1920 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 631 catcccggccgagttcgccgccgtgaactt 660 ||||||||| |||||||||||||| ||||| Sbjct: 2992 catcccggcggagttcgccgccgtcaactt 3021 Score = 42.1 bits (21), Expect = 4.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| ||||| |||||||| | ||||| |||||| |||||| || Sbjct: 2035 tgtcacacaacaacctgtccgggaggatcccggcggcgttcggcgccgtcaacttcgtgc 2094 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||| ||| || ||||||||||||||| Sbjct: 2095 agatcgacctgtcgcgaaaccagctcaccggcgacgcgtcg 2135
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 145 bits (73), Expect = 4e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||||| ||| |||||||||||||||| ||| | || Sbjct: 226720 cctggacgtgagccacaacgccatccgcggcggcatcccggcgcaggtggcgaatctgag 226779 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 ||||||| | | |||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 226780 caacctgcagctgctcaacgtcagctacaacaggatgtgcggcgaggtgcccaccggcgg 226839 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcggtgc 987 ||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 226840 caacatggcgaggttcgacgcctactgcttccagcacaacaagtgcctctgcggtgc 226896 Score = 131 bits (66), Expect = 6e-27 Identities = 147/174 (84%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||| | |||||||||||||||||| | || || || | Sbjct: 217873 cctggacgtgagccacaactccatctacggcagcatcccggcgcagatggccaacatgac 217932 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 | || ||| | | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 217933 ggacatgcagctgctcaacgtcagctacaacaggctctgcggcgtggtgcccaccggcgg 217992 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcgg 984 |||||| | || |||||| |||| ||||||||||||||||||||||||||| Sbjct: 217993 caacatgcccagcttcgatgcctactgcttccagcacaacaagtgcctctgcgg 218046 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 228 tcgtgggcttctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcg 287 |||| ||| ||||||||||||||||| || || |||||||||| |||||| |||| ||| Sbjct: 199710 tcgtcggcctctccgtcttccaggacgccaacctcaccggcaccatccccgacgccgtcg 199769 Query: 288 ccggcctcacccacct 303 |||||||||||||||| Sbjct: 199770 ccggcctcacccacct 199785 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 462 acctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||||| |||||||||||||| Sbjct: 226365 acctctccttcaactcgctcaccggcgccatcccgg 226400 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 237 tctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcgccggcctca 296 ||||||||||||||||| || || |||||||| | |||||| |||||||||| ||||| Sbjct: 195907 tctccgtcttccaggacaccaacctcaccggcgccatccccgacgccatcgccaacctca 195966 Query: 297 cccacct 303 ||||||| Sbjct: 195967 cccacct 195973 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 410 tccggccccgtgccgtcctccctgggcgcgctcaagaagctcgcccagctcaacctctcc 469 ||||||||||| || |||| ||| |||| |||||||| ||| ||| ||| | |||||| Sbjct: 199892 tccggccccgtcccctccttcctcggcgggctcaagagcctcaccctcctcgatctctcc 199951 Query: 470 ttcaactcgctcagcggcgccatcccg 496 |||||||| |||| ||||||||||||| Sbjct: 199952 ttcaactccctcaccggcgccatcccg 199978 Score = 60.0 bits (30), Expect = 2e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 813 tggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggcga 872 ||||| |||||||||| ||||||| || | |||||||||||||| || || | | | Sbjct: 196495 tggacgtgagccacaacgccatccgcggggggatcccggcgcaggtggccaacctcacca 196554 Query: 873 acctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgccc 922 |||||| | ||||||||||||||||||||| | | |||||||| |||||| Sbjct: 196555 acctgcagacgttcaacgtcagctacaacaagatgtgcggcgcggtgccc 196604 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 464 ctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||| |||||||||||||| Sbjct: 217520 ctctccttcaactcgctcaccggcgccatcccgg 217553 Score = 58.0 bits (29), Expect = 7e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| || ||| |||||||| ||||||| |||||| |||||| || Sbjct: 217668 tgtcccacaacaacctgacggggaggatcccggcggagttcggcgccgtcaacttcgtgc 217727 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||||||| || ||||||||||||||| Sbjct: 217728 agatcgacctgtcgcgcaaccagctcaccggcgacgcgtcg 217768 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 520 catcaccctcagccgcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| ||||| ||||||| Sbjct: 196199 catcaacctcagccgcaaccgcctctccggccccatccc 196237 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 671 gacctctcgcgcaacgccctgaccggcgacgcgtcgg 707 ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 196365 gacctgtcgcggaacgcgctgaccggcgacgcgtcgg 196401 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 608 tcgcacaacaacctcaccggggccatccc 636 |||||||||||||||||||| |||||||| Sbjct: 29087443 tcgcacaacaacctcaccggcgccatccc 29087471 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 526 cctcagccgcaaccgcctcaccgg 549 |||||||||||||||||||||||| Sbjct: 217591 cctcagccgcaaccgcctcaccgg 217614 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 tcagccgcaaccgcctcaccggc 550 ||||||||||||||||||||||| Sbjct: 200019 tcagccgcaaccgcctcaccggc 200041 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 614 aacaacctcaccggggccatcccggccgagt 644 |||||||||||||| | |||||||||||||| Sbjct: 200114 aacaacctcaccggcggcatcccggccgagt 200144 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 884 ttcaacgtcagctacaacaggctctgcggcg 914 |||||||||||||||||| | |||||||||| Sbjct: 200309 ttcaacgtcagctacaaccgcctctgcggcg 200339 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 965 cacaacaagtgcctctgcggtgctcccctc 994 |||||||| ||||||||||| ||||||||| Sbjct: 196638 cacaacaaatgcctctgcggcgctcccctc 196667 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 631 catcccggccgagttcgccgccgtgaactt 660 ||||||||| |||||||||||||| ||||| Sbjct: 227472 catcccggcggagttcgccgccgtcaactt 227501 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 905 ctctgcggcgccgtgcccaccg 926 |||||||||||||||||||||| Sbjct: 8440003 ctctgcggcgccgtgcccaccg 8439982 Score = 42.1 bits (21), Expect = 4.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| ||||| |||||||| | ||||| |||||| |||||| || Sbjct: 226515 tgtcacacaacaacctgtccgggaggatcccggcggcgttcggcgccgtcaacttcgtgc 226574 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||| ||| || ||||||||||||||| Sbjct: 226575 agatcgacctgtcgcgaaaccagctcaccggcgacgcgtcg 226615 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||||||||| |||||| Sbjct: 4155332 gcaaccgcctcaccggcggcatccc 4155356
>dbj|AK108676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A03, full insert sequence Length = 1640 Score = 145 bits (73), Expect = 4e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||||| ||| |||||||||||||||| ||| | || Sbjct: 1287 cctggacgtgagccacaacgccatccgcggcggcatcccggcgcaggtggcgaatctgag 1346 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 ||||||| | | |||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 1347 caacctgcagctgctcaacgtcagctacaacaggatgtgcggcgaggtgcccaccggcgg 1406 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcggtgc 987 ||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 1407 caacatggcgaggttcgacgcctactgcttccagcacaacaagtgcctctgcggtgc 1463 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 462 acctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||||| |||||||||||||| Sbjct: 932 acctctccttcaactcgctcaccggcgccatcccgg 967 Score = 42.1 bits (21), Expect = 4.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| ||||| |||||||| | ||||| |||||| |||||| || Sbjct: 1082 tgtcacacaacaacctgtccgggaggatcccggcggcgttcggcgccgtcaacttcgtgc 1141 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||| ||| || ||||||||||||||| Sbjct: 1142 agatcgacctgtcgcgaaaccagctcaccggcgacgcgtcg 1182
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 145 bits (73), Expect = 4e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||||| ||| |||||||||||||||| ||| | || Sbjct: 108904 cctggacgtgagccacaacgccatccgcggcggcatcccggcgcaggtggcgaatctgag 108963 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 ||||||| | | |||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 108964 caacctgcagctgctcaacgtcagctacaacaggatgtgcggcgaggtgcccaccggcgg 109023 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcggtgc 987 ||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 109024 caacatggcgaggttcgacgcctactgcttccagcacaacaagtgcctctgcggtgc 109080 Score = 131 bits (66), Expect = 6e-27 Identities = 147/174 (84%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||| | |||||||||||||||||| | || || || | Sbjct: 100057 cctggacgtgagccacaactccatctacggcagcatcccggcgcagatggccaacatgac 100116 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 | || ||| | | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100117 ggacatgcagctgctcaacgtcagctacaacaggctctgcggcgtggtgcccaccggcgg 100176 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcgg 984 |||||| | || |||||| |||| ||||||||||||||||||||||||||| Sbjct: 100177 caacatgcccagcttcgatgcctactgcttccagcacaacaagtgcctctgcgg 100230 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 228 tcgtgggcttctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcg 287 |||| ||| ||||||||||||||||| || || |||||||||| |||||| |||| ||| Sbjct: 81894 tcgtcggcctctccgtcttccaggacgccaacctcaccggcaccatccccgacgccgtcg 81953 Query: 288 ccggcctcacccacct 303 |||||||||||||||| Sbjct: 81954 ccggcctcacccacct 81969 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 462 acctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||||| |||||||||||||| Sbjct: 108549 acctctccttcaactcgctcaccggcgccatcccgg 108584 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 237 tctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcgccggcctca 296 ||||||||||||||||| || || |||||||| | |||||| |||||||||| ||||| Sbjct: 78091 tctccgtcttccaggacaccaacctcaccggcgccatccccgacgccatcgccaacctca 78150 Query: 297 cccacct 303 ||||||| Sbjct: 78151 cccacct 78157 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 410 tccggccccgtgccgtcctccctgggcgcgctcaagaagctcgcccagctcaacctctcc 469 ||||||||||| || |||| ||| |||| |||||||| ||| ||| ||| | |||||| Sbjct: 82076 tccggccccgtcccctccttcctcggcgggctcaagagcctcaccctcctcgatctctcc 82135 Query: 470 ttcaactcgctcagcggcgccatcccg 496 |||||||| |||| ||||||||||||| Sbjct: 82136 ttcaactccctcaccggcgccatcccg 82162 Score = 60.0 bits (30), Expect = 2e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 813 tggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggcga 872 ||||| |||||||||| ||||||| || | |||||||||||||| || || | | | Sbjct: 78679 tggacgtgagccacaacgccatccgcggggggatcccggcgcaggtggccaacctcacca 78738 Query: 873 acctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgccc 922 |||||| | ||||||||||||||||||||| | | |||||||| |||||| Sbjct: 78739 acctgcagacgttcaacgtcagctacaacaagatgtgcggcgcggtgccc 78788 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 464 ctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||| |||||||||||||| Sbjct: 99704 ctctccttcaactcgctcaccggcgccatcccgg 99737 Score = 58.0 bits (29), Expect = 7e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| || ||| |||||||| ||||||| |||||| |||||| || Sbjct: 99852 tgtcccacaacaacctgacggggaggatcccggcggagttcggcgccgtcaacttcgtgc 99911 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||||||| || ||||||||||||||| Sbjct: 99912 agatcgacctgtcgcgcaaccagctcaccggcgacgcgtcg 99952 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 520 catcaccctcagccgcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| ||||| ||||||| Sbjct: 78383 catcaacctcagccgcaaccgcctctccggccccatccc 78421 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 671 gacctctcgcgcaacgccctgaccggcgacgcgtcgg 707 ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 78549 gacctgtcgcggaacgcgctgaccggcgacgcgtcgg 78585 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 526 cctcagccgcaaccgcctcaccgg 549 |||||||||||||||||||||||| Sbjct: 99775 cctcagccgcaaccgcctcaccgg 99798 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 tcagccgcaaccgcctcaccggc 550 ||||||||||||||||||||||| Sbjct: 82203 tcagccgcaaccgcctcaccggc 82225 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 614 aacaacctcaccggggccatcccggccgagt 644 |||||||||||||| | |||||||||||||| Sbjct: 82298 aacaacctcaccggcggcatcccggccgagt 82328 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 884 ttcaacgtcagctacaacaggctctgcggcg 914 |||||||||||||||||| | |||||||||| Sbjct: 82493 ttcaacgtcagctacaaccgcctctgcggcg 82523 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 965 cacaacaagtgcctctgcggtgctcccctc 994 |||||||| ||||||||||| ||||||||| Sbjct: 78822 cacaacaaatgcctctgcggcgctcccctc 78851 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 631 catcccggccgagttcgccgccgtgaactt 660 ||||||||| |||||||||||||| ||||| Sbjct: 109656 catcccggcggagttcgccgccgtcaactt 109685 Score = 42.1 bits (21), Expect = 4.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| ||||| |||||||| | ||||| |||||| |||||| || Sbjct: 108699 tgtcacacaacaacctgtccgggaggatcccggcggcgttcggcgccgtcaacttcgtgc 108758 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||| ||| || ||||||||||||||| Sbjct: 108759 agatcgacctgtcgcgaaaccagctcaccggcgacgcgtcg 108799
>emb|AM180654.1| Oryza sativa pgip3 gene for polygalacturonase inhibiting protein 3 Length = 1020 Score = 131 bits (66), Expect = 6e-27 Identities = 147/174 (84%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||| | |||||||||||||||||| | || || || | Sbjct: 819 cctggacgtgagccacaactccatctacggcagcatcccggcgcagatggccaacatgac 878 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 | || ||| | | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 879 ggacatgcagctgctcaacgtcagctacaacaggctctgcggcgtggtgcccaccggcgg 938 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcgg 984 |||||| | || |||||| |||| ||||||||||||||||||||||||||| Sbjct: 939 caacatgcccagcttcgatgcctactgcttccagcacaacaagtgcctctgcgg 992 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 464 ctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||| |||||||||||||| Sbjct: 466 ctctccttcaactcgctcaccggcgccatcccgg 499 Score = 58.0 bits (29), Expect = 7e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| || ||| |||||||| ||||||| |||||| |||||| || Sbjct: 614 tgtcccacaacaacctgacggggaggatcccggcggagttcggcgccgtcaacttcgtgc 673 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||||||| || ||||||||||||||| Sbjct: 674 agatcgacctgtcgcgcaaccagctcaccggcgacgcgtcg 714 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 526 cctcagccgcaaccgcctcaccgg 549 |||||||||||||||||||||||| Sbjct: 537 cctcagccgcaaccgcctcaccgg 560
>ref|NM_001060938.1| Oryza sativa (japonica cultivar-group) Os05g0104600 (Os05g0104600) mRNA, complete cds Length = 1020 Score = 131 bits (66), Expect = 6e-27 Identities = 147/174 (84%) Strand = Plus / Plus Query: 811 cctggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggc 870 ||||||| |||||||||| ||||| | |||||||||||||||||| | || || || | Sbjct: 819 cctggacgtgagccacaactccatctacggcagcatcccggcgcagatggccaacatgac 878 Query: 871 gaacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgcccaccggcgg 930 | || ||| | | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 879 ggacatgcagctgctcaacgtcagctacaacaggctctgcggcgtggtgcccaccggcgg 938 Query: 931 gaacatggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcgg 984 |||||| | || |||||| |||| ||||||||||||||||||||||||||| Sbjct: 939 caacatgcccagcttcgatgcctactgcttccagcacaacaagtgcctctgcgg 992 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 464 ctctccttcaactcgctcagcggcgccatcccgg 497 ||||||||||||||||||| |||||||||||||| Sbjct: 466 ctctccttcaactcgctcaccggcgccatcccgg 499 Score = 58.0 bits (29), Expect = 7e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 |||| ||||||||||| || ||| |||||||| ||||||| |||||| |||||| || Sbjct: 614 tgtcccacaacaacctgacggggaggatcccggcggagttcggcgccgtcaacttcgtgc 673 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| ||||||||| || ||||||||||||||| Sbjct: 674 agatcgacctgtcgcgcaaccagctcaccggcgacgcgtcg 714 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 526 cctcagccgcaaccgcctcaccgg 549 |||||||||||||||||||||||| Sbjct: 537 cctcagccgcaaccgcctcaccgg 560
>emb|AM180656.1| Triticum aestivum pgip1 gene for polygalacturonase inhibiting protein 1 Length = 1014 Score = 97.6 bits (49), Expect = 8e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 936 tggcgaggttcgatctctacaacttccagcacaacaagtgcctctgcggtgctcccctcc 995 |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 935 tggcgaggttggatgtctacaacttccagcacaacaagtgcctctgcggtgcgcccctcc 994 Query: 996 c 996 | Sbjct: 995 c 995 Score = 42.1 bits (21), Expect = 4.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 669 tcgacctctcgcgcaacgccctgaccggcgacgcgtc 705 |||||||||| | |||||| || |||||||||||||| Sbjct: 677 tcgacctctcccacaacgctctcaccggcgacgcgtc 713
>emb|AM180652.1| Oryza sativa pgip1 gene for polygalacturonase inhibiting protein 1 Length = 930 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 228 tcgtgggcttctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcg 287 |||| ||| ||||||||||||||||| || || |||||||||| |||||| |||| ||| Sbjct: 209 tcgtcggcctctccgtcttccaggacgccaacctcaccggcaccatccccgacgccgtcg 268 Query: 288 ccggcctcacccacct 303 |||||||||||||||| Sbjct: 269 ccggcctcacccacct 284 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 410 tccggccccgtgccgtcctccctgggcgcgctcaagaagctcgcccagctcaacctctcc 469 ||||||||||| || |||| ||| |||| |||||||| ||| ||| ||| | |||||| Sbjct: 391 tccggccccgtcccctccttcctcggcgggctcaagagcctcaccctcctcgatctctcc 450 Query: 470 ttcaactcgctcagcggcgccatcccg 496 |||||||| |||| ||||||||||||| Sbjct: 451 ttcaactccctcaccggcgccatcccg 477 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 tcagccgcaaccgcctcaccggc 550 ||||||||||||||||||||||| Sbjct: 518 tcagccgcaaccgcctcaccggc 540 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 614 aacaacctcaccggggccatcccggccgagt 644 |||||||||||||| | |||||||||||||| Sbjct: 613 aacaacctcaccggcggcatcccggccgagt 643 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 884 ttcaacgtcagctacaacaggctctgcggcg 914 |||||||||||||||||| | |||||||||| Sbjct: 808 ttcaacgtcagctacaaccgcctctgcggcg 838
>ref|NM_001060937.1| Oryza sativa (japonica cultivar-group) Os05g0104300 (Os05g0104300) mRNA, complete cds Length = 930 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 228 tcgtgggcttctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcg 287 |||| ||| ||||||||||||||||| || || |||||||||| |||||| |||| ||| Sbjct: 209 tcgtcggcctctccgtcttccaggacgccaacctcaccggcaccatccccgacgccgtcg 268 Query: 288 ccggcctcacccacct 303 |||||||||||||||| Sbjct: 269 ccggcctcacccacct 284 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 410 tccggccccgtgccgtcctccctgggcgcgctcaagaagctcgcccagctcaacctctcc 469 ||||||||||| || |||| ||| |||| |||||||| ||| ||| ||| | |||||| Sbjct: 391 tccggccccgtcccctccttcctcggcgggctcaagagcctcaccctcctcgatctctcc 450 Query: 470 ttcaactcgctcagcggcgccatcccg 496 |||||||| |||| ||||||||||||| Sbjct: 451 ttcaactccctcaccggcgccatcccg 477 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 tcagccgcaaccgcctcaccggc 550 ||||||||||||||||||||||| Sbjct: 518 tcagccgcaaccgcctcaccggc 540 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 614 aacaacctcaccggggccatcccggccgagt 644 |||||||||||||| | |||||||||||||| Sbjct: 613 aacaacctcaccggcggcatcccggccgagt 643 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 884 ttcaacgtcagctacaacaggctctgcggcg 914 |||||||||||||||||| | |||||||||| Sbjct: 808 ttcaacgtcagctacaaccgcctctgcggcg 838
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 65.9 bits (33), Expect = 3e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 ||||||||||||||||| || || ||||||||| ||||||||||| || |||||| ||| Sbjct: 17702694 tgtcgcacaacaacctctccaggagcatcccggcggagttcgccgctgtcaacttcgcgc 17702635 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| | ||| ||| | |||||||||||||||| Sbjct: 17702634 gcatcgacctgttgcggaaccagccgaccggcgacgcgtcg 17702594 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 14054700 ctgctgctgctcctcttcctc 14054720 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 613 caacaacctcaccggggccatcccggccg 641 |||||| |||||||| ||||||||||||| Sbjct: 27159730 caacaagctcaccggcgccatcccggccg 27159758 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||| |||||||||||||||||| Sbjct: 27159945 gcaacctcctcaccggcgccatccc 27159969
>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113494 Score = 65.9 bits (33), Expect = 3e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 606 tgtcgcacaacaacctcaccggggccatcccggccgagttcgccgccgtgaacttcacgc 665 ||||||||||||||||| || || ||||||||| ||||||||||| || |||||| ||| Sbjct: 78659 tgtcgcacaacaacctctccaggagcatcccggcggagttcgccgctgtcaacttcgcgc 78718 Query: 666 acctcgacctctcgcgcaacgccctgaccggcgacgcgtcg 706 | ||||||| | ||| ||| | |||||||||||||||| Sbjct: 78719 gcatcgacctgttgcggaaccagccgaccggcgacgcgtcg 78759
>emb|AM180653.1| Oryza sativa pgip2 gene for polygalacturonase inhibiting protein 2 Length = 1029 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 237 tctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcgccggcctca 296 ||||||||||||||||| || || |||||||| | |||||| |||||||||| ||||| Sbjct: 245 tctccgtcttccaggacaccaacctcaccggcgccatccccgacgccatcgccaacctca 304 Query: 297 cccacct 303 ||||||| Sbjct: 305 cccacct 311 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 520 catcaccctcagccgcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| ||||| ||||||| Sbjct: 537 catcaacctcagccgcaaccgcctctccggccccatccc 575 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 671 gacctctcgcgcaacgccctgaccggcgacgcgtcgg 707 ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 703 gacctgtcgcggaacgcgctgaccggcgacgcgtcgg 739 Score = 46.1 bits (23), Expect = 0.28 Identities = 44/51 (86%) Strand = Plus / Plus Query: 872 aacctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgccc 922 ||||||| | ||||||||||||||||| ||| | | |||||||| |||||| Sbjct: 892 aacctgcagacgttcaacgtcagctacgacaagatgtgcggcgcggtgccc 942 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 965 cacaacaagtgcctctgcggtgctcccctc 994 |||||||| ||||||||||| ||||||||| Sbjct: 976 cacaacaaatgcctctgcggcgctcccctc 1005
>ref|NM_001060936.1| Oryza sativa (japonica cultivar-group) Os05g0104200 (Os05g0104200) mRNA, complete cds Length = 1029 Score = 61.9 bits (31), Expect = 5e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 237 tctccgtcttccaggaccccgacttcaccggcacaatccccagcgccatcgccggcctca 296 ||||||||||||||||| || || |||||||| | |||||| |||||||||| ||||| Sbjct: 245 tctccgtcttccaggacaccaacctcaccggcgccatccccgacgccatcgccaacctca 304 Query: 297 cccacct 303 ||||||| Sbjct: 305 cccacct 311 Score = 60.0 bits (30), Expect = 2e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 813 tggacctgagccacaatgccatccatggcagcatcccggcgcaggtcgcggacgtggcga 872 ||||| |||||||||| ||||||| || | |||||||||||||| || || | | | Sbjct: 833 tggacgtgagccacaacgccatccgcggggggatcccggcgcaggtggccaacctcacca 892 Query: 873 acctgctggcgttcaacgtcagctacaacaggctctgcggcgccgtgccc 922 |||||| | ||||||||||||||||||||| | | |||||||| |||||| Sbjct: 893 acctgcagacgttcaacgtcagctacaacaagatgtgcggcgcggtgccc 942 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 520 catcaccctcagccgcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| ||||| ||||||| Sbjct: 537 catcaacctcagccgcaaccgcctctccggccccatccc 575 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Plus Query: 671 gacctctcgcgcaacgccctgaccggcgacgcgtcgg 707 ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 703 gacctgtcgcggaacgcgctgaccggcgacgcgtcgg 739 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 965 cacaacaagtgcctctgcggtgctcccctc 994 |||||||| ||||||||||| ||||||||| Sbjct: 976 cacaacaaatgcctctgcggcgctcccctc 1005
>ref|NM_009781.2| Mus musculus calcium channel, voltage-dependent, L type, alpha 1C subunit (Cacna1c), mRNA dbj|AB259049.1| Mus musculus CaV1.2-a mRNA for voltage-dependent calcium channel splice variant 1.2-a, complete cds Length = 6510 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 2048 ccctgctgctgctcctcttcctcttc 2073
>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence Length = 293695 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 121855 ccctgctgctgctcctcttcctcttc 121880
>gb|AC036121.11| Mus musculus chromosome 6, clone RP23-158O9, complete sequence Length = 215685 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 13358 ccctgctgctgctcctcttcctcttc 13383
>emb|AJ311617.1|MAU311617 Mesocricetus auratus mRNA for neuroendocrine voltage-gated calcium channel alpha1 subunit (caV1.3 (alpha1D) gene) Length = 4809 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 1928 ccctgctgctgctcctcttcctcttc 1953
>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence Length = 186950 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 178159 ccctgctgctgctcctcttcctcttc 178184
>gb|L01776.1|MUSDHPCC Mus musculus neuronal dihydropyridine-sensitive L-type calcium channel alpha-1 subunit mRNA, complete cds Length = 9014 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 3124 ccctgctgctgctcctcttcctcttc 3149
>gb|AY728090.1| Mus musculus neuronal voltage-gated calcium channel alpha 1C subunit (Cacna1c) mRNA, complete cds Length = 6614 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 2013 ccctgctgctgctcctcttcctcttc 2038
>gb|U17869.1|U17869 Mus musculus murine erythroleukemia cardiac calcium channel (MELC-CC) mRNA, complete cds Length = 7582 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||||| Sbjct: 1635 ccctgctgctgctcctcttcctcttc 1660
>gb|DQ329519.1| Felis catus clone b274 chromosome Y TSPY mRNA, complete cds Length = 1171 Score = 50.1 bits (25), Expect = 0.018 Identities = 25/25 (100%) Strand = Plus / Minus Query: 22 cgccctgctgctgctcctcttcctc 46 ||||||||||||||||||||||||| Sbjct: 287 cgccctgctgctgctcctcttcctc 263
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 50.1 bits (25), Expect = 0.018 Identities = 25/25 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||||||||||||| Sbjct: 154272 ctgctgctgctcctcttcctcttct 154296
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 608 tcgcacaacaacctcaccggggccatccc 636 |||||||||||||||||||| |||||||| Sbjct: 97498 tcgcacaacaacctcaccggcgccatccc 97526
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 50.1 bits (25), Expect = 0.018 Identities = 28/29 (96%) Strand = Plus / Plus Query: 608 tcgcacaacaacctcaccggggccatccc 636 |||||||||||||||||||| |||||||| Sbjct: 13667 tcgcacaacaacctcaccggcgccatccc 13695
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx, Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X, steroid 21-hydroxylase, partial and complete cds Length = 67977 Score = 50.1 bits (25), Expect = 0.018 Identities = 25/25 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||||||||||||| Sbjct: 23360 ctgctgctgctcctcttcctcttct 23384
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 50.1 bits (25), Expect = 0.018 Identities = 25/25 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||||||||||||| Sbjct: 154293 ctgctgctgctcctcttcctcttct 154317
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 50.1 bits (25), Expect = 0.018 Identities = 25/25 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||||||||||||| Sbjct: 15882 ctgctgctgctcctcttcctcttct 15906
>ref|NM_001064499.1| Oryza sativa (japonica cultivar-group) Os06g0589800 (Os06g0589800) mRNA, complete cds Length = 3684 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 535 caaccgcctcaccggcgccatccc 558 |||||||||||||||||||||||| Sbjct: 695 caaccgcctcaccggcgccatccc 718
>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence Length = 209838 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 197879 ctgctgctgctcctcttcctcttc 197902
>gb|AC140441.3| Mus musculus BAC clone RP23-82A21 from chromosome 5, complete sequence Length = 177052 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 159343 ctgctgctgctcctcttcctcttc 159366
>gb|AC115303.6| Mus musculus BAC clone RP24-108I6 from chromosome 1, complete sequence Length = 192812 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 22772 ctgctgctgctcctcttcctcttc 22795
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Minus Query: 535 caaccgcctcaccggcgccatccc 558 |||||||||||||||||||||||| Sbjct: 22764571 caaccgcctcaccggcgccatccc 22764548 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 25338377 cctgctgctgctcctcttcctc 25338356 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 526 cctcagccgcaaccgcctcaccggcgccatccc 558 ||||||| ||||||||||| |||||| |||||| Sbjct: 4353138 cctcagcggcaaccgcctctccggcggcatccc 4353106 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 478 gctcagcggcgccatcccggtgtcg 502 ||||||||||| ||||||||||||| Sbjct: 6202491 gctcagcggcgacatcccggtgtcg 6202515
>emb|AL645623.13| Mouse DNA sequence from clone RP23-391K14 on chromosome 11 Contains the 5' end of the Zfp403 gene for zinc finger protein 403, the Pigw gene for phosphatidylinositol glycan class W, a novel gene, the Myohd1 gene for myosin head domain containing 1 and a CpG island, complete sequence Length = 106008 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 20996 ctgctgctgctcctcttcctcttc 20973
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633E08 Length = 136471 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Minus Query: 535 caaccgcctcaccggcgccatccc 558 |||||||||||||||||||||||| Sbjct: 51522 caaccgcctcaccggcgccatccc 51499
>dbj|AK101039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000K11, full insert sequence Length = 3685 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 535 caaccgcctcaccggcgccatccc 558 |||||||||||||||||||||||| Sbjct: 696 caaccgcctcaccggcgccatccc 719
>gb|AF198574.1|AF198574 Orconectes longidigitus strain KC214/5 internal transcribed spacer 1, partial sequence Length = 659 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 348 ctgctgctgctcctcttcctcttc 371
>gb|AF198573.1|AF198573 Orconectes longidigitus strain KC214/4 internal transcribed spacer 1, partial sequence Length = 672 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 365 ctgctgctgctcctcttcctcttc 388
>gb|AF198572.1|AF198572 Orconectes longidigitus strain KC214/3 internal transcribed spacer 1, partial sequence Length = 672 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 365 ctgctgctgctcctcttcctcttc 388
>gb|AF198571.1|AF198571 Orconectes longidigitus strain KC214/2 internal transcribed spacer 1, partial sequence Length = 660 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 358 ctgctgctgctcctcttcctcttc 381
>gb|AF198570.1|AF198570 Orconectes longidigitus strain KC214/1 internal transcribed spacer 1, partial sequence Length = 564 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 322 ctgctgctgctcctcttcctcttc 345
>gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, complete sequence Length = 169072 Score = 48.1 bits (24), Expect = 0.070 Identities = 24/24 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttc 49 |||||||||||||||||||||||| Sbjct: 142704 ctgctgctgctcctcttcctcttc 142681
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 840 gcagcatcccggcgcaggtcgcg 862 ||||||||||||||||||||||| Sbjct: 1128099 gcagcatcccggcgcaggtcgcg 1128121
>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1 Contains the MGAT3 gene for mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, the gene for a predicted protein, the ATF4 gene for activating transcription factor 4 (tax-responsive enhancer element B67) and the 5' end of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit. Contains ESTs, STSs, GSSs and five putative CpG islands, complete sequence Length = 112460 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctc 46 ||||||||||||||||||||||| Sbjct: 101249 ccctgctgctgctcctcttcctc 101271
>gb|DQ538522.1| Rattus norvegicus L-type calcium channel alpha-1 subunit (Cacna1c) mRNA, complete cds, alternatively spliced Length = 6613 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2052 ccctgctgctactcctcttcctcttc 2077
>gb|AY974797.1| Rattus norvegicus L-type calcium channel alpha-1 subunit mRNA, complete cds, alternatively spliced Length = 6919 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2358 ccctgctgctactcctcttcctcttc 2383
>ref|XM_416388.2| PREDICTED: Gallus gallus calcium channel, voltage-dependent, L type, alpha 1C subunit (CACNA1C), mRNA Length = 6886 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||| ||||||||||||||||||||| Sbjct: 1985 ccctcctgctgctcctcttcctcttc 2010
>emb|AM180657.1| Triticum aestivum pgip2 gene for polygalacturonase inhibiting protein 2 Length = 1002 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 967 caacaagtgcctctgcggtgctcccctccc 996 |||||||||||| |||||||| |||||||| Sbjct: 954 caacaagtgcctgtgcggtgcgcccctccc 983
>gb|BC125916.1| Danio rerio zgc:153930, mRNA (cDNA clone MGC:153930 IMAGE:7048906), complete cds Length = 3223 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 839 cctgctgctgctcctcttcctc 818
>ref|NM_001068659.1| Oryza sativa (japonica cultivar-group) Os08g0493800 (Os08g0493800) mRNA, partial cds Length = 2916 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 612 acaacaacctcaccggggccatcccg 637 |||||||||||||||| ||||||||| Sbjct: 1358 acaacaacctcaccggcgccatcccg 1383
>ref|NM_001064671.1| Oryza sativa (japonica cultivar-group) Os06g0634300 (Os06g0634300) mRNA, complete cds Length = 1314 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 111 cctgctgctgctcctcttcctc 132
>ref|XR_025594.1| PREDICTED: Pan troglodytes paired box gene 8 (PAX8), mRNA Length = 5547 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 3751 atgccatccatggcagcatccc 3730
>ref|XM_525018.2| PREDICTED: Pan troglodytes calcium channel, voltage-dependent, L type, alpha 1S subunit (CACNA1S), mRNA Length = 5947 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1682 ccctgctgctgctgctcttcctcttc 1707
>ref|NM_000069.2| Homo sapiens calcium channel, voltage-dependent, L type, alpha 1S subunit (CACNA1S), mRNA Length = 6168 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1909 ccctgctgctgctgctcttcctcttc 1934
>gb|DQ767693.1| Sus scrofa CNCNA1S gene, exons 11 through 21 and partial cds Length = 5211 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 719 ccctgctgctgctgctcttcctcttc 744
>ref|XR_013667.1| PREDICTED: Macaca mulatta calcium channel, voltage-dependent, L type, alpha 1S subunit (CACNA1S), mRNA Length = 5592 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1679 ccctgctgctgctgctcttcctcttc 1704
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 46365 cctgctgctgctcctcttcctc 46344
>gb|AC130542.4| Mus musculus chromosome 6 clone RP24-167F4, complete sequence Length = 192106 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 gctgctgctcctcttcctcttc 49 |||||||||||||||||||||| Sbjct: 174841 gctgctgctcctcttcctcttc 174862
>gb|AC163093.5| Mus musculus chromosome 18, clone RP23-144P22, complete sequence Length = 195116 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttct 50 |||||||||||||||| ||||||||| Sbjct: 89971 cctgctgctgctcctcctcctcttct 89946
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 ctgctcctcttcctcttctctg 53 |||||||||||||||||||||| Sbjct: 101022 ctgctcctcttcctcttctctg 101001
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 905 ctctgcggcgccgtgcccaccg 926 |||||||||||||||||||||| Sbjct: 18273 ctctgcggcgccgtgcccaccg 18252
>gb|AC105164.12| Mus musculus chromosome 6, clone RP24-296I7, complete sequence Length = 178877 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 gctgctgctcctcttcctcttc 49 |||||||||||||||||||||| Sbjct: 100180 gctgctgctcctcttcctcttc 100201
>ref|NM_027423.1| Mus musculus polymerase (RNA) III (DNA directed) polypeptide B (Polr3b), mRNA gb|BC068143.1| Mus musculus polymerase (RNA) III (DNA directed) polypeptide B, mRNA (cDNA clone MGC:93030 IMAGE:30362434), complete cds Length = 4858 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttctc 51 ||||||||||||||||||||| |||| Sbjct: 3614 ctgctgctgctcctcttcctcctctc 3589
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 533 cgcaaccgcctcaccggcgcca 554 |||||||||||||||||||||| Sbjct: 95299 cgcaaccgcctcaccggcgcca 95278
>gb|AC121892.3| Mus musculus BAC clone RP24-155I11 from chromosome 1, complete sequence Length = 152888 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 141465 cctgctgctgctcctcttcctc 141444
>ref|XM_547365.2| PREDICTED: Canis familiaris similar to Voltage-dependent L-type calcium channel alpha-1S subunit (Voltage-gated calcium channel alpha subunit Cav1.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 3, skeletal muscle), transcript variant 1 (LOC490244), mRNA Length = 5809 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1682 ccctgctgctgctgctcttcctcttc 1707
>ref|XM_843592.1| PREDICTED: Canis familiaris similar to Voltage-dependent L-type calcium channel alpha-1S subunit (Voltage-gated calcium channel alpha subunit Cav1.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 3, skeletal muscle), transcript variant 2 (LOC490244), mRNA Length = 5866 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1682 ccctgctgctgctgctcttcctcttc 1707
>ref|XM_851647.1| PREDICTED: Canis familiaris similar to Voltage-dependent L-type calcium channel alpha-1S subunit (Voltage-gated calcium channel alpha subunit Cav1.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 3, skeletal muscle), transcript variant 4 (LOC490244), mRNA Length = 5836 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1682 ccctgctgctgctgctcttcctcttc 1707
>ref|XM_851607.1| PREDICTED: Canis familiaris similar to Voltage-dependent L-type calcium channel alpha-1S subunit (Voltage-gated calcium channel alpha subunit Cav1.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 3, skeletal muscle), transcript variant 3 (LOC490244), mRNA Length = 5860 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1682 ccctgctgctgctgctcttcctcttc 1707
>dbj|AK124991.1| Homo sapiens cDNA FLJ43001 fis, clone BRTHA2012562 Length = 2939 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 1142 atgccatccatggcagcatccc 1121
>gb|AY319303.1| Oncorhynchus mykiss neuroendocrine-type voltage-gated calcium channel subunit Cav1.3 mRNA, complete cds Length = 7704 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 2334 ccctgctgctgctgctcttcctcttc 2359
>ref|XM_381617.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01441.1) partial mRNA Length = 2136 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 187 cctgctgctgctcctcttcctc 208
>ref|NM_003466.3| Homo sapiens paired box gene 8 (PAX8), transcript variant PAX8A, mRNA Length = 4065 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 3738 atgccatccatggcagcatccc 3717
>ref|NM_013951.3| Homo sapiens paired box gene 8 (PAX8), transcript variant PAX8B, mRNA Length = 3876 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 3549 atgccatccatggcagcatccc 3528
>ref|NM_013953.3| Homo sapiens paired box gene 8 (PAX8), transcript variant PAX8D, mRNA Length = 3755 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 3428 atgccatccatggcagcatccc 3407
>ref|NM_013952.3| Homo sapiens paired box gene 8 (PAX8), transcript variant PAX8C, mRNA Length = 3986 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 3659 atgccatccatggcagcatccc 3638
>ref|NM_013992.3| Homo sapiens paired box gene 8 (PAX8), transcript variant PAX8E, mRNA Length = 3653 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 3326 atgccatccatggcagcatccc 3305
>gb|AC023789.8| Mus musculus chromosome 4 clone RP23-43A16, complete sequence Length = 146120 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 ctgctgctcctcttcctcttct 50 |||||||||||||||||||||| Sbjct: 59526 ctgctgctcctcttcctcttct 59505
>dbj|AK012532.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700078H01 product:CDNA FLJ10299 FIS, CLONE NT2RM2000013, MODERATELY SIMILAR TO DNA-DIRECTED RNA POLYMERASE III 128 KDA POLYPEPTIDE (EC 2.7.7.6) homolog [Homo sapiens], full insert sequence Length = 1726 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttctc 51 ||||||||||||||||||||| |||| Sbjct: 523 ctgctgctgctcctcttcctcctctc 498
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 612 acaacaacctcaccggggccatcccg 637 |||||||||||||||| ||||||||| Sbjct: 24373207 acaacaacctcaccggcgccatcccg 24373232
>ref|XM_683360.1| PREDICTED: Danio rerio similar to L-type calcium channel pore subunit isoform 1.3a (LOC559964), mRNA Length = 5391 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1814 ccctgctgctgctgctcttcctcttc 1839
>ref|XM_683135.1| PREDICTED: Danio rerio similar to CG4894-PB, isoform B (LOC559766), mRNA Length = 4810 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 582 ccctgctgctgctgctcttcctcttc 607
>ref|XM_685624.1| PREDICTED: Danio rerio similar to 2310021P13Rik protein (LOC562226), mRNA Length = 7143 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 6155 ccctgctgctcctcctcttcctcttc 6180
>ref|XM_693952.1| PREDICTED: Danio rerio similar to L-type dihydropyridine-sensitive calcium channel alpha-1f subunit (LOC570469), mRNA Length = 5841 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 2189 ccctgctgctgctgctcttcctcttc 2214
>gb|AE009936.1|AE009936 Pyrobaculum aerophilum strain IM2 section 191 of 201 of the complete genome Length = 10029 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 750 cccgcaacgccttcgacttcga 771 |||||||||||||||||||||| Sbjct: 7506 cccgcaacgccttcgacttcga 7485
>gb|AF394940.1|AF394940 Rattus norvegicus clone 12 L-type calcium channel alpha-1c subunit mRNA, complete cds, alternatively spliced Length = 6582 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2084 ccctgctgctactcctcttcctcttc 2109
>gb|AF394939.1|AF394939 Rattus norvegicus clone 5 L-type calcium channel alpha-1c subunit mRNA, complete cds, alternatively spliced Length = 6582 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2084 ccctgctgctactcctcttcctcttc 2109
>gb|AF394938.1|AF394938 Rattus norvegicus clone 15 L-type calcium channel alpha-1c subunit mRNA, complete cds, alternatively spliced Length = 6582 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2084 ccctgctgctactcctcttcctcttc 2109
>gb|AC153132.4| Mus musculus BAC clone RP24-362N19 from chromosome 13, complete sequence Length = 178970 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 tcctcttcctcttctctgttct 57 |||||||||||||||||||||| Sbjct: 142343 tcctcttcctcttctctgttct 142364
>emb|BX950190.12| Zebrafish DNA sequence from clone DKEY-190N7 in linkage group 22, complete sequence Length = 106104 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 77982 cctgctgctgctcctcttcctc 77961
>emb|X55763.1|OCCACBRE Rabbit mRNA for smooth muscle calcium channel blocker (CaCB) receptor Length = 7374 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||| |||||||||||||||||| Sbjct: 2577 ccctgctcctgctcctcttcctcttc 2602
>emb|X15539.1|OCCACHAN Rabbit mRNA for cardiac dihydropyridine-sensitive calcium channel protein Length = 7036 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||| |||||||||||||||||| Sbjct: 2239 ccctgctcctgctcctcttcctcttc 2264
>emb|AL831748.7| Zebrafish DNA sequence from clone DKEY-70P6 in linkage group 17 Contains two novel genes, a novel gene similar to human and mouse URKL1 (uridine kinase-like 1), a novel gene similar to vertebrate SYP (synaptophysin), a novel gene similar to vertebrate CACNA1 (voltage-dependent calcium channel P/Q type alpha 1 subunit), a novel pseudogene similar to human and mouse EMILIN2 (elastin microfibril interfacer 2) and a CpG island, complete sequence Length = 202357 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 170920 ccctgctgctgctgctcttcctcttc 170895
>gb|AC158681.3| Mus musculus 6 BAC RP23-338E5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202460 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 gctgctgctcctcttcctcttc 49 |||||||||||||||||||||| Sbjct: 89909 gctgctgctcctcttcctcttc 89888
>emb|AL662846.18| Mouse DNA sequence from clone RP23-399N2 on chromosome 11 Contains a zinc finger protein of the cerebellum 5 (Zic5) pseudogene, complete sequence Length = 189287 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 124036 cctgctgctgctcctcttcctc 124015 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 124086 ctgctgctgctcctcttcctc 124066
>gb|AC102496.7| Mus musculus chromosome 18, clone RP24-567O18, complete sequence Length = 139461 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttct 50 |||||||||||||||| ||||||||| Sbjct: 117308 cctgctgctgctcctcctcctcttct 117283
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 aaggcggtgctgctctccttcc 143 |||||||||||||||||||||| Sbjct: 1585369 aaggcggtgctgctctccttcc 1585348
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 12386 cctgctgctgctcctcttcctc 12365
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 156985 cctgctgctgctcctcttcctc 156964
>gb|AC016683.7| Homo sapiens BAC clone RP11-65I12 from 2, complete sequence Length = 179937 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 828 atgccatccatggcagcatccc 849 |||||||||||||||||||||| Sbjct: 53571 atgccatccatggcagcatccc 53592
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686H11 Length = 135273 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 612 acaacaacctcaccggggccatcccg 637 |||||||||||||||| ||||||||| Sbjct: 113511 acaacaacctcaccggcgccatcccg 113536
>dbj|AK110374.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C03, full insert sequence Length = 2914 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 612 acaacaacctcaccggggccatcccg 637 |||||||||||||||| ||||||||| Sbjct: 1356 acaacaacctcaccggcgccatcccg 1381
>dbj|AK072100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J21, full insert sequence Length = 1317 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 115 cctgctgctgctcctcttcctc 136
>emb|BX005201.7| Zebrafish DNA sequence from clone CH211-129C21 in linkage group 22, complete sequence Length = 184499 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 44590 cctgctgctgctcctcttcctc 44569
>gb|AF246349.1|AF246349 Acidithiobacillus ferroxidans 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase gene, partial sequence Length = 857 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 aaggcggtgctgctctccttcc 143 |||||||||||||||||||||| Sbjct: 127 aaggcggtgctgctctccttcc 148
>emb|BX072561.8| Zebrafish DNA sequence from clone CH211-157C18 in linkage group 8, complete sequence Length = 179087 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 135129 ccctgctgctgctgctcttcctcttc 135154
>emb|AL773539.18| Mouse DNA sequence from clone RP23-9F18 on chromosome 4, complete sequence Length = 182206 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ctgctgctcctcttcctcttct 50 |||||||||||||||||||||| Sbjct: 86276 ctgctgctcctcttcctcttct 86297
>gb|AC140228.3| Mus musculus BAC clone RP24-488C4 from 10, complete sequence Length = 137705 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttctc 51 ||||||||||||||||||||| |||| Sbjct: 58965 ctgctgctgctcctcttcctcctctc 58990
>emb|AL139159.10| Human DNA sequence from clone RP5-894H24 on chromosome 1 Contains the 5' end of the CACNA1S gene for calcium channel voltage-dependent L type alpha 1S subunit, the TMEM9 gene for transmembrane protein 9 and a CpG island, complete sequence Length = 132131 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 17850 ccctgctgctgctgctcttcctcttc 17825
>emb|AL844536.13| Mouse DNA sequence from clone RP23-22A15 on chromosome 2, complete sequence Length = 245993 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctc 46 |||||||||||||||||||||| Sbjct: 163785 cctgctgctgctcctcttcctc 163764
>gb|U30676.1|HSCACNLA11 Human dihydropyridine receptor alpha 1 subunit (CACNL1A3) gene, exon 12 Length = 328 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 167 ccctgctgctgctgctcttcctcttc 192
>emb|AJ251154.1|MMU251154 Mus musculus olfactory receptor cluster, OR37A, OR37B, OR37C, OR37E genes and OR37D pseudogene Length = 76099 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 ctgctgctcctcttcctcttct 50 |||||||||||||||||||||| Sbjct: 27230 ctgctgctcctcttcctcttct 27209
>ref|NM_012517.1| Rattus norvegicus calcium channel, voltage-dependent, L type, alpha 1C subunit (Cacna1c), mRNA gb|M59786.1|RATVDCCA Rat dihydropryridine-sensitive calcium channel alpha-1 subunit gene, complete cds Length = 8275 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2236 ccctgctgctactcctcttcctcttc 2261
>gb|L33798.1|HUMCACNLA Human dihydropyridine-sensitive L-type calcium channel alpha-1 subunit (CACNL1A3) mRNA, complete cds Length = 6160 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||||||||| |||||||||||| Sbjct: 1907 ccctgctgctgctgctcttcctcttc 1932
>gb|M62554.1|CYICCA1 Carp skeletal muscle calcium channel alpha-1 subunit mRNA, complete cds Length = 6103 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 ||||||| |||||||||||||||||| Sbjct: 1910 ccctgctcctgctcctcttcctcttc 1935
>gb|M67516.1|RATRBCI Rat brain calcium channel alpha-1 subunit (rbC-I) mRNA, complete cds Length = 7853 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2712 ccctgctgctactcctcttcctcttc 2737
>gb|M67515.1|RATRBCII Rat brain calcium channel alpha-1 subunit (rbC-II) mRNA, complete cds Length = 6903 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctcttc 49 |||||||||| ||||||||||||||| Sbjct: 2218 ccctgctgctactcctcttcctcttc 2243
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 cgccctgctgctgctcctcttcctc 46 ||||||||||||||||| ||||||| Sbjct: 3143844 cgccctgctgctgctccccttcctc 3143868
>emb|CR855201.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0305E08, complete sequence Length = 141830 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| Sbjct: 17766 gcaacggcctcaccggcgccatccc 17790 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 619 cctcaccggggccatcccggccgag 643 ||||||||| ||||||||||||||| Sbjct: 17773 cctcaccggcgccatcccggccgag 17797
>dbj|AK243238.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100045K06, full insert sequence Length = 3455 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||||||||| |||||| Sbjct: 2286 gcaaccgcctcaccggcggcatccc 2262
>dbj|AK243167.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100035D22, full insert sequence Length = 3782 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||| |||||||||||||||| Sbjct: 858 gcaaccgcttcaccggcgccatccc 882
>dbj|AK241418.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065161B03, full insert sequence Length = 4011 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 599 ctcgacgtgtcgcacaacaacctcaccgg 627 |||||||||||||||||| | |||||||| Sbjct: 2234 ctcgacgtgtcgcacaaccagctcaccgg 2262
>ref|NM_001076733.1| Danio rerio zgc:153375 (zgc:153375), mRNA Length = 2247 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ctgctgctcctcttcctcttc 49 ||||||||||||||||||||| Sbjct: 904 ctgctgctcctcttcctcttc 884
>ref|NM_001073880.1| Oryza sativa (japonica cultivar-group) Os12g0632900 (Os12g0632900) mRNA, complete cds Length = 3539 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 613 caacaacctcaccggggccatcccggccg 641 |||||| |||||||| ||||||||||||| Sbjct: 1106 caacaagctcaccggcgccatcccggccg 1134 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||| |||||||||||||||||| Sbjct: 1321 gcaacctcctcaccggcgccatccc 1345
>ref|NM_001070582.1| Oryza sativa (japonica cultivar-group) Os10g0114400 (Os10g0114400) mRNA, complete cds Length = 3333 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||| |||||||||||||||| Sbjct: 578 gcaaccgcttcaccggcgccatccc 602
>ref|NM_001065692.1| Oryza sativa (japonica cultivar-group) Os07g0207100 (Os07g0207100) mRNA, partial cds Length = 3427 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 613 caacaacctcaccggggccatcccg 637 ||||||||||||||| ||||||||| Sbjct: 748 caacaacctcaccggcgccatcccg 772
>ref|NM_001063543.1| Oryza sativa (japonica cultivar-group) Os06g0186300 (Os06g0186300) mRNA, complete cds Length = 2670 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 526 cctcagccgcaaccgcctcaccggcgccatccc 558 ||||||| ||||||||||| |||||| |||||| Sbjct: 471 cctcagcggcaaccgcctctccggcggcatccc 503
>ref|NM_001061303.1| Oryza sativa (japonica cultivar-group) Os05g0170300 (Os05g0170300) mRNA, complete cds Length = 3354 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||||||||| |||||| Sbjct: 1211 gcaaccgcctcaccggcggcatccc 1235
>ref|NM_001060429.1| Oryza sativa (japonica cultivar-group) Os04g0618700 (Os04g0618700) mRNA, complete cds Length = 3970 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 caaccgcctcaccggcgccatcccc 559 |||||||||| |||||||||||||| Sbjct: 1841 caaccgcctcgccggcgccatcccc 1865
>ref|NM_001059597.1| Oryza sativa (japonica cultivar-group) Os04g0472500 (Os04g0472500) mRNA, complete cds Length = 2622 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| Sbjct: 1364 gcaacggcctcaccggcgccatccc 1388 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 619 cctcaccggggccatcccggccgag 643 ||||||||| ||||||||||||||| Sbjct: 1371 cctcaccggcgccatcccggccgag 1395
>ref|NM_001056977.1| Oryza sativa (japonica cultivar-group) Os03g0436600 (Os03g0436600) mRNA, complete cds Length = 930 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||| |||||||||||| Sbjct: 404 gcaaccgcctcagcggcgccatccc 428 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 877 gctggcgttcaacgtcagctacaac 901 |||||||||| |||||||||||||| Sbjct: 790 gctggcgttcgacgtcagctacaac 814
>ref|NM_001056976.1| Oryza sativa (japonica cultivar-group) Os03g0436500 (Os03g0436500) mRNA, partial cds Length = 1973 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||| |||||||||||| Sbjct: 267 gcaaccgcctcagcggcgccatccc 243
>ref|NM_001054112.1| Oryza sativa (japonica cultivar-group) Os02g0647300 (Os02g0647300) mRNA, complete cds Length = 1345 Score = 42.1 bits (21), Expect = 4.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 456 agctcaacctctccttcaactcgctcagcggcgccatcccg 496 ||||| |||||||| |||| |||||| ||||||||||||| Sbjct: 530 agctctacctctcccgcaacgcgctcaccggcgccatcccg 570
>ref|NM_001048674.1| Oryza sativa (japonica cultivar-group) Os01g0170300 (Os01g0170300) mRNA, complete cds Length = 3354 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 599 ctcgacgtgtcgcacaacaacctcaccgg 627 |||||||||||||||||| | |||||||| Sbjct: 1921 ctcgacgtgtcgcacaaccagctcaccgg 1949
>gb|BC124334.1| Danio rerio zgc:153375, mRNA (cDNA clone MGC:153375 IMAGE:8106615), complete cds Length = 2273 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ctgctgctcctcttcctcttc 49 ||||||||||||||||||||| Sbjct: 904 ctgctgctcctcttcctcttc 884
>ref|XM_001162102.1| PREDICTED: Pan troglodytes BAI1-associated protein 2, transcript variant 1 (BAIAP2), mRNA Length = 2119 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 623 aaggagctgcagtacatcgac 643
>ref|XM_001162132.1| PREDICTED: Pan troglodytes BAI1-associated protein 2, transcript variant 2 (BAIAP2), mRNA Length = 2512 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 623 aaggagctgcagtacatcgac 643
>ref|XM_511730.2| PREDICTED: Pan troglodytes BAI1-associated protein 2, transcript variant 3 (BAIAP2), mRNA Length = 1804 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 623 aaggagctgcagtacatcgac 643
>gb|DQ896329.1| Homo sapiens clone FLH193322.01L; RZPDo839F0168D BAIAP2 mRNA, partial sequence Length = 1569 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 478 aaggagctgcagtacatcgac 498
>gb|DQ893456.1| Synthetic construct Homo sapiens clone FLH193326.01X; RZPDo839F0178D BAIAP2 mRNA, complete sequence Length = 1569 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 478 aaggagctgcagtacatcgac 498
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctcttc 49 ||||||||||| ||||||||||||| Sbjct: 10140669 cctgctgctgcccctcttcctcttc 10140693
>gb|BT027768.1| Gasterosteus aculeatus clone CNB14-A12 mRNA sequence Length = 1299 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 cctgcaggacctcttcctgca 321 ||||||||||||||||||||| Sbjct: 483 cctgcaggacctcttcctgca 503
>gb|BC014043.1| Homo sapiens similar to insulin receptor substrate protein, mRNA (cDNA clone IMAGE:3507044) Length = 3079 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 1505 aaggagctgcagtacatcgac 1525
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 571 cggcgagtccgcgggccgggacgtc 595 |||||||||||||| |||||||||| Sbjct: 1965796 cggcgagtccgcggcccgggacgtc 1965772
>dbj|AK225612.1| Homo sapiens mRNA for Splice isoform 2 of Q9UQB8 variant, clone: REC01074 Length = 2115 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 583 aaggagctgcagtacatcgac 603
>ref|XM_001070069.1| PREDICTED: Rattus norvegicus similar to eukaryotic translation initiation factor 4e 1a (LOC684368), mRNA Length = 741 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ctcctcttcctcttctctgtt 55 ||||||||||||||||||||| Sbjct: 60 ctcctcttcctcttctctgtt 40
>ref|XM_001066554.1| PREDICTED: Rattus norvegicus similar to eukaryotic translation initiation factor 4e 1a (LOC686104), mRNA Length = 741 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ctcctcttcctcttctctgtt 55 ||||||||||||||||||||| Sbjct: 60 ctcctcttcctcttctctgtt 40
>ref|XM_001080687.1| PREDICTED: Rattus norvegicus similar to hypothetical protein (predicted) (RGD1311334_predicted), mRNA Length = 6612 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 3598 gctcctcttcctcttctctgt 3578
>ref|XM_220710.4| PREDICTED: Rattus norvegicus similar to hypothetical protein (predicted) (RGD1311334_predicted), mRNA Length = 6612 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 3598 gctcctcttcctcttctctgt 3578
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 4.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 522 tcaccctcagccgcaaccgcctcaccggcgccatccccaac 562 |||||||| |||| |||||||||||| ||||| ||||||| Sbjct: 2420159 tcaccctcgaccgcgaccgcctcaccgccgccagccccaac 2420119
>ref|XM_911699.2| PREDICTED: Mus musculus WD repeat domain 81 (Wdr81), mRNA Length = 6931 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 3901 gctcctcttcctcttctctgt 3881
>ref|XM_001002633.1| PREDICTED: Mus musculus WD repeat domain 81 (Wdr81), mRNA Length = 6931 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 3901 gctcctcttcctcttctctgt 3881
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 caaccgcctcaccggcgccatcccc 559 |||||||||| |||||||||||||| Sbjct: 77013 caaccgcctcgccggcgccatcccc 76989
>gb|AC168269.3| Mus musculus BAC clone RP23-193M17 from chromosome 17, complete sequence Length = 223337 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 207502 ctgctgctgctcctcttcctc 207482
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence Length = 177167 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttc 49 ||||||||| ||||||||||||||| Sbjct: 134720 cctgctgctcctcctcttcctcttc 134696
>gb|AY374476.1| Tetraodon nigroviridis class I helical cytokine receptor member 4 (CRFA4) mRNA, complete cds Length = 2476 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 gctgctgctcctcttcctcttctct 52 ||||||||||||||||||| ||||| Sbjct: 520 gctgctgctcctcttcctcctctct 544
>gb|AC139376.3| Mus musculus BAC clone RP24-420A20 from chromosome 10, complete sequence Length = 184039 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 31916 ctgctgctgctcctcttcctc 31936
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 526 cctcagccgcaaccgcctcaccggcgccatccc 558 ||||||| ||||| |||||||||||||||||| Sbjct: 89752 cctcagcggcaacttcctcaccggcgccatccc 89784
>gb|AC102355.13| Mus musculus chromosome 5, clone RP23-120C8, complete sequence Length = 194854 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttc 49 |||||| |||||||||||||||||| Sbjct: 162976 cctgctcctgctcctcttcctcttc 162952
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||| |||||||||||||||| Sbjct: 94103 gcaaccgcttcaccggcgccatccc 94127
>gb|AC159247.2| Mus musculus BAC clone RP24-249C9 from chromosome 6, complete sequence Length = 190474 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttc 49 ||||||||| ||||||||||||||| Sbjct: 81929 cctgctgctcctcctcttcctcttc 81905
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||| |||||||||||| Sbjct: 127322 gcaaccgcctcagcggcgccatccc 127346 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 877 gctggcgttcaacgtcagctacaac 901 |||||||||| |||||||||||||| Sbjct: 128203 gctggcgttcgacgtcagctacaac 128227
>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence, complete sequence Length = 35334 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||| |||||||||||| Sbjct: 6843 gcaaccgcctcagcggcgccatccc 6867 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 877 gctggcgttcaacgtcagctacaac 901 |||||||||| |||||||||||||| Sbjct: 7724 gctggcgttcgacgtcagctacaac 7748
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||||||||| |||||| Sbjct: 41811 gcaaccgcctcaccggcggcatccc 41835
>gb|AY389548.1| Hyacinthus orientalis unknown mRNA Length = 650 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ccaacgccgagccctctagag 89 ||||||||||||||||||||| Sbjct: 260 ccaacgccgagccctctagag 280
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||| ||||||||| Sbjct: 165911 ctgctgctgctcctcctcctcttct 165887
>gb|AY253194.1| Thalassoma bifasciatum microsatellite TbAAT49 sequence Length = 335 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 276 gctcctcttcctcttctctgt 296
>gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete sequence Length = 164971 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttc 49 ||||||||||| ||||||||||||| Sbjct: 124266 cctgctgctgcccctcttcctcttc 124242
>gb|AC140300.3| Mus musculus BAC clone RP23-373O10 from chromosome 17, complete sequence Length = 189769 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 26132 ctgctgctgctcctcttcctc 26112
>gb|AC114423.16| Mus musculus chromosome 6, clone RP23-461C23, complete sequence Length = 205074 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||| ||||||||| Sbjct: 190509 ctgctgctgctcctcctcctcttct 190485
>gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosome 5, complete sequence Length = 210748 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 134755 ctgctgctgctcctcttcctc 134735
>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence Length = 173971 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 136084 ctgctgctgctcctcttcctc 136064
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 gacctcttcctgcaccacctc 328 ||||||||||||||||||||| Sbjct: 310781 gacctcttcctgcaccacctc 310801
>gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, complete sequence Length = 169618 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 56669 ctgctgctgctcctcttcctc 56649
>gb|BC032559.1| Homo sapiens BAI1-associated protein 2, mRNA (cDNA clone MGC:45218 IMAGE:5562784), complete cds Length = 2519 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 584 aaggagctgcagtacatcgac 604
>ref|NM_079626.2| Drosophila melanogaster Corazonin CG3302-RA (Crz), mRNA Length = 573 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctcttc 49 ||||||||||| ||||||||||||| Sbjct: 12 cctgctgctgcccctcttcctcttc 36
>gb|AC161456.3| Mus musculus BAC clone RP23-190H11 from chromosome 6, complete sequence Length = 208350 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 ccctgctgctgctcctcttcctctt 48 ||||||||||||||||| ||||||| Sbjct: 163520 ccctgctgctgctcctcctcctctt 163496
>gb|BC002495.2| Homo sapiens BAI1-associated protein 2, mRNA (cDNA clone IMAGE:3050508) Length = 2123 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 561 aaggagctgcagtacatcgac 581
>dbj|AK056888.1| Homo sapiens cDNA FLJ32326 fis, clone PROST2004332, highly similar to Homo sapiens mRNA for BAP2-beta protein Length = 2316 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 758 aaggagctgcagtacatcgac 778
>dbj|AK023688.1| Homo sapiens cDNA FLJ13626 fis, clone PLACE1011041, highly similar to Homo sapiens mRNA for BAP2-alpha protein Length = 2133 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 671 aaggagctgcagtacatcgac 691
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 599 ctcgacgtgtcgcacaacaacctcaccgg 627 |||||||||||| | |||||||||||||| Sbjct: 67167 ctcgacgtgtcggagaacaacctcaccgg 67195
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||| |||||||||||||||| Sbjct: 908451 gcaaccgcttcaccggcgccatccc 908427
>gb|BC014020.2| Homo sapiens BAI1-associated protein 2, mRNA (cDNA clone MGC:20295 IMAGE:4125501), complete cds Length = 2072 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 573 aaggagctgcagtacatcgac 593
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||||||||| |||||| Sbjct: 130026 gcaaccgcctcaccggcggcatccc 130050
>gb|AC008014.5| Homo sapiens 12 BAC RPCI11-66E20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167939 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 94374 ctgctgctgctcctcttcctc 94394
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 599 ctcgacgtgtcgcacaacaacctcaccgg 627 |||||||||||| | |||||||||||||| Sbjct: 124080 ctcgacgtgtcggagaacaacctcaccgg 124108
>dbj|AK172019.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830030O06 product:hypothetical G-protein beta WD-40 repeat/Trp-Asp (WD) repeats profile/Trp-Asp (WD) repeats circular profile/WD40-like containing protein, full insert sequence Length = 3090 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 245 gctcctcttcctcttctctgt 225
>emb|CT005239.3| Pan troglodytes chromosome X clone PTB-125H24 map Xq28, complete sequence Length = 262483 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 771 acctgtcaggcgtggtggtgc 791 ||||||||||||||||||||| Sbjct: 20929 acctgtcaggcgtggtggtgc 20909
>emb|CR974567.10| Mouse DNA sequence from clone RP24-316L14 on chromosome 17, complete sequence Length = 188926 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gctcctcttcctcttctctgttctc 58 ||||||||||||||||||| ||||| Sbjct: 100407 gctcctcttcctcttctctcttctc 100431
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||| |||||||||||||||| Sbjct: 27731 gcaaccgcttcaccggcgccatccc 27755
>dbj|AK039232.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330001M08 product:contactin 3, full insert sequence Length = 3549 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||| ||||||||| Sbjct: 575 ctgctgctgctcctcctcctcttct 599
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||| |||||||||||||||| Sbjct: 908451 gcaaccgcttcaccggcgccatccc 908427
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 613 caacaacctcaccggggccatcccg 637 ||||||||||||||| ||||||||| Sbjct: 5808888 caacaacctcaccggcgccatcccg 5808864
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| Sbjct: 23603428 gcaacggcctcaccggcgccatccc 23603452 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 619 cctcaccggggccatcccggccgag 643 ||||||||| ||||||||||||||| Sbjct: 23603435 cctcaccggcgccatcccggccgag 23603459 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 caaccgcctcaccggcgccatcccc 559 |||||||||| |||||||||||||| Sbjct: 31457177 caaccgcctcgccggcgccatcccc 31457153
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 456 agctcaacctctccttcaactcgctcagcggcgccatcccg 496 ||||| |||||||| |||| |||||| ||||||||||||| Sbjct: 26072128 agctctacctctcccgcaacgcgctcaccggcgccatcccg 26072088
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 599 ctcgacgtgtcgcacaacaacctcaccgg 627 |||||||||||| | |||||||||||||| Sbjct: 10408715 ctcgacgtgtcggagaacaacctcaccgg 10408743 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||| |||||||||||| Sbjct: 18215878 gcaaccgcctcagcggcgccatccc 18215902 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 877 gctggcgttcaacgtcagctacaac 901 |||||||||| |||||||||||||| Sbjct: 18216759 gctggcgttcgacgtcagctacaac 18216783
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 599 ctcgacgtgtcgcacaacaacctcaccgg 627 |||||||||||||||||| | |||||||| Sbjct: 3622443 ctcgacgtgtcgcacaaccagctcaccgg 3622471
>gb|AC098567.4| Genomic sequence for Mus musculus, clone RP23-198E6, from chromosome 17, complete sequence Length = 185277 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 20694 ctgctgctgctcctcttcctc 20714
>emb|AL513465.1|NCB13A5 Neurospora crassa DNA linkage group V BAC clone B13A5 Length = 72305 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 ggccgggacgtctacctcgac 604 ||||||||||||||||||||| Sbjct: 35480 ggccgggacgtctacctcgac 35460
>gb|AC087867.5| Genomic sequence for Mus musculus, clone RP23-183P4, complete sequence Length = 217281 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttc 49 |||||| |||||||||||||||||| Sbjct: 84450 cctgctcctgctcctcttcctcttc 84426
>dbj|AK222670.1| Homo sapiens mRNA for BAI1-associated protein 2 isoform 1 variant, clone: CBR01547 Length = 1910 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 582 aaggagctgcagtacatcgac 602
>emb|BX071411.1|CNS09R9J Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC8DG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 924 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 607 ctgctgctgctcctcttcctc 627
>gb|S74038.1| preprocorazonin [Drosophila melanogaster, Genomic, 680 nt] Length = 680 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctcttc 49 ||||||||||| ||||||||||||| Sbjct: 237 cctgctgctgcccctcttcctcttc 261
>emb|BX063465.1|CNS09L4T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC45BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 936 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 406 ctgctgctgctcctcttcctc 426
>gb|AC135862.4| Mus musculus BAC clone RP23-323B2 from chromosome 10, complete sequence Length = 203324 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 17139 ctgctgctgctcctcttcctc 17119
>gb|AC134527.5| Mus musculus BAC clone RP24-502D8 from chromosome 8, complete sequence Length = 150065 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 24 ccctgctgctgctcctcttcctcttctctgttc 56 ||||||||||||| ||| |||||||| |||||| Sbjct: 117711 ccctgctgctgctgctcctcctcttccctgttc 117679
>emb|BX021809.1|CNS08OZP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA32BD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 767 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 612 ctgctgctgctcctcttcctc 632
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 599 ctcgacgtgtcgcacaacaacctcaccgg 627 |||||||||||||||||| | |||||||| Sbjct: 30923 ctcgacgtgtcgcacaaccagctcaccgg 30951
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 635 ccggccgagttcgccgccgtg 655 ||||||||||||||||||||| Sbjct: 235327 ccggccgagttcgccgccgtg 235307
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 635 ccggccgagttcgccgccgtg 655 ||||||||||||||||||||| Sbjct: 173057 ccggccgagttcgccgccgtg 173037
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 635 ccggccgagttcgccgccgtg 655 ||||||||||||||||||||| Sbjct: 182235 ccggccgagttcgccgccgtg 182255
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 ||||| ||||||||||||||||||| Sbjct: 46109 gcaacggcctcaccggcgccatccc 46133 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 619 cctcaccggggccatcccggccgag 643 ||||||||| ||||||||||||||| Sbjct: 46116 cctcaccggcgccatcccggccgag 46140
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 caaccgcctcaccggcgccatcccc 559 |||||||||| |||||||||||||| Sbjct: 34860 caaccgcctcgccggcgccatcccc 34836
>emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on chromosome 11 Contains the 3' end of a novel gene, five novel genes, the Serpinf1 and Serpinf2 genes for serine (or cysteine) proteinase inhibitor, clade F) members 1 and 2, an H+ transporting mitochondrial F0 complex ATP synthase subunit c (subunit 9) isoform 1 (Atp5g1) pseudogene, the Prpf8 gene for pre-mRNA processing factor 8, the gene for the ortholog of human scavenger receptor class F member 1 SCARF1, the 5' end of the gene for novel protein similar to solute carrier family 43 member 1 Slc43a1 and seven CpG islands, complete sequence Length = 205633 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 95841 gctcctcttcctcttctctgt 95861
>emb|AL078630.1|MM573K1 Mouse DNA sequence from clone CT7-BM573K1 on chromosome 17 Contains the gene for gamma-aminobutyric acid (GABA) B receptor 1, five genes for novel 7 transmembrane receptor (rhodopsin family) (olfactory receptor LIKE) proteins, the gene for a novel Ulp1 protease family member, a Ulp1 protease family pseudogene, a novel pseudogene, a Von Hippel-Lindau disease tumor suppressor (VHL) pseudogene, a 7 transmembrane receptor (rhodopsin family) (olfactory receptor LIKE) pseudogene, the gene for diubiquitin and three CpG islands, complete sequence Length = 154614 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gctcctcttcctcttctctgttctc 58 ||||||||||||||||||| ||||| Sbjct: 119996 gctcctcttcctcttctcttttctc 120020
>emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chromosome 11 Contains the Akap1 gene for A kinase (PRKA) anchor protein 1, complete sequence Length = 76410 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctcttct 50 |||||||||||||||||| |||||| Sbjct: 62404 ctgctgctgctcctcttcttcttct 62428
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 613 caacaacctcaccggggccatcccg 637 ||||||||||||||| ||||||||| Sbjct: 115916 caacaacctcaccggcgccatcccg 115892
>gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 216930 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||| ||||||||| Sbjct: 14240 ctgctgctgctcctcctcctcttct 14216
>emb|CR858603.1| Pongo pygmaeus mRNA; cDNA DKFZp470L1727 (from clone DKFZp470L1727) Length = 1700 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 592 aaggagctgcagtacatcgac 612
>emb|AJ851891.1| Drosophila simulans Crz gene for preprocorazonin, exons 1-2 Length = 845 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctcttc 49 ||||||||||| ||||||||||||| Sbjct: 97 cctgctgctgcccctcttcctcttc 121
>emb|BX927282.4| Zebrafish DNA sequence from clone DKEY-49O11 in linkage group 5, complete sequence Length = 204699 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ctgctgctcctcttcctcttc 49 ||||||||||||||||||||| Sbjct: 200536 ctgctgctcctcttcctcttc 200516
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 526 cctcagccgcaaccgcctcaccggcgccatccc 558 ||||||| ||||||||||| |||||| |||||| Sbjct: 44718 cctcagcggcaaccgcctctccggcggcatccc 44686
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 526 cctcagccgcaaccgcctcaccggcgccatccc 558 ||||||| ||||||||||| |||||| |||||| Sbjct: 819 cctcagcggcaaccgcctctccggcggcatccc 787
>gb|AC132938.9| Homo sapiens chromosome 17, clone RP13-20L14, complete sequence Length = 154252 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttc 49 |||||||||||||||| |||||||| Sbjct: 36879 cctgctgctgctcctcctcctcttc 36855
>gb|AC124287.10| Homo sapiens chromosome 17, clone RP13-991F5, complete sequence Length = 162180 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctcttc 49 |||||||||||||||| |||||||| Sbjct: 52588 cctgctgctgctcctcctcctcttc 52612
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 478 gctcagcggcgccatcccggtgtcg 502 ||||||||||| ||||||||||||| Sbjct: 116310 gctcagcggcgacatcccggtgtcg 116334
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 42.1 bits (21), Expect = 4.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 456 agctcaacctctccttcaactcgctcagcggcgccatcccg 496 ||||| |||||||| |||| |||||| ||||||||||||| Sbjct: 79574 agctctacctctcccgcaacgcgctcaccggcgccatcccg 79534
>dbj|AK131146.1| Mus musculus premature mRNA for mFLJ00182 protein Length = 3446 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gctcctcttcctcttctctgt 54 ||||||||||||||||||||| Sbjct: 479 gctcctcttcctcttctctgt 459
>dbj|AK120799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H18, full insert sequence Length = 3973 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 caaccgcctcaccggcgccatcccc 559 |||||||||| |||||||||||||| Sbjct: 1843 caaccgcctcgccggcgccatcccc 1867
>dbj|AK111823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048C13, full insert sequence Length = 3430 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 613 caacaacctcaccggggccatcccg 637 ||||||||||||||| ||||||||| Sbjct: 750 caacaacctcaccggcgccatcccg 774
>dbj|AB016287.2| Cavia porcellus mRNA for L-type calcium channel alpha 1 subunit, complete cds Length = 6569 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctctt 48 ||||||| ||||||||||||||||| Sbjct: 2048 ccctgctcctgctcctcttcctctt 2072
>ref|XM_956340.1| Neurospora crassa OR74A hypothetical protein ( (AL513465) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU01347.1) partial mRNA Length = 1155 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 584 ggccgggacgtctacctcgac 604 ||||||||||||||||||||| Sbjct: 214 ggccgggacgtctacctcgac 234
>dbj|AK109613.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G09, full insert sequence Length = 1345 Score = 42.1 bits (21), Expect = 4.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 456 agctcaacctctccttcaactcgctcagcggcgccatcccg 496 ||||| |||||||| |||| |||||| ||||||||||||| Sbjct: 530 agctctacctctcccgcaacgcgctcaccggcgccatcccg 570
>dbj|AK071957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082M02, full insert sequence Length = 3542 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 613 caacaacctcaccggggccatcccggccg 641 |||||| |||||||| ||||||||||||| Sbjct: 1109 caacaagctcaccggcgccatcccggccg 1137 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||| |||||||||||||||||| Sbjct: 1324 gcaacctcctcaccggcgccatccc 1348
>dbj|AK070610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G14, full insert sequence Length = 1975 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||||||||| |||||||||||| Sbjct: 268 gcaaccgcctcagcggcgccatccc 244
>ref|XM_321694.2| Anopheles gambiae str. PEST ENSANGP00000015834 (ENSANGG00000013345), partial mRNA Length = 420 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 219 ctgctgctgctcctcttcctc 199
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttct 50 |||||||| |||||||||||||||| Sbjct: 164212 ctgctgcttctcctcttcctcttct 164188
>emb|AL732536.5|CNS08C9B Oryza sativa chromosome 12, . BAC OJ1111_F12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115351 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 83376 ctgctgctgctcctcttcctc 83396
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 613 caacaacctcaccggggccatcccggccg 641 |||||| |||||||| ||||||||||||| Sbjct: 98629 caacaagctcaccggcgccatcccggccg 98657 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 gcaaccgcctcaccggcgccatccc 558 |||||| |||||||||||||||||| Sbjct: 98844 gcaacctcctcaccggcgccatccc 98868
>gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, complete sequence Length = 192485 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 125832 ctgctgctgctcctcttcctc 125812
>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence Length = 218935 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctgctgctgctcctcttcctc 46 ||||||||||||||||||||| Sbjct: 174642 ctgctgctgctcctcttcctc 174662
>gb|U70669.1|HSU70669 Human Fas-ligand associated factor 3 mRNA, partial cds Length = 1078 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 aaggagctgcagtacatcgac 745 ||||||||||||||||||||| Sbjct: 571 aaggagctgcagtacatcgac 591
>emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chromosome 4, complete sequence Length = 218691 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 ctgctgctgctcctcttcctcttct 50 ||||||||||||||| ||||||||| Sbjct: 188784 ctgctgctgctcctcctcctcttct 188760
>gb|AC121990.3| Mus musculus BAC clone RP24-298L8 from chromosome 6, complete sequence Length = 173629 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 ccctgctgctgctcctcttcctctt 48 ||||||||||||||||| ||||||| Sbjct: 142541 ccctgctgctgctcctcctcctctt 142565
>emb|AL589692.10| Mouse DNA sequence from clone RP23-385C21 on chromosome 15, complete sequence Length = 180223 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 cctgctgctgctcctcttcctcttc 49 |||||| |||||||||||||||||| Sbjct: 6175 cctgctcctgctcctcttcctcttc 6151
>emb|AL583893.17| Mouse DNA sequence from clone RP23-189A18 on chromosome 15, complete sequence Length = 184558 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 cctgctgctgctcctcttcctcttc 49 |||||| |||||||||||||||||| Sbjct: 80819 cctgctcctgctcctcttcctcttc 80843 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 164,786,826 Number of extensions: 10068248 Number of successful extensions: 295009 Number of sequences better than 10.0: 256 Number of HSP's gapped: 295000 Number of HSP's successfully gapped: 356 Length of query: 1147 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1124 Effective length of database: 18,503,978,556 Effective search space: 20798471896944 Effective search space used: 20798471896944 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)